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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014458 ID=TCONS_00014458|Name=TCONS_00014458|organism=Clytia hemisphaerica|type=transcript|length=3692bp
tatatatcCGAAAACTCTATAAACAAGTACAGACAAGTTGAttctaataa
aaataaataaaacattttggaGGTTATTAAGGAGTCTTTatcattgtttt
cattttaaaatcgaATATCCCTCAAAAAGAGCCTGTCATAACAAAGAATT
GATATTATAAGGCGACCATCTTTAGACTgcaaaagaaaaacagaaaataa
ggctcattaaagaaaattgaatgaatctcaattatttttaaaaaatcttg
tatTTGATTTGAAGTCTAAAGGTCACTCACGAAAGAATCTTATCTGTAGC
TCATTCAAGTTTTGCTAAAAAGTTTAACTCTGTGATTGAtgtcaaaattg
ataaaataaaaaatagaaactttgttaaagaaaaattgcaaaatagaaaa
gatatgtcaaaaacctaaaaaaatcaactctcataaaagaaaatcttttt
aaaatcaataaatGATTAACATTAGCCCACTATTCACATGCTTCTATTTG
AAAAAACGTCAATACTTCAAGACAAAAAAGGGACACTCAAAAACTCATAA
AGTAGTATAACAGAAAAATTAAGCTGAACTTGGATCTTCTTGAAtgtatc
tcaaaatcattaaaaatggAAATCTTTCAAATCTTATTAGTTAAATTGAA
GGAAAACTCAAAAAGTACACCAAATATGCTACCTAGGTTAATATATTATG
TAAAAATTTTAAGTAGAATTCCTAAGAAAATTATTTCCCTCTGGGTTTGA
GGACAAGTGATTGGTCCCACATTTCATCCTCATCCATGTGATCTTCATAC
TCattaaaaaagtccaaaattttctcatttttctcgtAATCATATAAACC
TTCTTTGAATCGCCTCACACTATCCAATATATTAAATTGTTGCCATCGTT
TAACAAAGTTAATTTTACCATCTGGGAGCTCATGCTTATTCCCAAGATGG
ACAAATGTGATATCAGTTAAAATAAGACCCAAATATGGGATACATGGTAA
TTTAGCTCCTGCTAATGCTTCCCTATAAAGTTTGAAACCAGAAGAACTTT
CAATGAGTTTTGAGTCTTCAAGTAAGAGTTCAGTGTATTGTTTAGGCCAT
TCTAGCCTTCGTATTGGAGTAGAGTCAAGCGCAGAGAGGATGGCCAGGAA
GGAACTAAAATTATTTAGTCTTTTCAGTATcctcataattttcaaaaatt
tcttatacattttCTCACGTTCTGCTTGTCTGGTTTCTTTCAAGATTAAG
GTTCGAACCCAGAATGACATACTGTTGAAATGACCAATGAATCTGCTTAG
GTTAGGACTGAATGTCTCACTTTGTTCTTTTCCCCAGCGCAAAACTTCTG
GAAGTTCAATTTTCCTGAAATAATCTGCATCAAGTAGACACATTTGTTGA
GATAactcaaaacttttaaattcgaaaatttcAGCAGTGCTCTCTACAGG
TTGATAAGATGGTAAATGATTTTGTTGAAGCTTTATACAGTATCCAACAA
GTTTGTCGCGTAAATTTTTACCAAGCTGCAACTCTCCAGTATTCAGTAAT
CTATGAACCTGTGATCTTAATTGATCAAATAAAGATTTATCTAGTTCCTC
AAACATTTCATCAAAAACTTGTACAAGCAACTTCAAAACCTTCATTGAGA
TACTTGAAttcaatttcccttttgtctggAATCGATTAGCTCTGTAAAGC
AGTTTACAGATCAATTCAGCAGGTGAAATAAATGTCCGGTAGGTGGCAAG
AAAAGCTTTATAAAACACATCATCAGAATCAACTTGAGTTGCAAAAACAA
