TCONS_00014132 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014132
Unique NameTCONS_00014132
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3030

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014132 ID=TCONS_00014132|Name=TCONS_00014132|organism=Clytia hemisphaerica|type=transcript|length=3030bp
attttgtcttttagGGACTCAAACATATGTCCAATCGACCATGAAGTTAT
TGAGCTAGACGGCACTTATCCAGATAGAGCAAAACAACGAGAGATTCTTA
TGCTGGCATGCTTTTGCCCAAATGCAAAGTTTGGATGTGGCTGGCAAGGA
TCCGTCAAACTGTTAGAGGATCACAATGCAGTATGTCAATTCGGTCCAAC
AGAATGTGTCTTTTGTTCCAAGAAATTTCCTCCCAGCGAAATGGAACAAC
ATCAGAAACAATGTGTTCTGGCAATGAGCAACATGGCATGTCCTTATGCA
CACGCTGGATGTCAATTTCAGGTTTCCGAATTCGAGTCAGTGGATGAGCA
CATCACAAGAAATGCTTTACTTCATGCCAAAATGTTTTCCGAACATTACA
AAGCAAACGAAACTAAGCACCAGCAAGAAAAAACTGATATGGTTAACCAG
ATCAAAGGATTACAACTCGAGTTGCATTCaactaaagaaaaatttacaCA
AACTACTCGACAAATGCAGCAAgagtttgaaaacaaaattgaagagtttc
aaaaagttttgcagGTCAAATTATCAGAGGTGGAGGCTATTAAAGCCCGA
GGCCCAAGCGGTGGCGATGGCACAGTCATGAGTGCGGAGATGTCGTCTGG
CATTCACAAAGAGATAAAGAAGACACGCGATGACGTCACACAAATGAACA
AGACTGTCAGCAACATCACCCACAATCTCGCCGACGTCGACTTACGTCAT
CAGCTCCACGAAAACACGACATTCGACGGACATATGATTTGGAAGATCGA
CAATTTTGAAACGCGATACCAGCAAGCGGTAATTGGAAAAACAACAGCTT
TACACAGTGCACCTTCATTCACCTCTCGATATGGGTACAAATTCTGCGCA
CGACTCTACCTGAACGGTGACGGAATGGGTAAAGGCACCCATGTGTCGCT
TTTCTTTGTCCTAATGAAATCTGAGTTCGATACTCTGTTAGAATGGCCTT
TTAACAAGAAAGTTACTTTCACTTTAATCAATCAGGAAAACCAAGAAAGG
AATGTTGTGGAAACGTTCAATGCTGATGTTAACTCCTCAAGTTTCAAGAA
ACCGACCAAACACATGAATATCGCATCAGGATGCCCTTATTTTGTTTCGC
AGGAAAAACTGAAGAAGCCAAACTCGGGTTTTATCAAGGATGGATGCTTT
TTTTTAGAGATAAAGCTCAAGTAAATGCTGGTAAACTTAACCCAGAATCA
CGAAATGTAGTTTGTAAAATAACGCCAGTTCACTCTGAAAGATTTACAGG
ACTTAGAACAAAAGACAATCAGAACCTGCCATTGCCACATATGTTCCTGC
AGATCTTCATTTTATTACCAAACAGATATGAAGTCGGTTCGAACTTCACG
GAGATTTTCACCTACCTTGCTACCCAGGAGAATTGGCGTCAACACACAAA
CTTATGTTAACTTTATATCTTCAGTTACATTAAAACCGTACACTCCTCGG
ATATCAAAGTCAttgaaaattaaccaaaaatattggaGTTGTACATTCTT
ACCACAACATTacatttcaaagtttgattgtCCTTCGATTACACTACATT
ATATCAACGCTGTGAATCGACTTAACCGAAAAACGCACAAACTAATGTCA
TGTAAAGATGTTTCGAGTCCTGATCTGGTAGATTTACACTATATAACACA
TCGATCCAAATCTTTAAATCTTACGAAAAATAGTTCGAAGATAGATATGA
AAACCATGATACAAGAACCTCAAGCAACACTTAAGGCTTTAGAAATATGG
AGCACGTGTGCTAGCTATGTTAGAAAGCCGTCACTCTTATCATCGGCGTC
AATACCGTCACTATCAACGGCGAAATTGAAGCCCTGGTATTCTATTCACT
CAAATCCATCCTATGATAAAACCCAAAACCCTGAGTCTTCAAACATTTCA
CAACAGAAATCCGCCGCCAACGCGCAAATTGATGTCGTATTTTCAAAACC
ATTGACAAAAGAAGATTTTACATCAACCGTTATCTTCACTATGAACACAT
TGAAAGATTTCTTACTCTTCTCGGAGATGACCCagagttttcaaaaactt
acaaTGGTGAACTCGAcaatttattattgttttaaTTCAATACTTGTTCA
AAGAACGATTAatttgtttttcataaaaactaCAACACAACGATCTACAA
AATCGTTGGAAAGTTCATCATGCACCAGAAACAGTAATACCACTCTCATC
TATGACCATTATATGGGAAAAAAGTTATTATGCTTTGCTATTATGACATG
CCTCTCGCCAGACTGTCAAAAAGTAGAATATATTTTGTGTTTCATGAATG
