TCONS_00014733 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014733
Unique NameTCONS_00014733
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2096

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014733 ID=TCONS_00014733|Name=TCONS_00014733|organism=Clytia hemisphaerica|type=transcript|length=2096bp
AATTTAAGTTAAACTGATCTATCATCCTCAAAGAGGTAACATGTTGAACA
GAAGTACTGTGACAAATTTCTACCTTTTTAGGTGAAACTACAATGACCAA
GGAAgaattccaaaaaatgaaacaaGAACTTGAAGCAGAATATTTGGCTA
CCTTCAAGAAGACAGTGGCAATGCACGAAGTATTTTTGACAAGATTGGCT
CATCATCCTGTTCTTCGGAATGATCATAATTTTAGAGTTTTCTTAGAATA
CAAAGAGGATCTCAGTGTTCGTGGTAAAAATACAAGAGAATTCTTGAAGG
GCCTTGCCAAAGGCATTGCCAAGGGAGTGGATGAAAAAGTTTTACTCTCT
GGTCAAAAGGATGTTGATGAATATTTCGAATCAGAGAAAAGATTTTACGT
CGAATTTCATAACAGggcAAAAGATGCATCAATGAAATGTGATAAGATGA
CTTCTTTACACAAACGAATGTCAGATATTCTTATCAAAGTTTCTGGTGGC
CTTAGTGTAATGGGGACTAGTGAAAACACCAACCTTGCACCATTCTTGAA
CAAAACTTCAGAGTCGTTGGAAAAACTAAGGAAATTGGAGGGTCGAATGG
CAACAGATGAGGACTTGAAACTTGGAGATCTTTTACGATATCACCAACGA
GATGCTCAGGCAGCAAAAGGATTACTTTATCGTCGAATGAGATGTCTGGC
CAACTTGGAGAACGCAAACAAGAATTTGGATAAAGCGAGAGCAAAGAATA
AGGACGTAGCTGCGgCAACCACTGCGCAACaagtcgcaagtgaaaaattc
GAATCACTCTCAGAAACTGCAAAAGGAGAACTTGGTGAACTACGAAAAAA
GAAAGTATCccatttcaaaaagaatttaggtGAATTAGCTGACTTAGAAT
TAAAGCATGCGAAGGCACAAGTAACGTTGCTGACAAACACATTACAAGCG
TTACGTGAAATGTAGGACCATTAATAATCATTATTTCGggacttttttta
taaaatttgattaacatgatttcttttgtttttgttttgtaaatattata
ctgttttcttgacaaaatctttttttcttacaaaaaaatcaacaagcATA
CATATAATTTATTATAATGATTATGAATTTGAATATTAGTCGccacattt
tcaaatttctggATATAAGTTATccatttttcacttttgaagTTTGATTG
CTCTTCTTACTCAAAGCTTTTTTAACTATTTTCATTAATCTAATCCCCTC
AACAgtttaattaatttaattttgattttattcttcTGAACGGATTTgtt
cattgttttttatttttatgttaatgtttacttttgaaaatattgtcttt
ttttataaatgataATTAACGAAACTCAATAGCCGCCTATAGCCAACTAT
TAAGATTTTCTGAAAACTTAACGATAATATAGAAATTACTAATCAACATT
AAATAGTAATACACAAGTTTTTTCGATGAACTTTATCTTGTTGAACAGTc
tgataaatatatttttagttaAATATTTCAATAGAGAATTAAATTTCTTT
ACATAATAAAATCTAATAAATGAATACAATTTTGCTtctaatgggctctt
ccagaaaaaaaccattcatgggaagtggaggatatattgtccaagggtat
tgaaaaaaccctgaaaaactgccatCAGAATTCTGACTCTTATTGCGAAA
TCCCAACCTTGTTCCCtgtgcattatcagctttttcattcctaccatgaa
catataaacgactgaacatctatcttttattgtctctttgaagcgagctt
cgttgccgcctgtatttcaaaattggtttgaaaaatccgacaaatcATGT
GTCCtgaatatcaaaattagaatgtgaccctctctaaaattattcaaCAC
