TCONS_00014476 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014476
Unique NameTCONS_00014476
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014476 ID=TCONS_00014476|Name=TCONS_00014476|organism=Clytia hemisphaerica|type=transcript|length=3187bp
AAGAGATCATTCATTCTGATTGATGACAAAAGACAAATACCAACTCGTCG
GgtattttttatggaaatttttacatttgaatTGACCAAAAGAACTTTGA
GCTGTGAGAATTTGACCAGCGAAATCGAAAACGAACTCGATCGTCTGTAT
TGCTTTTTGTGTTGAACGAGAGAGAAAAACACAAACTTCTTCTAAACATA
TGTCGTTGAAGTGAACGCTTACAATTTGTTATTGAGAAACGTTTTCCAAC
ATTTTATTTCCCTTCGATGATGGCTTttattgatcaaaaataaatgtTTC
CGCCAGGAGAATGGTGAAGTCAAGCCTTCCACACAAAGGACGAATGGTAA
CTTGGCATCAGCAGCATCGATATTCAACAAGAAAGACTCTACAACTGACA
CTCATCCCGCTGGCACTAATAAAACAGCCAACGGTGATACACAACGAGCA
AGAGACCGGTTTCGCCAGGCTGGCATGAAAGCGAGGCTGGCACGAAGGAT
GGAGAAAATTGCAGAAGATAGAATGACCATCAGTCAAATATTTAACAGAT
ATGTCGATAATTCAACACTTCACGGATTCAGATTTATTTTCATGAAAACG
TTTTACGTCCGTCGTTTTTTATGGTTTGCATTGACGTGTGGTATGGCTTG
TTTGTTTTTCATGGAGTTGGAGAAAAGTATTGCTCTTTTCTACCAATATC
CATTCACAACTTTATCCACTATAGAATATGTACCCCAATTGAAATTTCCA
GCTATCAGTTTATGCAATTTGAACAATTATCAAGTTTCCAAAATACGAAA
AAGTAAACTTAAAGGACTTTACGAGAAAGGTTTATTTCCATTTCACGGTG
AGCCTTTTGACCCTGGCTTCGAGCTAACGGGTGAAGAGCTCTTACAAAAT
ATGAAAGCATCATCACAGAGTATAGACTACATTTTAAAGGGATGTGAATG
GAAAAGTAGAGACACTGCCAAAACAGGCAAACCAAATTTTTGTGGTGCTA
TGAATTTTACGAGGTTCAGTAACCTTGAAGGTCAAACTTGTTATACGTTT
AATTCCGGTATCAACTCTGACATTCTCACTTTGAACGAGACAGGACTTAA
TATGGCGTTCAAACTCGAGTTAGATTTACAAGTGAAAGATTCTGTGCAAA
GTTTGGAAGAGGTAGGAGTGAACATTGTTATTCATGATCAAGACGAGACG
CCTCTTCACCATGCAGGATTCATTGTTTCTCCTGGATTTCAAACTTTCGT
CGAAATGAAAGTCAAAAAGACGGAGAATTTGAAGCCACCGTACGCAACAA
AATGTGGTTCGATGAACTTGAAATATACAGATGACTATCGACAATCTCAA
TGTTTCATTGAACAACTCAATAATGAAGTTATCCATCATTGCGGATGTAG
AGGAGAGTTCATGAAAGAGCCATCTGATGTTCCATATTGTACGATGAATG
AAACTATACATTGTCTACTACCAACCATTCATCATTTTGATCGGAAGACA
AGCCAATCATGTCCGGTAGATTGTGAAACAGTTCAATACACCACTGCACT
TTCCTATGGTCGTTTTCTTTCGAGCCCCCCTATCGGTACAAACTTGGTTC
GCAATGGAAGCACCGCATACATCAACGAGCTGAAGAAGACCATGGATTCC
TCAGAACTGAGAAAATATATAGAGGAGAATATTGTGGTGGTGCAATTCTT
TTACCAAGAGATGAAGGAAGAGAATGTGATACAAGAACCAAGTTATGATT
TCTATAAACTTGTTGGTGACGTTGGAGGACAGCTCGGTTTGATGTTGGGA
GCCAGTGTTTTGACGTTAGTGGAATTTGTTGATTTGTTTCTGTTCACATT
ATATCATCAATTATTAAGACTTtcacgaaaaaagaaaaaggagagTGAAG
TGAAGGAAGCAAACAACAACAATTCGAATGGGACAACTAAATTGATGGAT
ACTTGAAACCAAACTCTTTCTTATTGAAGAGACCGAAGGTGATACGACAT