GTCAACTATTGCTTAAAGTTCGTAATGGTGTTATGTGGACAAGAAAAACT
CTTCTTGGTAATGATTCGATATTGGATTTGCTGAAAGTTTGTAATGGTGT
AATGTGGAATAGAAAAACACTTCTTGGTAATGATTCGATGGTGGATCGAG
TAACTTATGGCATGTCCAAAAAGGACGTACGTTTGGTGCAGAAATTTGGG
GACCTTAGACATGGTCATTTATGCGTCAAAGGAAGCGTATTAGGATGTAG
ATTTCAGAACTGCCTGTTAATAGaattaattttttgtcttttttgagaaa
ttagggAAAAAGTGctttatgacgtcattgatgATGATTTGAATGTCTCg
aaaagtatttatcaaaagatTATGAAATGAttatgttattttgattttat
tcctATTTTGATCGTTAGTTTTTGAGATATTCAAATTATGTCGTCATAAA
TTACTTTTTCCTGAATttgttaaaaaagtcaaaaaatttattctaTTAAC
AGGCAGTTCTGAAATCAACATgctaatacgcttcttttgacgtATAAATG
ACCATGCCTAAGGCCCCCAATTTTCTGCGCCAAAATTATGTTCATTTTGG
ACACCAAAGAATTCATTTTTTCTTACCCGGTTCATAGACGGACTGAATTC
TCTTGtaaaataataatgataatgataANN
Run BLAST on NCBI

transcript from alignment at sc0000181:87934..104732-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014132 ID=TCONS_00014132|Name=TCONS_00014132|organism=Clytia hemisphaerica|type=transcript|length=16799bp|location=Sequence derived from alignment at sc0000181:87934..104732- (Clytia hemisphaerica)
ATTTTGTCTTTTAGGGACTCAAACATATGTCCAATCGACCATGAAGTTAT
TGAGCTAGACGGCACTTATCCAGATAGAGCAAAACAACGAGAGATTCTTA
TGCTGGCATGCTTTTGCCCAAATGCAAAGTTTGGATGTGGCTGGCAAGGA
TCCGTCAAACTGTTAGAGGTATTTTCTTACTTAAAATTTTCTTTTACTAT
AAGGTTTTTATGCTTTGTTATGAGACTCTGATTAAAAAAAATCGAATTTT
CTTGAAAAGCATGTTACACAATCCCAACACAAATGCACCTTTATAAATTT
TGAAATGTAATTTGATACCCAATGAATACTAAAACAGGCTCTGTAAAATA
TACAAAACTCAAAAAGAAGTATTACATTGTCTTCATATGTTTAAGACAGT
TTAATACTTTTAGGTAAAAAAGAATCTTTCAATTTTAATTAAGCCACGTG
AAGATATATCGNTTTGTTATGAGACTCTGATTAAAAAAAATCGAATTTTC
TTGAAAAGCATGTTACACAATCCCAACACAAATGCACCTTTATAAATTTT
GAAATGTAATTTGATACCCAATGAATACTAAAACAGGCTCTGTAAAATAT
ACAAAACTCAAAAAGAAGTATTACATTGTCTTCATATGTTTAAGACAGTT
TAATACTTTTAGGTAAAAAAGAATCTTTCAATTTTAATTAAGCCACGTGA
AGCTATATCGTAATAATATGGCGAGCTTTCCAAAAGTACCAAATTTAACT
TTTTTGTGGATTATAATAGCAAAATATTTGATTTCTGATCTTAAAAGTTA
ACATTTTCCGCCTAAAATATTATTTGCTGCTAACTTGCGCCACGGCTGAA
TTGGCAACTCTGGTCAGAATCAATAGTTTTATTAAAAAGGCCCTAACTTA
ATTCATTCTGCTAATGAATCATGAATCTTTCGGTAATTTTGCCAAATTAA
ATCTAAATGTAGATAGGGAATGATTACTTTTGCATTATGCTCGATGGGAG
CTTTCCCCTCTTGAGTAATTGTTATATATCTAGAATGTACTGAAAAAAGA
TTGTTAATATCAAAACAACCCGGTTCGTTTTTAAAAGGTTCGTCCTATTG
CCGCGGGTAAAAATGAAGGCTTATCGTATAAATTTAAGATATTTAAATAG
ATATCGATGCCAACCAAATATCTTTTAATATGTTGCTCGTTGCATATTCT
TGCTAGGGAGGGGGTTTATCTAAAGAATCCTGTATTGCTAAAAATAGACA
AAAAGAACGACAAATTTCACAAAAAACGACATATTTCGCCGTCCACAACC
CCGACCGAAAGTGACTGTACCACCCTGTCATTCCCCTTCGTTTATCACGG
GAATTAACTACATGTGGTCTAAAAGAACGACAAATTACGCATGCGTGTTA
CAATGCAGGATCCTTTAGAGGAACAGACTGTAGGCTACAAATTAAAAAAA
CTTGAAATGAATTTTCAGCTAAAAACTATACTAGTAAAACTCTCACATGT
TAACAATGGAATTATAATTAGAAAAGGAACTCCTTCAAACTTCCCCTTTT
ATTTTTTGAGAAGACTGGGTAAATTCAAACTGACTCTAAATTCAATTTAA
TAATTTGCCATTAAACTATTTTTATCCTTCCTCCTTGAAAAAACATAGAA
AAGATTATACAGAATTACTAAATCTTTCACAGCTTAAAAAATAGTGCGAA
