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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014367 ID=TCONS_00014367|Name=TCONS_00014367|organism=Clytia hemisphaerica|type=transcript|length=1352bp
TCTTTCACCGTTTTAGATTAAAATGAAACAACTTTAAAACTATGGATACT
AAGAAGAACTCCCTCGTGAAAGTCAGAGATGAGTTTTTGAACAACTTGCT
CCAAAAAAAGCTCACTGAACAAGAAAAAACTGGTGGTATTCATCGAGATG
TCTTTGAGCGTGATCTTCTATCACACGCTTATGATTTCGCATATGATAGA
GGTTTGAAAAGTGATTTGGTGGaatattttgtcattttctatCAGAATTT
GATTGCAGACACAGTAAAACAAGATCTACCATTAGCATCAGCCAGCATTC
TGATCAAGAATCGGATCCAAGAACTCACTATGAACCACAAGAAAAAATTc
cctcaaactttctttttcgATGCGGTCAATTACATTACGAGGAACATTTT
GCAACATTATCATCTCTTCGTCTTTGCGTTTTGTCAATCTCGACAAGCAG
AGATTCACCAACATGAAGTATTGGTGAAAGCAGCTCCTTATGAAGTAGAA
CCGTTAGATGTCAGTCAACCCATCTCTCAATGGAAGTTGGAAAAGGATCT
ACaggttgaagaagaaaaattcattgAAGAAGAACAGAACTTAAAGAGGA
GCCTTGAAAACTCAATGCTTGGAATCGAAAATGCAATAGAGGAATATTTC
GAGCAATTATTCACTCAATCTTCACCATCCTCCAATGATCAAATCGATTT
AGATGCCATTACACAGCAAATACAACAAATCATAACAAAACACAGTGAAA
TCACcacaaatgaaatgaatttcaaCTTGGAGCGAAGTCGTTTACTATTA
CTGAAGAACCTTAAAAAAGTTCAATTGTTACATGCGACCAATGGTGGCAG
AAGGGATGGAAAATCACCAACAAAAACGTTGAGCACTGCAATCAGTACta
taaagaaaaagtgaatttttaaaCTACCATAATGACTGACTGGTTCCATT
CAAACTATTAACTGAAAGTGATTTCTTTACAACAATGTTTCTGGACTAAT
CTTTtcatctacacgctttttttttataagaatggtgtaaatcaatttca
tcatggatattcttaacttttttgggaaaatcatcctaagatattcttac
agcattcttaggttagaatcctaattcagactagatttaacatttagtac
atacgtctcaaaattccatgatagtgatattcttagcatattcttaattt
ttttggtcattttcatcatggacattcttacaaagtgtattcttatataa
aaaaagcgtgcatgAAATACTTATTGGGAGGTTGATTGTTTTGTGGTATC
GGCAATAACAACAAATAGACATCGTTTCGAAATCTTCTGTAAGAAGTTTT
AT Run BLAST on NCBI protein sequence of TCONS_00014367-protein >TCONS_00014367-protein ID=TCONS_00014367-protein|Name=TCONS_00014367-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MDTKKNSLVKVRDEFLNNLLQKKLTEQEKTGGIHRDVFERDLLSHAYDFA
YDRGLKSDLVEYFVIFYQNLIADTVKQDLPLASASILIKNRIQELTMNHK
KKFPQTFFFDAVNYITRNILQHYHLFVFAFCQSRQAEIHQHEVLVKAAPY
EVEPLDVSQPISQWKLEKDLQVEEEKFIEEEQNLKRSLENSMLGIENAIE
EYFEQLFTQSSPSSNDQIDLDAITQQIQQIITKHSEITTNEMNFNLERSR
LLLLKNLKKVQLLHATNGGRRDGKSPTKTLSTAISTIKKK Run BLAST on NCBI transcript from alignment at sc0000187:183901..187278+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014367 ID=TCONS_00014367|Name=TCONS_00014367|organism=Clytia hemisphaerica|type=transcript|length=3378bp|location=Sequence derived from alignment at sc0000187:183901..187278+ (Clytia hemisphaerica)