GGCACCAATCTAAGGAATTCAGTCAAAATGGATTCGAGGgttcttttgaa
ttttcattcaaaatatacTCTCCAATAATTGAAATATCGAGAATATCACA
GAGCGTATGAAACATCGACAAAAGANGCCAAGAATTGAAATATCGAGAAT
ATCACAGAGCGTATGAAACATCGacaaaagataatgaaatttGAAGTTAG
CCATTCTAAAAACAACAATATGTCATTAAAATCGGAATTTCGTAATATCT
AGATACCTCTCGCATGTCATAGATTGAGCTTTTAATGCTCTAGCGATTGA
CTTAATTGATTGActgcaaaaaaggaaaagatgTGCTTAAAGAGCAGCCA
AAGTTTACTTTACGAGTTATTTGTATAAAATAtcattgtaaatattttta
tttaagaTCTTTTACATCCTTTATCAAATgtataattaaaattttattac
aaaaacaatttaaaaatacgatatttttgcaaaattcatTGTCTGTCATT
TTTAAAGAAGGTAAGATTTATTATTAGTATTCTGGGTGGTGAAAAGTCCG
AGAAATTTTCTACTGTACGTGTATCAGAGATTTCCGCTACATTTGTTAGT
TTGTTATCTTGTTCTCTAAATAGAAAGTACTCTGATGAAATTgcgaaaaa
aaaggaaaattagcTTTCGTATTCTAATTTGGATCAGTCATTGCATTACA
GACATCATTAACATTAAGGATTGCGAAATCAAAGAGAGGCGTAACGCGTT
CAAGAATTATTAATGGAAAAGATGTTCATTAATGAAGTAGACAGAGATCG
AAGGAGATAAAACTGAACTCAATTGTTCCATTTTAAGACAACATAAGCAC
TCAGCCCACAGAAGGTTAGTATAGACAATGAAGCGACCCCTACGAGAATA
TAATAGGTATTTCTTTGTTCAGTGAAAGCTCCTGAAAGAAGGATGTCTTC
AAATCTTACTATGTCTTTGGGAACGTATGAAGTATCCAATCGTCTGATTA
TCTCGTCTGCCGCCCTCTCACCTGACTGAACCGCCCCACTGACGAAGCCA
CGCCACAATGTAGCCGTCTCCGTACCGGCAAAATGAGTTCTATGTACAAA
GTGTAGGACaagcaaaatacaaaaaatctaAATCTTAGATTTAGTTTTCA
ACGAATTGGAATTGTATGAACCATAGAAGGTTACCAA
Run BLAST on NCBI

transcript from alignment at sc0000188:89185..96287+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014476 ID=TCONS_00014476|Name=TCONS_00014476|organism=Clytia hemisphaerica|type=transcript|length=7103bp|location=Sequence derived from alignment at sc0000188:89185..96287+ (Clytia hemisphaerica)
AAGAGATCATTCATTCTGATTGATGACAAAAGACAAATACCAACTCGTCG
GgtattttttatggaaatttttacatttgaatTGACCAAAAGAACTTTGA
GCTGTGAGAATTTGACCAGCGAAATCGAAAACGAACTCGATCGTCTGTAT
TGCTTTTTGTGTTGAACGAGAGAGAAAAACACAAACTTCTTCTAAACATA
TGTCGTTGAAGTGAACGCTTACAATTTGTTATTGAGAAACGTTTTCCAAC
ATTTTATTTCCCTTCGATGATGGCTTttattgatcaaaaataaatgtTTG
TGAGTAttatactttctttttctttttcttcttcaaatctTTTCCAAACA
TTATTCATGCTACTCCAGTTTGAAATGTAAATAGAGTGCAAGAAAGAGAG
ACAAACTTGATGAAGGCTGAACGTTAGATGGTGTCGAGGGGAAGGaatta
aaagtttgttttataTGCTAGTGTACAAGgtcaaaaataaactttttgag
AGTGGAGTCATCATTTTGTCGGCAGCACTTCACTCATTAAAAGCTCCTTG
ATAACAAGCAGTCAGATTAAAGTCTCATTGAGAGTGATGATTAATGGAAA
GAAAACTTTGTTAAATATATCAAAACAGTAGTGAACCAACTAAACTTTAC
AATATTCCTAACATGGATAGCTTATCAAGAACTTGTTAAATCATTGAGAA
AATACGTTTGAAAAGAAAGGAGTTagtgaaacaaaaaaaagattaagtta
caaaaaagttgacgatgaaaacaaacttttgaaaTGAAACAACGACTTTT
