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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014723 ID=TCONS_00014723|Name=TCONS_00014723|organism=Clytia hemisphaerica|type=transcript|length=920bp
AGAAAACAATATGGAACCATTCACAAAATTCTCCTTACGTGTTTCCTTTT
TTGCTGTATGAAACTCTTTTGCTTATTTTCTCGAAAAAGTTGGCGAAATG
GAAATCGTTGTAGCAAGCCCTTTCGAGAACGAAGAAGCTTAATATCGACA
TTACAAAGAAATGGAGGAAATGAACCGAACTATTGTTAGTTTGCGTGAAA
TTATcgatgaaaaagatgaaatcaTCAGGACAGtTCGTGCAAAACTTGAA
GAAAGCGAAAAAAGGAGAGGgcgaaagaaagaaattatacaactcttaaa
aactgaaaatatgcGTCTCTCTAAAAAGATGGACAAAATCAAGAAGGTCT
CAGAGGCTCACCATCTCTCTCAACTTCAATCGAACGAACATGGAAACAAT
GACATTATAAAGGGCAAATCGAATCATAATGGTAGCCACAGTATTGATCA
ACTTTGGAAGGAgaatgaagaattgaaaaagatGATAGCGTCACAGGAAA
AGAAAATGGAATTCCTTGAAGTGAGAAACAAGTTCTTCGAAAACTACTAC
AGATCTAAAGATAAGGATATTGAAcaacaaaaaaattcgaaaatagaaaa
gaacaagacaagatttacaaaaatttgaCCGAACACTGCGATGTTagttt
tacaaaatatctttcggtgtataaatattttcacaaaCAAGATACATAAA
TATTTTCCATGTACAAATTCTAAACATAACAAATTATTATATAAACTAGT
GCAACACGACTAAGAAAGTTGTAAAATAGCAACGATtttgtttcaacatt
tttcacATGTGAACAAATTATTAATTTTTGTCCGATGCAAACTTTCTATA
TTTCACGAAGTACCAAGTTTCAGTCAGCTCTCTCAATTATACTCCAGGCG
AAAAGAAAGCGATACCGTAC Run BLAST on NCBI protein sequence of TCONS_00014723-protein >TCONS_00014723-protein ID=TCONS_00014723-protein|Name=TCONS_00014723-protein|organism=Clytia hemisphaerica|type=polypeptide|length=155bp
MEEMNRTIVSLREIIDEKDEIIRTVRAKLEESEKRRGRKKEIIQLLKTEN
MRLSKKMDKIKKVSEAHHLSQLQSNEHGNNDIIKGKSNHNGSHSIDQLWK
ENEELKKMIASQEKKMEFLEVRNKFFENYYRSKDKDIEQQKNSKIEKNKT
RFTKI Run BLAST on NCBI transcript from alignment at sc0000197:256786..258009- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014723 ID=TCONS_00014723|Name=TCONS_00014723|organism=Clytia hemisphaerica|type=transcript|length=1224bp|location=Sequence derived from alignment at sc0000197:256786..258009- (Clytia hemisphaerica)
AGAAAACAATATGGAACCATTCACAAAATTCTCCTTACGTGTTTCCTTTT
TTGCTGTATGAAACTCTTTTGCTTATTTTCTCGAAAAAGTTGGCGAAATG
GAAATCGTTGTAGCAAGCCCTTTCGAGAACGAAGAAGCTTAATATCGACA
TTACAAAGAAATGGAGGAAATGAACCGAACTATTGTTAGTTTGCGTGAAA
TTATCGATGAAAAAGATGAAATCATCAGGACAGGTACTCTTTCAAATTTA
GAATCTTATGATTGTGATTAGCTTTTTCCTTTGAACTTTATTTCAGGTTG
TAAAATTTTACATAAAAAACGATTTTGAAAGTTATTCGGCTGCATTGATG
TGAATTAGGTTAGTTTCATCTAGTCTTCATCGAAAATTTAGCGAGAGAAC
GAGAAATGGATAAGTCTTTGGCGTGAAAATTTTTCTTGCAAAATATTCGT
TAAGGGCCGTTAAGGCACATTTTGTTAATTACGATGAATTACTGTAAGGT
TCAAACATCTTTGAAACAACTTTTTTCACAATTTTAGTTCGTGCAAAACT
TGAAGAAAGCGAAAAAAGGAGAGGGCGAAAGAAAGAAATTATACAACTCT
TAAAAACTGAAAATATGCGTCTCTCTAAAAAGATGGACAAAATCAAGAAG
GTCTCAGAGGCTCACCATCTCTCTCAACTTCAATCGAACGAACATGGAAA
CAATGACATTATAAAGGGCAAATCGAATCATAATGGTAGCCACAGTATTG
ATCAACTTTGGAAGGAGAATGAAGAATTGAAAAAGATGATAGCGTCACAG
GAAAAGAAAATGGAATTCCTTGAAGTGAGAAACAAGTTCTTCGAAAACTA
