TCONS_00014591 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00014591
Unique Name	TCONS_00014591
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	769

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000190:135923..146961-
coding sequence from alignment at sc0000190:135923..146961-

transcript sequence

>TCONS_00014591 ID=TCONS_00014591|Name=TCONS_00014591|organism=Clytia hemisphaerica|type=transcript|length=769bp
CAGAAATCGGGGTTAATATTTTCCCGAAATTCCCGAAAATAGCCCGAATT
CTCGGATCCAGACTCCCAAAACATGAAGACAGAAAATCCACACGCTAGAG
TTCTTTTCCAATAGGGCTGCCAACCAAGGAGATAAGAACGTGTACTCCTT
CCACTTTAATACtttcaaaatgaagaagaacCCAGCCGTTTCCTCATCCA
GACGAAAGTCGAGAAAGGCTCATTTCGCTGCTCCCAGTAGTGTTCGAAGG
AAGCTCATGAGCGCACCATTATCAAAAGAATTGAGGCAAAAATACTCTGT
TCGATCTATGCCAGTACGAAAGGACGATGAAGTAGTTGTTACTCGAGGAC
CATTTAAAAGTGCCCAAGCTGGTAAAGTCACCAGTGTATACAGAAAGAAA
TGGGTTTTACACATCGAGAGAATCCAGCGTGAGAAAGTTAATGGTGCTGC
TGTTAATGTTGGAATTCATGCCAGCAAAGTTGAAATTGTTCGATTAAAGA
TGGACAAAGACAGAAAGAAGATCCTTGACCGAAAGAACAAAACTAAATTG
CAAGAACGAGCCAAGGGAAAACACACCGAAGAAGATGTTGCTATGTCAAC
AGAATAAAATGgTCTTGCTGGTTGGTGCCTTCAACATTAATTTGTATTGT
CGATGTTAATTTACAAAGgaaatacaaaacaaaaaatatcgaaaaattat
tttccctaTTTTCCTCAAAGACCCTTCTTCATCCTCTGTATCTTCAGGTT
TTTGTTGTAAAAATCCAAT

Run BLAST on NCBI

protein sequence of TCONS_00014591-protein

>TCONS_00014591-protein ID=TCONS_00014591-protein|Name=TCONS_00014591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=145bp
MKKNPAVSSSRRKSRKAHFAAPSSVRRKLMSAPLSKELRQKYSVRSMPVR
KDDEVVVTRGPFKSAQAGKVTSVYRKKWVLHIERIQREKVNGAAVNVGIH
ASKVEIVRLKMDKDRKKILDRKNKTKLQERAKGKHTEEDVAMSTE

