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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014237 ID=TCONS_00014237|Name=TCONS_00014237|organism=Clytia hemisphaerica|type=transcript|length=2230bp
caaaataaaataatcaaaaattagattattttcaagctaAATTTACTTTT
ATACCTAGCATAAAATAATATTACAATCCAATAAATGGAACTTAATCACA
TCTCATTTGTAGTGAGTTAGGAACAGTACTTCGACTGAAAAATAATACCA
ATTCGCCTAACCCCCGAATCCCAagaacaaaaccaaacaacaatCTAAGT
ATGtacaaatttgtaaaaaaaatggaTTGAAATTTGTAAGTAACACTGTT
TAGGGATTGAAAGGAATTCAATGTCTCAAGATACCAATACTAGGGTgtct
tagaccatgttcagacgttacgctTTCGTATCGATCCGGTGTGGTATTTG
TTACGGATAGGAAGTGTTTCATACtcatttcggaacgtttcggagcaaga
aaacgaaacagttccgttccgatgaaagtagtggagcgaaaccgtttcga
tctgttttgctttgtaacgtcttcatTTTCgacgtttcaaattttgatgt
tcacacagtgtttcggaaccgtttcgtttcggagcgaaacggaacgtagc
gtgtgaacatggtcttaataaaatagaaaagttttacTGTGTCCCAATAA
TTACACCATCAAGAAAAATAAGACATTTTCATACGAAAATAAAAGGCAAA
AGCCgaacagaaaacagaaaacagagAACAGATAAAGCTAAAGCGTGCAG
CGATCAGTTTTAATCTagccaaaaagaatttcaaaagaatacAACTCTTG
AAGTTCTTTTGAATACACCAATTCAAATAAATTAATTGTATGCTAAAGAA
AGATatggaaataaataaattgaataaaagaacTAATGGATAAAACTTGA
AGCAGAATTTGAGAGGCTAGGTACACGATGAAACACGCGACCTTGTTACA
CGAACATAGTCTGGTTGTTCGTCTCCATTTTCTCCTATAAAATCACCACA
ACTGTTCaaacgtcttctttttttacTCCCATTAACAAGACATTTCAGTT
TCGTTATTGAGGCTGCGTGACCAGTAAATTCGCTCTGCTCAGCAAAAGTG
TCttcaattgttttattatttaggCGCGGACTGTTACGACGTTGTGGCTC
CGCGATAGGCGGTAGGTTACGAAATCGTTTCTTCCCTTTACGAGCTAACG
AAGAAGGCTTAAAAACATTATCGTTTCCTTGCGATGTTGTGTCGATATAA
AGGTCTAGTGGTTGACCTGAATTCGCAGTCAAAAGCTTATCCTTAGGATC
CAGTCCATTGGATATAGGTCTATTATcacttttattattttcattggTAG
AGCTCTCTTTCGTATTATCAAGAGAATTTATTAAAGGACTCGTTTCATCT
GTTGGACATTCATCGTGTGTTTTTAATAACGTTTTTTCGTCCGCCGGTTT
TTCATCATTCACGTTAATTTCGGTTTTAATTTTAGTCATTCGACCAGCAT
CCTCACAATCGGATTCGTCGTCTGTCAGGAAAATAGCATTGAAAGTTTCC
CtggaaatttctttcttttcaatctCATTGCCACCCAGTTcatctttttc
aaaatctaaccTTTTGACAGCAGTTGACGAGCCCTCAGTGCATTCTTCAG
GGGAAATTGCAACTTGATCCTTTTCgctttttagtttttcatttttaatt
ttcacgttATTATCCTGAGTGTCGAacgatttattttctttcttaaaaaa
ttcaaagatgTTTCGCTGCGTTGACGCTGTAGCATGATCAAGCTTCACAG
TTCGTATCATACCATTAATTTTCGGGGAACTGGCACGACTAGATCGCCTC
GATGATTGGTTTGATCTCGGAACCGGTTTGTCTCGTTCCAGATCCTTTTC
GTTAAATTTCTCAATGATACTCGTATCTAAGAGTTCGTCATCTTCTTCAA
TAGTTGAATCAAACATGGTATCTGTTCGTCCgttttcttctttccaaagC
TTCTCATTCACATAATTTTCAGAGAAATCGTTGAACTGAGTCGATCGTTG
TGTAAGGAATTCTAATTTATCACCACCAGACCAATCTTCATTTTCGTCCA
GCAGCATATCGTTTTGTTTGTAAAAGACTTCCATGGAAGTACGTTGTATT
TCTTTACGCACTTTCTCACGCCGTACGATCATGTAACAGAGATTCCGTAG
CTAGAATAAAAAGAGAACCGTTTGAGCTAATGAAGCATGAGTCAGTAAAT
AGTTTATCTGACAGTAAAAATTAGTCGTTT Run BLAST on NCBI transcript from alignment at sc0000183:214890..217184- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014237 ID=TCONS_00014237|Name=TCONS_00014237|organism=Clytia hemisphaerica|type=transcript|length=2295bp|location=Sequence derived from alignment at sc0000183:214890..217184- (Clytia hemisphaerica)
CAAAATAAAATAATCAAAAATTAGATTATTTTCAAGCTAAATTTACTTTT
ATACCTAGCATAAAATAATATTACAATCCAATAAATGGAACTTAATCACA
TCTCATTTGTAGTGAGTTAGGAACAGTACTTCGACTGAAAAATAATACCA
ATTCGCCTAACCCCCGAATCCCAAGAACAAAACCAAACAACAATCTAAGT
ATGTACAAATTTGTAAAAAAAATGGATTGAAATTTGTAAGTAACACTGTT
TAGGGATTGAAAGGAATTCAATGTCTCAAGATACCAATACTAGGGTGTCT
