TCONS_00014477 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014477
Unique NameTCONS_00014477
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3328

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014477 ID=TCONS_00014477|Name=TCONS_00014477|organism=Clytia hemisphaerica|type=transcript|length=3328bp
ATCGATTTTGAGCTTTTGATAGAAAAGGATAATCTTCATAGGACAGGAGC
CAAACACTTTTCCCATCTGATAAAATCGCTAAGTTACATGTATTGAGAGa
ggtattttgttgttgttgaaactGTTTCGATGGATTCGTATATAGAGTGA
AATAAAAATAGATAGGAGATGACAAAGAAGGACGAAGTGATGATGTTTGG
ACGAGCCAATCGAATGAAGAATAAAGACGATGGCAGTATCATCCTACCAC
CAAACATAGTGCATGAATATGAACAACTTGCTAAAGAGCCTTCTTTACTA
AAGAATATGGACAGTACTAAAGATCAGGTTATAAACAAGTCAGAAggtga
aaataataataataagaacGCAGATCCTGATACAGCAGTTATTAagaatt
tgtctaaaaaatatgGTCTTCCGTTTTCTCTTAACCATAGCCGCCAGGAG
AATGGTGAAGTCAAGCCTTCCACACAAAGGACGAATGGTAACTTGGCATC
AGCAGCATCGATATTCAACAAGAAAGACTCTACAACTGACACTCATCCCG
CTGGCACTAATAAAACAGCCAACGGTGATACACAACGAGCAAGAGACCGG
TTTCGCCAGGCTGGCATGAAAGCGAGGCTGGCACGAAGGATGGAGAAAAT
TGCAGAAGATAGAATGACCATCAGTCAAATATTTAACAGATATGTCGATA
ATTCAACACTTCACGGATTCAGATTTATTTTCATGAAAACGTTTTACGTC
CGTCGTTTTTTATGGTTTGCATTGACGTGTGGTATGGCTTGTTTGTTTTT
CATGGAGTTGGAGAAAAGTATTGCTCTTTTCTACCAATATCCATTCACAA
CTTTATCCACTATAGAATATGTACCCCAATTGAAATTTCCAGCTATCAGT
TTATGCAATTTGAACAATTATCAAGTTTCCAAAATACGAAAAAGTAAACT
TAAAGGACTTTACGAGAAAGGTTTATTTCCATTTCACGGTGAGCCTTTTG
ACCCTGGCTTCGAGCTAACGGGTGAAGAGCTCTTACAAAATATGAAAGCA
TCATCACAGAGTATAGACTACATTTTAAAGGGATGTGAATGGAAAAGTAG
AGACACTGCCAAAACAGGCAAACCAAATTTTTGTGGTGCTATGAATTTTA
CGAGGTTCAGTAACCTTGAAGGTCAAACTTGTTATACGTTTAATTCCGGT
ATCAACTCTGACATTCTCACTTTGAACGAGACAGGACTTAATATGGCGTT
CAAACTCGAGTTAGATTTACAAGTGAAAGATTCTGTGCAAAGTTTGGAAG
AGGTAGGAGTGAACATTGTTATTCATGATCAAGACGAGACGCCTCTTCAC
CATGCAGGATTCATTGTTTCTCCTGGATTTCAAACTTTCGTCGAAATGAA
AGTCAAAAAGACGGAGAATTTGAAGCCACCGTACGCAACAAAATGTGGTT
CGATGAACTTGAAATATACAGATGACTATCGACAATCTCAATGTTTCATT
GAACAACTCAATAATGAAGTTATCCATCATTGCGGATGTAGAGGAGAGTT
CATGAAAGAGCCATCTGATGTTCCATATTGTACGATGAATGAAACTATAC
ATTGTCTACTACCAACCATTCATCATTTTGATCGGAAGACAAGCCAATCA
TGTCCGGTAGATTGTGAAACAGTTCAATACACCACTGCACTTTCCTATGG
TCGTTTTCTTTCGAGCCCCCCTATCGGTACAAACTTGGTTCGCAATGGAA
GCACCGCATACATCAACGAGCTGAAGAAGACCATGGATTCCTCAGAACTG
AGAAAATATATAGAGGAGAATATTGTGGTGGTGCAATTCTTTTACCAAGA
GATGAAGGAAGAGAATGTGATACAAGAACCAAGTTATGATTTCTATAAAC
TTGTTGGTGACGTTGGAGGACAGCTCGGTTTGATGTTGGGAGCCAGTGTT
TTGACGTTAGTGGAATTTGTTGATTTGTTTCTGTTCACATTATATCATCA
ATTATTAAGACTTtcacgaaaaaagaaaaaggagagTGAAGTGAAGGAAG
CAAACAACAACAATTCGAATGGGACAACTAAATTGATGGATACTTGAAAC
CAAACTCTTTCTTATTGAAGAGACCGAAGGTGATACGACATGGCACCAAT