CCAGAGCATCAACAGTTCCACCACACAGCATTGGGTACTTCTTTTCAACT
TCCTTCTTGTACAACAACAAGTGTGAAACATCTTTACAATCAAGAGCTGG
TACGTTATCCTCCTCATAAGTCATGGTGGATTCTCGACGactatttcttt
gttttctttctctGATAACTTGGCTTGACTTGAAATGAGACACATCCTCC
TCTACACTACCTACACTACCTCGATGGTCATAAAACCGTCGTTTTGGAGG
TAACTTAGGTAGTCCATCTCCGCGAACGAGCTCATCAacattgtttacat
ttggtaaaGTTCCAAATGCATTCAGATTATCATACATTGAGGATGGACGG
TCATTGTAATAATCGCCAACAATTTgaagataattttcattgttatgTTT
CTGCTTCTTTCTGGGTAATTCAGGTGCGATATCTTCAAGTTCATTGCTAG
GTGATAAAAGATCATCATCTGCACCACCATTAAATAATGAAACTCTACTT
TGCGCAAGTGCTTCATAATTTTGTGAGAAGCTATGGACTTTACGAATTGT
CTCAGTTGTTACTCCAGCTTCATTCATTTCTTGTTGTGAACCAATAGTTG
TgtcaccatcaaagaattgacTGCTACCAAATTTCATTGGACTAGGACTA
CCTATAGACCCTGATGAAACTGTAGATAATGATGATTTGCTTCCCAGGTT
TCCGCTGAATGCAGGAGAGAAATCGGGATGTGCGTTCATATGTGACTGAG
GTCTTTGAGGAGGTTCCTTGATAACAGGAGAACTGGCCTCCCCTGGATGA
CTGATAGATTTCCTGATGGAGGGACCATTTGCATTTCCATAATAGCTTCG
ATTATCATTCGGTAGAGGTGGTTTAGGAGGGGCGTTAACAATAGGTGATG
AAGTGATACAATCATCTAGTATTTCAGTTTCAGGAATATTGTCTAAATCG
TCAAGTGAATTATTGCTTGAATGATGACTGAATGAACTGAATTTCAAAAG
TTCTGCattcaatgaaaatttctttattaaTGGCAGGACTTCATCATACA
AAAGTTGAAGTGATAACGAAACAGCGTCCGCAGCTTTTAATGCAGAGATT
TCATCGACTCTGACATGAAGATATGAATCAAATAAAACATCATCAGAAAT
TCGTACTAAAAAAGTTATACTTCGATGTAATTTTTCCTTCAACATAGGGA
CTTCTGAACTGTCCGTGTCAAGTGACGGCATACGAGAAAGAGATTTAATA
CAtttatcaataatttcttcagCATTAATTATGCTCTCCAAAACAGCTGT
GGCTGTTCCTGGAAGTTTTTGAATAAATCCTTTTTTCAATATAACTTTGT
AATAAATCAATGCACTCTTCACATCCTTCTGAATCTTTAAAAGTTTAGTT
TCCTCAGTCTCTTTTCTGTCATCAGCAGTTTTCGCACCATTAGTTGCAAT
AGTTGAAGAAGGTGTTTTTGGAGTTTTCGGTGGCTGTAGGGTTTGACTTT
TTCCGATCTCTGGACCAGAGTCTTTCTCATCTACAGCATGGGATGGAACT
TTGGGAAGTGTACTGCGTGACTTGGCAATTCTCTTCAGAAAAGTTTGCAT
ACGTTTAGCTTTACTATCGATATGATCTCCATCACGAGTTAAAGTTGCTG
TCTTTGAGTCAACTTTGGAAgtcattttcaaacaaatttataaaaCCTCC
CAGTAAACCAAAAGAAGCTTCTCACAACATCATAAATAAGCTGAATAGAA
TTGAACCTTTTACATCACTTTTCTTCTTTGATTTTGATGAGACAGCAAAC
ACAACTGATTGAACATTTCACTTTCATCTGACTGCTATGCCAACTTCTCG
TAATAGTAGGCTACTTCAAGACGTTTCTTAGTGTAACTTCAC Run BLAST on NCBI protein sequence of TCONS_00014458-protein >TCONS_00014458-protein ID=TCONS_00014458-protein|Name=TCONS_00014458-protein|organism=Clytia hemisphaerica|type=polypeptide|length=914bp