Run BLAST on NCBI

transcript from alignment at sc0000190:135923..146961-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00014591 ID=TCONS_00014591|Name=TCONS_00014591|organism=Clytia hemisphaerica|type=transcript|length=11039bp|location=Sequence derived from alignment at sc0000190:135923..146961- (Clytia hemisphaerica)
CAGAAATCGGGGTTAATATTTTCCCGAAATTCCCGAAAATAGCCCGAATT
CTCGGATCCAGACTCCCAAAACATGAAGACAGAAAATCCACACGCTAGAG
TTCTTTTCCAATAGGGCTGCCAACCAAGGAGATAAGAACGTGTACTCCTT
CCACTTTAATACTTTCAAAATGAAGAAGAACCCAGCCGTTTCCTCATCCA
GACGAAAGTCGAGAAAGGCTCATTTCGCTGCTCCCAGTAGTGTTCGAAGG
AAGCTCATGAGCGCACCATTATCAAAAGAATTGAGGCAAAAATACTCTGT
TCGATCTATGCCAGTACGAAAGGACGATGAAGTAGTTGTTACTCGAGGAC
CATTTAAAAGTGCCCAAGCTGGTAAAGTCACCAGTGTATACAGAAAGAAA
TGGGTTTTACACATCGAGAGAATCCAGCGTGAGAAAGTTAATGGTGCTGC
TGTTAATGTTGGAATTCATGCCAGCAAAGTTAGTATAATTTTGTTGTTTT
TTGTTTGAATTCAAATTTGGTTAATTATTGATCCTGGTTAACTTGTTATT
ATAATATATGGTAGTATTTAGCTTGAATTTCAGTATGTCATACTCATTAA
TACACCGTTTAGGAGTGTCGACTGCGCACGCGTCAATCCAATTTTCCATT
GTTTTGATTTTAGTGACCATGGAAAATTCACTCTACTCCGTAAAAAACGG
TAGGTAAACATCTGGTTCTCATAAGGAAACATAGCAGAAAAACGGTAGGT
AAAGAACTCCTTTTAATCATAACTTCTTTTCCTCTTGATGAATTTTTGTG
AAATTTTCAGGAGAGACTTATAAAATTATCATTGATATCATGTTCAAATA
TCCAAATCATTCTCTTTAAAGGAGACAAAAAAATTCACAATGTTTACATT
CCTCTAACCTTTCACAGTACTAAAGTGCGCATTTTCACCTACCATTTTTA
CTGGCCTCTACAATGGAGTACCGCGAAGATAGCGAGACTCCTAAACGGTG
TATTGGTGATATTATCAGCATAAATTATACGTTTCTGTCATGCACTTTCA
TTTCATTTGTGTTTAACAGTTTGCCAGTATTGAAGATAAAAGCAGCATTA
GTTTTTGGCAATACTGTTTGGCAGTCCAGCTATCTCCAAGGTGCTCCACT
GCTTAATATTTGTTTTTAAGTACAGGTTACACTGGGACATTTTCTGTCTG
CAAAGTGGATGTTGTTTATAGAAAAATCAAAGCATTCAGTTAAAAAAGAA
CCGCAGAGATAGTTGTTATCATTTGAAAAGGAGGTAAAATTTTTCCGACT
CAAAGTAATTTTTCTCAAAAATTGAGAGTCGGTCGGAGGACACGAACCAA
ACTATCAATTGGGCTTGACTGTATTCCATTTTTAAACCATACAGGGGTAT
TGACAAACTTTTCCAGGGGGTCTCAGCCTTGATTTTCCAATGGGTTTTTG
TTCATTTTTCAGATTTTCCAAGGGTGCTATTAGAGGTTCCCAGGGGGTTA
TCTCCTCCTAAACTGACATCAATAGTCATTTTCCAGGCCCTTTTTCTCAA
AATTTCACTCTCCAGGGGGTGTTGAGCCCTAATTTTCTAGGGGATAGTTT
GTTATCCAAATTTTCCAGGGTTAGTAAAGAAAGTTCGTCAATACCTATGT
ACAATTTTCTTTTGGAATAGCCCAATGTAAACAAATTTTATTTTCCTTTA
ACAAGAATGATTTAGATATTTGAACATAATATCAATTATAATTACAAGAC