TTTTAAGtcgaaatttagaaatattagtcgtttatatgttcatgttcCTA
CTAACAGCGTCAATCAGTCTATAAATAAACCCTGGGATACACGAGCACGA
GATTGATTAAAGAATTCAGTTTTATTGAAGTAAAACTAAGAAGCTGCTGA
AAGCCAGCCAAGATTCTTAGGTCCTGCGAATCAGAAGATTTGGTAA
Run BLAST on NCBI

protein sequence of TCONS_00014733-protein

>TCONS_00014733-protein ID=TCONS_00014733-protein|Name=TCONS_00014733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MTKEEFQKMKQELEAEYLATFKKTVAMHEVFLTRLAHHPVLRNDHNFRVF
LEYKEDLSVRGKNTREFLKGLAKGIAKGVDEKVLLSGQKDVDEYFESEKR
FYVEFHNRAKDASMKCDKMTSLHKRMSDILIKVSGGLSVMGTSENTNLAP
FLNKTSESLEKLRKLEGRMATDEDLKLGDLLRYHQRDAQAAKGLLYRRMR
CLANLENANKNLDKARAKNKDVAAATTAQQVASEKFESLSETAKGELGEL
RKKKVSHFKKNLGELADLELKHAKAQVTLLTNTLQALREM
Run BLAST on NCBI

transcript from alignment at sc0000197:333174..338703-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014733 ID=TCONS_00014733|Name=TCONS_00014733|organism=Clytia hemisphaerica|type=transcript|length=5530bp|location=Sequence derived from alignment at sc0000197:333174..338703- (Clytia hemisphaerica)
AATTTAAGTTAAACTGATCTATCATCCTCAAAGAGGTAACATGTTGAACA
GAAGTACTGTGACAAATTTCTACCTTTTTAGGTGAAACTACAATGACCAA
GGAAGAATTCCAAAAAATGAAACAAGAACTTGAAGCGTAAGGCAAAAATT
TTTATAATTGTTGGAGACATGAAACTGTCAGTATTGATACAATAATTTTC
ACTACTTCAACTATCATATAATGATATATCAATACCTTTTCAGGGATAAT
AAATTATCACAAGCCTTAAACACAGGTATTTGTCAAGCCTACTCCCATTT
ATACATATATTTTTTAATTATACAGAATTATATAGATTCATATTTCTCTT
AACAACGTTCTCTGCTTTTTTCCAGAGAATATTTGGCTACCTTCAAGAAG
ACAGTGGCAATGCACGAAGTATTTTTGACAAGATTGGCTCATCATCCTGT
TCTTCGGAATGATCATAATTTTAGAGTTTTCTTAGAATACAAAGAGGATG
TAAGTTCATATTAATTCTTTTCAAGGGTAAATATAGCTGAAAGGAAGATT
CTTTAGAAATACTTGTTAGATGGCTTGTTAGATTATTTGAAAAAAACTAT
TTCTATTTGTAAATGTAAATGGTCAGTCTGAATTAAAGTCAATTGAATTT
TTGATAGAATCTTTGTATAAGTTCTGACTGGACATATCTAAAATTTTGTG
ATTTGTCCTTAAATTTTTACTTTATCTTCAAAATGTTAAAAGTTGAATTT
AAATGCTTTAGATACGGAATGTTATAATTTTCTATTCAATCTTACTACTA
GGAGTTTTGAGTAACCTGGAGAAACATTTAGGCAAAATGTGATTTTCTAG
CTCTATTAAGTTTTCCAATTTTGCTTGATTCTTTATGCATCTAGTCCTTC
CTTCCATCGCAGCTATTTAACTTCTTTACAAAGTATCCAACTAATAATCT
AACTATATTGGCTGACCTTCCAGCCTCGGCTGGTTTATTTCAGCTTGTCT
TGAGTTTTTTCTGTGAACTTTTTTGGCCTAAATAGGTAGCTAAGAGCTTA
CTTTGCTTATTAAAGTAAAACAATTTGTGAAGAAGTGTTGTACTTTATTA
ATTCTACTTTTATTTTACTATTACAGCTCAGTGTTCGTGGTAAAAATACA
AGAGAATTCTTGAAGGGCCTTGCCAAAGGCATTGCCAAGGGAGTGGATGA
AAAAGTTTTACTCTCTGGTCAAAAGGTTTGTCACATTTAAGAAATTCACA