MTSKVDSKTATLTRDGDHIDSKAKRMQTFLKRIAKSRSTLPKVPSHAVDE
KDSGPEIGKSQTLQPPKTPKTPSSTIATNGAKTADDRKETEETKLLKIQK
DVKSALIYYKVILKKGFIQKLPGTATAVLESIINAEEIIDKCIKSLSRMP
SLDTDSSEVPMLKEKLHRSITFLVRISDDVLFDSYLHVRVDEISALKAAD
AVSLSLQLLYDEVLPLIKKFSLNAELLKFSSFSHHSSNNSLDDLDNIPET
EILDDCITSSPIVNAPPKPPLPNDNRSYYGNANGPSIRKSISHPGEASSP
VIKEPPQRPQSHMNAHPDFSPAFSGNLGSKSSLSTVSSGSIGSPSPMKFG
SSQFFDGDTTIGSQQEMNEAGVTTETIRKVHSFSQNYEALAQSRVSLFNG
GADDDLLSPSNELEDIAPELPRKKQKHNNENYLQIVGDYYNDRPSSMYDN
LNAFGTLPNVNNVDELVRGDGLPKLPPKRRFYDHRGSVGSVEEDVSHFKS
SQVIRERKQRNSRRESTMTYEEDNVPALDCKDVSHLLLYKKEVEKKYPML
CGGTVDALVVFATQVDSDDVFYKAFLATYRTFISPAELICKLLYRANRFQ
TKGKLNSSISMKVLKLLVQVFDEMFEELDKSLFDQLRSQVHRLLNTGELQ
LGKNLRDKLVGYCIKLQQNHLPSYQPVESTAEIFEFKSFELSQQMCLLDA
DYFRKIELPEVLRWGKEQSETFSPNLSRFIGHFNSMSFWVRTLILKETRQ
AEREKMYKKFLKIMRILKRLNNFSSFLAILSALDSTPIRRLEWPKQYTEL
LLEDSKLIESSSGFKLYREALAGAKLPCIPYLGLILTDITFVHLGNKHEL
PDGKINFVKRWQQFNILDSVRRFKEGLYDYEKNEKILDFFNEYEDHMDED
EMWDQSLVLKPRGK Run BLAST on NCBI transcript from alignment at sc0000187:248198..251889 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014458 ID=TCONS_00014458|Name=TCONS_00014458|organism=Clytia hemisphaerica|type=transcript|length=3692bp|location=Sequence derived from alignment at sc0000187:248198..251889 (Clytia hemisphaerica)
GTGAAGTTACACTAAGAAACGTCTTGAAGTAGCCTACTATTACGAGAAGT
TGGCATAGCAGTCAGATGAAAGTGAAATGTTCAATCAGTTGTGTTTGCTG
TCTCATCAAAATCAAAGAAGAAAAGTGATGTAAAAGGTTCAATTCTATTC
AGCTTATTTATGATGTTGTGAGAAGCTTCTTTTGGTTTACTGGGAGGttt
tataaatttgtttgaaaatgacTTCCAAAGTTGACTCAAAGACAGCAACT
TTAACTCGTGATGGAGATCATATCGATAGTAAAGCTAAACGTATGCAAAC
TTTTCTGAAGAGAATTGCCAAGTCACGCAGTACACTTCCCAAAGTTCCAT
CCCATGCTGTAGATGAGAAAGACTCTGGTCCAGAGATCGGAAAAAGTCAA
ACCCTACAGCCACCGAAAACTCCAAAAACACCTTCTTCAACTATTGCAAC
TAATGGTGCGAAAACTGCTGATGACAGAAAAGAGACTGAGGAAACTAAAC
TTTTAAAGATTCAGAAGGATGTGAAGAGTGCATTGATTTATTACAAAGTT
ATATTGAAAAAAGGATTTATTCAAAAACTTCCAGGAACAGCCACAGCTGT
TTTGGAGAGCATAATTAATGctgaagaaattattgataaaTGTATTAAAT
CTCTTTCTCGTATGCCGTCACTTGACACGGACAGTTCAGAAGTCCCTATG