TCTTTCACCGTTTTAGATTAAAATGAAACAACTTTAAAACTATGGATACT
AAGAAGAACTCCCTCGTGAAAGTCAGAGATGAGTTTTTGAACAACTTGCT
CCAAAAAAAGCTCACTGAACAAGAAAAAACTGGTGGTATTCATCGAGATG
TCTTTGAGCGTGATCTTCTATCACACGCTTATGATTTCGCATATGATAGA
GGTTTGAAAAGTGATTTGGTGGaatattttgtcattttctatCAGAATTT
GATTGCAGACACAGTAAAACAAGGTAATAATCtgacacatttttttttag
ataatcttTTTGTTGTTGTCATACAGTgtagtgtgtcccaaaaaaaggtG
GATGAATTTCTATAAAGTGATATAATAGTTTATTCATaaataagtaagtc
tgcgaccgcagtcggtggcgacccgaaggctcctctttcgatagctattt
acccgaaggtaggggagggcgccactctttctccctggattgctccactt
acccttgatccttctcttaattgctcagcatcaagcagagaggcatcaag
taccattttgggaatctttggtatgacccggctgggggttgagcccttgc
gaaccgtagccggatgctctaccactgcacctCAGTCGctaaaattatat
aaaatattCATACATAATTTATGCTATATTTCATGACTTGTATACTTGAT
AAtcatttcaatctcaaaaacctctcaattattattttgtgaattgaata
tctattgattgaacaaAGAATTGTAATCgcatttcaattattttaagcCC
AGTTTGGATGAtgagtttttaaaaaaattgtacgctttttttgggacaca
ctgtatgtATGAGAAGGGAATTCCGTGAGCTTTTTAGATCACGAGATTAA
AGATTTTCACCACACAATGAAGAAGTAGAATGATCATTTTCACTTCCTAA
TTGTAGATCTACCATTAGCATCAGCCAGCATTCTGATCAAGAATCGGATC
CAAGAACTCACTATGAACCACAAGAAAAAATTccctcaaactttcttttt
cgATGCGGTCAATTACATTACGAGGAACATTTTGCAACATTATCATCTCT
TCGTCTTTGCGTTTTGTCAATCTCGACAAGCAGAGGTAcacatttttatc
tataagaacatccaaaatttttgaagcgttcggatgttcttaacttttga
gtttttgagttaaaatgttctttacatattcttaatttcaccaatttgtg
agtattttgcgCAATTTTAAGAAATTGGTCGGTTTTAGAGCCCTTAATGT
Tcgcttaacttgttcttgatattttggccaccgaaccgaagccttatttt
cttatttagtttgtttttatgaaaactctctctctaattcgagtcatttt
caagggaaattgaattttcatcgtgataagggagcttatcaaaTAATAGA
GCTCTTTCTCTGTCCGCAACGTTTCATTGTATGCCGttacaagttttatt
tttgtgcATGTACACACTGAATTCTCTTGGAAATCATATCAAGGCGGCAA
ATGAAGTAATGTGAACAGGCCCTTACTATATACTAATGCTATTgtttatt
taaaggttttatttttacataagtctttccgtttcatatcagacacgtaT
TTCATaacaggacagtgtcttgctattgttatattatgctgatgtgagca
aaaaaatgtttttcttttcctctttctgatcaatcttgcttcacatccat
gtcaatccaatgtgaaaaagcttgtgagttaaaattaatgagtaagcaaa
cgatatcactcttatttaaaaacaaaacctttaaccacCATTTTAATAAT
ATCACACCTGATTTCTCTCAGATTCACCAACATGAAGTATTGGTGAAAGC
AGCTCCTTATGAAGTAGAACCGTTAGATGTCAGTCAACCCATCTCTCAAT
GGAAGTTGGAAAAGGATCTACaggttgaagaagaaaaattcattgAAGAA
GAACAGGTATGTGTCAGTACCGTAGATTTataagcccgaagagctagata
tCGAACtgtaagccatcgcaggcaaaaaaattgaatatcggaaaaaaata
ttgttgctattgttttcgaaaacccgtgaagcttcttattggtcaagcgc
tgaaattctattgtaatgtcacgtgatttaagtaggatttcctacctaac