TGCTCTTTCAATATCCGTTTGATTCTATGATAAAGCAGTACTTCAGGCAT
AAAAATGTTCAGGATTTTTGCAGTTTTTGCCTCTCTCTGGCAAGTTAATA
TAATGTCTTAAGGCAATTTGTAAGTTTCACGTGAAATGTTTTTATCTTTA
AAACTTCAACATTATAATAAACATGCAATTGCAAGTATATTTTAATCGTT
TGTTGTTGGATTCTAGAAATATTTGTCACTTTTAAACCAACTTGCAATAA
AAAATTCTCATTCCTAGTGAACTTTTCATAAAAGTTTGCTCTTGAGAGTT
TGTCCGTCTGAAGTATTTCAGATCTCACATTTAGCCAATCATGGTTCCAT
TTGTATAAGGATTGATGTTCTTTGTCAAAAGAAACTTTACATGTTAAGTT
AGCAGGAGTTGCTGCTTCTTTCAACTTTGTTTCTTGATTTTATAGGATGT
TGATGAATATTTCGAATCAGAGAAAAGATTTTACGTCGAATTTCATAACA
GGTTAGTGCAAGGGTTATAGTTAGTTTAAATGTTAAATTTTCAGTTTTGT
ATCACCATAAGTTAATTGATTTTTGCTGGTTTTAGTTTGGTGTTTTTAGG
AAAAATCTGTCAAGTTTAATAATAAGGCAACTGCCAAATCAAACACTTGT
CAAGATTGAAAAATCATCATTTCGGTTCAAAGATTTATGAAAAATCAGTA
CTTTTATTAGGTTCAAAGTAATTTTTAATTTTTGGTATCTGTCAATTAAA
GATTAAAATATCTATCAACCATTTGAAAATGGTTTTTTCAATCACCAAAT
TAGATACTCCCCAAAAATACTCCCCAAAAATAAACTTAAGATTCTTTATT
TCTACCCTTTTTACAGAGACACTCATTTTTATTTGATTAGATAATTCTTC
ATTTGTTAAAGCTTAAATGAAAGCAAATCTTATCATTATTACTATTATTA
TTCAATGCATGTCTTTTTATTTTCAGGGCAAAAGATGCATCAATGAAATG
TGATAAGATGACTTCTTTACACAAACGAATGTCAGATATTCTTATCAAAG
TTTCTGGTGGCCTTAGTGTAATGGGGACTAGTGAAAACACCAACCTTGCA
CCGTAAGTCTTTTAACAATTTTAATTTCCATCTTTACATTTTTATATACA
CTCAAACTTATAATATGAATTTTAATCCTGAAAACAAAAGACTTTTCCAT
ATTTCAGCCTTTCAAGCTCTTCGAAATAAAGACTTAGATTTACTTCATAT
ATTTGATTTCAGATTCTTGAACAAAACTTCAGAGTCGTTGGAAAAACTAA
GGGTAAGATTTACGATATTTTTATCGTGTTAAAGAGAACTTCAAGTTTAC
TAGATCATCAGTCACTAAGATTAACAGTCACCCTTACCAACGTATTTTAC
TATTTCGTTGCCATCAGCTTTTGAATTTATCAAAACTTAACGTCAATGCG
AAAACTACAGACGCTTTTTTTCAATTTCTTTTTGAATTTGTTTTGATTCT
AGAAATTGGAGGGTCGAATGGCAACAGATGAGGACTTGAAACTTGGAGAT
CTTTTACGATATCACCAACGAGATGCTCAGGCAGCAAAAGGATTACTTTA
TCGTCGAATGAGATGTCTGGCCAACTTGGAGAACGCAAACAAGAATTTGG
ATAAAGCGAGAGCAAAGAATAAGGACGTAGCTGCGGTAAATAATTGATTT
TCCAACTATGCTTGAAGTACAAAACAACAAATCAATTTTTCCTTTGTATC
CCTTGCCTTTTCTCAACCTTATAGCGTCATTTTTCTTTTGAAAAAGATGT
TATTGTCTTTGGCGTTTGTTATTGTCTTTTGAAATTTCTATTNGAGTACA
AAACAACAAATTAATTTTTCCTTTGTATCCTTTGCCTTTTCTCAACCTTA
TAGCGTCATTTTTCTTTTGAAAAAGATGTTATTGTCTTTGGCGTTTGTTA
TTGTCTTTTGAAATTTCTATTCTTGTTCCAATTATCCTAATCATGTTTTT
TTTTTTGTATAGGCAACCACTGCGCAACAAGTCGCAAGTGAAAAATTCGA
ATCACTCTCAGAAACTGCAAAAGGAGGTAAGACAGGATCATTACATAGTT
TAGATACAAACTCTTTTGAAAGCCAACATAAATTAAAATGAAAGATTGCG
TTTATACCTAACCTAATCATAACAAGGGAATAGATTAGAAATCTTGCAAA
ATTTTTCGAAACATTTCATACCTTTAAACCTATGAAATCTTTTTTGAATA