CTAAGGAATTCAGTCAAAATGGATTCGAGGgttcttttgaattttcattc
aaaatatacTCTCCAATAATTGAAATATCGAGAATATCACAGAGCGTATG
AAACATCGACAAAAGANGCCAAGAATTGAAATATCGAGAATATCACAGAG
CGTATGAAACATCGacaaaagataatgaaatttGAAGTTAGCCATTCTAA
AAACAACAATATGTCATTAAAATCGGAATTTCGTAATATCTAGATACCTC
TCGCATGTCATAGATTGAGCTTTTAATGCTCTAGCGATTGACTTAATTGA
TTGActgcaaaaaaggaaaagatgTGCTTAAAGAGCAGCCAAAGTTTACT
TTACGAGTTATTTGTATAAAATAtcattgtaaatatttttatttaagaTC
TTTTACATCCTTTATCAAATgtataattaaaattttattacaaaaacaat
ttaaaaatacgatatttttgcaaaattcatTGTCTGTCATTTTTAAAGAA
GGTAAGATTTATTATTAGTATTCTGGGTGGTGAAAAGTCCGAGAAATTTT
CTACTGTACGTGTATCAGAGATTTCCGCTACATTTGTTAGTTTGTTATCT
TGTTCTCTAAATAGAAAGTACTCTGATGAAATTgcgaaaaaaaaggaaaa
ttagcTTTCGTATTCTAATTTGGATCAGTCATTGCATTACAGACATCATT
AACATTAAGGATTGCGAAATCAAAGAGAGGCGTAACGCGTTCAAGAATTA
TTAATGGAAAAGATGTTCATTAATGAAGTAGACAGAGATCGAAGGAGATA
AAACTGAACTCAATTGTTCCATTTTAAGACAACATAAGCACTCAGCCCAC
AGAAGGTTAGTATAGACAATGAAGCGACCCCTACGAGAATATAATAGGTA
TTTCTTTGTTCAGTGAAAGCTCCTGAAAGAAGGATGTCTTCAAATCTTAC
TATGTCTTTGGGAACGTATGAAGTATCCAATCGTCTGATTATCTCGTCTG
CCGCCCTCTCACCTGACTGAACCGCCCCACTGACGAAGCCACGCCACAAT
GTAGCCGTCTCCGTACCGGCAAAATGAGTTCTATGTACAAAGTGTAGGAC
aagcaaaatacaaaaaatctaAATCTTAGATTTAGTTTTCAACGAATTGG
AATTGTATGAACCATAGAAGGTTACCAA
Run BLAST on NCBI

transcript from alignment at sc0000188:90170..96287+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014477 ID=TCONS_00014477|Name=TCONS_00014477|organism=Clytia hemisphaerica|type=transcript|length=6118bp|location=Sequence derived from alignment at sc0000188:90170..96287+ (Clytia hemisphaerica)
ATCGATTTTGAGCTTTTGATAGAAAAGGATAATCTTCATAGGACAGGAGC
CAAACACTTTTCCCATCTGATAAAATCGCTAAGTTACATGTATTGAGAGa
ggtattttgttgttgttgaaactGTTTCGATGGATTCGTATATAGAGTGA
AATAAAAATAGATAGGAGATGACAAAGAAGGACGAAGTGATGATGTTTGG
ACGAGCCAATCGAATGAAGAATAAAGACGATGGCAGTATCATCCTACCAC
CAAACATAGTGCATGAATATGAACAACTTGCTAAAGAGCCTTCTTTACTA
AAGAATATGGACAGTACTAAAGATCAGGTTATAAACAAGTCAGAAggtga
aaataataataataagaacGCAGATCCTGATACAGCAGTTATTAagaatt
tgtctaaaaaatatgGTCTTCCGTTTTCTCTTAACCATAGCCGCCAGGAG
AATGGTGAAGTCAAGCCTTCCACACAAAGGACGAATGGTAACTTGGCATC
AGCAGCATCGATATTCAACAAGAAAGACTCTACAACTGACACTCATCCCG
CTGGCACTAATAAAACAGCCAACGGTGATACACAACGAGCAAGAGACCGG
TTTCGCCAGGCTGGCATGAAAGCGAGGCTGGCACGAAGGATGGAGAAAAT
TGCAGAAGATAGAATGACCATCAGTCAAATATTTAACAGATATGTCGATA
ATTCAACACTTCACGGATTCAGATTTATTTTCATGAAAACGTTTTACGTC
CGTCGTTTTTTATGGTTTGCATTGACGTGTGGTATGGCTTGTTTGTTTTT
CATGGAGTTGGAGAAAAGTATTGCTCTTTTCTACCAATATCCATTCACAA
CTTTATCCACTATAGAATATGTACCCCAATTGAAATTTCCAGCTATCAGT
TTATGCAATTTGAACAATTATCAAGTTTCCAAAATACGAAAAAGTAAACT
TAAAGGACTTTACGAGAAAGGTTTATTTCCATTTCACGGTGAGCCTTTTG