GGTGTCAATCGAACGAATCGAACGCTGAATCAATCGAACGCAATTGAACG
CAATCGCATAATTGCAATTCGATTGTCGAACGCAATCGAATCGCAATTGA
ATATTACCCAGGATTTGCTTTTCGATTGCTTCGATTACGTTCGATTGTAT
TCAATTACGTTCAATTGTATTCGATTAACTTCGATTGATTCAATTGTATT
AGATTTTATTCGCTTTGGTATGGTACTTCAAGCACTCGGCCGTCCACGCT
AAAAAGCTCTAACAGAGTGATTCAATTTAATTTAATCGCAATCAAACTCG
AGCATAATCGTAATCAAACGAAATCGAAGATTAATCCAATGTAATTGACA
ATCAATCGAGCCAATCAAACATAGGTTAGATTGGTTCGATTGATAGTTGA
CTATCTATTCGATCACTATTTCTATTATTTCTATTTCTATTATGGTTGAG
TTACAGGAGGCTCTGGGAGCCCATTCTCGCAACTATAGATGTTTGAGTAA
GCATCCCGTCAGCACCTTGAACTGACTACCCAATTCCCCTCACATGGCAT
GGGTTGACCCGGGCGAAGGTTTGTTCACTTGCCAAGTGAACCGTTGTGAG
TGGGAATCGAACCTTGGTCGCCTGTACAGGAATCAAGGTTGATGTCCACT
ATACCACAACGCCACTAGTAGGGGGCGTTTTTTTGAGGTCGCTCGATTTT
TTTAGTCAAAGCACTTGTTATACTTTTTTGAAAAGCTTAGGGGTAGGGGA
ATCAAAATAACTTGGGTGCCAATTTTTTTTCGGACACTTTGGTTTGATTT
TCGGACAAATACGACGGTCTCAAGCTAAAATCATAGGGTGAAAAATTAAT
GAAAATTTTAGCTTGAGAACACGGTGAGACCTGTTATATATTTTTGGAAA
GCTCTCAAAAAATTAAGATTAGTGATATATTGCGAGTATAGGTGATTTCT
TTACCTAACTCGAGATATTAATCCTTAAAAACAGTGTTTTTCAGCCAGAA
ACTGCTGTTTTGTTTGATATCTCAAGTTATGTACTGAAATCACCTATACT
TGCAATATATCATTCATCTTAATTTTTTGAGAGCTTTCCAAAAATATACA
ACAGGTCTCCGTTTTCTCATGCTAAAATTTTCATTAATTTTTCACCCTAT
GATTTTTGAATTTTTGCTTTCCAAAAATGTATAACAAGTGTTTTGACTAA
AAAATTCAAGCGATTTTGTTCGAAGTAATTCGATTGACATCGTCTGGTAA
TTATAAGAATTAAGGAAAAGAAGTAATGATTAAAAGGAGTTCTTTACCTA
ACGTTTCTCTGCTGGGTTTCCTTATCAGAACCTGGTTTTTACCTACAGTT
TTTTTACGGGGGAGTAAAGTTTCCTGTGGTCGCTAAAATCAAAACAATGG
AAAATTGTTCGGATGTGTACGTAGTCGACACTACTAAATGGTGTATTAAA
TTATTGCCGAAAACAATAATTTTTTCAATGATAAAATACTGAGTGAACCA
AAATTTCGGAAATGTGGAAAAAGATGCTGCATTGGTTCTGTATGACTTGA
TTTATCTAGTCTGCATTTCCAACAAAAACCAGCTGAAAACAAAACTAAGC
AAGGCACTAATTGTGAGGGTGTCAAAAACCATGTGTTTAATAATAAAATC
AATTTTCCTTCCAAAAACAGCCTTAGTTGCCAAAAGTGGCAATCTTTATT
TATTTACTTTTTTGCTTTTCTGCTGATTCAGCATTTTATCGCTGAAGTAA
ATGCCGTTTTGGGCAATAATTTCTGAAAAGAGCAAAAATTGCTGTTTTAT
CTTAAACACTCAACAGTTTAAAAAACTGACTCTTACTTTTTCGTGATACT
TTGTTTTTGATTTTGTACTTTATGATACTCAAACAATTCGTGGAATCCAA
TCATTGACCACACACTGTTGGAATCGGCTCTCCTGAAGTTGACTCACTTT
TTCAAAATTTGATGAAGGCATACATTTTTCTTCTACACTAAGGCCACTGT
CACAAATTGTTTTTAGGTAAAATGCAAGTTGGTCGGTCAGATTGTCATTA
AAAAAAGTCGAAATTAAAAATAAACAGCCCTCTGTTTTGTTGTGTGTTTA