catgGCACACTTTTCACAAAAGcttgacatctagcccttcgggctttata
aatctatggtcagTACCGTAGCTACAGGGGGGCTTTGAACCACTTTTGGC
ACacttggcacacttgttccttgggtgaatatatCTGGGGggtatctttt
tcattttttttttcaaaaatttttgatttttgccgtctggggacaagttt
ttcatcaaaatgagaGTAAAACTTTTGGGTAGGCTGGAGGCttaaaaaat
ggtcagatttggttgaaatttggcacaattGTTCATTTGGTcaggtaaat
atttttcaaaaagtttttttggcgCAAGGGGATAAGCTTTTCACCAAAAC
AAGGCTAGAACTTTTTGGGCATCCTACGGTACATAATCATCCCTTGAAAC
GTCTTTTCACCAGAACTTAAAGAGGAGCCTTGAAAACTCAATGCTTGGAA
TCGAAAATGCAATAGAGGAATATTTCGAGCAATTATTCACTCAATCTTCA
CCATCCTCCAATGATCAAATCGATTTAGATGCCATTACACAGCAAATACA
ACAAATCATAACAAAACACAGTGAAATCACcacaaatgaaatgaatttca
aCTTGGAGCGAAGTCGTTTACTATTACTGAAGAACCTTAAAAAAGTTCAA
TTGTTACATGCGACCAATGGTGGCAGAAGGGATGGAAAATCACCAACAAA
AACGTTGAGCACTGCAATCAGTACtataaagaaaaagtgaatttttaaaC
TACCATAATGACTGACTGGTTCCATTCAAACTATTAACTGAAAGTGATTT
CTTTACAACAATGTTTCTGGACTAATCTTTtcatctacacgctttttttt
tataagaatggtgtaaatcaatttcatcatggatattcttaacttttttg
ggaaaatcatcctaagatattcttacagcattcttaggttagaatcctaa
ttcagactagatttaacatttagtacatacgtctcaaaattccatgatag
tgatattcttagcatattcttaatttttttggtcattttcatcatggaca
ttcttacaaagtgtattcttatataaaaaaagcgtgcatgAAATACTTAT
TGGGAGGTTGATTGTTTTGTGGTATCGGCAATAACAACAAATAGACATCG
TTTCGAAATCTTCTGTAAGAAGTTTTAT Coding sequence (CDS) from alignment at sc0000187:183901..187278+ >TCONS_00014367 ID=TCONS_00014367|Name=TCONS_00014367|organism=Clytia hemisphaerica|type=CDS|length=3492bp|location=Sequence derived from alignment at sc0000187:183901..187278+ (Clytia hemisphaerica)
ATGGATACTAAGAAGAACTCCCTCGTGAAAGTCAGAGATGAGTTTTTGAA
CAACTTGCTCCAAAAAAAGCTCACTGAACAAGAAAAAACTGGTGGTATTC
ATCGAGATGTCTTTGAGCGTGATCTTCTATCACACGCTTATGATTTCGCA
TATGATAGAGGTTTGAAAAGTGATTTGGTGGaatattttgtcattttcta
tCAGAATTTGATTGCAGACACAGTAAAACAAGATCTACCATTAGCATCAG
CCAGCATTCTGATCAAGAATCGGATCCAAGAACTCACTATGAACCACAAG
AAAAAATTccctcaaactttctttttcgATGCGGTCAATTACATTACGAG
GAACATTTTGCAACATTATCATCTCTTCGTCTTTGCGTTTTGTCAATCTC
GACAAGCAGAGATTCACCAACATGAAGTATTGGTGAAAGCAGCTCCTTAT
GAAGTAGAACCGTTAGATGTCAGTCAACCCATCTCTCAATGGAAGTTGGA
AAAGGATCTACaggttgaagaagaaaaattcattgAAGAAGAACAGAACT
TAAAGAGGAGCCTTGAAAACTCAATGCTTGGAATCGAAAATGCAATAGAG
GAATATTTCGAGCAATTATTCACTCAATCTTCACCATCCTCCAATGATCA
AATCGATTTAGATGCCATTACACAGCAAATACAACAAATCATAACAAAAC
ACAGTGAAATCACcacaaatgaaatgaatttcaaCTTGGAGCGAAGTCGT
TTACTATTACTGAAGAACCTTAAAAAAGTTCAATTGTTACATGCGACCAA