CTACAGATCTAAAGATAAGGATATTGAACAACAAAAAAATTCGAAAATAG
AAAAGAACAAGACAAGATTTACAAAAATTTGACCGAACACTGCGATGTTA
GTTTTACAAAATATCTTTCGGTGTATAAATATTTTCACAAACAAGATACA
TAAATATTTTCCATGTACAAATTCTAAACATAACAAATTATTATATAAAC
TAGTGCAACACGACTAAGAAAGTTGTAAAATAGCAACGATTTTGTTTCAA
CATTTTTCACATGTGAACAAATTATTAATTTTTGTCCGATGCAAACTTTC
TATATTTCACGAAGTACCAAGTTTCAGTCAGCTCTCTCAATTATACTCCA
GGCGAAAAGAAAGCGATACCGTAC Coding sequence (CDS) from alignment at sc0000197:256786..258009- >TCONS_00014723 ID=TCONS_00014723|Name=TCONS_00014723|organism=Clytia hemisphaerica|type=CDS|length=936bp|location=Sequence derived from alignment at sc0000197:256786..258009- (Clytia hemisphaerica)
TTCGTGCAAAACTTGAAGAAAGCGAAAAAAGGAGAGGGCGAAAGAAAGAA
ATTATACAACTCTTAAAAACTGAAAATATGCGTCTCTCTAAAAAGATGGA
CAAAATCAAGAAGGTCTCAGAGGCTCACCATCTCTCTCAACTTCAATCGA
ACGAACATGGAAACAATGACATTATAAAGGGCAAATCGAATCATAATGGT
AGCCACAGTATTGATCAACTTTGGAAGGAGAATGAAGAATTGAAAAAGAT
GATAGCGTCACAGGAAAAGAAAATGGAATTCCTTGAAGTGAGAAACAAGT
TCTTCGAAAACTACTACAGATCTAAAGATAAGGATATTGAACAACAAAAA
AATTCGAAAATAGAAAAGAACAAGACAAGATTTACAAAAATTTGAATGGA
GGAAATGAACCGAACTATTGTTAGTTTGCGTGAAATTATCGATGAAAAAG
ATGAAATCATCAGGACAGTTCGTGCAAAACTTGAAGAAAGCGAAAAAAGG
AGAGGGCGAAAGAAAGAAATTATACAACTCTTAAAAACTGAAAATATGCG
TCTCTCTAAAAAGATGGACAAAATCAAGAAGGTCTCAGAGGCTCACCATC
TCTCTCAACTTCAATCGAACGAACATGGAAACAATGACATTATAAAGGGC
AAATCGAATCATAATGGTAGCCACAGTATTGATCAACTTTGGAAGGAGAA
TGAAGAATTGAAAAAGATGATAGCGTCACAGGAAAAGAAAATGGAATTCC
TTGAAGTGAGAAACAAGTTCTTCGAAAACTACTACAGATCTAAAGATAAG
GATATTGAACAACAAAAAAATTCGAAAATAGAAAAGAACAAGACAAGATT
TACAAAAATTTGAATGGAGGAAATGAACCGAACTATTGTTAGTTTGCGTG
AAATTATCGATGAAAAAGATGAAATCATCAGGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014723-exon-sc0000197-1575043694:257777..258009 | TCONS_00014723-exon-sc0000197-1575043694:257777..258009 | Clytia hemisphaerica | exon |
| TCONS_00014723-exon-sc0000197-1575043694:256786..257472 | TCONS_00014723-exon-sc0000197-1575043694:256786..257472 | Clytia hemisphaerica | exon |
| TCONS_00014723-exon-sc0000197-1510915933:257777..258009 | TCONS_00014723-exon-sc0000197-1510915933:257777..258009 | Clytia hemisphaerica | exon |
| TCONS_00014723-exon-sc0000197-1510915933:256786..257472 | TCONS_00014723-exon-sc0000197-1510915933:256786..257472 | Clytia hemisphaerica | exon |
| TCONS_00014723-exon-sc0000197-1491911889:257777..258009 | TCONS_00014723-exon-sc0000197-1491911889:257777..258009 | Clytia hemisphaerica | exon |
| TCONS_00014723-exon-sc0000197-1491911889:256786..257472 | TCONS_00014723-exon-sc0000197-1491911889:256786..257472 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:256786..258009 - |
Blast
The following BLAST results are available for this feature:
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