TCONS_00014605 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014605
Unique NameTCONS_00014605
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length216

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014605 ID=TCONS_00014605|Name=TCONS_00014605|organism=Clytia hemisphaerica|type=transcript|length=216bp
GGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATCATT
ACCGTAATGAATGCTCTTTGGAGTGTGAATACACTGTGAACTGTATTGAC
TCATTGAAGTAGATGTGGAGTTTCTCTTCGAGAGAAGAGAATTGAATTAG
TTTCGTGCTATGCTCCACACTTCTCAATCAATAACAACTATATACACTTA
TTCCAATCTTGTGATT
Run BLAST on NCBI

transcript from alignment at sc0000190:8533..8748

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014605 ID=TCONS_00014605|Name=TCONS_00014605|organism=Clytia hemisphaerica|type=transcript|length=216bp|location=Sequence derived from alignment at sc0000190:8533..8748 (Clytia hemisphaerica)
AATCACAAGATTGGAATAAGTGTATATAGTTGTTATTGATTGAGAAGTGT
GGAGCATAGCACGAAACTAATTCAATTCTCTTCTCTCGAAGAGAAACTCC
ACATCTACTTCAATGAGTCAATACAGTTCACAGTGTATTCACACTCCAAA
GAGCATTCATTACGGTAATGATCCTTCCACAGGTTCACCTACGGAAACCT
TGTTACGACTTTTACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008171XLOC_008171Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014605-exon-sc0000190-1491911889:8533..8748TCONS_00014605-exon-sc0000190-1491911889:8533..8748Clytia hemisphaericaexon
TCONS_00014605-exon-sc0000190-1510915933:8533..8748TCONS_00014605-exon-sc0000190-1510915933:8533..8748Clytia hemisphaericaexon
TCONS_00014605-exon-sc0000190-1575043694:8533..8748TCONS_00014605-exon-sc0000190-1575043694:8533..8748Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:8533..8748 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.7921	7.6999	290.56	275.521	69.2138	332.369	118.436	88.7024	95.3719	339.29	311.991	38.564	36.7599	62.717	65.7601	64.1551	161.031	64.8057	90.9316	8.78338	25.4479	20.4807	15.0891	9.60273	24.02	46.6576	18.0451	25.0357	77.4154	16.3701
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014605 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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