TTTGACAAGAAAACATCATCATTATTCTTCGTTATTTTTCAGAACTTGGT
GAACTACGAAAAAAGAAAGTATCCCATTTCAAAAAGAATTTAGTAAGTGA
ACAACATGTTTTTTTTTGCTTGATGCATTGAATTGTAAACATTGAGAGCA
ATGATACTCCTTTTTGAAAGTTCTTTTGAAAAGATTTGGCTTTTCGAAGT
AAGGTGGGTGATAGAAGCTGTAAAATCTAGAATAATCTATTTCATAGCAT
GAAGTTAAACTTTTCATTTAGAAGATTGAAAAATGTTAACATAAAGTAGA
GATAGATTTGTGTCAATGTGAACAGATAATGAAATAAAATATTGATTTGA
TTGAATGATAAATTCTTTTTTTTTTCAGGGTGAATTAGCTGACTTAGAAT
TAAAGCATGCGAAGGTAAAACTCTTTATATGTATTATATGCATCTTTGCC
TGTGAAAATAATTCTATTTACCCAAAATTTCATACTCTTTTCAACATAGA
AACGAGAATCCACGGAAATACTTTCTAGTTTTGTCCCATTTGGATTTTTA
GGTAGTATAAAAACCAAATGCATAAAAGTACTGTTATCACTCTTGTCTCT
TGTCTTAAGTCCGTTTCAAACAGTTTCAAATTAGCTTTCATTCAATTTAC
AAATGCGAATTACTAAAGTTTGAATTATGATTTTGTGCTCGTTAAAAAGA
TAATTTGAAGTGGGATATTATCATATAAATAGTTTACAAATGAAGATGAA
GAAGCATAAATTCAACTGCAGAATCATGCTTTTAGCATAAGTGTTAAAAA
GAAATTTTAAAATTATATATTTGGTATTAATAATGTCTTATTTTTCAGGC
ACAAGTAACGTTGCTGACAAACACATTACAAGCGTTACGTGAAATGTAGG
ACCATTAATAATCATTATTTCGGGACTTTTTTTATAAAATTTGATTAACA
TGATTTCTTTTGTTTTTGTTTTGTAAATATTATACTGTTTTCTTGACAAA
ATCTTTTTTTCTTACAAAAAAATCAACAAGCATACATATAATTTATTATA
ATGATTATGAATTTGAATATTAGTCGCCACATTTTCAAATTTCTGGATAT
AAGTTATCCATTTTTCACTTTTGAAGTTTGATTGCTCTTCTTACTCAAAG
CTTTTTTAACTATTTTCATTAATCTAATCCCCTCAACAGTTTAATTAATT
TAATTTTGATTTTATTCTTCTGAACGGATTTGTTCATTGTTTTTTATTTT
TATGTTAATGTTTACTTTTGAAAATATTGTCTTTTTTTATAAATGATAAT
TAACGAAACTCAATAGCCGCCTATAGCCAACTATTAAGATTTTCTGAAAA
CTTAACGATAATATAGAAATTACTAATCAACATTAAATAGTAATACACAA
GTTTTTTCGATGAACTTTATCTTGTTGAACAGTCTGATAAATATATTTTT
AGTTAAATATTTCAATAGAGAATTAAATTTCTTTACATAATAAAATCTAA
TAAATGAATACAATTTTGCTTCTAATGGGCTCTTCCAGAAAAAAACCATT
CATGGGAAGTGGAGGATATATTGTCCAAGGGTATTGAAAAAACCCTGAAA
AACTGCCATCAGAATTCTGACTCTTATTGCGAAATCCCAACCTTGTTCCC
TGTGCATTATCAGCTTTTTCATTCCTACCATGAACATATAAACGACTGAA
CATCTATCTTTTATTGTCTCTTTGAAGCGAGCTTCGTTGCCGCCTGTATT
TCAAAATTGGTTTGAAAAATCCGACAAATCATGTGTCCTGAATATCAAAA
TTAGAATGTGACCCTCTCTAAAATTATTCAACACTTTTAAGTCGAAATTT
AGAAATATTAGTCGTTTATATGTTCATGTTCCTACTAACAGCGTCAATCA
GTCTATAAATAAACCCTGGGATACACGAGCACGAGATTGATTAAAGAATT
CAGTTTTATTGAAGTAAAACTAAGAAGCTGCTGAAAGCCAGCCAAGATTC
TTAGGTCCTGCGAATCAGAAGATTTGGTAA

Coding sequence (CDS) from alignment at sc0000197:333174..338703-

>TCONS_00014733 ID=TCONS_00014733|Name=TCONS_00014733|organism=Clytia hemisphaerica|type=CDS|length=9603bp|location=Sequence derived from alignment at sc0000197:333174..338703- (Clytia hemisphaerica)