TTGAAGGAAAAATTACATCGAAGTATAACTTTTTTAGTACGAATTTCTGA
TGATGTTTTATTTGATTCATATCTTCATGTCAGAGTCGATGAAATCTCTG
CATTAAAAGCTGCGGACGCTGTTTCGTTATCACTTCAACTTTTGTATGAT
GAAGTCCTGCCAttaataaagaaattttcattgaatGCAGAACTTTTGAA
ATTCAGTTCATTCAGTCATCATTCAAGCAATAATTCACTTGACGATTTAG
ACAATATTCCTGAAACTGAAATACTAGATGATTGTATCACTTCATCACCT
ATTGTTAACGCCCCTCCTAAACCACCTCTACCGAATGATAATCGAAGCTA
TTATGGAAATGCAAATGGTCCCTCCATCAGGAAATCTATCAGTCATCCAG
GGGAGGCCAGTTCTCCTGTTATCAAGGAACCTCCTCAAAGACCTCAGTCA
CATATGAACGCACATCCCGATTTCTCTCCTGCATTCAGCGGAAACCTGGG
AAGCAAATCATCATTATCTACAGTTTCATCAGGGTCTATAGGTAGTCCTA
GTCCAATGAAATTTGGTAGCAgtcaattctttgatggtgacACAACTATT
GGTTCACAACAAGAAATGAATGAAGCTGGAGTAACAACTGAGACAATTCG
TAAAGTCCATAGCTTCTCACAAAATTATGAAGCACTTGCGCAAAGTAGAG
TTTCATTATTTAATGGTGGTGCAGATGATGATCTTTTATCACCTAGCAAT
GAACTTGAAGATATCGCACCTGAATTACCCAGAAAGAAGCAGAAAcataa
caatgaaaattatcttcAAATTGTTGGCGATTATTACAATGACCGTCCAT
CCTCAATGTATGATAATCTGAATGCATTTGGAACtttaccaaatgtaaac
aatgtTGATGAGCTCGTTCGCGGAGATGGACTACCTAAGTTACCTCCAAA
ACGACGGTTTTATGACCATCGAGGTAGTGTAGGTAGTGTAGAGGAGGATG
TGTCTCATTTCAAGTCAAGCCAAGTTATCagagaaagaaaacaaagaaat
agtCGTCGAGAATCCACCATGACTTATGAGGAGGATAACGTACCAGCTCT
TGATTGTAAAGATGTTTCACACTTGTTGTTGTACAAGAAGGAAGTTGAAA
AGAAGTACCCAATGCTGTGTGGTGGAACTGTTGATGCTCTGGTTGTTTTT
GCAACTCAAGTTGATTCTGATGATGTGTTTTATAAAGCTTTTCTTGCCAC
CTACCGGACATTTATTTCACCTGCTGAATTGATCTGTAAACTGCTTTACA
GAGCTAATCGATTccagacaaaagggaaattgaaTTCAAGTATCTCAATG
AAGGTTTTGAAGTTGCTTGTACAAGTTTTTGATGAAATGTTTGAGGAACT
AGATAAATCTTTATTTGATCAATTAAGATCACAGGTTCATAGATTACTGA
ATACTGGAGAGTTGCAGCTTGGTAAAAATTTACGCGACAAACTTGTTGGA
TACTGTATAAAGCTTCAACAAAATCATTTACCATCTTATCAACCTGTAGA
GAGCACTGCTgaaattttcgaatttaaaagttttgagtTATCTCAACAAA
TGTGTCTACTTGATGCAGATTATTTCAGGAAAATTGAACTTCCAGAAGTT
TTGCGCTGGGGAAAAGAACAAAGTGAGACATTCAGTCCTAACCTAAGCAG
ATTCATTGGTCATTTCAACAGTATGTCATTCTGGGTTCGAACCTTAATCT
TGAAAGAAACCAGACAAGCAGAACGTGAGaaaatgtataagaaatttttg
aaaattatgaggATACTGAAAAGACTAAATAATTTTAGTTCCTTCCTGGC
CATCCTCTCTGCGCTTGACTCTACTCCAATACGAAGGCTAGAATGGCCTA
AACAATACACTGAACTCTTACTTGAAGACTCAAAACTCATTGAAAGTTCT
TCTGGTTTCAAACTTTATAGGGAAGCATTAGCAGGAGCTAAATTACCATG
TATCCCATATTTGGGTCTTATTTTAACTGATATCACATTTGTCCATCTTG