CTCGACCTTTTCAGATCAGGAAGGAACagatttacaagttttttttggaa
agtggAAGTGACCACTTTGAATTGATTTATGATTACTAAGGGATGATTCT
TCAATTTCGAAGTCGATTAGTAAAATCCATTTGATTAAACTAATGGATAT
ACATAATTTCAagtcttttttaaataaaatggaTTATCGATTTTGAGCTT
TTGATAGAAAAGGATAATCTTCATAGGACAGGAGCCAAACACTTTTCCCA
TCTGATAAAATCGCTAAGTTACATGTATTGAGAGaggtattttgttgttg
ttgaaactGTTTCGATGGATTCGTATATAGAGTGAAATAAAAATAGATAG
GAGATGACAAAGAAGGACGAAGTGATGATGTTTGGACGAGCCAATCGAAT
GAAGAATAAAGACGATGGCAGTATCATCCTACCACCAAACATAGTGCATG
AATATGAACAACTTGCTAAAGAGCCTTCTTTACTAAAGAATATGGACAGT
ACTAAAGATCAGGTTATAAACAAGTCAGAAggtgaaaataataataataa
gaacGCAGATCCTGATACAGCAGTTATTAagaatttgtctaaaaaatatg
GTCTTCCGTTTTCTCTTAACCATAGCCGCCAGGAGAATGGTGAAGTCAAG
CCTTCCACACAAAGGACGAATGGTAACTTGGCATCAGCAGCATCGATATT
CAACAAGAAAGACTCTACAACTGACACTCATCCCGCTGGCACTAATAAAA
CAGCCAACGGTGATACACAACGAGCAAGAGACCGGTTTCGCCAGGCTGGC
ATGAAAGCGAGGCTGGCACGAAGGATGGAGAAAATTGCAGAAGATAGAAT
GACCATCAGTCAAATATTTAACAGATATGTCGATAATTCAACACTTCACG
GATTCAGATTTATTTTCATGAAAACGTTTTACGTCCGTCGTTTTTTATGG
TTTGCATTGACGTGTGGTATGGCTTGTTTGTTTTTCATGGAGTTGGAGAA
AAGTATTGCTCTTTTCTACCAATATCCATTCACAACTTTATCCACTATAG
AATATGTACCCCAATTGAAATTTCCAGCTATCAGTTTATGCAATTTGAAC
AATTATCAAGTTTCCAAAATACGAAAAAGTAAACTTAAAGGACTTTACGA
GAAAGGTTTATTTCCATTTCACGGTGAGCCTTTTGACCCTGGCTTCGAGC
TAACGGGTGAAGAGCTCTTACAAAATATGAAAGCATCATCACAGAGTATA
GACTACATTTTAAAGGGATGTGAATGGAAAAGTAGAGACACTGCCAAAAC
AGGCAAACCAAATTTTTGTGGTGCTATGAATTTTACGAGGTTCAGTAACC
TTGAAGGTCAAACTTGTTATACGTTTAATTCCGGTATCAACTCTGACATT
CTCACTTTGAACGAGACAGGACTTAATATGGCGTTCAAACTCGAGTTAGA
TTTACAAGTGAAAGATTCTGTGCAAAGTTTGGAAGAGGTAGGAGTGAACA
TTGTTATTCATGATCAAGACGAGACGCCTCTTCACCATGCAGGATTCATT
GTTTCTCCTGGATTTCAAACTTTCGTCGAAATGAAAGTCAAAAAGGTATT
GTTTATTTATCCAATCTACTATGTTAATGATAGCTGTCAACACAATTTAT
TTAATTGCAAAACGTTCAAAACCTAAGTATAAAGTTTAGAGAAGACCGAA
GCTCATAGATTTTTTATCAAGACTAAAATTTGGATCAGTTCAAACACCCA
AAGGACttctttttaaaggttttcacAGGCGTACGCAAAATCGTAGAGGG
TGTCTACGGATAGCAAATAATTCAGAAAAATAATAAGGCCAAAATTTGCC
GTCAATATAAAAATGGTATGTAAATACGTATCAAAGAGGACTGTTATTAA
ATCCGGAGAAGGGTAAGTTAGATAATTTTCAAGCACATGTGgggtttgaa
atggttttaaaCACAGTCAAATAGAAGGTACTtagtttcatttgtttatc
attaTAGACGGAGAATTTGAAGCCACCGTACGCAACAAAATGTGGTTCGA
TGAACTTGAAATATACAGATGACTATCGACAATCTCAATGTTTCATTGAA
CAACTCAATAATGAAGTTATCCATCATTGCGGATGTAGAGGAGAGTTCAT
GAAAGGTATACAAATATGTCTACCCCCctccaattcatgatatgcaccaa
tacaatgacttcacgaaattatgcaacttttctgttttcgttccacccaa