CGAGGTCAAAACCCGTGCCCCTTTGATACATTGTTGAAATTCCTTTGTGG
TTATTAGATGATGAGAACTTAGCGTCATTAATAATGAAATTCATGCTTTT
GTTTAAAAGAACATTTTTATAGATCTGCTGATTGTCAAAAATTATTGCAA
TTACTATTTCAAGCAGATATGGGGCTAGAATCCTGAAAATATGCACCTGA
CATCCCTCTGTACCGATAAAGATGAGAAAATTTGCCGAGTTCTAAAAGTA
ACCGAAAGGTTTTTACAAAAAAATTAATCAATATCATGTTCACATAACAT
GTGCATTTTAATCACGTGCCACTTATCTGATAAAGGCGTTATCGCATTCT
CCATTGCCAACTCATTCCCTTTTGAAGTTCATTGTACCGAGTAAAGGTAA
AACAATGTAATTCAAAGCTCATCTAATTATATTCAAAAGGATATTTATTT
AATTTAGTAGACAAAACCTAAAAATCCATTACAATACGACACTCATTGAA
ATATCCACAGTCGACAAATATCCAAGAATTGACTTAATACAGTATAGCAA
AATACCCTTGGATTTCTTTCAGACGTCACAACAGAAACTCTATATCAACC
ATTCTTGCATTGGCCCTTTTTACACAACTGCCTTAAAAAACGTTACCCCT
ATAAAAATAAGGGCTACAAACAGCACAAAAACTTGCTACTGTGAGAAGTA
ATTGAGTCTGTATTCTGCTCTAGAATGTAAATCGAATGGCGAAGTGTAGT
GTCACACCTACAATCAGCTCCTAGTTTTTTTAACTGCCAAAACAGTTAGT
AAGCAATATTAATCAAGCTAACTTTTGTAGAATGCAAAATCTTGGGATAT
GCCACTGTTCATTACTACTCTCAACTATCCCTAAAAAAATTAATGAGAGT
AGATTTTCCAGGATTCCAATATTTAGTTCGAATCAGCTAGAACCAACTGT
GTATCTTTTTGTGAATGAAAAATGGAAAATGTTTTGATGTTAGTTTCACT
ACTGCTACTTTTGTGGAGGAATTTGTAAATGGGCTTCTTCGTACCTATTT
AGAAATGCTTACATTAATCAGGTCACTAGTTTGAACCAATTTTGTCCAAT
CTGGCCCTCCTTTTGGTTTGTTCTGTCATCTTTGTGAGTTTGCGAGGAGA
GGTGAAAATGATCGATAAAGACTCAGCAAATCGGATCACAGATGATCTTC
TCATGGGAAATAAATCCTTCAATTTGATAAAGACTTGGTCCCATTTTACC
AGATCGTTACCAAAATGTAGCTGAAATTTCCATACATGCTATCTATTGCG
TAATCTTTTTGAAAATGAGAACCCCTGCAAAAATATAAGGCGCGTATTCA
TTATTCTTTGATGATGGAATATAATTTAATCGAGCTCATCCGCGGAATTT
GCTGTTAACTTTCCTGCGAAAAAAAAATAATATATGCATTACGATCAATG
GTATTTACCCTTAATTTGAATCCAAGAGTTTTTGAACTTTAAAAGATTAC
ATCATGGATCCCATACATTGAGAACTCTGATGATGAATCCCATGTGTGAG
GAGGAATGAGGAGAAAAAGGAGAAAAAGAGAAGTTAAATGCGGGGTAAGT
TAAGTGGTTTACAAATACTGTTTGAATTCTTATGTGAAAGCGTAAAAAGC
ATAGCAGATTCAAAGTGTGAACAAATATGTTCTTATTTACGAGGCTGTTA
ATTTGTGTGGTCGAGAAAGGGAACCAGTCACAATAACAGAAATATGGAAA
AGTTTCAAATAATCTTCTATCTTAGAACGCGTACTATTTACTTCAATATT
TGAAAAATTAAAGTCTATAGTCGTTTGGGAGAACAAGACGACCTATTAAA
TAACAAATTACTCCAGACAGTAAAGTGGTATAAGATAACTTATCTTGTAC
CCAGGTAACAGCTGTGTTGTACACTTCTGCTGGAGTAATTAGTTATTCAA
AAGACCGTCGCGTTCTCCCAAACGACCAATCGCTCTAAGTGAGATATAAT
ATATCATTTAGATTTCACTGCTTAAGATTGCTCGTTAATAATACATGGCC
CCTAAAATCCCTTTTCTAGCTAAATACAACGATAAAGTTTTATCTATTAC
CCATTACTAGTTTGAAATTAGGGGAATTATATATTATTACTTCAACCATC
TTTTTGCGAAGAACCTTAGTATATTTTAATATGTTCTTGTCTCACAAACA
TTTGTTTGTTATAGTCATTAAAAGTGTTTTCCATCTTTTAGGGAGTCGAC
GTCGACGATTAAACAATGTTTGATGCTACGGCGGTAAACTTAAAGTTGTT
GGAAACTTGGTGTCACCATAGCAACTGAAAACAATCAGAAAATTTGTAAA
CAAACGAAATCAATTTTAAGCAAAGCGAAAATTGGACCACGATTGGTTAT
TCAAGATTCAGCTATCAAGAAAGGAATTTTAAATCAATCCCCTATGGAAA
ATGGAGCGAAATTTCGAAAGGAGTTATCTACTTGACACTGGGTAAACCGT
CCCTTGTCTGGGGCGCCCAAGGGTCGCCCTCTAACGAAGTTGTGCTTGAA
AACATACAATTCTCAACTTTGATCTTTCAGACTTTTTTACCGTTCCTAAT
CCAGAGCGCTGAATTTTATTTTTCCGTTTTTTGGTTGCTTGTACGTTATC
