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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014698 ID=TCONS_00014698|Name=TCONS_00014698|organism=Clytia hemisphaerica|type=transcript|length=2234bp
GTATGATATAAAAATTGTTGtagttgtttttttattgtgaGTTTGTAACA
GTGGCTCATGGGGTTGAGAAGTGAGGATCTTTTACATTGATATGTGGGGT
GCCAAAACGAAGCGCAAGATCAGTCAGCCTTTCCGCAGGCTACAGCCCGT
TCAAGAAACGAGTCACGCGAACATTCACGAAAACACGACTCTTGCTCACG
AAATGGAAACAAACACCACAAGATCACGACCTCGTTCGAAAACATTGGCT
GATATCTCACAGGATTCATTTGAGATTAGACGTCGTTCAGAAGATTCACA
CAAAGCTAGCATTTTCAGTCACCTTGGTCACACTATATTTGTTCACCATC
ATAAATCGGATAAAGAGAGAGTCCATGGATACAAGTCTTTCAAAATTCTC
GTTCTCGGTGTTAAAGAAGTCGGTAAAACGTCAATCATAAAACGTTTCAT
CAATGGTAAATTCAACGACGAATATCTGCCGACAATTTCCGAAGAATATG
AAACAGGtatatttctcgagattgaaaataaattaaaacagTTTGATCTT
GTTTTCAAAGACTTTGGAGGTgacttaaaaacattttatccAGAACTTTA
CAAAGATGAAGTCAAAAGTGCAGATGGATTTATATTAGTACACACGGAAA
ACATCCCAGAAAGCTTTGCAGAAGTATTAGAAATGGTAGCTGATATCCAG
CATGCAAGGCGTCAAGAAGTCTCAATTATGATTCTAGAAAATCAAAGTGA
GCGACAGAAtcagtttgatgtttttaaagtTACCAGGAAATCGTTCATTA
TGGAGGGAATGTTGAATGATTCAGTATCAGCCAAAATGAATTATAGAGTT
GATGAATCAATCGCTGAACTCGTCAAAGAAATGGAGAAGAAGCTCACGTG
AGCTTTatattatctttccaacgatctAAACATCTCAAACGAGGTTGTGT
TATTGATATGTTCAGAGAGGAAACTGGtttgagaaatatttgaaatagaa
atctttttattccaaaaaaaaagaaaaaggttcaGAAAATGATACCATGT
CTTGACTAGCATGTATTCTAAAGGGAtgtattttaaaacttttcccCTGC
AATCATTACGATTATCTCAAAAGGAAACAGCGGAATGAAATAGGATGTAC
TTGTGAAAAATGACAGTTTAAATATACTTTTATcaacaaacacaaaaaaa
tattcaagaaattTGATACTTTCAAGTTTCGAAATTCCATTTTGACCGCA
ATAGAGCTACTTCGCTACTAAGTGGCACGTATAAGCTTTTTTGATATCAG
ATTTCCTAattaaattttaagatattatgAGACAAATTCTAAAGTTACCT
TAGCGGCCCTTtctacaccggcccttattggagTTATTTTTCGTCGCTGG
TGAAATGAGTACGCCGGCGTAAGGGCTCAGAATTAAGGCGGGCTAGAGAT
GGAAAAATTGATCTTGTGCTATAAGAACTGGCGCTTAATTAaggaccggc
gtaaaaagggccgacaAGGTAAATACAAGAAAGATATTCTTAAAGAAAAT
TCATACCTTTATACCAGAGCTATAGGAACGGTGAAAATGTCTCTCATTCA
TTGCCAGTCACGTTATCAACACATTCAAGTACATTCTTTCGACAGCCAAA
CTTAGCTAAACTttctttttaatatatttttttcattttctatatTTTGA
CTCTAAATGAAAAGACGAGAAGAGATTCAATTAAAGTTTTCTATTATTAT
AAAGTGCCCTTAACGATACTAGCCTTTTTTCCACCATACTTTATCCTAAG
GATAGGGTAGGAATCATTTTACAGATCCATCCACCAATGGTCCACCCAAA
GTTTTCCACTAACCGTCATTTAATCATAATTATTATAGCACCACTGGCCC
ATCGTGTACCCAAACTTCTCCACTGGCCCATTGTCGTGGCAATTTCCTCT
CAGGAAAAAATTTACCCATGAAAAATGGTCTAAAGTAGATGAGTCTGTCG
ATTTAGTGTATTTTCTTTTCACACTAGTTTaggtttgcaaaaaaaattta
tacatatctttttattatatatattatgtacagttgaaattttatcaaat
attatcAGTATATTGAATAATAGAATCAACATCCTCTGTCAAAAAGGTAG
CATGTTTCAAAATTGCTCATCTTTATTGTGTCTTTTTTAAAGTAAACAGg