tacgtcactttttccattgtttaagtgacgtattcggtggaaaattctaa
aagttttcagaagacactccagtggtgcatatcatgaatatgttCCTTGT
GGTTTGAAAAATACCGTATGACTTGACTTGAAGCTAACGTTTgttctttt
gattttcaaaagaatctACAGAAAAATTACATAAGGTCATCTAGTTAGCT
TGGGATGACAAATGATAGAGGGcatcatattttcatattatgtAAAAACT
AATAACATTCTTTACCGAGTCAAcactaaaatataatttttgccaTCTTT
ATCGTCAGTTCGAACTTGACTAGACTGTGACAAATATCGTATCATGATAA
TTATCGAATAACTTCTAGTCACCACATGCTAAATTTATTAGAGAAAGCTT
AGCTAATTAGGACAGTATACTCTGATTACGAAAGATATAGAGGCTAAGCT
TTTTACTCAAACTAGGCTTTAAATCTCCCCCTTAAAGTCAGAGGAAAGAG
AGGTTTTCACTGatacaaaaaaaatctttaaaaaacccTCTCACAAATCA
AGTGTTTTCTGACATTACTCTAAGGTATTATTATTTCCACCATAGAGCCA
TCTGATGTTCCATATTGTACGATGAATGAAACTATACATTGTCTACTACC
AACCATTCGTAAGTAACAACTTCCCCTTATCACCAATCCATCCTTCACTG
AAATTAAGAATTCCGACAAAACGGAAGATAAGTTCAGGTTGAAAATGAAG
GACTTTTTTATTATTCAGgtattcatcaattttaattaatGGAAACTACT
GGAGCCAATCACAGTCTTCAGTACATTTTGAACAGCAGGCCATCCTTCTT
TCCAAATTATCTTCTTCATTGATAAGAAAAAGACGTTTTCGAAAACGAGG
GGTCGTACTGTCTATTTAACAAAGTCCAGTAATTTGGATTAATCCGTTTA
CCTGTTCGCAAGGCCATTACATTAAATTACTTTAATGCTCAGACCACCTT
TTTCGGTCCCTAaacctacaatcatggtcgaaatatattgaaattttagt
ttattttaacgtttttcagaatctaaagttcgggcgagaatttctatttt
agcacttccactttctttcattgaatatttcgattttagaggggtttggt
ggcttctacgctatatttcaagccttattccagcaaatttgagcttttaa
atcctgagatcttaaggtcctaagtcttaagtctcatgttaaaactcaga
gtttaaACTCTACTTCAAACTATAGTTTAacacgcttaaaaatcatttgt
agtgtttaaaatttcacctGGAaatcccttttgtctcaaatattttgtcc
atgattgtaacaTGAAAAGATGAGTGTCAAGATGAGTGTCTTCGTATATA
TACGATATATCGAAATAAACGATCCCTCTGTTTTGCAGATCATTTTGATC
GGAAGACAAGCCAATCATGTCCGGTAGATTGTGAAACAGTTCAATACACC
ACTGCACTTTCCTATGGTCGTTTTCTTTCGAGCCCCCCTATCGGTACAAA
CTTGGTTCGCAATGGAAGCACCGCATACATCAACGAGCTGAAGAAGACCA
TGGATTCCTCAGAACTGAGAAAATATATAGAGTGAGTATGATTGGCAGAC
TGTCCAAAAGTTTTGTACATTTTATTAACTTTAagattagattttgaaaa
aagtacccATTTTAAAGGCGCCGAAAAGTTTACAAAGATATTCCCACAGA
TTCACAAACCCATTCCATTTTCATTCTCATTCTATATCACCTTAGTTTTG
ATTTTAAGTACCCCTTCCAAAGGCGCTTGACTTGAAAATTTAGCAAGGAT
ATTCCTAAGGTGTCTACGGAAATCTTTTTCATAGTTTCAACATTTCTAAA
CCAAATTTAAAAGAATCTTTAAGCTCGATACTCAAATTGATTCTAATATT
CTTGAATGATTTGAATGTTCTTTCCATAAAACGATTATGAGCAAAGATAG
CAAAATCATATTGTTTAGGAAAAAACAGTCCAAAATTGCATTCAAAAGCC
AAGATAAAAACACGACAAACCTATTGCGAAAATCAcgcttttcaagattt
caaggTTCCTAAGTAAAGGTTTCTctgaaattttataattttcgaAGATT
TCAACGTTGTGGGAGGGGGTTatgattttcaaggttttcaataAGAAGCT
GTCTTCTAACAGGTTCACAAATCCCTTTTTTCTACAGGGAGAATATTGTG