TGTTGCTGGACCGTCAATGTTCTTGAGTTTGAATTTCACGACAAGGTCCC
CTTTTTTAAAATGTGATACTTTAATAGAATAAACTGTCGCGGCTGGTCGT
GGGGATTAAATTTCGCAGATTTTGGTGTCATCCGTGAAAATCTGCAAGAT
TAAGTCCCAATGGAAATTTGGAACGGCCTCATTTGCGAGATATTTCTTAA
CAAAACTCAAAATATGTCAAATAAATACTATTTCAATGGTTACTTGCATC
AAAGGAGCACAAATAATGCGTATTTCAACAACTAACATGCATGATTTGGT
AGTAAAAGTCACAAAATCGTGAAAATATTGCCACCCAATAGTTCCACCCG
CAAAATTTTTAAATTTCACGGATAGGTCCAACTGCTAAATTTAATCCCAG
GAAAGTTTATCCCATTAAAGTATCTCTGTTTTATGACTAGAGAGATCATA
ACACATTCCTGTAAATGTATAAGAAAGGAGATTATCTCTATTATACTTGG
ATGAATTCTGTAACACAGGTTTTATTTATATACTTACTTTTTTTGATACT
TTTTGATATTCACTGAAGTGTAATTAGTTATGCACTAGACCATTGCATTT
GCCCAAAGGAATATTCGATAAAAATCCAATAATTTTGAAACTTCTGACTC
AAAACAATTGGAAAAACAATTGGAAAATTAAGAAAAACTATCAATTGGTT
GGACGGACATAAACACAAGTTCATTCATTTCTGATGGCTCCCTATTTTAT
TTGACATTATCTTCTAAATGTTAAATAGGCCTTAAAAGGAATGGTCTACA
TTTTTGATGAAATAAGTAAATAATTTGCACTGCTTTTGCAATAGCAGCAA
TCAGTGTTGTCCATTTTTTAGATTGACTTTAAAGCTTGGCATTCACATAT
TAAAAAAATAATAGCGTCAGACACACATGATAACTAAGAAAAATTTATCC
TAATGAGTAGACTCATTAATCACATGTGTGCATGTTGTTAAATGCCCATT
CTTAACGCTTGGCGCAGGTACTCGCCTGCAGGGACTTTTTCCCTGCAATG
TAGGTTCAGCCTGATTGGCCAGCTTTTGGTGTATTACTTACTTAGCAGTA
CTTTCGGGTGCATTTTGATAATTTCGATGCGCGCACATAATTTATGGAAA
AAGCTGACTCTGCAGAAAAAGGAAAACAAATGAAAATGAAAACATAGAAG
CTGTTGGCTGGAAGTCTAAATACATGTGGCTGATGTTTTGATGTGGTTTT
TAGTAGTTTTGAAAGTCTTTAGAGCTTGTGAAAGAGTAGGCTTCGTCATC
TTCCTTCGTTTCGAGCGTAAAACTCCTACTCTTCGGGCTATGAGCACTGC
TCTTGTTTTGAATATTGAAATTCTCCAGATAAATCGCATGCGCACTGAGG
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTAATAAGCAATTCCCGGTGGGGGTCACTAGTGGCCGCCTATAGCAGT
GCCTATAGACCAAGAGTAAGGCCTAAAAGCCTGGATCTGTCTATTGTGTA
GACTAGTGAAAGAGTTTTTATGGTAAGTTGATTATGTGTGTTTGCCTGGG
TTTCCAAAGTTCAGCAAGTCTGTCAACAAGGGTTCACACACAGACGTCAG
ACTAATCTACCTGCACCAAGCTCTATAATCTTAGAACTTTGTGAGGTGAG
GTATTTTTTGTTTTTAAGATTATGAGCTTGGATTCCGAGGCTAAAATACA
ACACAATGTAAACAGGATGAAATCGTCTTTTGTGATTTTTGGCTTATACT
TTTTACTTTTGATATTGATTTTTCATAAAAAAATATGTATGAAAAGAATA
CTTTAATGGGATAAACTTTTGTGGGGATTAAATTTCGCGGGGATTTAATT
TCGCGGGTGGCACTATTGGGTGGCAATATTTTCACGATTTTGTGACTTTT
ACTGTCGAATCATGCATTTTGGTTGCTGAAATACACATTATGAGCGCTTC
TTTGATGCCAGTAAACATTCAAATAGTCTTTGTTTGACATATTTTGAGTT