GGAATAAGCATGAGCTCCCAGATGGTAAAATTAACTTTGTTAAACGATGG
CAACAATTTAATATATTGGATAGTGTGAGGCGATTCAAAGAAGGTTTATA
TGATTacgagaaaaatgagaaaattttggacttttttaatGAGTATGAAG
ATCACATGGATGAGGATGAAATGTGGGACCAATCACTTGTCCTCAAACCC
AGAGGGAAATAATTTTCTTAGGAATTCTACTTAAAATTTTTACATAATAT
ATTAACCTAGGTAGCATATTTGGTGTACTTTTTGAGTTTTCCTTCAATTT
AACTAATAAGATTTGAAAGATTTccatttttaatgattttgagatacaTT
CAAGAAGATCCAAGTTCAGCTTAATTTTTCTGTTATACTACTTTATGAGT
TTTTGAGTGTCCCTTTTTTGTCTTGAAGTATTGACGTTTTTTCAAATAGA
AGCATGTGAATAGTGGGCTAATGTTAATCatttattgattttaaaaagat
tttcttttatgagagttgatttttttaggtttttgacatatcttttctat
tttgcaatttttctttaacaaagtttctattttttattttatcaattttg
acaTCAATCACAGAGTTAAACTTTTTAGCAAAACTTGAATGAGCTACAGA
TAAGATTCTTTCGTGAGTGACCTTTAGACTTCAAATCAAatacaagattt
tttaaaaataattgagattcattcaattttctttaatgagccttattttc
tgtttttcttttgcAGTCTAAAGATGGTCGCCTTATAATATCAATTCTTT
GTTATGACAGGCTCTTTTTGAGGGATATtcgattttaaaatgaaaacaat
gatAAAGACTCCTTAATAACCtccaaaatgttttatttatttttattaga
aTCAACTTGTCTGTACTTGTTTATAGAGTTTTCGgatatata Coding sequence (CDS) from alignment at sc0000187:248198..251889 >TCONS_00014458 ID=TCONS_00014458|Name=TCONS_00014458|organism=Clytia hemisphaerica|type=CDS|length=2745bp|location=Sequence derived from alignment at sc0000187:248198..251889 (Clytia hemisphaerica)
atgacTTCCAAAGTTGACTCAAAGACAGCAACTTTAACTCGTGATGGAGA
TCATATCGATAGTAAAGCTAAACGTATGCAAACTTTTCTGAAGAGAATTG
CCAAGTCACGCAGTACACTTCCCAAAGTTCCATCCCATGCTGTAGATGAG
AAAGACTCTGGTCCAGAGATCGGAAAAAGTCAAACCCTACAGCCACCGAA
AACTCCAAAAACACCTTCTTCAACTATTGCAACTAATGGTGCGAAAACTG
CTGATGACAGAAAAGAGACTGAGGAAACTAAACTTTTAAAGATTCAGAAG
GATGTGAAGAGTGCATTGATTTATTACAAAGTTATATTGAAAAAAGGATT
TATTCAAAAACTTCCAGGAACAGCCACAGCTGTTTTGGAGAGCATAATTA
ATGctgaagaaattattgataaaTGTATTAAATCTCTTTCTCGTATGCCG
TCACTTGACACGGACAGTTCAGAAGTCCCTATGTTGAAGGAAAAATTACA
TCGAAGTATAACTTTTTTAGTACGAATTTCTGATGATGTTTTATTTGATT
CATATCTTCATGTCAGAGTCGATGAAATCTCTGCATTAAAAGCTGCGGAC
GCTGTTTCGTTATCACTTCAACTTTTGTATGATGAAGTCCTGCCAttaat
aaagaaattttcattgaatGCAGAACTTTTGAAATTCAGTTCATTCAGTC
ATCATTCAAGCAATAATTCACTTGACGATTTAGACAATATTCCTGAAACT
GAAATACTAGATGATTGTATCACTTCATCACCTATTGTTAACGCCCCTCC