ACTGGTTCTAGTAGTATAAAAACTTGTTCTACCGAATGAAGTATTTTGTT
CATTTGATCCTATGGGAATATTGGACAAGAAAAGGAGTTGGGAAGTTTAC
GAATTTTGCAAAGAATCCATATTTTGTACAGGGTCCAGCTTCCGCACTTC
ACCAAGTGATACAGACAACTTATTGTTATATTGGCCGAAACGACAGCCAG
CTCTAACATCCCGACGAACGACAGTGGTGGAAACTCGCCCGCATCGTCCC
TGCCTGCTTCTTGATCTGTTTTTGGTTGTACACCGAACTGTGCGCTGATT
TGGATAATTCTGGCGTTAAGCGTTTTGTTTCCATTACCATTACTTCTCTT
AAGTCACAAGAGAAACTTTTTTTACGGTCTCCCAACTCCTTTGGTGAGAA
TGATCAATGAAATGTTTTGCTCCTATCTTCAGTGGCAAACATTTCGAAAA
CTATCCTGCATCATTGCACTGGTCTACTAAAATTCATATTCTCGTCACAA
GTTCGTCATTTTGAATTCATCGAAGTTGCTATATGGTGAGTTCGGTCAGC
TTCAACCATCATATAACTGGAAAGGAAATATTTCTACCAAAATCAAATGT
TGACTTCAACCTTATTTCAGGATTATTGAGGTGTCTTATTGGTTTTCGGC
TTCCAAAAAGCACTTTTTTTGATAGACAGTCTTTTTGCAAATATTTTAAT
GGGATAAATTTTCGCGGGGATTAAACTCGTGGATTTCGTGGATTTGGGTA
TCATCCGCGAAATTAAGCCCCAATGAAGATTTGGAAAGGTCGTATACGAA
ATAATACTATAAAAAGTTCTTTTGAACACAACTCAAAAAATGATAGATAA
TTTCTTTTAAAATGTTAACTGGCATCAAAGAACCGCTAATAATGTGTATT
TCGACAACTACTCTCGGGTACCTAATAGCTGTCCCCGCCCCCTTGCTAAT
TAATTTTTCGAAAGTTTCCTCTTTTGTCCTAATTCTGCTGTATTAGCAGG
TATTAGCCTCCTTTTCAGGGTCAAGATGATTTTACAAGAATTTTTGTCAT
TGGATTGGTCGTTAACTATTCAAACAAAAACTTTTATTATATTTTTCTAA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCGCTTATTTCAAAC
CCCCCCGGCTATTAGGTACCCGAGAGTAGGATGTATAATTTGGCAGTATA
AAGATATAAAACCATAAAAATATTGACTCCTAATAATGGCATCCGTGAAA
TTAAGTCCCCGCGAAATCATAAAATTTTGCGGATGAGTCCAACCGTAAAA
TTTAATCCTGCGAAAATTAATCCCATTAAAGTAGCTGGATGTAGCACTGG
CAAGGTTCTAGAACAATTGCCCCAAAAAATTGAAGATTTAAAGGAGTCAC
AAACAGTACGAACAGTCCAAAAGTTTATTGATTCTCATAAAGAAGACATT
TTCTACAAAATTGAGCCTGGTCACACTCTTCTGATTTCCCTTCCGAAAAC
AAAGGTTCGAGCCACGGCACAAGATCATCCGAAACGAAAAGAATTTCTCA
CTTCGAGATTATGTGAGGATTTTTCTCAGCTCGCTTTGAACATTATTTAC
AGTTTTGATGATCCCGATGCTCAAGTCGATAAACGCTTTAACACGCTAAT
TACTAACTGCTTATCCAGACACGCTCCAGAGAAACGGGTTAAGCTTACAC
GTCCCCCTGCTCCGTGGATGCAAGATCCTGATATTGTCCGATCTAGAAAC
CATTTAGAAGACCTTCGAAAAAAGAAAAGTCGCCGAATCAGATGATTGAG
AGATGAATACCGAAAGGTCAAAAACAGTCACAAAATAATGTTCTTATCGC
TCAGCCGGTCAGCGACTACATCACATCGCCCCTCGTTCACATCATCAACA
ACTCAATTAAAACCGGTATCTTCCCGGACAAGTGTCTGCCCTATCCTGAA
GGTGAGAAATCCTGCGGTTGCAAAGGACTTTCGACCTGTTTCTATTCTAC
ATTTACTACCAAAGGATTTCAAAAAAATCATTCTCATGCAGATCCTTGAT
CACATCGAGTCAGGAAGTCATCGAAACCCCGTCAAATTCAAATATCGGAG
AATGTTATATCCTTTGAAAGGGATCTCACGGAACTATCGAGATGGTACAC
CAATAATAGTCTAATATTCAAGGACGACGAACTTCAAATGATAGTATTTC
ACAAACCAAGACCCCTCCCTACTTACCGATCCTACCTTGTTCGATCAAAA
AATTGTCACTCTATTAAACAGGAGTTAACGGTAAGTCTTTTGGGGGACAT
GATCGACCAAAACCTTACATGGATAGATCAAATCAATCACGTAACAAAAT
TTGCTCAGTCTTATCTTCAAGTGTTGAAGCAATTTCAACGATTTACACCT
TTCAACGTCAGGAAAACGCTGGCAGAGTCGCTAGTCCTGTCTAAAGTGAA
CTACTGAAATACTGTATACTCTTGGACACAGTACATGAAGAAAAAGTTAC
AGCGAATTCAAAATTGTGCTGCTGGCTACCTGCTCAGGAAATTCGCCCAC
CGTAAAGATGTCGTCAACCTTGACTAGTTGCTGGTCGAAGTTGAAATGGA
TCTGGCTGTGGCAGGCTTTAAAGTGCTCATTGATAAAAACTGGCCATCAT