TTTTTAGAAATATTTCGCGGATGAGGCCCTTTCAAAACTGTTTTTTGGCA
TTTTCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTCTGATATTAATT
TTGTTCAAAACATGGCCGAGTTTGATTTTTGAGGAAATTTTTTTTCCGGC
CGAAAATGCCGTAAATATGCCAGAAATCGCCGTTTTTCACGATTTTCATT
GGACTTTTTCCTTACAATTGGTTGTTTTTTTCATTCAAAAACATTATTAA
TAGCAATGCCCACCATCAAGCATGTTTCAATTTTCAATAAAATTGATTTT
TGAAGCCAGAATTATTTAAAAATCGCTGGAACAACCTATTTGTGCCAGAA
AGACAGTATTTCTTGAATTTCTTGAGCTGTACTTTATATTTTTTTATGAA
ATTTTGCACACTGATGCAATATGACAATACCTAAAATGCGTCAGAGCCCG
ATTTTAGAAAAACATTTTTTCCGGCCGAAAATGCTGGAAATATGCTGGAA
AAACCAGTTTTTTTACATTTTCTCGAATTTTCATCACAAGTTTTTTCTGA
TTTTTTGCAGAAAGATGCGTATTCGCAATGCTTTTTGAGAATTTTTTTTT
CGGTTGAAAATGCCGGAAATCGCCCTTTTTGCAGATTTTCATTAGATTTT
TCCTTGTATTTCTATGTTTTTCACACAAAAACATTATTGATAACAATGCT
CACCATCAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGA
ACTTTCTATTTATTTTTTCCCTACAACCCTTCCCTCTACCCCCATCAACA
ATCAATGATGAATTTATTGTGTTATGCATTTTCGCTAAACGCTATATTTT
TTGACTGATTTTTTTCTCCTCGTATTGCTATCCAACTTTCATCATCAGGT
AGGTCCATTCAGCATCTAGCTTGTTTAGATTGACTTTAAAGCTTTGCATT
CACATATTTAAAAAAACAATAGCGTCAAACACACATGATAACTAAGAAAA
ATTTATCCTAATGAGTACACTCATTAATCACATGTGTGCATGTTAAATGC
CCATTCTAAGTGAAAAAATTAAACATTTTGATACATGCTTAAATACAACA
CAATGTAAACAGGATGAAATCTTCTTTTGTGATTTTTGGTTTTTACTTTT
TACTTTTGATATTGATTTTTCATAAAAAATATGTATGAAAAGAATAATTA
GAAGCTTCATTTTCACCTCATTCACAAGAGGTCATTGTCAGAGTAAAATA
TAATTTAAGTTAAAACGTTTTGAAAACATTTACCAAGGCTGAGCAAAGAA
AATATTTCTTTCTGGGAAATTTCTTTTTTATATCCCAGTTATGTCTTTTC
AAACTTTTTATTCTTTCCATTTTTTTCTAATTTTAACAGTTTCTACATTC
AAGTGATCTAAGACAATCTTTTGACAGTCTTTATTCCATGCTACGTGTGT
TTCAATCCTGATTTCGCAGGTTTTGCTTTAGATTTAAATTGGAATTCTGG
AAGTTTGTGCTATGATGGAGAACATCTGTACCAATTTTTATGACCACAGC
TTTTCTAGATAAAAAATAATCAAGGGTTGTAGACTCTTCCCCGTGGCCTG
TGGGGCTACAAAAGCTTGTGGTTAATAGAGTTTTGATTTCAAAAATATCT
TAGACTTCGTTTTTCAAAACTGATTTTTTAGGAAGTAACAAAATAACAAT
TAATCAATACTTTCTATCCTAATCAGGTTGAAATTGTTCGATTAAAGATG
GACAAAGACAGAAAGAAGATCCTTGACCGAAAGAACAAAACTAAATTGCA
AGAACGAGCCAAGGGAAAACACACCGAAGAAGATGTTGCTATGTCAACAG
AATAAAATGGTATGAAACTTTTTCTTTTGCTGTGGATTCTGTTTTTCTTG
TGCACAAATTAATTTTTTAAAGCTAAAACAATATATTACCAGACCAGGGT
TTTTTATAATGACTATGACATCACATGGGAACCAATAAATAATCAAAAAT
ATTCTTACTACTTGTTTTCGTGATCTTAAAAAGTAATTTAAAAAAATTAA