GTGGTGCAATTCTTTTACCAAGAGATGAAGGAAGAGAATGTGATACAAGA
ACCAAGTTATGATTTCTATAAACTTGTTGGTAAGAATCTTCTACTACTCC
CTCCTCTCTCCATTGCAAGATGGGAATAGAAAATGGTTTAGGTGAAATTT
CGTTTTTCTTAAATCATCACAACAAACTGTGAATTATAAATGGagataaa
caaacattttaAACTTAAGACGGAGACCTGTATGATCATGTCTGACGACA
GCTAACTGATTAGTTTATTTATCcgaaagattttgatttttcaacatCTC
CGTTCTAATCCAAATCTTGCTGACCCCTTTCTGATTAAATATCCccgaaa
aaataaataacaaactCCTTTTGATTTATAGGTGACGTTGGAGGACAGCT
CGGTTTGATGTTGGGAGCCAGTGTTTTGACGTTAGTGGAATTTGTTGATT
TGTTTCTGTTCACATTATATCATCAATTATTAAGACTTtcacgaaaaaag
aaaaaggagagTGAAGTGAAGGAAGCAAACAACAACAATTCGAATGGGAC
AACTAAATTGATGGATACTTGAAACCAAACTCTTTCTTATTGAAGAGACC
GAAGGTGATACGACATGGCACCAATCTAAGGAATTCAGTCAAAATGGATT
CGAGGgttcttttgaattttcattcaaaatatacTCTCCAATAATTGAAA
TATCGAGAATATCACAGAGCGTATGAAACATCGACAAAAGANGCCAAGAA
TTGAAATATCGAGAATATCACAGAGCGTATGAAACATCGacaaaagataa
tgaaatttGAAGTTAGCCATTCTAAAAACAACAATATGTCATTAAAATCG
GAATTTCGTAATATCTAGATACCTCTCGCATGTCATAGATTGAGCTTTTA
ATGCTCTAGCGATTGACTTAATTGATTGActgcaaaaaaggaaaagatgT
GCTTAAAGAGCAGCCAAAGTTTACTTTACGAGTTATTTGTATAAAATAtc
attgtaaatatttttatttaagaTCTTTTACATCCTTTATCAAATgtata
attaaaattttattacaaaaacaatttaaaaatacgatatttttgcaaaa
ttcatTGTCTGTCATTTTTAAAGAAGGTAAGATTTATTATTAGTATTCTG
GGTGGTGAAAAGTCCGAGAAATTTTCTACTGTACGTGTATCAGAGATTTC
CGCTACATTTGTTAGTTTGTTATCTTGTTCTCTAAATAGAAAGTACTCTG
ATGAAATTgcgaaaaaaaaggaaaattagcTTTCGTATTCTAATTTGGAT
CAGTCATTGCATTACAGACATCATTAACATTAAGGATTGCGAAATCAAAG
AGAGGCGTAACGCGTTCAAGAATTATTAATGGAAAAGATGTTCATTAATG
AAGTAGACAGAGATCGAAGGAGATAAAACTGAACTCAATTGTTCCATTTT
AAGACAACATAAGCACTCAGCCCACAGAAGGTTAGTATAGACAATGAAGC
GACCCCTACGAGAATATAATAGGTATTTCTTTGTTCAGTGAAAGCTCCTG
AAAGAAGGATGTCTTCAAATCTTACTATGTCTTTGGGAACGTATGAAGTA
TCCAATCGTCTGATTATCTCGTCTGCCGCCCTCTCACCTGACTGAACCGC
CCCACTGACGAAGCCACGCCACAATGTAGCCGTCTCCGTACCGGCAAAAT
GAGTTCTATGTACAAAGTGTAGGACaagcaaaatacaaaaaatctaAATC
TTAGATTTAGTTTTCAACGAATTGGAATTGTATGAACCATAGAAGGTTAC
CAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008099XLOC_008099Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014476-exon-sc0000188-1491911889:89185..89483TCONS_00014476-exon-sc0000188-1491911889:89185..89483Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1510915933:89185..89483TCONS_00014476-exon-sc0000188-1510915933:89185..89483Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1575043694:89185..89483TCONS_00014476-exon-sc0000188-1575043694:89185..89483Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1491911889:90610..91579TCONS_00014476-exon-sc0000188-1491911889:90610..91579Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1510915933:90610..91579TCONS_00014476-exon-sc0000188-1510915933:90610..91579Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1575043694:90610..91579TCONS_00014476-exon-sc0000188-1575043694:90610..91579Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1491911889:91992..92139TCONS_00014476-exon-sc0000188-1491911889:91992..92139Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1510915933:91992..92139TCONS_00014476-exon-sc0000188-1510915933:91992..92139Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1575043694:91992..92139TCONS_00014476-exon-sc0000188-1575043694:91992..92139Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1491911889:92830..92892TCONS_00014476-exon-sc0000188-1491911889:92830..92892Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1510915933:92830..92892TCONS_00014476-exon-sc0000188-1510915933:92830..92892Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1575043694:92830..92892TCONS_00014476-exon-sc0000188-1575043694:92830..92892Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1491911889:93673..93865TCONS_00014476-exon-sc0000188-1491911889:93673..93865Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1510915933:93673..93865TCONS_00014476-exon-sc0000188-1510915933:93673..93865Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1575043694:93673..93865TCONS_00014476-exon-sc0000188-1575043694:93673..93865Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1491911889:94472..94563TCONS_00014476-exon-sc0000188-1491911889:94472..94563Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1510915933:94472..94563TCONS_00014476-exon-sc0000188-1510915933:94472..94563Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1575043694:94472..94563TCONS_00014476-exon-sc0000188-1575043694:94472..94563Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1491911889:94866..96287TCONS_00014476-exon-sc0000188-1491911889:94866..96287Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1510915933:94866..96287TCONS_00014476-exon-sc0000188-1510915933:94866..96287Clytia hemisphaericaexon