ATTTTTCGATGCCACGTCCCTAACCAGTTAGAGGTTTGAGAATAAATGAT
GTCGGTATTACTATTGAAAATGGTGAAAATGGTTCCTTTCAGGAACAAAT
TGTAATGGTNCCGAAGAGTGCAAAAAGTGGTAATAGTGCAATTAACGATT
AATCGCACTCCTCTAAACCAATCAGATTCGAGTAATTTTGCACGGCTGAC
GATTACTATTGAAAATGGTGAAAATGGTTCCTTTCAGGAACAAATTGTAA
TGGTGTTTTAATGACCTTCCCAGACCTCTGAGGGAGGAAAAATCTGTAAA
GATCTTTTATAAGAATTTGAAAAAATATTTCTTAGATACATAGATCATTA
GCAGCAACTTTAGCTTAAATTTATTCACCTGACCAACATAATCTTTTCTC
GCGAGTGTATTCAAGTTCTCTAATTTTCAATCACCTTTCATTGTTACAAA
TTTTCTCATTCTCCAATTTTCAAAACAATATATTTAAAAGTTAAAATTTA
TTTTAATTTCTAAAAAATATTTATTTTTATTTTATTTAATGACTTCTTTG
TTTCTGCGCTCGAGTATGTCCTCCGTTTCCCAAAGCCAATTCTAGCCAAT
CCACGCCTGATCCGGTCGGATATCCATAATCTTTTTTTTTTCCAGTTTAT
CTGAGCTCAAGCCATCTCTACATTAAAAGCACATAGAGTAATATTTAGAT
TATGCTAGGTTACTATATTTAGTATAAAGTATTTTTTTATTTATGAACTA
GAGTTAAATTTGAACAATTTTCTAAGCCCCTTCCAGTTCTATCTTGCTTT
CATAATTTCGCAATTACTCTATCGTTTCTGCGACAATTGTCTCGTATTTT
GGTCGATTTTCCGACAAATTTGTTTTGTTTTATAAATTAAGTTTTTTTTA
GATGTTATTTATTTATTTATATTTTTAAGTATTTTAATAGGGATAAGAAC
CGTAGTATAATATGGAACTCGAAGTATGTTTAAAAACAAAAAAACAAGCA
AAATCAAAACGCCTAGATTATTTTTTTTTCTGCAAAGGCTACCTATCTTT
TTTGATAATATTCCACTCCGGATTATCTTTTTTAACGAGCACAAAATCGC
TACTTAATTCAAATTCTATCAAAAGTTATTGAGGTTTGAAAAAACACTGC
CCGCTAATTTGAAATAGACTTTAGTGTACTATGAATTAACGAATAAGATA
AAACTTCTGCAAAAGGGTTACTCAAATCAATACACTTGACCTGTCCCAAC
TGCCATAATCCCTGAACATAACTCTGTGTGTATCTTTAAAATNTCAAATC
AACACACTTGACCTGTCCCAACTAACATAATCCCTGAACATAACTCTGTG
TGTATCTTTAAAAAATCATTTCATTCTAGGATCACAATGCAGTATGTCAA
TTCGGTCCAACAGAATGTGTCTTTTGTTCCAAGAAATTTCCTCCCAGCGA
AATGGAACAACATCAGAAACAATGTGTTCTGGCAATGAGCAACATGGCAT
GTCCTTATGCACACGCTGGATGTCAATTTCAGGTAAATTAACAAGGCTTG
ATTTTCAAGATCATCAAAATTCAGTGGTTTATGGTTGATCAGAAACGGTG
TTTGTTTGTGGCTGCCATATTGAAATCAAGTTTTACTTTCCAGCTATGTG
GTATGCTAACCAGGCTGTCCAAATAGAATACACGCTTTTTTTATAAGAAT
AACTTCAGGGTGAGTACAACCAAACTAGCCAAAATACATTATTGTTATAA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAACGCGCGCGCGCAAAGA
TTCGAGATTCCTGTCCAATATCCTTGCGTGAAGCTATGAAGGCCTCCTCA
CTCGCTACGCTCGTTGCGGGGGCAAAAAGTGTGTATTAGTCTTCAATTTG
ATAAACACTTCGACTTCGTCATTAAAACTATCAATTAACATTGTTGGAAA
GGTTTATGGATTATCAGAAACATTGGTATGATACAGTATTGTATGGACTA
TAATGGAAACCCTTTTTAATTACATGCCTCTGAAGAGACTGCTAATTTAA
AAGTAAACGGTTGTCTTTCTTCAAGTTGTGGCACCGTCGACAAGAAACAA
CTAATGTCGTTTTGCTTGCATATTCGATGTCGATTCAAGGTAAAAGGGTC
AATTAGTCGGGCGCTCTTATTACAATTTCTCCCGGGGGAGGGGGTACTAC
CCTTGTCGACCGACGGGGGTTTCTCCACTGAGGTTCTAAAAATGGACCCT
ACGTGGGACTCGAATTTTGCGAAAAAACCCTGAATAGGACTGAAATTCCA
AAATGTTCTCAAATTTTCTACTTTTTCCCCAAATTGTCCAAAAATAGGCA
CCCTACGAGGGACTGATTTTTCTATTTTGGTGTTTTTGCGACCCTACCTG
GGACTCGTGGAGGTTTCTCTGTTATTTAAGTTATTTACATTTTCACAGGT
TTCCGAATTCGAGTCAGTGGATGAGCACATCACAAGAAATGCTTTACTTC
ATGCCAAAATGTTTTCCGAACATTACAAAGCAAACGAAACTAAGCACCAG
CAAGAAAAAACTGAAATGGTTAACCAGATCAAAGGATTACAACTCGAGTT
GCATTCAACTAAAGAAAAATTTACACAAACTACTCGACAAATGCAGCAAG