GAGGGATTAAGGATTCCATAACATATCTTAACATATCTGCAACTTAATAT
TGTATAATCAGTGTTGCAACTTTTCCGTCTGTAGACGGATATCCGTCCAG
TTGAGATACAAATATATCATTTCTGTCTTGCCAGTAAGAGGGTTTTTGGT
TCAAATGACCATCTAATCCTAAGGTTTCCGTCCATATTCACAAAACCTAG
TTGCAACACTGTATAATTCAGTATAATTAGAAATGTTTTCAATGTTTTAC
AATAAACCAAATTTATTAAAAGAATGTTCTTCTTTTTTTTTTTTGATGAC
CATCTAATTCTTTTTTTGAATGTTTTGATGTTGATTCATCTATAAAGAAG
GAAAGAAAAAGATAGAGAAAAACAAAAAGTCAAAGAAAAAGAAACATAAA
TGGAGAAAAAGTTTATTGAAATCACACTTTTACTTGTACAATATTGGATA
TCTTTCTCGTTCAGAGTATTCGTAATAAAGTCTGTCGCAAAATAATTTGC
AGCAGAGACAAAAAAAGACTACAACTTTTGATAAAATTTGAATTAGTTTT
GTGCTTGTTGTAAAGACAAACAGGACTGGCATATTATCAAAAAGAAAAAT
TTCCAAAAAAATCGAAAAATGATGATTGAAAATGAAGAAGAAGAAATTCG
ACTTCAATAATTGTGCTACAATCATCATTTTCACACGAGTGATTCTTTTA
TTATCATTGTGAAAAAATTTTTCAAAAAAACTTTTCAATGGAAAGATATA
GCCGAAAGAAAAACAACAAAAACAACAAAACGAGAGCCCTTTTTTAAGTC
AACCAGGGCAAAGTTTTAGGCTGTATTTTTTGACTGAATAAATATTTTTT
AAATTTTTTTTCTCGCATTTATGACGTTCTAAGATTGAAGAATTTCTGAT
ATAAAATTGAGATCATAGCATTATTCTATAAGAAGAGATCTTATGATGGT
TTCATGAACATTGATCGGGCTCAAATAAATCTTTGGTTTAAGAAAGCTTT
TAGAAGTGACCCTAAAAACGCCAGCATTTTGAAATTTCTGGTATTTTGGT
ACAGACCAGAATGTAAACTTGACTGAAATCATGTATTGACTTGAGTGACT
CATTCGACTTGACTGAAATTTATATTGTGGATTTCAATACTGTTTATATT
GAGCATGGAGGTATAAAGAAACAGGAGAAGTATGCTATTGTAACCATGCT
CGCCCTACGATTAAAAATATTACGAGGTATGCATGCTCATAATCTCATAT
ATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGCGAGCCTAGAATTTCTTTTGATTTATTACA
TAAAAGAAATCAAAAGACTTTAACGACCAATTACCGACAAATTCATCTCC
TGTCTTTCTTTATACCTCTATGTATTGAGGGAGTTCAATATAGTCAAGGG
AAAGTTAGCATCAACTGTGCGTTTTCGGCTAGAAAGCATGAAATTTGGTA
AAGTGGTACCTTAGGGGTATGATGATTTTTAGAATCGATGTGAAAAGACC
TTTCCAACTGTAGATGATATGACATGTTTTGAAAAATACAAAAATTATTT
TGGGCAAGCAGGCTGGTCTGTAAATTACTTCCTTAGCCCAAAACTTGGAC
CTAATCCGTTTTCAGATAAATTTTGTGATGTTTTTTAGAATCAGTGTGAG
AAAACCTTTCCAACGGTATATCATGCATATGACATATTTTCATTACAAAA
CTTCATGCTTTCTAGCCGAAAATGCACAATAGACCTTTTTATAAATTACG
TCACAAACATCACTTGCCACGATTTGAAATTATTGACATGGTGATAATGG
TGATTATTGCACCCTTCTTTTGCACACTTTCCCAGGACTAATTATGTTTT
TAACCAATCAAAATTATTTTCTCTTTTTCAGGTCTTGCTGGTTGGTGCCT
TCAACATTAATTTGTATTGTCGATGTTAATTTACAAAGGAAATACAAAAC
AAAAAATATCGAAAAATTATTTTCCCTATTTTCCTCAAAGACCCTTCTTC
ATCCTCTGTATCTTCAGGTTTTTGTTGTAAAAATCCAAT

