TCONS_00014461 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014461
Unique NameTCONS_00014461
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length424

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014461 ID=TCONS_00014461|Name=TCONS_00014461|organism=Clytia hemisphaerica|type=transcript|length=424bp
gccgttttcaaatttatcctgCCTCctatttttttccctttttacagggg
tggtacagtcactttcggccggggttgtggacggcaaaatatgaaatttg
tcgttcttttttgtcgttttttatgaaatttgtcgttctttttgtctatt
tttagtaatgcaggaattGTAATATAGAGCCTCTCTTACAGTCTTAGTGA
ACTTGTGTAGACGCCGAGAGTATAGTCTAGTTGTTTACTCAACTAAATCA
GAAGGCTTGACGTCAGTAGACATCAGATAAGGTGATAAGTTTTTGAGTAG
ACTGTGTATAGAAAATGAACATTGATAAGAGTAAGCTGGTTTCTGCAGAT
TACAGTTTGGATGTTCAGTTTTATTCACAAAtagtcatttttgaaaaaat
cttcataGTACAAGTCGCCTTTTT
Run BLAST on NCBI

transcript from alignment at sc0000187:295131..295554

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014461 ID=TCONS_00014461|Name=TCONS_00014461|organism=Clytia hemisphaerica|type=transcript|length=424bp|location=Sequence derived from alignment at sc0000187:295131..295554 (Clytia hemisphaerica)
AAAAAGGCGACTTGTACtatgaagattttttcaaaaatgactaTTTGTGA
ATAAAACTGAACATCCAAACTGTAATCTGCAGAAACCAGCTTACTCTTAT
CAATGTTCATTTTCTATACACAGTCTACTCAAAAACTTATCACCTTATCT
GATGTCTACTGACGTCAAGCCTTCTGATTTAGTTGAGTAAACAACTAGAC
TATACTCTCGGCGTCTACACAAGTTCACTAAGACTGTAAGAGAGGCTCTA
TATTACaattcctgcattactaaaaatagacaaaaagaacgacaaatttc
ataaaaaacgacaaaaaagaacgacaaatttcatattttgccgtccacaa
ccccggccgaaagtgactgtaccacccctgtaaaaagggaaaaaaatagG
AGGcaggataaatttgaaaacggc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008087XLOC_008087Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014461-exon-sc0000187-1491911889:295131..295554TCONS_00014461-exon-sc0000187-1491911889:295131..295554Clytia hemisphaericaexon
TCONS_00014461-exon-sc0000187-1510915933:295131..295554TCONS_00014461-exon-sc0000187-1510915933:295131..295554Clytia hemisphaericaexon
TCONS_00014461-exon-sc0000187-1575043694:295131..295554TCONS_00014461-exon-sc0000187-1575043694:295131..295554Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:295131..295554 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.967575	0.48274	2.98428	2.26941	4.17047	2.6694	2.72465	2.94357	1.10286	0.424647	1.2377	1.74543	0.934494	0	0.426866	0.278886	0.319299	0.439794	0.546986	1.54424	1.46902	1.40844	0	0.591008	0	0.641339	0	0.288702	0.184429	0.661885
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014461 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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