TGGTGGCAGAAGGGATGGAAAATCACCAACAAAAACGTTGAGCACTGCAA
TCAGTACtataaagaaaaagtgaATGGATACTAAGAAGAACTCCCTCGTG
AAAGTCAGAGATGAGTTTTTGAACAACTTGCTCCAAAAAAAGCTCACTGA
ACAAGAAAAAACTGGTGGTATTCATCGAGATGTCTTTGAGCGTGATCTTC
TATCACACGCTTATGATTTCGCATATGATAGAGGTTTGAAAAGTGATTTG
GTGGaatattttgtcattttctatCAGAATTTGATTGCAGACACAGTAAA
ACAAGATCTACCATTAGCATCAGCCAGCATTCTGATCAAGAATCGGATCC
AAGAACTCACTATGAACCACAAGAAAAAATTccctcaaactttctttttc
gATGCGGTCAATTACATTACGAGGAACATTTTGCAACATTATCATCTCTT
CGTCTTTGCGTTTTGTCAATCTCGACAAGCAGAGATTCACCAACATGAAG
TATTGGTGAAAGCAGCTCCTTATGAAGTAGAACCGTTAGATGTCAGTCAA
CCCATCTCTCAATGGAAGTTGGAAAAGGATCTACaggttgaagaagaaaa
attcattgAAGAAGAACAGAACTTAAAGAGGAGCCTTGAAAACTCAATGC
TTGGAATCGAAAATGCAATAGAGGAATATTTCGAGCAATTATTCACTCAA
TCTTCACCATCCTCCAATGATCAAATCGATTTAGATGCCATTACACAGCA
AATACAACAAATCATAACAAAACACAGTGAAATCACcacaaatgaaatga
atttcaaCTTGGAGCGAAGTCGTTTACTATTACTGAAGAACCTTAAAAAA
GTTCAATTGTTACATGCGACCAATGGTGGCAGAAGGGATGGAAAATCACC
AACAAAAACGTTGAGCACTGCAATCAGTACtataaagaaaaagtgaATGG
ATACTAAGAAGAACTCCCTCGTGAAAGTCAGAGATGAGTTTTTGAACAAC
TTGCTCCAAAAAAAGCTCACTGAACAAGAAAAAACTGGTGGTATTCATCG
AGATGTCTTTGAGCGTGATCTTCTATCACACGCTTATGATTTCGCATATG
ATAGAGGTTTGAAAAGTGATTTGGTGGaatattttgtcattttctatCAG
AATTTGATTGCAGACACAGTAAAACAAGATCTACCATTAGCATCAGCCAG
CATTCTGATCAAGAATCGGATCCAAGAACTCACTATGAACCACAAGAAAA
AATTccctcaaactttctttttcgATGCGGTCAATTACATTACGAGGAAC
ATTTTGCAACATTATCATCTCTTCGTCTTTGCGTTTTGTCAATCTCGACA
AGCAGAGATTCACCAACATGAAGTATTGGTGAAAGCAGCTCCTTATGAAG
TAGAACCGTTAGATGTCAGTCAACCCATCTCTCAATGGAAGTTGGAAAAG
GATCTACaggttgaagaagaaaaattcattgAAGAAGAACAGAACTTAAA
GAGGAGCCTTGAAAACTCAATGCTTGGAATCGAAAATGCAATAGAGGAAT
ATTTCGAGCAATTATTCACTCAATCTTCACCATCCTCCAATGATCAAATC
GATTTAGATGCCATTACACAGCAAATACAACAAATCATAACAAAACACAG
TGAAATCACcacaaatgaaatgaatttcaaCTTGGAGCGAAGTCGTTTAC
TATTACTGAAGAACCTTAAAAAAGTTCAATTGTTACATGCGACCAATGGT
GGCAGAAGGGATGGAAAATCACCAACAAAAACGTTGAGCACTGCAATCAG
TACtataaagaaaaagtgaATGGATACTAAGAAGAACTCCCTCGTGAAAG
TCAGAGATGAGTTTTTGAACAACTTGCTCCAAAAAAAGCTCACTGAACAA
GAAAAAACTGGTGGTATTCATCGAGATGTCTTTGAGCGTGATCTTCTATC
ACACGCTTATGATTTCGCATATGATAGAGGTTTGAAAAGTGATTTGGTGG
aatattttgtcattttctatCAGAATTTGATTGCAGACACAGTAAAACAA
GATCTACCATTAGCATCAGCCAGCATTCTGATCAAGAATCGGATCCAAGA
ACTCACTATGAACCACAAGAAAAAATTccctcaaactttctttttcgATG
CGGTCAATTACATTACGAGGAACATTTTGCAACATTATCATCTCTTCGTC
TTTGCGTTTTGTCAATCTCGACAAGCAGAGATTCACCAACATGAAGTATT