ACCCTGGCTTCGAGCTAACGGGTGAAGAGCTCTTACAAAATATGAAAGCA
TCATCACAGAGTATAGACTACATTTTAAAGGGATGTGAATGGAAAAGTAG
AGACACTGCCAAAACAGGCAAACCAAATTTTTGTGGTGCTATGAATTTTA
CGAGGTTCAGTAACCTTGAAGGTCAAACTTGTTATACGTTTAATTCCGGT
ATCAACTCTGACATTCTCACTTTGAACGAGACAGGACTTAATATGGCGTT
CAAACTCGAGTTAGATTTACAAGTGAAAGATTCTGTGCAAAGTTTGGAAG
AGGTAGGAGTGAACATTGTTATTCATGATCAAGACGAGACGCCTCTTCAC
CATGCAGGATTCATTGTTTCTCCTGGATTTCAAACTTTCGTCGAAATGAA
AGTCAAAAAGGTATTGTTTATTTATCCAATCTACTATGTTAATGATAGCT
GTCAACACAATTTATTTAATTGCAAAACGTTCAAAACCTAAGTATAAAGT
TTAGAGAAGACCGAAGCTCATAGATTTTTTATCAAGACTAAAATTTGGAT
CAGTTCAAACACCCAAAGGACttctttttaaaggttttcacAGGCGTACG
CAAAATCGTAGAGGGTGTCTACGGATAGCAAATAATTCAGAAAAATAATA
AGGCCAAAATTTGCCGTCAATATAAAAATGGTATGTAAATACGTATCAAA
GAGGACTGTTATTAAATCCGGAGAAGGGTAAGTTAGATAATTTTCAAGCA
CATGTGgggtttgaaatggttttaaaCACAGTCAAATAGAAGGTACTtag
tttcatttgtttatcattaTAGACGGAGAATTTGAAGCCACCGTACGCAA
CAAAATGTGGTTCGATGAACTTGAAATATACAGATGACTATCGACAATCT
CAATGTTTCATTGAACAACTCAATAATGAAGTTATCCATCATTGCGGATG
TAGAGGAGAGTTCATGAAAGGTATACAAATATGTCTACCCCCctccaatt
catgatatgcaccaatacaatgacttcacgaaattatgcaacttttctgt
tttcgttccacccaatacgtcactttttccattgtttaagtgacgtattc
ggtggaaaattctaaaagttttcagaagacactccagtggtgcatatcat
gaatatgttCCTTGTGGTTTGAAAAATACCGTATGACTTGACTTGAAGCT
AACGTTTgttcttttgattttcaaaagaatctACAGAAAAATTACATAAG
GTCATCTAGTTAGCTTGGGATGACAAATGATAGAGGGcatcatattttca
tattatgtAAAAACTAATAACATTCTTTACCGAGTCAAcactaaaatata
atttttgccaTCTTTATCGTCAGTTCGAACTTGACTAGACTGTGACAAAT
ATCGTATCATGATAATTATCGAATAACTTCTAGTCACCACATGCTAAATT
TATTAGAGAAAGCTTAGCTAATTAGGACAGTATACTCTGATTACGAAAGA
TATAGAGGCTAAGCTTTTTACTCAAACTAGGCTTTAAATCTCCCCCTTAA
AGTCAGAGGAAAGAGAGGTTTTCACTGatacaaaaaaaatctttaaaaaa
cccTCTCACAAATCAAGTGTTTTCTGACATTACTCTAAGGTATTATTATT
TCCACCATAGAGCCATCTGATGTTCCATATTGTACGATGAATGAAACTAT
ACATTGTCTACTACCAACCATTCGTAAGTAACAACTTCCCCTTATCACCA
ATCCATCCTTCACTGAAATTAAGAATTCCGACAAAACGGAAGATAAGTTC
AGGTTGAAAATGAAGGACTTTTTTATTATTCAGgtattcatcaattttaa
ttaatGGAAACTACTGGAGCCAATCACAGTCTTCAGTACATTTTGAACAG
CAGGCCATCCTTCTTTCCAAATTATCTTCTTCATTGATAAGAAAAAGACG
TTTTCGAAAACGAGGGGTCGTACTGTCTATTTAACAAAGTCCAGTAATTT
GGATTAATCCGTTTACCTGTTCGCAAGGCCATTACATTAAATTACTTTAA
TGCTCAGACCACCTTTTTCGGTCCCTAaacctacaatcatggtcgaaata
tattgaaattttagtttattttaacgtttttcagaatctaaagttcgggc
gagaatttctattttagcacttccactttctttcattgaatatttcgatt
ttagaggggtttggtggcttctacgctatatttcaagccttattccagca
aatttgagcttttaaatcctgagatcttaaggtcctaagtcttaagtctc
atgttaaaactcagagtttaaACTCTACTTCAAACTATAGTTTAacacgc
ttaaaaatcatttgtagtgtttaaaatttcacctGGAaatcccttttgtc
tcaaatattttgtccatgattgtaacaTGAAAAGATGAGTGTCAAGATGA