GCACAAGTAACGTTGCTGACAAACACATTACAAGCGTTACGTGAAATGTA
GGGTGAATTAGCTGACTTAGAATTAAAGCATGCGAAGAACTTGGTGAACT
ACGAAAAAAGAAAGTATCCCATTTCAAAAAGAATTTAGCAACCACTGCGC
AACAAGTCGCAAGTGAAAAATTCGAATCACTCTCAGAAACTGCAAAAGGA
GAAATTGGAGGGTCGAATGGCAACAGATGAGGACTTGAAACTTGGAGATC
TTTTACGATATCACCAACGAGATGCTCAGGCAGCAAAAGGATTACTTTAT
CGTCGAATGAGATGTCTGGCCAACTTGGAGAACGCAAACAAGAATTTGGA
TAAAGCGAGAGCAAAGAATAAGGACGTAGCTGCGATTCTTGAACAAAACT
TCAGAGTCGTTGGAAAAACTAAGGGGCAAAAGATGCATCAATGAAATGTG
ATAAGATGACTTCTTTACACAAACGAATGTCAGATATTCTTATCAAAGTT
TCTGGTGGCCTTAGTGTAATGGGGACTAGTGAAAACACCAACCTTGCACC
GATGTTGATGAATATTTCGAATCAGAGAAAAGATTTTACGTCGAATTTCA
TAACAGCTCAGTGTTCGTGGTAAAAATACAAGAGAATTCTTGAAGGGCCT
TGCCAAAGGCATTGCCAAGGGAGTGGATGAAAAAGTTTTACTCTCTGGTC
AAAAGAGAATATTTGGCTACCTTCAAGAAGACAGTGGCAATGCACGAAGT
ATTTTTGACAAGATTGGCTCATCATCCTGTTCTTCGGAATGATCATAATT
TTAGAGTTTTCTTAGAATACAAAGAGGATATGACCAAGGAAGAATTCCAA
AAAATGAAACAAGAACTTGAAGCGCACAAGTAACGTTGCTGACAAACACA
TTACAAGCGTTACGTGAAATGTAGGGTGAATTAGCTGACTTAGAATTAAA
GCATGCGAAGAACTTGGTGAACTACGAAAAAAGAAAGTATCCCATTTCAA
AAAGAATTTAGCAACCACTGCGCAACAAGTCGCAAGTGAAAAATTCGAAT
CACTCTCAGAAACTGCAAAAGGAGAAATTGGAGGGTCGAATGGCAACAGA
TGAGGACTTGAAACTTGGAGATCTTTTACGATATCACCAACGAGATGCTC
AGGCAGCAAAAGGATTACTTTATCGTCGAATGAGATGTCTGGCCAACTTG
GAGAACGCAAACAAGAATTTGGATAAAGCGAGAGCAAAGAATAAGGACGT
AGCTGCGATTCTTGAACAAAACTTCAGAGTCGTTGGAAAAACTAAGGGGC
AAAAGATGCATCAATGAAATGTGATAAGATGACTTCTTTACACAAACGAA
TGTCAGATATTCTTATCAAAGTTTCTGGTGGCCTTAGTGTAATGGGGACT
AGTGAAAACACCAACCTTGCACCGATGTTGATGAATATTTCGAATCAGAG
AAAAGATTTTACGTCGAATTTCATAACAGCTCAGTGTTCGTGGTAAAAAT
ACAAGAGAATTCTTGAAGGGCCTTGCCAAAGGCATTGCCAAGGGAGTGGA
TGAAAAAGTTTTACTCTCTGGTCAAAAGAGAATATTTGGCTACCTTCAAG
AAGACAGTGGCAATGCACGAAGTATTTTTGACAAGATTGGCTCATCATCC
TGTTCTTCGGAATGATCATAATTTTAGAGTTTTCTTAGAATACAAAGAGG
ATATGACCAAGGAAGAATTCCAAAAAATGAAACAAGAACTTGAAGCGCAC
AAGTAACGTTGCTGACAAACACATTACAAGCGTTACGTGAAATGTAGGGT
GAATTAGCTGACTTAGAATTAAAGCATGCGAAGAACTTGGTGAACTACGA
AAAAAGAAAGTATCCCATTTCAAAAAGAATTTAGCAACCACTGCGCAACA
AGTCGCAAGTGAAAAATTCGAATCACTCTCAGAAACTGCAAAAGGAGAAA
TTGGAGGGTCGAATGGCAACAGATGAGGACTTGAAACTTGGAGATCTTTT
ACGATATCACCAACGAGATGCTCAGGCAGCAAAAGGATTACTTTATCGTC
GAATGAGATGTCTGGCCAACTTGGAGAACGCAAACAAGAATTTGGATAAA
GCGAGAGCAAAGAATAAGGACGTAGCTGCGATTCTTGAACAAAACTTCAG
AGTCGTTGGAAAAACTAAGGGGCAAAAGATGCATCAATGAAATGTGATAA