tttatttgtctttttctatcaatgtacacgtttt Run BLAST on NCBI transcript from alignment at sc0000197:311699..315608+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014698 ID=TCONS_00014698|Name=TCONS_00014698|organism=Clytia hemisphaerica|type=transcript|length=3910bp|location=Sequence derived from alignment at sc0000197:311699..315608+ (Clytia hemisphaerica)
GTATGATATAAAAATTGTTGtagttgtttttttattgtgaGTTTGTAACA
GTGGCTCATGGGGTTGAGAAGTGAGGATCTTTTACATTGATATGTGGGGT
GCCAAAACGAAGGTTTGTTCAATTACTTTATTGaggaataaatatttcaa
aaagaattcatCGAGTCTTTTAGAGAAACGAATATAAGTCATATCATGGA
CTTGGATGAAAGTAAATGTATTTTCACTTCGCATTCTTTCACAGAAAATA
ACTTTACCAAATACGCTTGAAGATCTTTGTAGTATAGCATTCTTTATATT
TGTTGCGATTTGTTTGAGTTTTTCATTTAAAGATTTAATATTCAAATAGC
AATCAATTTCAGGTGGGTAAATAGTTAAACGTCATCTTTGAATTTCATCT
TCTTGATAAAATCCTTTCACATGAGGGTTGTCACTCAGACGCTTGTTTAg
acattttcttccaaatttttaaagaaaatcataTGCCCCATTAGATCTTT
CGTGGACACTCCGAGTGTTATAATTTGATGATATTCTGAAATAAGCAAGA
AGCTTGAAATACTGACTATTCAAGGCCAATTCCATGATAGTATACAACTA
TCACCATTTAAAGCGTGGGGAGACTGGGTTCGATTTTACCAGGAAGAATG
ACTGAAGTTTGGCGTTCTCATAAAACAATGTATTTTGACGtcattactct
taggttccaaataaacaggggggttcAAATAAACGGGgagacctaattgc
cggggggttggaaattgtacttctgaagacccaaaaataaggtaaatata
ggctaaaatggGGCTATTCagagcaaaataaggaaaattttggaaaaatt
aataaggggggggggggggcgtttatttggaacctaagagtacctcTCAC
AAGCGCTGTAAAGGGCTGATAGGTGAATTTGTCTAAGTATCTCTGGGATA
TCTTATACAAGATGTGAAATTTAACCTTTAAAAAACAGTTTCTCAACTTG
CTGCAAGATACACCTGACAGTTGTGTGTTGGCTCTTCAACGACATGGTAA
TCCAACTACGTGGCAGAAAATACCTTGTAAATCAAACGCCAAAGACTTtg
aatttttggtatttttactTAAGCCTTTTGTAGACTAACTGTGGCGGACT
AATCCAATGTCACTTTATAATTTATATTTACACTTCCCCAAAAAAAGGCT
TTTTCCCAATTGGATTGGCTTAAGGGTAGGCTAAAAACTTATTGTAAAAC
GATACGCAAAACGAAACATAGAGAAGAAACTAAAACTAATGAAAAACTTC
GAAGGTATGAGAAACAAATAGCCGGGCGAAGATTTTTGAAGAAGtgaaaa
tttgcaatatttttccaTTTCCACTTTATTTGAACAAGTTTTCAAACAAA
CCAGAAAGAAATACAACCAAATGTTATAAATAGATGATGAAGAGATATCT
CTTTTCATAATGAAGTGGTTTGTGCCAAGGATAGTAAAACATTTGACCAC
AAGTGAAATTAGTGGACTTTTCGTCCTACTGGAAGCCTGGTAGCAGGTGG
TAATAATGGATGAGAAAATTAGCAAAGCAAGGGTATACCAACTTTCaaca
atttaatttcaattttaaagggAAAATGTAGCAAAGTGCCATgaaagtga
caaaaaatcagtctaaaataataattaaaaattaaagctttttctaaagc
aaattatttttaaagggTCTAAAATAGCGAAGGAAAAGGTCCTGAGGAGG
CGTTTGTTAAGCGTAAtttgttttccatttttctttagCGCAAGATCAGT
CAGCCTTTCCGCAGGCTACAGCCCGTTCAAGAAACGAGTCACGCGAACAT
TCACGAAAACACGACTCTTGCTCACGAAATGGAAACAAACACCACAAGAT
CACGACCTCGTTCGAAAACATTGGCTGATATCTCACAGGATTCATTTGAG
ATTAGACGTCGTTCAGAAGATTCACACAAAGCTAGCATTTTCAGTCACCT
TGGTCACACTATATTTGTTCACCATCATAAATCGGATAAAGAGAGAGTCC
ATGGATACAAGTCTTTCAAAATTCTCGTTCTCGGTGTTAAAGAAGTCGGT
AAAACGTCAATCATAAAACGTTTCATCAATGGTAAATTCAACGACGAATA
TCTGCCGACAATTTCCGAAGAATATGAAACAGGtatatttctcgagattg
aaaataaattaaaacagTTTGATCTTGTTTTCAAAGACTTTGGAGGTgac
ttaaaaacattttatccAGAACTTTACAAAGATGAAGTCAAAAGTGCAGA
TGGATTTATATTAGTACACACGGAAAACATCCCAGAAAGCTTTGCAGAAG
TATTAGAAATGGTAGCTGATATCCAGCATGCAAGGCGTCAAGAAGTCTCA
