TCONS_00014353 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014353
Unique NameTCONS_00014353
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length726

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014353 ID=TCONS_00014353|Name=TCONS_00014353|organism=Clytia hemisphaerica|type=transcript|length=726bp
CTCATGAACACATCTTTTTTTTTGCATACATATTTTTAATGagcataaaa
aatgaaagacattTAAAANAAATCAATTAGAATAATAGAACACGTCTCAT
GAACACATCTTTTTTTTTGCATACATATTTTTAATGagcataaaaaatga
aagacatttaaaaacgtccaaatgaaaaaaaaataaaatagttttgccCT
TACTTTCTTCACTCGACGTTGTAAAACAACACTGAGCAAGCAAGAAGcct
aataatgataaaaaaactaacCTCTAGCCCCTAAACAATAAAATccatgt
ttttaaaattcttacaaaataaaaagctttttttaagaGACTTTGGTAAA
GCTTCTAGCTGTCATGATATATATGTTATACTTCTAGTACGGCACGTAGT
CTTTCCGGGGAGAGGGTGgtagtgggtttaccaactgacggtgtGTTCGA
TGGCTTTCAGAATTGCGCCCTTAAAGTTCAGTAAAGAATCGATGATATtt
atacccttacagtgcatttttactatcttaaaaatcatacccttaaccgc
cgcacatacccgtcggtgaatttgcctgactgccccctcCCCCCCGGAGT
AGCTACGTTTCGTATTctgaaatatgaaatattgcCAAAAAACGATGATC
ATTTTTAGGACAAAAAAAACTGAGCCTGGAATAGATTCAAGCACCTTTGT
AGAATAGTaaaaagtactttaggcgt
Run BLAST on NCBI

transcript from alignment at sc0000185:463098..463823

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014353 ID=TCONS_00014353|Name=TCONS_00014353|organism=Clytia hemisphaerica|type=transcript|length=726bp|location=Sequence derived from alignment at sc0000185:463098..463823 (Clytia hemisphaerica)
acgcctaaagtactttttACTATTCTACAAAGGTGCTTGAATCTATTCCA
GGCTCAGTTTTTTTTGTCCTAAAAATGATCATCGTTTTTTGgcaatattt
catatttcagAATACGAAACGTAGCTACTCCGGGGGGgagggggcagtca
ggcaaattcaccgacgggtatgtgcggcggttaagggtatgatttttaag
atagtaaaaatgcactgtaagggtataaATATCATCGATTCTTTACTGAA
CTTTAAGGGCGCAATTCTGAAAGCCATCGAACacaccgtcagttggtaaa
cccactacCACCCTCTCCCCGGAAAGACTACGTGCCGTACTAGAAGTATA
ACATATATATCATGACAGCTAGAAGCTTTACCAAAGTCtcttaaaaaaag
ctttttattttgtaagaattttaaaaacatggATTTTATTGTTTAGGGGC
TAGAGgttagtttttttatcattattaggCTTCTTGCTTGCTCAGTGTTG
TTTTACAACGTCGAGTGAAGAAAGTAAGggcaaaactattttattttttt
ttcatttggacgtttttaaatgtctttcattttttatgctCATTAAAAAT
ATGTATGCAAAAAAAAAGATGTGTTCATGAGACGTGTTCTATTATTCTAA
TTGATTTNTTTTAaatgtctttcattttttatgctCATTAAAAATATGTA
TGCAAAAAAAAAGATGTGTTCATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008033XLOC_008033Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014353-exon-sc0000185-1491911889:463098..463823TCONS_00014353-exon-sc0000185-1491911889:463098..463823Clytia hemisphaericaexon
TCONS_00014353-exon-sc0000185-1510915933:463098..463823TCONS_00014353-exon-sc0000185-1510915933:463098..463823Clytia hemisphaericaexon
TCONS_00014353-exon-sc0000185-1575043694:463098..463823TCONS_00014353-exon-sc0000185-1575043694:463098..463823Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:463098..463823 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0686223	0.0669176	0.155395	0.0760151	0.462705	0.877526	17.0274	20.1532	15.0349	14.4688	6.67427	12.4767	1.04969	0.426565	0	0.0418165	1.13332	0.897612	2.18841	2.51902	4.37897	6.5048	1.73098	2.93283	2.06295	2.0384	6.11616	5.52313	0.456993	0.698405
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014353 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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