GTGTCTTCGTATATATACGATATATCGAAATAAACGATCCCTCTGTTTTG
CAGATCATTTTGATCGGAAGACAAGCCAATCATGTCCGGTAGATTGTGAA
ACAGTTCAATACACCACTGCACTTTCCTATGGTCGTTTTCTTTCGAGCCC
CCCTATCGGTACAAACTTGGTTCGCAATGGAAGCACCGCATACATCAACG
AGCTGAAGAAGACCATGGATTCCTCAGAACTGAGAAAATATATAGAGTGA
GTATGATTGGCAGACTGTCCAAAAGTTTTGTACATTTTATTAACTTTAag
attagattttgaaaaaagtacccATTTTAAAGGCGCCGAAAAGTTTACAA
AGATATTCCCACAGATTCACAAACCCATTCCATTTTCATTCTCATTCTAT
ATCACCTTAGTTTTGATTTTAAGTACCCCTTCCAAAGGCGCTTGACTTGA
AAATTTAGCAAGGATATTCCTAAGGTGTCTACGGAAATCTTTTTCATAGT
TTCAACATTTCTAAACCAAATTTAAAAGAATCTTTAAGCTCGATACTCAA
ATTGATTCTAATATTCTTGAATGATTTGAATGTTCTTTCCATAAAACGAT
TATGAGCAAAGATAGCAAAATCATATTGTTTAGGAAAAAACAGTCCAAAA
TTGCATTCAAAAGCCAAGATAAAAACACGACAAACCTATTGCGAAAATCA
cgcttttcaagatttcaaggTTCCTAAGTAAAGGTTTCTctgaaatttta
taattttcgaAGATTTCAACGTTGTGGGAGGGGGTTatgattttcaaggt
tttcaataAGAAGCTGTCTTCTAACAGGTTCACAAATCCCTTTTTTCTAC
AGGGAGAATATTGTGGTGGTGCAATTCTTTTACCAAGAGATGAAGGAAGA
GAATGTGATACAAGAACCAAGTTATGATTTCTATAAACTTGTTGGTAAGA
ATCTTCTACTACTCCCTCCTCTCTCCATTGCAAGATGGGAATAGAAAATG
GTTTAGGTGAAATTTCGTTTTTCTTAAATCATCACAACAAACTGTGAATT
ATAAATGGagataaacaaacattttaAACTTAAGACGGAGACCTGTATGA
TCATGTCTGACGACAGCTAACTGATTAGTTTATTTATCcgaaagattttg
atttttcaacatCTCCGTTCTAATCCAAATCTTGCTGACCCCTTTCTGAT
TAAATATCCccgaaaaaataaataacaaactCCTTTTGATTTATAGGTGA
CGTTGGAGGACAGCTCGGTTTGATGTTGGGAGCCAGTGTTTTGACGTTAG
TGGAATTTGTTGATTTGTTTCTGTTCACATTATATCATCAATTATTAAGA
CTTtcacgaaaaaagaaaaaggagagTGAAGTGAAGGAAGCAAACAACAA
CAATTCGAATGGGACAACTAAATTGATGGATACTTGAAACCAAACTCTTT
CTTATTGAAGAGACCGAAGGTGATACGACATGGCACCAATCTAAGGAATT
CAGTCAAAATGGATTCGAGGgttcttttgaattttcattcaaaatatacT
CTCCAATAATTGAAATATCGAGAATATCACAGAGCGTATGAAACATCGAC
AAAAGANGCCAAGAATTGAAATATCGAGAATATCACAGAGCGTATGAAAC
ATCGacaaaagataatgaaatttGAAGTTAGCCATTCTAAAAACAACAAT
ATGTCATTAAAATCGGAATTTCGTAATATCTAGATACCTCTCGCATGTCA
TAGATTGAGCTTTTAATGCTCTAGCGATTGACTTAATTGATTGActgcaa
aaaaggaaaagatgTGCTTAAAGAGCAGCCAAAGTTTACTTTACGAGTTA
TTTGTATAAAATAtcattgtaaatatttttatttaagaTCTTTTACATCC
TTTATCAAATgtataattaaaattttattacaaaaacaatttaaaaatac
gatatttttgcaaaattcatTGTCTGTCATTTTTAAAGAAGGTAAGATTT
ATTATTAGTATTCTGGGTGGTGAAAAGTCCGAGAAATTTTCTACTGTACG
TGTATCAGAGATTTCCGCTACATTTGTTAGTTTGTTATCTTGTTCTCTAA
ATAGAAAGTACTCTGATGAAATTgcgaaaaaaaaggaaaattagcTTTCG
TATTCTAATTTGGATCAGTCATTGCATTACAGACATCATTAACATTAAGG
ATTGCGAAATCAAAGAGAGGCGTAACGCGTTCAAGAATTATTAATGGAAA
AGATGTTCATTAATGAAGTAGACAGAGATCGAAGGAGATAAAACTGAACT
CAATTGTTCCATTTTAAGACAACATAAGCACTCAGCCCACAGAAGGTTAG
TATAGACAATGAAGCGACCCCTACGAGAATATAATAGGTATTTCTTTGTT
CAGTGAAAGCTCCTGAAAGAAGGATGTCTTCAAATCTTACTATGTCTTTG
GGAACGTATGAAGTATCCAATCGTCTGATTATCTCGTCTGCCGCCCTCTC