AGTTTGAAAACAAAATTGACGAGTTTCAAAAAGTTTTGCAGGTCAAATTA
TCAGAGGTGGAGGCTATTAAAGCCCGAGGCGTAAGTTTCATGCTAATTTC
TTTTTCGACTAATGATTTGGTAGGAACGATGCTCGCTATGATTTATTTTT
ACGAGAAGTTTTGTGCCAGGGAGCTTTCTTGATTTTAAGTTTTATCCTCC
AACCTCAGGAGTCGTTAAATCGTAGGCTACTTTCTTTTATTCACAAGAAA
GAAGAACAAAATAGTTAGCCAAAGGATAGTTAGCCAAAGGTATCTACGAA
CGGCCTACGGGTCCGTTACACTGTCTTAGGAAAGCCTACGGGTCTTTTTT
TTTCAGCNCAACACTCTACTCGGCGGGTGCGACGCCGGGTGACGGCTAGT
GGAAACCCTTTTTAATTACATGCCTCTGGAGAGGCTGCTAATTTAAAAGT
AAACGGTCGTCTTTCTTCAAGTTGTGACACCGTCGACAAGAAACAACTAA
TGTCGTTTTGCTTGCATGTTGGATGTCAATCCAAGGTAAAAGGGTCAATT
AGTCGGGCGATCTTATTACAATTTCTCCCGGGGGAGGGGGTACTACCCTT
GTCGACCGACGGTTCTAAAAATGGACCCTACGTGGGACTCGAATTTTGCG
AAAAAACCCTGAATAGGACTGAAATTCCAAAATGTTCTCAAATTTTCTAC
TTTTTCCCCAAATTGTCCAAAAATAGGCACCCTACGAGGGACTGATTTTT
CTATTTTGGTGTTTTTGCGACCCTACCTGGGACTCGTGGAGGTTTCTCTG
TTATTTAAGTTATTTACATTTTCACAGGTTTCCGAATTCGAGTCAGTGGA
TGAGCACATCACAAGAAATGCTTTACTTCATGCCAAAATGTTTTCCGAAC
ATTACAAAGCAAACGAAACTAAGCACCAGCAAGAAAAAACTGATATGGTT
AACCAGATCAAAGGATTACAACTCGAGTTGCATTCAACTAAAGAAAAATT
TACACAAACTACTCGACAAATGCAGCAAGAGTTTGAAAACAAAATTGAAG
AGTTTCAAAAAGTTTTGCAGGTCAAATTATCAGAGGTGGAGGCTATTAAA
GCCCGAGGCGTAAGTTTCATGCTAATTTCTTTTTCGACTTATGATTTGGT
GGGAACGGCACTCGCTATGATTTATTTTTACGAGAAGTTTTGTGCCAGGA
AGCTTTCTTGATTTTAAGTTTTATCCTCGAACCTCAGGAGTCGTTAAATC
GTAGGCTACTTTCTTTTATTCACAAGAAAGATGAACGAAATACTTAGCCA
AAGGATAGTTAGCCAAAGGTATCTACGAACGGCCTACGGGTCCTTACACT
GTCTTAGGAAAGCCTACGGGTTTTTTTTTCCAGCCAAGCGGTGGCGATGG
CACAGTCATGAGTGCGGAGATGTCGTCTGGCATTCACAAAGAGATAAAGA
AGACACGCGATGACGTCACACAAATGAACAAGACTGTCAGCAACATCACC
CACAATCTCGCCGACGTCGACTTACGTCATCAGCTCCACGAAAACACGAC
ATTCGACGGACATATGATTTGGAAGATCGACAATTTTGAAACGCGATACC
AGCAAGCGGTAATTGGAAAAACAACAGCTTTACACAGTGCACCTTCATTC
ACCTCTCGATATGGGTACAAATTCTGCGCACGACTCTACCTGAACGGTGA
CGGAATGGGTAAAGGCACCCATGTGTCGCTTTTCTTTGTCCTAATGAAAT
CTGAGTTCGATACTCTGTTAGAATGGCCTTTTAACAAGAAAGTTACTTTC
ACTTTAATCAATCAGGAAAACCAAGAAAGGAATGTTGTGGAAACGTTCAA
TGCTGATGTTAACTCCTCAAGTTTCAAGAAACCGACCAAACACATGAATA
TCGCATCAGGATGCCCTTATTTTGTTTCGCAGGAAAAACTGAAGAAGCCA
AACTCGGGTTTTATCAAGGATGGATGCTTTTTTTTAGAGATAAAGCTCAA
GTAAATGCTGGTAAACTTAACCCAGAATCACGAAATGTAGTTTGTAAAAT
AACGCCAGTTCACTCTGAAAGATTTACAGGACTTAGAAGTAATAAATTTA
TATTAGACTTCATTTTTGTTATAAACTTCTTGCGGATATTTTCGTTTCCG
CAACCCTTGTACAAAATGGAATTTCAAAACTGTATTTTTTTCTGCAAAAT
TCCAAACCTTTGATCTATACAATAAACACATTGAACATTATCTTAAAAAT
TATAATCATGTTTATACCTATTATCAGCAAAAGACAATCAGAACCTGCCA
TTGCCACATATGTTCCTGCAGATCTTCATTTTATTACCAAACAGATATGA
AGTCGGTTCGAACTTCACGGAGATTTTCACCTACCTTGCTACCCAGGAGA
ATTGGCGTCAACACACAAACTTATGTTAACTTTATATCTTCAGTTACATT
AAAACCGTACACTCCTCGGATATCAAAGTCATTGAAAATTAACCAAAAAT
ATTGGAGTTGTACATTCTTACCACAACATTACATTTCAAAGTTTGATTGT
CCTTCGATTACACTACATTATATCAACGCTGTGAATCGACTTAACCGAAA
AACGCACAAACTAATGTCATGTAAAGATGTTTCGAGTCCTGATCTGGTAG
ATTTACACTATATAACACATCGATCCAAATCTTTAAATCTTACGAAAAAT
