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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014192 ID=TCONS_00014192|Name=TCONS_00014192|organism=Clytia hemisphaerica|type=transcript|length=1537bp
AGATATGCAATTTTGGATACCAACTAAAAACTTGATAAGCAATCTGAGAG
AATCCAGATTGCAACCAGTTGACCTTTTATCTTTTAGCTTTTGCCACAAT
CACTCCAATTGGTTCCACATGAAGCAAAtacaataattaaaataaATACC
AATATAACACATACGATGGCGACtgtaattttcacatttttcataaacat
tGTTCTCTCAAGAGTTCTGCTTGATTTCTTAAAAGTCATGgcctaaaata
agaaaatttgtttaatgGTGATCGAATTGTAATAAATTTCTAGATAACAG
TTTAGGGTTAAAGGCATCACACACACAAATACTAGACTTTGATAAACCTC
ATTCACTTACAGAAGTACTTAGGTCATCAGTCTTTTCAACAAGAAGCTCT
AGTTTTTCTCCTCGTTGTGCTATTGAATCTGGTGAGAGGAAAAGAAATGT
GTAGGTGTGGTAAATTTATCAAACCATGTGATATACGTACATAAATGGAT
ACATACAGCTTCATGAAAACAGTTCTTTTACCAGATTTACCAAGATGTCA
AAGCTTCTATTAATACACAGAACACAATTTTGTCCATTGCTGATCATAAC
CGAGcatatttcaaattaatttcaagaaaataaagTATTACGTAAAGCTG
tacaacaaagaaaagaaagctGTTACCAATATTATTGATCATGATCCCTT
TCAATTCACTCAAATCTTCCTGTACTCTCTGCATTTTGCCAGAATCTCCT
TTCGAGAAATGTCGCTTAAatgaaaacaagctagatgctgaatggaccta
cctgatgatgaaagttagatagcaatgcgaggagaaaaatgaaaaaaatc
agtcaaattgaatcatgcttgatgatgAGCactgttatcaataatgtttt
tgtgtgaaaaacatagaaaaataagaaaaaatccaacaaaaatctgcaaa
aacggcaatttccggtattttcggcaggaaaaaaaaatttctcaaaaatc
aaactcggctatgttttgggcattgttaatacacatcttcgtgcaaaaaa
tcagaaaagactaatgataaaatctcgagaaaatgccaaaaaaacagttt
ttccggcatatttttcgaaaatcgggctctgtcacattttgggcattgcc
attttgcatcaatgtgccaaaaatcagaaaaaactaattagccaatcctg
agaaaagctggtaacagacggacggacgaacggacaaacggacggacatc
ggttaatttataggaccttcaccgGTGTACCCGGAGGTAGGCTCAAAAAT
TATGTACAGTATGGGTCCGTTCATTTTTTGGATTTAGGTGACCATTGCTG
CTCAAATGATATAAAAAATTATCCAGTTCAAATAAAAGACAGTAAACCAT
GAATAGATATTTTGAGTGAAACATattcaaaaacaagaaaatacgTACCA
TCTCACTGGCTAAAACACGTGAAAATTCACTCTGCATTGCATAGGGTAGC
GCAGTATCGGCCCGATTCTGGTATGTTTTGGTGAACC Run BLAST on NCBI transcript from alignment at sc0000183:120368..122085+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014192 ID=TCONS_00014192|Name=TCONS_00014192|organism=Clytia hemisphaerica|type=transcript|length=1718bp|location=Sequence derived from alignment at sc0000183:120368..122085+ (Clytia hemisphaerica)
AGATATGCAATTTTGGATACCAACTAAAAACTTGATAAGCAATCTGAGAG
AATCCAGATTGCAACCAGTTGACCTTTTATCTTTTAGCTTTTGCCACAAT
CACTCCAATTGGTTCCACATGAAGCAAAtacaataattaaaataaatacC
TGTAACgaataaaagaaattaattaACGATGCCTTTTTATTAGCTTTCCT
TTTTAAAATTAGCATTTTCAAACCGTTATCAGTCTTGTCAGATTTAGGCc
caaaaacaaagataaaatgCAACGAGAATCAGATAAATAGttatttgaaa
tatatttcaaaagaatGCGAAGTGACATACCAATATAACACATACGATGG