ACCTGACTGAACCGCCCCACTGACGAAGCCACGCCACAATGTAGCCGTCT
CCGTACCGGCAAAATGAGTTCTATGTACAAAGTGTAGGACaagcaaaata
caaaaaatctaAATCTTAGATTTAGTTTTCAACGAATTGGAATTGTATGA
ACCATAGAAGGTTACCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008099XLOC_008099Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014477-exon-sc0000188-1491911889:90170..91579TCONS_00014477-exon-sc0000188-1491911889:90170..91579Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1510915933:90170..91579TCONS_00014477-exon-sc0000188-1510915933:90170..91579Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1575043694:90170..91579TCONS_00014477-exon-sc0000188-1575043694:90170..91579Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1491911889:91992..92139TCONS_00014477-exon-sc0000188-1491911889:91992..92139Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1510915933:91992..92139TCONS_00014477-exon-sc0000188-1510915933:91992..92139Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1575043694:91992..92139TCONS_00014477-exon-sc0000188-1575043694:91992..92139Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1491911889:92830..92892TCONS_00014477-exon-sc0000188-1491911889:92830..92892Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1510915933:92830..92892TCONS_00014477-exon-sc0000188-1510915933:92830..92892Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1575043694:92830..92892TCONS_00014477-exon-sc0000188-1575043694:92830..92892Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1491911889:93673..93865TCONS_00014477-exon-sc0000188-1491911889:93673..93865Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1510915933:93673..93865TCONS_00014477-exon-sc0000188-1510915933:93673..93865Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1575043694:93673..93865TCONS_00014477-exon-sc0000188-1575043694:93673..93865Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1491911889:94472..94563TCONS_00014477-exon-sc0000188-1491911889:94472..94563Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1510915933:94472..94563TCONS_00014477-exon-sc0000188-1510915933:94472..94563Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1575043694:94472..94563TCONS_00014477-exon-sc0000188-1575043694:94472..94563Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1491911889:94866..96287TCONS_00014477-exon-sc0000188-1491911889:94866..96287Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1510915933:94866..96287TCONS_00014477-exon-sc0000188-1510915933:94866..96287Clytia hemisphaericaexon