GATGACTTCTTTACACAAACGAATGTCAGATATTCTTATCAAAGTTTCTG
GTGGCCTTAGTGTAATGGGGACTAGTGAAAACACCAACCTTGCACCGATG
TTGATGAATATTTCGAATCAGAGAAAAGATTTTACGTCGAATTTCATAAC
AGCTCAGTGTTCGTGGTAAAAATACAAGAGAATTCTTGAAGGGCCTTGCC
AAAGGCATTGCCAAGGGAGTGGATGAAAAAGTTTTACTCTCTGGTCAAAA
GAGAATATTTGGCTACCTTCAAGAAGACAGTGGCAATGCACGAAGTATTT
TTGACAAGATTGGCTCATCATCCTGTTCTTCGGAATGATCATAATTTTAG
AGTTTTCTTAGAATACAAAGAGGATATGACCAAGGAAGAATTCCAAAAAA
TGAAACAAGAACTTGAAGCGCACAAGTAACGTTGCTGACAAACACATTAC
AAGCGTTACGTGAAATGTAGGGTGAATTAGCTGACTTAGAATTAAAGCAT
GCGAAGAACTTGGTGAACTACGAAAAAAGAAAGTATCCCATTTCAAAAAG
AATTTAGCAACCACTGCGCAACAAGTCGCAAGTGAAAAATTCGAATCACT
CTCAGAAACTGCAAAAGGAGAAATTGGAGGGTCGAATGGCAACAGATGAG
GACTTGAAACTTGGAGATCTTTTACGATATCACCAACGAGATGCTCAGGC
AGCAAAAGGATTACTTTATCGTCGAATGAGATGTCTGGCCAACTTGGAGA
ACGCAAACAAGAATTTGGATAAAGCGAGAGCAAAGAATAAGGACGTAGCT
GCGATTCTTGAACAAAACTTCAGAGTCGTTGGAAAAACTAAGGGGCAAAA
GATGCATCAATGAAATGTGATAAGATGACTTCTTTACACAAACGAATGTC
AGATATTCTTATCAAAGTTTCTGGTGGCCTTAGTGTAATGGGGACTAGTG
AAAACACCAACCTTGCACCGATGTTGATGAATATTTCGAATCAGAGAAAA
GATTTTACGTCGAATTTCATAACAGCTCAGTGTTCGTGGTAAAAATACAA
GAGAATTCTTGAAGGGCCTTGCCAAAGGCATTGCCAAGGGAGTGGATGAA
AAAGTTTTACTCTCTGGTCAAAAGAGAATATTTGGCTACCTTCAAGAAGA
CAGTGGCAATGCACGAAGTATTTTTGACAAGATTGGCTCATCATCCTGTT
CTTCGGAATGATCATAATTTTAGAGTTTTCTTAGAATACAAAGAGGATAT
GACCAAGGAAGAATTCCAAAAAATGAAACAAGAACTTGAAGCGCACAAGT
AACGTTGCTGACAAACACATTACAAGCGTTACGTGAAATGTAGGGTGAAT
TAGCTGACTTAGAATTAAAGCATGCGAAGAACTTGGTGAACTACGAAAAA
AGAAAGTATCCCATTTCAAAAAGAATTTAGCAACCACTGCGCAACAAGTC
GCAAGTGAAAAATTCGAATCACTCTCAGAAACTGCAAAAGGAGAAATTGG
AGGGTCGAATGGCAACAGATGAGGACTTGAAACTTGGAGATCTTTTACGA
TATCACCAACGAGATGCTCAGGCAGCAAAAGGATTACTTTATCGTCGAAT
GAGATGTCTGGCCAACTTGGAGAACGCAAACAAGAATTTGGATAAAGCGA
GAGCAAAGAATAAGGACGTAGCTGCGATTCTTGAACAAAACTTCAGAGTC
GTTGGAAAAACTAAGGGGCAAAAGATGCATCAATGAAATGTGATAAGATG
ACTTCTTTACACAAACGAATGTCAGATATTCTTATCAAAGTTTCTGGTGG
CCTTAGTGTAATGGGGACTAGTGAAAACACCAACCTTGCACCGATGTTGA
TGAATATTTCGAATCAGAGAAAAGATTTTACGTCGAATTTCATAACAGCT
CAGTGTTCGTGGTAAAAATACAAGAGAATTCTTGAAGGGCCTTGCCAAAG
GCATTGCCAAGGGAGTGGATGAAAAAGTTTTACTCTCTGGTCAAAAGAGA
ATATTTGGCTACCTTCAAGAAGACAGTGGCAATGCACGAAGTATTTTTGA
CAAGATTGGCTCATCATCCTGTTCTTCGGAATGATCATAATTTTAGAGTT
TTCTTAGAATACAAAGAGGATATGACCAAGGAAGAATTCCAAAAAATGAA
ACAAGAACTTGAAGCGCACAAGTAACGTTGCTGACAAACACATTACAAGC