CGACtgtaattttcacatttttcataaacattGTTCTCTCAAGAGTTCTG
CTTGATTTCTTAAAAGTCATGgcctaaaataagaaaatttgtttaatgGT
GATCGAATTGTAATAAATTTCTAGATAACAGTTTAGGGTTAAAGGCATCA
CACACACAAATACTAGACTTTGATAAACCTCATTCACTTACAGAAGTACT
TAGGTCATCAGTCTTTTCAACAAGAAGCTCTAGTTTTTCTCCTCGTTGTG
CTATTGAATCTGGTGAGAGGAAAAGAAATGTGTAGGTGTGGTAAATTTAT
CAAACCATGTGATATACGTACATAAATGGATACATACAGCTTCATGAAAA
CAGTTCTTTTACCAGATTTACCAAGATGTCAAAGCTTCTATTAATACACA
GAACACAATTTTGTCCATTGCTGATCATAACCGAGcatatttcaaattaa
tttcaagaaaataaagTATTACGTAAAGCTGtacaacaaagaaaagaaag
ctGTTACCAATATTATTGATCATGATCCCTTTCAATTCACTCAAATCTTC
CTGTACTCTCTGCATTTTGCCAGAATCTCCTTTCGAGAAATGTCGCTTAA
atgaaaacaagctagatgctgaatggacctacctgatgatgaaagttaga
tagcaatgcgaggagaaaaatgaaaaaaatcagtcaaattgaatcatgct
tgatgatgAGCactgttatcaataatgtttttgtgtgaaaaacatagaaa
aataagaaaaaatccaacaaaaatctgcaaaaacggcaatttccggtatt
ttcggcaggaaaaaaaaatttctcaaaaatcaaactcggctatgttttgg
gcattgttaatacacatcttcgtgcaaaaaatcagaaaagactaatgata
aaatctcgagaaaatgccaaaaaaacagtttttccggcatatttttcgaa
aatcgggctctgtcacattttgggcattgccattttgcatcaatgtgcca
aaaatcagaaaaaactaattagccaatcctgagaaaagctggtaacagac
ggacggacgaacggacaaacggacggacatcggttaatttataggacctt
caccgGTGTACCCGGAGGTAGGCTCAAAAATTATGTACAGTATGGGTCCG
TTCATTTTTTGGATTTAGGTGACCATTGCTGCTCAAATGATATAAAAAAT
TATCCAGTTCAAATAAAAGACAGTAAACCATGAATAGATATTTTGAGTGA
AACATattcaaaaacaagaaaatacgTACCATCTCACTGGCTAAAACACG
TGAAAATTCACTCTGCATTGCATAGGGTAGCGCAGTATCGGCCCGATTCT
GGTATGTTTTGGTGAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014192-exon-sc0000183-1491911889:120368..120512 | TCONS_00014192-exon-sc0000183-1491911889:120368..120512 | Clytia hemisphaerica | exon |
| TCONS_00014192-exon-sc0000183-1510915933:120368..120512 | TCONS_00014192-exon-sc0000183-1510915933:120368..120512 | Clytia hemisphaerica | exon |
| TCONS_00014192-exon-sc0000183-1575043694:120368..120512 | TCONS_00014192-exon-sc0000183-1575043694:120368..120512 | Clytia hemisphaerica | exon |
| TCONS_00014192-exon-sc0000183-1491911889:120694..122085 | TCONS_00014192-exon-sc0000183-1491911889:120694..122085 | Clytia hemisphaerica | exon |
| TCONS_00014192-exon-sc0000183-1510915933:120694..122085 | TCONS_00014192-exon-sc0000183-1510915933:120694..122085 | Clytia hemisphaerica | exon |
| TCONS_00014192-exon-sc0000183-1575043694:120694..122085 | TCONS_00014192-exon-sc0000183-1575043694:120694..122085 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:120368..122085 + |
Blast
The following BLAST results are available for this feature:
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