TCONS_00014477-exon-sc0000188-1575043694:94866..96287TCONS_00014477-exon-sc0000188-1575043694:94866..96287Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000188supercontigsc0000188:90170..96287 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0523538	0.092884	0.156077	0.315776	0.824092	0.415306	0.408775	0.230272	0.332873	0.257692	4.52875	4.26287	0.369274	0.190095	2.15171	1.33012	6.93968	6.56778	2.42412	2.25354	1.59776	2.72838	2.37963	2.35099	1.67065	1.37672	0.149401	0.217658
Blast
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BLAST of TCONS_00014477 vs. Swiss-Prot (Human)
Match: ASIC3 (Acid-sensing ion channel 3 OS=Homo sapiens GN=ASIC3 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.917e-49
Identity = 138/478 (28.87%), Postives = 222/478 (46.44%), Query Frame = 1 
Query:  655 EDRMTISQIFNRYVDNSTLHGFRFIFMK-TFYVRRFLWFALTCGMACLFFMELEKSIALFYQYPFTTLSTIEYVPQLKFPAISLCNLNNYQVSKIRKSKL--KGLYEKGLFP---------FHGEPFDPGFELTGE-ELLQNMKASSQSIDYILKGCEWKSRDTAKTGKPNFCGAMNFTRFSNLEGQTCYTFNSGIN-SDILTLNETGLNMAFKLELDLQ-------VKDSVQSLEEVGVNIVIHDQDETPL-HHAGFIVSPGFQTFVEMKVKKTENLKPPYA-TKCGSMNLKYTDD---------------YRQSQCFIEQLNNEVIHHCGCRGEFMKEPSDVPYCTMNETIHCLLPTIHHFDRKTSQSCPVDCETVQYTTALSYGRFLSSPPIGTNLVRNGSTAYINELKKTMDSSELRKYIEENIVVVQFFYQEMKEENVIQEPSYDFYKLVGDVGGQLGLMLGASVLTLVEFVD 1974
            E R   S I   +  N ++HG   +F   +  +RR +W A        F  ++ + +  + ++   T        +L FPA++LCN+N  + S++  + L   G    GL P             P  PGF  +   ++ Q    +  S+D +L  C ++       G+P  CG  NFT      G+ CYTFNSG + +++LT    G+     + LD+Q        +D+ ++  EVG+ + IH Q+E P+    G  VSPG+QTFV  + ++   L PP+      S+N  Y  +               Y    C +      V   CGCR  +M  P DVP C+  +  +C  P I    RK S +CP  C + +Y   LS             +VR  S A    L + ++ SE   YI EN++ +  F++ +  E V Q+ +Y+  +L+GD+GGQ+GL +GAS+LT++E +D
Sbjct:    9 EARRPASDI-RVFASNCSMHGLGHVFGPGSLSLRRGMWAAAVVLSVATFLYQVAERVRYYREFHHQTALDERESHRLIFPAVTLCNINPLRRSRLTPNDLHWAGSALLGLDPAEHAAFLRALGRPPAPPGFMPSPTFDMAQLYARAGHSLDDMLLDCRFR-------GQP--CGPENFTTIFTRMGK-CYTFNSGADGAELLTTTRGGMGNGLDIMLDVQQEEYLPVWRDNEETPFEVGIRVQIHSQEEPPIIDQLGLGVSPGYQTFVSCQQQQLSFLPPPWGDCSSASLNPNYEPEPSDPLGSPSPSPSPPYTLMGCRLACETRYVARKCGCRMVYM--PGDVPVCSPQQYKNCAHPAIDAMLRKDSCACPNPCASTRYAKELS-------------MVRIPSRAAARFLARKLNRSE--AYIAENVLALDIFFEALNYETVEQKKAYEMSELLGDIGGQMGLFIGASLLTILEILD 458
The following BLAST results are available for this feature:
BLAST of TCONS_00014477 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC31.917e-4928.87Acid-sensing ion channel 3 OS=Homo sapiens GN=ASIC... [more]
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