TAAACCACCTCTACCGAATGATAATCGAAGCTATTATGGAAATGCAAATG
GTCCCTCCATCAGGAAATCTATCAGTCATCCAGGGGAGGCCAGTTCTCCT
GTTATCAAGGAACCTCCTCAAAGACCTCAGTCACATATGAACGCACATCC
CGATTTCTCTCCTGCATTCAGCGGAAACCTGGGAAGCAAATCATCATTAT
CTACAGTTTCATCAGGGTCTATAGGTAGTCCTAGTCCAATGAAATTTGGT
AGCAgtcaattctttgatggtgacACAACTATTGGTTCACAACAAGAAAT
GAATGAAGCTGGAGTAACAACTGAGACAATTCGTAAAGTCCATAGCTTCT
CACAAAATTATGAAGCACTTGCGCAAAGTAGAGTTTCATTATTTAATGGT
GGTGCAGATGATGATCTTTTATCACCTAGCAATGAACTTGAAGATATCGC
ACCTGAATTACCCAGAAAGAAGCAGAAAcataacaatgaaaattatcttc
AAATTGTTGGCGATTATTACAATGACCGTCCATCCTCAATGTATGATAAT
CTGAATGCATTTGGAACtttaccaaatgtaaacaatgtTGATGAGCTCGT
TCGCGGAGATGGACTACCTAAGTTACCTCCAAAACGACGGTTTTATGACC
ATCGAGGTAGTGTAGGTAGTGTAGAGGAGGATGTGTCTCATTTCAAGTCA
AGCCAAGTTATCagagaaagaaaacaaagaaatagtCGTCGAGAATCCAC
CATGACTTATGAGGAGGATAACGTACCAGCTCTTGATTGTAAAGATGTTT
CACACTTGTTGTTGTACAAGAAGGAAGTTGAAAAGAAGTACCCAATGCTG
TGTGGTGGAACTGTTGATGCTCTGGTTGTTTTTGCAACTCAAGTTGATTC
TGATGATGTGTTTTATAAAGCTTTTCTTGCCACCTACCGGACATTTATTT
CACCTGCTGAATTGATCTGTAAACTGCTTTACAGAGCTAATCGATTccag
acaaaagggaaattgaaTTCAAGTATCTCAATGAAGGTTTTGAAGTTGCT
TGTACAAGTTTTTGATGAAATGTTTGAGGAACTAGATAAATCTTTATTTG
ATCAATTAAGATCACAGGTTCATAGATTACTGAATACTGGAGAGTTGCAG
CTTGGTAAAAATTTACGCGACAAACTTGTTGGATACTGTATAAAGCTTCA
ACAAAATCATTTACCATCTTATCAACCTGTAGAGAGCACTGCTgaaattt
tcgaatttaaaagttttgagtTATCTCAACAAATGTGTCTACTTGATGCA
GATTATTTCAGGAAAATTGAACTTCCAGAAGTTTTGCGCTGGGGAAAAGA
ACAAAGTGAGACATTCAGTCCTAACCTAAGCAGATTCATTGGTCATTTCA
ACAGTATGTCATTCTGGGTTCGAACCTTAATCTTGAAAGAAACCAGACAA
GCAGAACGTGAGaaaatgtataagaaatttttgaaaattatgaggATACT
GAAAAGACTAAATAATTTTAGTTCCTTCCTGGCCATCCTCTCTGCGCTTG
ACTCTACTCCAATACGAAGGCTAGAATGGCCTAAACAATACACTGAACTC
TTACTTGAAGACTCAAAACTCATTGAAAGTTCTTCTGGTTTCAAACTTTA
TAGGGAAGCATTAGCAGGAGCTAAATTACCATGTATCCCATATTTGGGTC
TTATTTTAACTGATATCACATTTGTCCATCTTGGGAATAAGCATGAGCTC
CCAGATGGTAAAATTAACTTTGTTAAACGATGGCAACAATTTAATATATT
GGATAGTGTGAGGCGATTCAAAGAAGGTTTATATGATTacgagaaaaatg
agaaaattttggacttttttaatGAGTATGAAGATCACATGGATGAGGAT
GAAATGTGGGACCAATCACTTGTCCTCAAACCCAGAGGGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014458-exon-sc0000187-1491911889:248198..251889 | TCONS_00014458-exon-sc0000187-1491911889:248198..251889 | Clytia hemisphaerica | exon |