GTTACGTGAAATGTAGGGTGAATTAGCTGACTTAGAATTAAAGCATGCGA
AGAACTTGGTGAACTACGAAAAAAGAAAGTATCCCATTTCAAAAAGAATT
TAGCAACCACTGCGCAACAAGTCGCAAGTGAAAAATTCGAATCACTCTCA
GAAACTGCAAAAGGAGAAATTGGAGGGTCGAATGGCAACAGATGAGGACT
TGAAACTTGGAGATCTTTTACGATATCACCAACGAGATGCTCAGGCAGCA
AAAGGATTACTTTATCGTCGAATGAGATGTCTGGCCAACTTGGAGAACGC
AAACAAGAATTTGGATAAAGCGAGAGCAAAGAATAAGGACGTAGCTGCGA
TTCTTGAACAAAACTTCAGAGTCGTTGGAAAAACTAAGGGGCAAAAGATG
CATCAATGAAATGTGATAAGATGACTTCTTTACACAAACGAATGTCAGAT
ATTCTTATCAAAGTTTCTGGTGGCCTTAGTGTAATGGGGACTAGTGAAAA
CACCAACCTTGCACCGATGTTGATGAATATTTCGAATCAGAGAAAAGATT
TTACGTCGAATTTCATAACAGCTCAGTGTTCGTGGTAAAAATACAAGAGA
ATTCTTGAAGGGCCTTGCCAAAGGCATTGCCAAGGGAGTGGATGAAAAAG
TTTTACTCTCTGGTCAAAAGAGAATATTTGGCTACCTTCAAGAAGACAGT
GGCAATGCACGAAGTATTTTTGACAAGATTGGCTCATCATCCTGTTCTTC
GGAATGATCATAATTTTAGAGTTTTCTTAGAATACAAAGAGGATATGACC
AAGGAAGAATTCCAAAAAATGAAACAAGAACTTGAAGCGCACAAGTAACG
TTGCTGACAAACACATTACAAGCGTTACGTGAAATGTAGGGTGAATTAGC
TGACTTAGAATTAAAGCATGCGAAGAACTTGGTGAACTACGAAAAAAGAA
AGTATCCCATTTCAAAAAGAATTTAGCAACCACTGCGCAACAAGTCGCAA
GTGAAAAATTCGAATCACTCTCAGAAACTGCAAAAGGAGAAATTGGAGGG
TCGAATGGCAACAGATGAGGACTTGAAACTTGGAGATCTTTTACGATATC
ACCAACGAGATGCTCAGGCAGCAAAAGGATTACTTTATCGTCGAATGAGA
TGTCTGGCCAACTTGGAGAACGCAAACAAGAATTTGGATAAAGCGAGAGC
AAAGAATAAGGACGTAGCTGCGATTCTTGAACAAAACTTCAGAGTCGTTG
GAAAAACTAAGGGGCAAAAGATGCATCAATGAAATGTGATAAGATGACTT
CTTTACACAAACGAATGTCAGATATTCTTATCAAAGTTTCTGGTGGCCTT
AGTGTAATGGGGACTAGTGAAAACACCAACCTTGCACCGATGTTGATGAA
TATTTCGAATCAGAGAAAAGATTTTACGTCGAATTTCATAACAGCTCAGT
GTTCGTGGTAAAAATACAAGAGAATTCTTGAAGGGCCTTGCCAAAGGCAT
TGCCAAGGGAGTGGATGAAAAAGTTTTACTCTCTGGTCAAAAGAGAATAT
TTGGCTACCTTCAAGAAGACAGTGGCAATGCACGAAGTATTTTTGACAAG
ATTGGCTCATCATCCTGTTCTTCGGAATGATCATAATTTTAGAGTTTTCT
TAGAATACAAAGAGGATATGACCAAGGAAGAATTCCAAAAAATGAAACAA
GAACTTGAAGCGCACAAGTAACGTTGCTGACAAACACATTACAAGCGTTA
CGTGAAATGTAGGGTGAATTAGCTGACTTAGAATTAAAGCATGCGAAGAA
CTTGGTGAACTACGAAAAAAGAAAGTATCCCATTTCAAAAAGAATTTAGC
AACCACTGCGCAACAAGTCGCAAGTGAAAAATTCGAATCACTCTCAGAAA
CTGCAAAAGGAGAAATTGGAGGGTCGAATGGCAACAGATGAGGACTTGAA
ACTTGGAGATCTTTTACGATATCACCAACGAGATGCTCAGGCAGCAAAAG
GATTACTTTATCGTCGAATGAGATGTCTGGCCAACTTGGAGAACGCAAAC
AAGAATTTGGATAAAGCGAGAGCAAAGAATAAGGACGTAGCTGCGATTCT
TGAACAAAACTTCAGAGTCGTTGGAAAAACTAAGGGGCAAAAGATGCATC
AATGAAATGTGATAAGATGACTTCTTTACACAAACGAATGTCAGATATTC
TTATCAAAGTTTCTGGTGGCCTTAGTGTAATGGGGACTAGTGAAAACACC
