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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014465 ID=TCONS_00014465|Name=TCONS_00014465|organism=Clytia hemisphaerica|type=transcript|length=904bp
GAACCGCCAACAGTTTATTTTCTTTCAGGTAACGTTTTGTAAGGGATAAG
TTAcagttttttcataaaaagctCTGTGAAAACCTAAAGAAAGCCATAGA
TGAAGAATATTTGTCAAACTATTTTATTCCCGGGCAAATTTTGTGTCAGC
TGATTGATAaggaaaagtttgaaagtttcaaagaGAAATTCAATAATACC
AGTCTAGATACGAAATTCCAAAATCACAGTAATGCAGAAATCTCGAATCG
CCAATGTGTAAAATTCTTAAATTGTCGAGATGTCCAAATTACCATTAATA
ACAATATAACTGACGATGACGCTGTTCTTTCCTGTTTGGccgaaagttat
tttcaaataatacgACTGGTACATTACATGGCCTATTGGAAATCTTCCGT
CGGAATAACGTGCGAAATGACGCCACAAATATACATATATCATATGAGTA
GACCTTTTCAAAACTTGGTTAGAATCAATTCATATTTTGGTGAGCCACCa
ataaatgaaaatgacttTGTTGCATACATCAGGGAGCTGACATTGATAAA
TTTTGGTACATATTCTATTCGAGACTCCTGTCTTACAATATGTAGGCGTG
GATATTTTTCTTCGAAAGGGTCTTTTGCACAATCCATTCGTGAACTTAAC
GAAAAACACAAAACGGTTATTTTTTGGATAGATCGAATCATCACTCGAAT
TGAACGAGATCTTCAAcaccaaaacaaaacatcacttttaccaaaaaaga
caaagaagaaacatttcaaaaagcttttgaaaaaccCTAGTACTGTTTTA
CAACATAGTCATTACTCCATTCAAAAACCTCGTGTAAGGGGGCAACAAGC
CTGTTGGATCATTCCAATCATAGTTATTTTGGGTATTGCTATTGTTGTGA
TTGT Run BLAST on NCBI protein sequence of TCONS_00014465-protein >TCONS_00014465-protein ID=TCONS_00014465-protein|Name=TCONS_00014465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=175bp
MAYWKSSVGITCEMTPQIYIYHMSRPFQNLVRINSYFGEPPINENDFVAY
IRELTLINFGTYSIRDSCLTICRRGYFSSKGSFAQSIRELNEKHKTVIFW
IDRIITRIERDLQHQNKTSLLPKKTKKKHFKKLLKNPSTVLQHSHYSIQK
PRVRGQQACWIIPIIVILGIAIVVI Run BLAST on NCBI transcript from alignment at sc0000187:401732..402635 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014465 ID=TCONS_00014465|Name=TCONS_00014465|organism=Clytia hemisphaerica|type=transcript|length=904bp|location=Sequence derived from alignment at sc0000187:401732..402635 (Clytia hemisphaerica)
ACAATCACAACAATAGCAATACCCAAAATAACTATGATTGGAATGATCCA
ACAGGCTTGTTGCCCCCTTACACGAGGTTTTTGAATGGAGTAATGACTAT
GTTGTAAAACAGTACTAGggtttttcaaaagctttttgaaatgtttcttc
tttgtcttttttggtaaaagtgatgttttgttttggtgTTGAAGATCTCG
TTCAATTCGAGTGATGATTCGATCTATCCAAAAAATAACCGTTTTGTGTT
TTTCGTTAAGTTCACGAATGGATTGTGCAAAAGACCCTTTCGAAGAAAAA
TATCCACGCCTACATATTGTAAGACAGGAGTCTCGAATAGAATATGTACC
AAAATTTATCAATGTCAGCTCCCTGATGTATGCAACAaagtcattttcat
ttattGGTGGCTCACCAAAATATGAATTGATTCTAACCAAGTTTTGAAAA
GGTCTACTCATATGATATATGTATATTTGTGGCGTCATTTCGCACGTTAT
TCCGACGGAAGATTTCCAATAGGCCATGTAATGTACCAGTcgtattattt
gaaaataactttcggCCAAACAGGAAAGAACAGCGTCATCGTCAGTTATA
TTGTTATTAATGGTAATTTGGACATCTCGACAATTTAAGAATTTTACACA
TTGGCGATTCGAGATTTCTGCATTACTGTGATTTTGGAATTTCGTATCTA
GACTGGTATTATTGAATTTCtctttgaaactttcaaacttttcctTATCA
ATCAGCTGACACAAAATTTGCCCGGGAATAAAATAGTTTGACAAATATTC
TTCATCTATGGCTTTCTTTAGGTTTTCACAGagctttttatgaaaaaact
gTAACTTATCCCTTACAAAACGTTACCTGAAAGAAAATAAACTGTTGGCG
GTTC Coding sequence (CDS) from alignment at sc0000187:401732..402635 >TCONS_00014465 ID=TCONS_00014465|Name=TCONS_00014465|organism=Clytia hemisphaerica|type=CDS|length=525bp|location=Sequence derived from alignment at sc0000187:401732..402635 (Clytia hemisphaerica)
AATCACAACAATAGCAATACCCAAAATAACTATGATTGGAATGATCCAAC
AGGCTTGTTGCCCCCTTACACGAGGTTTTTGAATGGAGTAATGACTATGT
TGTAAAACAGTACTAGggtttttcaaaagctttttgaaatgtttcttctt
tgtcttttttggtaaaagtgatgttttgttttggtgTTGAAGATCTCGTT
CAATTCGAGTGATGATTCGATCTATCCAAAAAATAACCGTTTTGTGTTTT
TCGTTAAGTTCACGAATGGATTGTGCAAAAGACCCTTTCGAAGAAAAATA
TCCACGCCTACATATTGTAAGACAGGAGTCTCGAATAGAATATGTACCAA
AATTTATCAATGTCAGCTCCCTGATGTATGCAACAaagtcattttcattt
attGGTGGCTCACCAAAATATGAATTGATTCTAACCAAGTTTTGAAAAGG
TCTACTCATATGATATATGTATATTTGTGGCGTCATTTCGCACGTTATTC
CGACGGAAGATTTCCAATAGGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014465-exon-sc0000187-1491911889:401732..402635 | TCONS_00014465-exon-sc0000187-1491911889:401732..402635 | Clytia hemisphaerica | exon |
| TCONS_00014465-exon-sc0000187-1510915933:401732..402635 | TCONS_00014465-exon-sc0000187-1510915933:401732..402635 | Clytia hemisphaerica | exon |
| TCONS_00014465-exon-sc0000187-1575043694:401732..402635 | TCONS_00014465-exon-sc0000187-1575043694:401732..402635 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:401732..402635 . |
Blast
The following BLAST results are available for this feature:
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