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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014693 ID=TCONS_00014693|Name=TCONS_00014693|organism=Clytia hemisphaerica|type=transcript|length=1730bp
GTTATTTCGTTGGTTGATTCAAAAGGACAAAACATATCAACTGCGAACTT
CACGTTCTAAAGTATAATGTCTTCTCCTGCGCTGCTTTTGATCGAACAAC
TGACAAATAGCTTCTCGAGTTTGTGATAACCGTATGATAAAAATCAGCGG
ACGAAACCCGGAACTGAAGAGTACCGTATACAATATAACACATTGTGAAG
CGACCAGGGAATCACACGGGCATTGTTCACAAGCGTACAAATATAAACTG
GAAATAATGAACGGTAAATGGAACAACCAATACGTAGCAGTCATTATAGT
GAGTGTGAGCACAATTCGAATTTCATAAGAACGATGCTTTTTTGGCTTTT
CATGTTCAAGTTCAGTGATGGAAGGCCTGATTGTAGTTACTTGGAATTCC
TCCGCCATAAAATCATCCGTTGTTCCAGGTATTGTTGCCACACTCGGTGT
GTCGGAAGGCTTTCGCAGGTCAGTAGGGAACACATCCAAGTGTGGCGATA
ATTCTATAGACCTCGAGGGTTGGATTGTTTCATGAGGAGGGAGTTCAAGA
TTCGATGATTTTGTTTTGGACGGGATTTTATTGATAGTGGTGGAAGTGTG
TGTGCTAAAGTGTTTCCAGTATGCGATCAAAGTGAAAATCATGATAATTC
CAGAggtaaaaacaaccaaaatagAGAACAGCGTTTGGTACAAAAGTTGG
TTTAAAACATGCTGAATCagcgaaaagaaaaaagatgaaaTCCAAATANC
ATAAAATCATCCGTTGTTCCAGGTATTGTTGCCACACTCGGTGTGTCGGA
AGGCTTTCGCAGGTCAGTAGGGAACACATCCAAGTGTGGCGATAATTCTA
TAGACCTCGAGGGTTGGATTGTTTCATGAGGAGGGAGTTCAAGATTCGAT
GATTTTGTTTTGGACGGGATTTTATTGATAGTGGTGGAAGTGTGTGTGCT
AAAGTGTTTCCAGTATGCGATCAAAGTGAAAATCATGATAATTCCAGAgg
taaaaacaaccaaaatagAGAACAGCGTTTGGTACAAAAGTTGGTTTAAA
ACATGCTGAATCAGCGAAAAGAAAAAGGATGAAATCCAAATAAAGACGAT
AATTACTGTCTGTTTACGATTGTTTAAAGATGATGTGTAGATTTCCGGGT
TCCGTAAAAATGTCAGTCGGTCAACAGCCatgaaagaacaatttaaaatg
gCGGATGCAGCTACGGTGAAAAAGATTGTCAAAAAGATGGAATCCATTGT
GTCGACTGTCTTATATTTCGTGTAACGGCAGTACAGATAAATGAAATACG
GTGCAGCAACGGTACCGGTTAAAAAGTCTGATATCCCAATATTTTTGATG
ATCAGATAAAATTTGGATCGGTTTGCAGATCTTCTAAAGACGGAGTACAA
AAGCAAGGAATTTGTGAGAATGCTAAATAGCATCCCGATGACGACCAAAA
TGAGTTGAACGTTCATACTGTTGGAGAGTGTGTAATGACATAGCGATTGG
AAGAAAAGCATGGGCTGCCATTCAAAATGATGTGTGTAAAAATGTTGTTG
GACGATTCTACCTCTTCTTTACCGTTTCGTTTTAcgctgaaaatgaaaga
aaggaATAAAACGATAAATGATAAACGATAAATGGTCTCAGGAACTACTG
AAGATTTCGACTTGAAAGACATCTAAGTCagtgtacaaaatttcaattca
gtaaTGTGTGGAGTTGATATTTAACAGACC Run BLAST on NCBI transcript from alignment at sc0000197:258254..260287+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014693 ID=TCONS_00014693|Name=TCONS_00014693|organism=Clytia hemisphaerica|type=transcript|length=2034bp|location=Sequence derived from alignment at sc0000197:258254..260287+ (Clytia hemisphaerica)
GTTATTTCGTTGGTTGATTCAAAAGGTATTGACTATTGATGTTGTTAAAA
AATCGGCTTTTCTATAGAAAATCCTGATATCTTTACATCAATTTCAGACA
ATTTTTAGACTCAAAAGTCACATTAAAACACCGTCCATCCACATATTTCT
AGAGATGTCGAGAAACacaaaaatcacacaaaaattcactGGAATTCCGT
CCTAAAAGTTTAGTTTTCTACGTGACAAGGCCTACGATACACAGGGATAA
TGTAGATGCTgcataatttgaaattttgatcttcAATATTTCCTTTCatt
aaatttcataaaaacctAAATTGTTTTAGGACAAAACATATCAACTGCGA
ACTTCACGTTCTAAAGTATAATGTCTTCTCCTGCGCTGCTTTTGATCGAA