Coding sequence (CDS) from alignment at sc0000190:135923..146961-

>TCONS_00014591 ID=TCONS_00014591|Name=TCONS_00014591|organism=Clytia hemisphaerica|type=CDS|length=876bp|location=Sequence derived from alignment at sc0000190:135923..146961- (Clytia hemisphaerica)
GTTGAAATTGTTCGATTAAAGATGGACAAAGACAGAAAGAAGATCCTTGA
CCGAAAGAACAAAACTAAATTGCAAGAACGAGCCAAGGGAAAACACACCG
AAGAAGATGTTGCTATGTCAACAGAATAAATGAAGAAGAACCCAGCCGTT
TCCTCATCCAGACGAAAGTCGAGAAAGGCTCATTTCGCTGCTCCCAGTAG
TGTTCGAAGGAAGCTCATGAGCGCACCATTATCAAAAGAATTGAGGCAAA
AATACTCTGTTCGATCTATGCCAGTACGAAAGGACGATGAAGTAGTTGTT
ACTCGAGGACCATTTAAAAGTGCCCAAGCTGGTAAAGTCACCAGTGTATA
CAGAAAGAAATGGGTTTTACACATCGAGAGAATCCAGCGTGAGAAAGTTA
ATGGTGCTGCTGTTAATGTTGGAATTCATGCCAGCAAAGTTGAAATTGTT
CGATTAAAGATGGACAAAGACAGAAAGAAGATCCTTGACCGAAAGAACAA
AACTAAATTGCAAGAACGAGCCAAGGGAAAACACACCGAAGAAGATGTTG
CTATGTCAACAGAATAAATGAAGAAGAACCCAGCCGTTTCCTCATCCAGA
CGAAAGTCGAGAAAGGCTCATTTCGCTGCTCCCAGTAGTGTTCGAAGGAA
GCTCATGAGCGCACCATTATCAAAAGAATTGAGGCAAAAATACTCTGTTC
GATCTATGCCAGTACGAAAGGACGATGAAGTAGTTGTTACTCGAGGACCA
TTTAAAAGTGCCCAAGCTGGTAAAGTCACCAGTGTATACAGAAAGAAATG
GGTTTTACACATCGAGAGAATCCAGCGTGAGAAAGTTAATGGTGCTGCTG
TTAATGTTGGAATTCATGCCAGCAAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008165	XLOC_008165	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00014591-protein	TCONS_00014591-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00014591-exon-sc0000190-1575043694:146484..146961	TCONS_00014591-exon-sc0000190-1575043694:146484..146961	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1575043694:138753..138885	TCONS_00014591-exon-sc0000190-1575043694:138753..138885	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1575043694:135923..136080	TCONS_00014591-exon-sc0000190-1575043694:135923..136080	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1510915933:146484..146961	TCONS_00014591-exon-sc0000190-1510915933:146484..146961	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1510915933:138753..138885	TCONS_00014591-exon-sc0000190-1510915933:138753..138885	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1510915933:135923..136080	TCONS_00014591-exon-sc0000190-1510915933:135923..136080	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1491911889:146484..146961	TCONS_00014591-exon-sc0000190-1491911889:146484..146961	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1491911889:138753..138885	TCONS_00014591-exon-sc0000190-1491911889:138753..138885	Clytia hemisphaerica	exon
TCONS_00014591-exon-sc0000190-1491911889:135923..136080	TCONS_00014591-exon-sc0000190-1491911889:135923..136080	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000190	supercontig	sc0000190:135923..146961 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1568.43	1603.98	1643.3	1677.75	1352.01	1102.2	1550.25	1615.27	2665.53	2307.2	2655.15	3292.52	3423.7	3422.17	3504.15	3362.32	3723.58	3791.1	1711.46	1923.76	3056.36	2990.21	2230.39	2137.31	2047.32	2125.31	2717.98	2592.63	1798.57	1804.3

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR005756	Ribosomal_L26/L24P_euk/arc
IPR005824	KOW
IPR014722	Rib_L2_dom2
IPR008991	Translation_prot_SH3-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Blast

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BLAST of TCONS_00014591 vs. Swiss-Prot (Human)
Match: RL26 (60S ribosomal protein L26 OS=Homo sapiens GN=RPL26 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.061e-54
Identity = 93/145 (64.14%), Postives = 113/145 (77.93%), Query Frame = 2

Query:  170 MKKNPAVXXXXXXXXXAHFAAPSSVRRKLMSAPLSKELRQKYSVRSMPVRKDDEVVVTRGPFKSAQAGKVTSVYRKKWVLHIERIQREKVNGAAVNVGIHASKVEIVRLKMDKDRKKILDRKNKTKLQERAKGKHTEEDVAMSTE 604
            MK NP V+S R K+RK HF APS +RRK+MS+PLSKELRQKY+VRSMP+RKDDEV V RG +K  Q GKV  VYRKK+V++IER+QREK NG  V+VGIH SKV I RLK+DKDRKKIL+RK K++   + KGK+ EE +    E
Sbjct:    1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEKMQE 145

The following BLAST results are available for this feature:

BLAST of TCONS_00014591 vs. Swiss-Prot (Human)

BLAST of TCONS_00014591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RL26	2.061e-54	64.14	60S ribosomal protein L26 OS=Homo sapiens GN=RPL26...	[more]

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TCONS_00014591 (transcript) - C. hemisphaerica