AGTTCGAAGATAGATATGAAAACCATGATACAAGAACCTCAAGCAACACT
TAAGGCTTTAGAAATATGGAGCACGTGTGCTAGCTATGTTAGAAAGCCGT
CACTCTTATCATCGGCGTCAATACCGTCACTATCAACGGCGAAATTGAAG
CCCTGGTATTCTATTCACTCAAATCCATCCTATGATAAAACCCAAAACCC
TGAGTCTTCAAACATTTCACAACAGAAATCCGCCGCCAACGCGCAAATTG
ATGTCGTATTTTCAAAACCATTGACAAAAGAAGATTTTACATCAACCGTT
ATCTTCACTATGAACACATTGAAAGATTTCTTACTCTTCTCGGAGATGAC
CCAGAGTTTTCAAAAACTTACAATGGTGAACTCGACAATTTATTATTGTT
TTAATTCAATACTTGTTCAAAGAACGATTAATTTGTTTTTCATAAAAACT
ACAACACAACGATCTACAAAATCGTTGGAAAGTTCATCATGCACCAGAAA
CAGTAATACCACTCTCATCTATGACCATTATATGGGAAAAAAGTTATTAT
GCTTTGCTATTATGACATGCCTCTCGCCAGACTGTCAAAAAGTAGAATAT
ATTTTGTGTTTCATGAATGGTCAACTATTGCTTAAAGTTCGTAATGGTGT
TATGTGGACAAGAAAAACTCTTCTTGGTAATGATTCGATATTGGATTTGC
TGAAAGTTTGTAATGGTGTAATGTGGAATAGAAAAACACTTCTTGGTAAT
GATTCGATGGTGGATCGAGTAACTTATGGCATGTCCAAAAAGGACGTACG
TTTGGTGCAGAAATTTGGGGACCTTAGACATGGTCATTTATGCGTCAAAG
GAAGCGTATTAGGATGTAGATTTCAGAACTGCCTGTTAATAGAATTAATT
TTTTGTCTTTTTTGAGAAATTAGGGAAAAAGTGCTTTATGACGTCATTGA
TGATGATTTGAATGTCTCGAAAAGTATTTATCAAAAGATTATGAAATGAT
TATGTTATTTTGATTTTATTCCTATTTTGATCGTTAGTTTTTGAGATATT
CAAATTATGTCGTCATAAATTACTTTTTCCTGAATTTGTTAAAAAAGTCA
AAAAATTTATTCTATTAACAGGCAGTTCTGAAATCAACATGCTAATACGC
TTCTTTTGACGTATAAATGACCATGCCTAAGGCCCCCAATTTTCTGCGCC
AAAATTATGTTCATTTTGGACACCAAAGAATTCATTTTTTCTTACCCGGT
TCATAGACGGACTGAATTCTCTTGTAAAATAATAATGATAATGATAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007909XLOC_007909Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014132-exon-sc0000181-1575043694:104565..104732TCONS_00014132-exon-sc0000181-1575043694:104565..104732Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1575043694:95151..95303TCONS_00014132-exon-sc0000181-1575043694:95151..95303Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1575043694:90824..91105TCONS_00014132-exon-sc0000181-1575043694:90824..91105Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1575043694:89845..90549TCONS_00014132-exon-sc0000181-1575043694:89845..90549Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1575043694:87934..89655TCONS_00014132-exon-sc0000181-1575043694:87934..89655Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1510915933:104565..104732TCONS_00014132-exon-sc0000181-1510915933:104565..104732Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1510915933:95151..95303TCONS_00014132-exon-sc0000181-1510915933:95151..95303Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1510915933:90824..91105TCONS_00014132-exon-sc0000181-1510915933:90824..91105Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1510915933:89845..90549TCONS_00014132-exon-sc0000181-1510915933:89845..90549Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1510915933:87934..89655TCONS_00014132-exon-sc0000181-1510915933:87934..89655Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1491911889:104565..104732TCONS_00014132-exon-sc0000181-1491911889:104565..104732Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1491911889:95151..95303TCONS_00014132-exon-sc0000181-1491911889:95151..95303Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1491911889:90824..91105TCONS_00014132-exon-sc0000181-1491911889:90824..91105Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1491911889:89845..90549TCONS_00014132-exon-sc0000181-1491911889:89845..90549Clytia hemisphaericaexon
TCONS_00014132-exon-sc0000181-1491911889:87934..89655TCONS_00014132-exon-sc0000181-1491911889:87934..89655Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000181supercontigsc0000181:87934..104732 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.81801	4.50103	3.85381	7.70891	1.94785	1.32279	0.0320806	0.927959	2.64556	2.56148	0.362049	0.325771	0.432807	0	0.326866	0	0	0.565962	0	0.127166	15.6035	11.6022	0	0	4.13116e-07	0
Blast
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BLAST of TCONS_00014132 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 1.380e-60
Identity = 146/478 (30.54%), Postives = 224/478 (46.86%), Query Frame = 1 
Query:   28 CPIDHEVIELDGTYPDRAKQREILMLACFCPNAKFGCGWQGSV-----------------------------KLLEDH-NAVCQFGPTECVFCSKKFP-----------------------------PSEMEQHQKQCVLAMSNMACPYAHAGCQFQVSEFESVDEHITRNALLHAKMFSEHYKANETKHQQEKTDMVNQIKGLQLELHSTKEKF---TQTTRQMQQEFENKIEEFQKVLQVKLSEVEAIKARGPSGGDGTVMSAEMSSGIHKEIKKTRDDVTQMNKTVSNITHN---------------------LADVDLRHQLHENTTFDGHMIWKIDNFETRYQQAVIGKTTALHSAPSFTSRYGYKFCARLYLNGDGMGKGTHVSLFFVLMKSEFDTLLEWPFNKKVTFTLINQENQERNVVETFNADVNSSSFKKPTKHMNIASGCPYFVSQEKLKKPNSGFIKDGCFFLEI 1212
            C    E I  D  + D   +REIL L  +C N   GC  Q  +                             K L DH    C++    C  C  + P                              SE+  H  +CV A S   C +   GC FQ +  + +  H   +A+ H  +  E   + E K    + + V + K +Q  LH+    F    +  ++M +  E+KI   Q+V+  +  +++ +             +  M S + + ++    ++  ++K+   +  N                     LAD+DLR Q+ E  +++G +IWKI +++ R Q+AV+GKT +L+S P +T  +GYK CAR+YLNGDGMGKGTH+SLFFV+M+ E+D LL WPF +KVT  L++Q +  R++ + F  D NSSSFKKPT  MNIASGCP FV+Q  L+  N  +IKD   F+++
Sbjct:   88 CTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPST--CSFKRYGCVFQGTN-QQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQ-SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSV-ESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE--NGTYIKDDTIFIKV 558
The following BLAST results are available for this feature:
BLAST of TCONS_00014132 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF31.380e-6030.54TNF receptor-associated factor 3 OS=Homo sapiens G... [more]
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