TAGACCATGTTCAGACGTTACGCTTTCGTATCGATCCGGTGTGGTATTTG
TTACGGATAGGAAGTGTTTCATACTCATTTCGGAACGTTTCGGAGCAAGA
AAACGAAACAGTTCCGTTCCGATGAAAGTAGTGGAGCGAAACCGTTTCGA
TCTGTTTTGCTTTGTAACGTCTTCATTTTCGACGTTTCAAATTTTGATGT
TCACACAGTGTTTCGGAACCGTTTCGTTTCGGAGCGAAACGGAACGTAGC
GTGTGAACATGGTCTTAATAAAATAGAAAAGTTTTACTGTGTCCCAATAA
TTACACCATCAAGAAAAATAAGACATTTTCATACGAAAATAAAAGGCAAA
AGCCGAACAGAAAACAGAAAACAGAGAACAGATAAAGCTAAAGCGTGCAG
CGATCAGTTTTAATCTAGCCAAAAAGAATTTCAAAAGAATACAACTCTTG
AAGTTCTTTTGAATACACCAATTCAAATAAATTAATTGTATGCTAAAGAA
AGATATGGAAATAAATAAATTGAATAAAAGAACTAATGGATAAAACTTGA
AGCAGAATTTGAGAGGCTAGGTACACGATGAAACACGCGACCTTGTTACA
CGAACATAGTCTGGTTGTTCGTCTCCATTTTCTCCTATAAAATCACCACA
ACTGTTCAAACGTCTTCTTTTTTTACTCCCATTAACAAGACATTTCAGTT
TCGTTATAGAGGCTGNCTGTTCAAACGTCTTCTCTTTTTACTCCCATTAA
CAAGACATTTCAGTTTCGTTATTGAGGCTGCGTGACCAGTAAATTCGCTC
TGCTCAGCAAAAGTGTCTTCAATTGTTTTATTATTTAGGCGCGGACTGTT
ACGACGTTGTGGCTCCGCGATAGGCGGTAGGTTACGAAATCGTTTCTTCC
CTTTACGAGCTAACGAAGAAGGCTTAAAAACATTATCGTTTCCTTGCGAT
GTTGTGTCGATATAAAGGTCTAGTGGTTGACCTGAATTCGCAGTCAAAAG
CTTATCCTTAGGATCCAGTCCATTGGATATAGGTCTATTATCACTTTTAT
TATTTTCATTGGTAGAGCTCTCTTTCGTATTATCAAGAGAATTTATTAAA
GGACTCGTTTCATCTGTTGGACATTCATCGTGTGTTTTTAATAACGTTTT
TTCGTCCGCCGGTTTTTCATCATTCACGTTAATTTCGGTTTTAATTTTAG
TCATTCGACCAGCATCCTCACAATCGGATTCGTCGTCTGTCAGGAAAATA
GCATTGAAAGTTTCCCTGGAAATTTCTTTCTTTTCAATCTCATTGCCACC
CAGTTCATCTTTTTCAAAATCTAACCTTTTGACAGCAGTTGACGAGCCCT
CAGTGCATTCTTCAGGGGAAATTGCAACTTGATCCTTTTCGCTTTTTAGT
TTTTCATTTTTAATTTTCACGTTATTATCCTGAGTGTCGAACGATTTATT
TTCTTTCTTAAAAAATTCAAAGATGTTTCGCTGCGTTGACGCTGTAGCAT
GATCAAGCTTCACAGTTCGTATCATACCATTAATTTTCGGGGAACTGGCA
CGACTAGATCGCCTCGATGATTGGTTTGATCTCGGAACCGGTTTGTCTCG
TTCCAGATCCTTTTCGTTAAATTTCTCAATGATACTCGTATCTAAGAGTT
CGTCATCTTCTTCAATAGTTGAATCAAACATGGTATCTGTTCGTCCGTTT
TCTTCTTTCCAAAGCTTCTCATTCACATAATTTTCAGAGAAATCGTTGAA
CTGAGTCGATCGTTGTGTAAGGAATTCTAATTTATCACCACCAGACCAAT
CTTCATTTTCGTCCAGCAGCATATCGTTTTGTTTGTAAAAGACTTCCATG
GAAGTACGTTGTATTTCTTTACGCACTTTCTCACGCCGTACGATCATGTA
ACAGAGATTCCGTAGCTAGAATAAAAAGAGAACCGTTTGAGCTAATGAAG
CATGAGTCAGTAAATAGTTTATCTGACAGTAAAAATTAGTCGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014237-exon-sc0000183-1575043694:216194..217184 | TCONS_00014237-exon-sc0000183-1575043694:216194..217184 | Clytia hemisphaerica | exon |
| TCONS_00014237-exon-sc0000183-1575043694:214890..216128 | TCONS_00014237-exon-sc0000183-1575043694:214890..216128 | Clytia hemisphaerica | exon |
| TCONS_00014237-exon-sc0000183-1510915933:216194..217184 | TCONS_00014237-exon-sc0000183-1510915933:216194..217184 | Clytia hemisphaerica | exon |
| TCONS_00014237-exon-sc0000183-1510915933:214890..216128 | TCONS_00014237-exon-sc0000183-1510915933:214890..216128 | Clytia hemisphaerica | exon |
| TCONS_00014237-exon-sc0000183-1491911889:216194..217184 | TCONS_00014237-exon-sc0000183-1491911889:216194..217184 | Clytia hemisphaerica | exon |
| TCONS_00014237-exon-sc0000183-1491911889:214890..216128 | TCONS_00014237-exon-sc0000183-1491911889:214890..216128 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:214890..217184 - |
Blast
The following BLAST results are available for this feature:
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