GGTGAAAGCAGCTCCTTATGAAGTAGAACCGTTAGATGTCAGTCAACCCA
TCTCTCAATGGAAGTTGGAAAAGGATCTACaggttgaagaagaaaaattc
attgAAGAAGAACAGAACTTAAAGAGGAGCCTTGAAAACTCAATGCTTGG
AATCGAAAATGCAATAGAGGAATATTTCGAGCAATTATTCACTCAATCTT
CACCATCCTCCAATGATCAAATCGATTTAGATGCCATTACACAGCAAATA
CAACAAATCATAACAAAACACAGTGAAATCACcacaaatgaaatgaattt
caaCTTGGAGCGAAGTCGTTTACTATTACTGAAGAACCTTAAAAAAGTTC
AATTGTTACATGCGACCAATGGTGGCAGAAGGGATGGAAAATCACCAACA
AAAACGTTGAGCACTGCAATCAGTACtataaagaaaaagtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014367-exon-sc0000187-1491911889:183901..184173 | TCONS_00014367-exon-sc0000187-1491911889:183901..184173 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1510915933:183901..184173 | TCONS_00014367-exon-sc0000187-1510915933:183901..184173 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1575043694:183901..184173 | TCONS_00014367-exon-sc0000187-1575043694:183901..184173 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1491911889:184857..185035 | TCONS_00014367-exon-sc0000187-1491911889:184857..185035 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1510915933:184857..185035 | TCONS_00014367-exon-sc0000187-1510915933:184857..185035 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1575043694:184857..185035 | TCONS_00014367-exon-sc0000187-1575043694:184857..185035 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1491911889:185772..185906 | TCONS_00014367-exon-sc0000187-1491911889:185772..185906 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1510915933:185772..185906 | TCONS_00014367-exon-sc0000187-1510915933:185772..185906 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1575043694:185772..185906 | TCONS_00014367-exon-sc0000187-1575043694:185772..185906 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1491911889:186514..187278 | TCONS_00014367-exon-sc0000187-1491911889:186514..187278 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1510915933:186514..187278 | TCONS_00014367-exon-sc0000187-1510915933:186514..187278 | Clytia hemisphaerica | exon |
| TCONS_00014367-exon-sc0000187-1575043694:186514..187278 | TCONS_00014367-exon-sc0000187-1575043694:186514..187278 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:183901..187278 + |
Blast
The following BLAST results are available for this feature:
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