| TCONS_00014458-exon-sc0000187-1510915933:248198..251889 | TCONS_00014458-exon-sc0000187-1510915933:248198..251889 | Clytia hemisphaerica | exon |
| TCONS_00014458-exon-sc0000187-1575043694:248198..251889 | TCONS_00014458-exon-sc0000187-1575043694:248198..251889 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:248198..251889 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005085 | guanyl-nucleotide exchange factor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007264 |
small GTPase mediated signal transduction |
| molecular_function |
GO:0005085 |
guanyl-nucleotide exchange factor activity |
Blast
BLAST of TCONS_00014458 vs. Swiss-Prot (Human)
Match: RPGF1 (Rap guanine nucleotide exchange factor 1 OS=Homo sapiens GN=RAPGEF1 PE=1 SV=3) HSP 1 Score: 347.436 bits (890), Expect = 1.250e-100 Identity = 184/379 (48.55%), Postives = 254/379 (67.02%), Query Frame = -2
Query: 740 PMLCGGTVDALVVFATQVDSDDV--FYKAFLATYRTFISPAELICKLLYRANRFQT-KGKLNSSISMKVLKLLVQVFDEM-FEELDKSLFDQLRSQVHRLLNTGELQLGKNLRDKLVGYCIKLQQNHL----PSYQPVES------TAEIFEFKSFELSQQMCLLDADYFRKIELPEVLRWGKEQSETFSPNLSRFIGHFNSMSFWVRTLILKETRQAEREKMYKKFLKIMRILKRLNNFSSFLAILSALDSTPIRRLEWPKQYTELLLEDSKLIESSSGFKLYREALAGAKLPCIPYLGLILTDITFVHLGNKHELPDGKINFVKRWQQFNILDSVRRFKEGLYDYEKNEKILDFFNEYEDHMDEDEMWDQSLVLKPR 1834
P + GG+ D L+V AT+ D D+ + +AFL TYRTFISP ELI KL YR +F +S +LV+V DE+ EL + + L V RL+ GEL L + LR ++ K+ Q L S QP+ + + +F S E+++Q+ LLDA+ F KIE+PEVL W KEQ+E SPNL++F HFN+MS+WVR++I+ + + +RE++ KF+KIM+ L++LNNF+S+LAILSALDS PIRRLEW KQ +E L E LI+SSS F+ YR AL+ + PCIPYLGLIL D+TFVHLGN + DGK+NF KRWQQFNILDS+R F++ YD +N+ I++FFN++ DH+ E+ +W+ SL +KPR
Sbjct: 690 PDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNILD---KVDQKKLLRCATSSQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYI-DGKVNFSKRWQQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPR 1064
The following BLAST results are available for this feature:
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