CAACTGACAAATAGCTTCTCGAGTTTGTGATAACCGTATGATAAAAATCA
GCGGACGAAACCCGGAACTGAAGAGTACCGTATACAATATAACACATTGT
GAAGCGACCAGGGAATCACACGGGCATTGTTCACAAGCGTACAAATATAA
ACTGGAAATAATGAACGGTAAATGGAACAACCAATACGTAGCAGTCATTA
TAGTGAGTGTGAGCACAATTCGAATTTCATAAGAACGATGCTTTTTTGGC
TTTTCATGTTCAAGTTCAGTGATGGAAGGCCTGATTGTAGTTACTTGGAA
TTCCTCCGCCATAAAATCATCCGTTGTTCCAGGTATTGTTGCCACACTCG
GTGTGTCGGAAGGCTTTCGCAGGTCAGTAGGGAACACATCCAAGTGTGGC
GATAATTCTATAGACCTCGAGGGTTGGATTGTTTCATGAGGAGGGAGTTC
AAGATTCGATGATTTTGTTTTGGACGGGATTTTATTGATAGTGGTGGAAG
TGTGTGTGCTAAAGTGTTTCCAGTATGCGATCAAAGTGAAAATCATGATA
ATTCCAGAggtaaaaacaaccaaaatagAGAACAGCGTTTGGTACAAAAG
TTGGTTTAAAACATGCTGAATCagcgaaaagaaaaaagatgaaaTCCAAA
TANCATAAAATCATCCGTTGTTCCAGGTATTGTTGCCACACTCGGTGTGT
CGGAAGGCTTTCGCAGGTCAGTAGGGAACACATCCAAGTGTGGCGATAAT
TCTATAGACCTCGAGGGTTGGATTGTTTCATGAGGAGGGAGTTCAAGATT
CGATGATTTTGTTTTGGACGGGATTTTATTGATAGTGGTGGAAGTGTGTG
TGCTAAAGTGTTTCCAGTATGCGATCAAAGTGAAAATCATGATAATTCCA
GAggtaaaaacaaccaaaatagAGAACAGCGTTTGGTACAAAAGTTGGTT
TAAAACATGCTGAATCAGCGAAAAGAAAAAGGATGAAATCCAAATAAAGA
CGATAATTACTGTCTGTTTACGATTGTTTAAAGATGATGTGTAGATTTCC
GGGTTCCGTAAAAATGTCAGTCGGTCAACAGCCatgaaagaacaatttaa
aatggCGGATGCAGCTACGGTGAAAAAGATTGTCAAAAAGATGGAATCCA
TTGTGTCGACTGTCTTATATTTCGTGTAACGGCAGTACAGATAAATGAAA
TACGGTGCAGCAACGGTACCGGTTAAAAAGTCTGATATCCCAATATTTTT
GATGATCAGATAAAATTTGGATCGGTTTGCAGATCTTCTAAAGACGGAGT
ACAAAAGCAAGGAATTTGTGAGAATGCTAAATAGCATCCCGATGACGACC
AAAATGAGTTGAACGTTCATACTGTTGGAGAGTGTGTAATGACATAGCGA
TTGGAAGAAAAGCATGGGCTGCCATTCAAAATGATGTGTGTAAAAATGTT
GTTGGACGATTCTACCTCTTCTTTACCGTTTCGTTTTAcgctgaaaatga
aagaaaggaATAAAACGATAAATGATAAACGATAAATGGTCTCAGGAACT
ACTGAAGATTTCGACTTGAAAGACATCTAAGTCagtgtacaaaatttcaa
ttcagtaaTGTGTGGAGTTGATATTTAACAGACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014693-exon-sc0000197-1491911889:258254..258278 | TCONS_00014693-exon-sc0000197-1491911889:258254..258278 | Clytia hemisphaerica | exon |
| TCONS_00014693-exon-sc0000197-1510915933:258254..258278 | TCONS_00014693-exon-sc0000197-1510915933:258254..258278 | Clytia hemisphaerica | exon |
| TCONS_00014693-exon-sc0000197-1575043694:258254..258278 | TCONS_00014693-exon-sc0000197-1575043694:258254..258278 | Clytia hemisphaerica | exon |
| TCONS_00014693-exon-sc0000197-1491911889:258583..260287 | TCONS_00014693-exon-sc0000197-1491911889:258583..260287 | Clytia hemisphaerica | exon |
| TCONS_00014693-exon-sc0000197-1510915933:258583..260287 | TCONS_00014693-exon-sc0000197-1510915933:258583..260287 | Clytia hemisphaerica | exon |
| TCONS_00014693-exon-sc0000197-1575043694:258583..260287 | TCONS_00014693-exon-sc0000197-1575043694:258583..260287 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:258254..260287 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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