TCONS_00014476-exon-sc0000188-1575043694:94866..96287TCONS_00014476-exon-sc0000188-1575043694:94866..96287Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000188supercontigsc0000188:89185..96287 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0161159	0	0.0253314	0	0	0	0	0	0	0	0	3.4202	1.51475	0	0	0.773276	1.17387	4.34671	5.00691	2.49338	1.24509	1.13292	1.40455	0.587874	0.845341	0.126971	0	0	1.21519e-09
Blast
[Close]
BLAST of TCONS_00014476 vs. Swiss-Prot (Human)
Match: ASIC3 (Acid-sensing ion channel 3 OS=Homo sapiens GN=ASIC3 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.043e-49
Identity = 138/478 (28.87%), Postives = 222/478 (46.44%), Query Frame = 1 
Query:  514 EDRMTISQIFNRYVDNSTLHGFRFIFMK-TFYVRRFLWFALTCGMACLFFMELEKSIALFYQYPFTTLSTIEYVPQLKFPAISLCNLNNYQVSKIRKSKL--KGLYEKGLFP---------FHGEPFDPGFELTGE-ELLQNMKASSQSIDYILKGCEWKSRDTAKTGKPNFCGAMNFTRFSNLEGQTCYTFNSGIN-SDILTLNETGLNMAFKLELDLQ-------VKDSVQSLEEVGVNIVIHDQDETPL-HHAGFIVSPGFQTFVEMKVKKTENLKPPYA-TKCGSMNLKYTDD---------------YRQSQCFIEQLNNEVIHHCGCRGEFMKEPSDVPYCTMNETIHCLLPTIHHFDRKTSQSCPVDCETVQYTTALSYGRFLSSPPIGTNLVRNGSTAYINELKKTMDSSELRKYIEENIVVVQFFYQEMKEENVIQEPSYDFYKLVGDVGGQLGLMLGASVLTLVEFVD 1833
            E R   S I   +  N ++HG   +F   +  +RR +W A        F  ++ + +  + ++   T        +L FPA++LCN+N  + S++  + L   G    GL P             P  PGF  +   ++ Q    +  S+D +L  C ++       G+P  CG  NFT      G+ CYTFNSG + +++LT    G+     + LD+Q        +D+ ++  EVG+ + IH Q+E P+    G  VSPG+QTFV  + ++   L PP+      S+N  Y  +               Y    C +      V   CGCR  +M  P DVP C+  +  +C  P I    RK S +CP  C + +Y   LS             +VR  S A    L + ++ SE   YI EN++ +  F++ +  E V Q+ +Y+  +L+GD+GGQ+GL +GAS+LT++E +D
Sbjct:    9 EARRPASDI-RVFASNCSMHGLGHVFGPGSLSLRRGMWAAAVVLSVATFLYQVAERVRYYREFHHQTALDERESHRLIFPAVTLCNINPLRRSRLTPNDLHWAGSALLGLDPAEHAAFLRALGRPPAPPGFMPSPTFDMAQLYARAGHSLDDMLLDCRFR-------GQP--CGPENFTTIFTRMGK-CYTFNSGADGAELLTTTRGGMGNGLDIMLDVQQEEYLPVWRDNEETPFEVGIRVQIHSQEEPPIIDQLGLGVSPGYQTFVSCQQQQLSFLPPPWGDCSSASLNPNYEPEPSDPLGSPSPSPSPPYTLMGCRLACETRYVARKCGCRMVYM--PGDVPVCSPQQYKNCAHPAIDAMLRKDSCACPNPCASTRYAKELS-------------MVRIPSRAAARFLARKLNRSE--AYIAENVLALDIFFEALNYETVEQKKAYEMSELLGDIGGQMGLFIGASLLTILEILD 458
The following BLAST results are available for this feature:
BLAST of TCONS_00014476 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC31.043e-4928.87Acid-sensing ion channel 3 OS=Homo sapiens GN=ASIC... [more]
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