ATTATGATTCTAGAAAATCAAAGTGAGCGACAGAAtcagtttgatgtttt
taaagtTACCAGGAAATCGTTCATTATGGAGGGAATGTTGAATGATTCAG
TATCAGCCAAAATGAATTATAGAGTTGATGAATCAATCGCTGAACTCGTC
AAAGAAATGGAGAAGAAGCTCACGTGAGCTTTatattatctttccaacga
tctAAACATCTCAAACGAGGTTGTGTTATTGATATGTTCAGAGAGGAAAC
TGGtttgagaaatatttgaaatagaaatctttttattccaaaaaaaaaga
aaaaggttcaGAAAATGATACCATGTCTTGACTAGCATGTATTCTAAAGG
GAtgtattttaaaacttttcccCTGCAATCATTACGATTATCTCAAAAGG
AAACAGCGGAATGAAATAGGATGTACTTGTGAAAAATGACAGTTTAAATA
TACTTTTATcaacaaacacaaaaaaatattcaagaaattTGATACTTTCA
AGTTTCGAAATTCCATTTTGACCGCAATAGAGCTACTTCGCTACTAAGTG
GCACGTATAAGCTTTTTTGATATCAGATTTCCTAattaaattttaagata
ttatgAGACAAATTCTAAAGTTACCTTAGCGGCCCTTtctacaccggccc
ttattggagTTATTTTTCGTCGCTGGTGAAATGAGTACGCCGGCGTAAGG
GCTCAGAATTAAGGCGGGCTAGAGATGGAAAAATTGATCTTGTGCTATAA
GAACTGGCGCTTAATTAaggaccggcgtaaaaagggccgacaAGGTAAAT
ACAAGAAAGATATTCTTAAAGAAAATTCATACCTTTATACCAGAGCTATA
GGAACGGTGAAAATGTCTCTCATTCATTGCCAGTCACGTTATCAACACAT
TCAAGTACATTCTTTCGACAGCCAAACTTAGCTAAACTttctttttaata
tatttttttcattttctatatTTTGACTCTAAATGAAAAGACGAGAAGAG
ATTCAATTAAAGTTTTCTATTATTATAAAGTGCCCTTAACGATACTAGCC
TTTTTTCCACCATACTTTATCCTAAGGATAGGGTAGGAATCATTTTACAG
ATCCATCCACCAATGGTCCACCCAAAGTTTTCCACTAACCGTCATTTAAT
CATAATTATTATAGCACCACTGGCCCATCGTGTACCCAAACTTCTCCACT
GGCCCATTGTCGTGGCAATTTCCTCTCAGGAAAAAATTTACCCATGAAAA
ATGGTCTAAAGTAGATGAGTCTGTCGATTTAGTGTATTTTCTTTTCACAC
TAGTTTaggtttgcaaaaaaaatttatacatatctttttattatatatat
tatgtacagttgaaattttatcaaatattatcAGTATATTGAATAATAGA
ATCAACATCCTCTGTCAAAAAGGTAGCATGTTTCAAAATTGCTCATCTTT
ATTGTGTCTTTTTTAAAGTAAACAGgtttatttgtctttttctatcaatg
tacacgtttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014698-exon-sc0000197-1491911889:311699..311810 | TCONS_00014698-exon-sc0000197-1491911889:311699..311810 | Clytia hemisphaerica | exon |
| TCONS_00014698-exon-sc0000197-1510915933:311699..311810 | TCONS_00014698-exon-sc0000197-1510915933:311699..311810 | Clytia hemisphaerica | exon |
| TCONS_00014698-exon-sc0000197-1575043694:311699..311810 | TCONS_00014698-exon-sc0000197-1575043694:311699..311810 | Clytia hemisphaerica | exon |
| TCONS_00014698-exon-sc0000197-1491911889:313487..315608 | TCONS_00014698-exon-sc0000197-1491911889:313487..315608 | Clytia hemisphaerica | exon |
| TCONS_00014698-exon-sc0000197-1510915933:313487..315608 | TCONS_00014698-exon-sc0000197-1510915933:313487..315608 | Clytia hemisphaerica | exon |
| TCONS_00014698-exon-sc0000197-1575043694:313487..315608 | TCONS_00014698-exon-sc0000197-1575043694:313487..315608 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:311699..315608 + |
Blast
The following BLAST results are available for this feature:
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