AACCTTGCACCGATGTTGATGAATATTTCGAATCAGAGAAAAGATTTTAC
GTCGAATTTCATAACAGCTCAGTGTTCGTGGTAAAAATACAAGAGAATTC
TTGAAGGGCCTTGCCAAAGGCATTGCCAAGGGAGTGGATGAAAAAGTTTT
ACTCTCTGGTCAAAAGAGAATATTTGGCTACCTTCAAGAAGACAGTGGCA
ATGCACGAAGTATTTTTGACAAGATTGGCTCATCATCCTGTTCTTCGGAA
TGATCATAATTTTAGAGTTTTCTTAGAATACAAAGAGGATATGACCAAGG
AAGAATTCCAAAAAATGAAACAAGAACTTGAAGCGCACAAGTAACGTTGC
TGACAAACACATTACAAGCGTTACGTGAAATGTAGGGTGAATTAGCTGAC
TTAGAATTAAAGCATGCGAAGAACTTGGTGAACTACGAAAAAAGAAAGTA
TCCCATTTCAAAAAGAATTTAGCAACCACTGCGCAACAAGTCGCAAGTGA
AAAATTCGAATCACTCTCAGAAACTGCAAAAGGAGAAATTGGAGGGTCGA
ATGGCAACAGATGAGGACTTGAAACTTGGAGATCTTTTACGATATCACCA
ACGAGATGCTCAGGCAGCAAAAGGATTACTTTATCGTCGAATGAGATGTC
TGGCCAACTTGGAGAACGCAAACAAGAATTTGGATAAAGCGAGAGCAAAG
AATAAGGACGTAGCTGCGATTCTTGAACAAAACTTCAGAGTCGTTGGAAA
AACTAAGGGGCAAAAGATGCATCAATGAAATGTGATAAGATGACTTCTTT
ACACAAACGAATGTCAGATATTCTTATCAAAGTTTCTGGTGGCCTTAGTG
TAATGGGGACTAGTGAAAACACCAACCTTGCACCGATGTTGATGAATATT
TCGAATCAGAGAAAAGATTTTACGTCGAATTTCATAACAGCTCAGTGTTC
GTGGTAAAAATACAAGAGAATTCTTGAAGGGCCTTGCCAAAGGCATTGCC
AAGGGAGTGGATGAAAAAGTTTTACTCTCTGGTCAAAAGAGAATATTTGG
CTACCTTCAAGAAGACAGTGGCAATGCACGAAGTATTTTTGACAAGATTG
GCTCATCATCCTGTTCTTCGGAATGATCATAATTTTAGAGTTTTCTTAGA
ATACAAAGAGGATATGACCAAGGAAGAATTCCAAAAAATGAAACAAGAAC
TTGAAGCGCACAAGTAACGTTGCTGACAAACACATTACAAGCGTTACGTG
AAATGTAGGGTGAATTAGCTGACTTAGAATTAAAGCATGCGAAGAACTTG
GTGAACTACGAAAAAAGAAAGTATCCCATTTCAAAAAGAATTTAGCAACC
ACTGCGCAACAAGTCGCAAGTGAAAAATTCGAATCACTCTCAGAAACTGC
AAAAGGAGAAATTGGAGGGTCGAATGGCAACAGATGAGGACTTGAAACTT
GGAGATCTTTTACGATATCACCAACGAGATGCTCAGGCAGCAAAAGGATT
ACTTTATCGTCGAATGAGATGTCTGGCCAACTTGGAGAACGCAAACAAGA
ATTTGGATAAAGCGAGAGCAAAGAATAAGGACGTAGCTGCGATTCTTGAA
CAAAACTTCAGAGTCGTTGGAAAAACTAAGGGGCAAAAGATGCATCAATG
AAATGTGATAAGATGACTTCTTTACACAAACGAATGTCAGATATTCTTAT
CAAAGTTTCTGGTGGCCTTAGTGTAATGGGGACTAGTGAAAACACCAACC
TTGCACCGATGTTGATGAATATTTCGAATCAGAGAAAAGATTTTACGTCG
AATTTCATAACAGCTCAGTGTTCGTGGTAAAAATACAAGAGAATTCTTGA
AGGGCCTTGCCAAAGGCATTGCCAAGGGAGTGGATGAAAAAGTTTTACTC
TCTGGTCAAAAGAGAATATTTGGCTACCTTCAAGAAGACAGTGGCAATGC
ACGAAGTATTTTTGACAAGATTGGCTCATCATCCTGTTCTTCGGAATGAT
CATAATTTTAGAGTTTTCTTAGAATACAAAGAGGATATGACCAAGGAAGA
ATTCCAAAAAATGAAACAAGAACTTGAAGCGCACAAGTAACGTTGCTGAC
AAACACATTACAAGCGTTACGTGAAATGTAGGGTGAATTAGCTGACTTAG
AATTAAAGCATGCGAAGAACTTGGTGAACTACGAAAAAAGAAAGTATCCC
ATTTCAAAAAGAATTTAGCAACCACTGCGCAACAAGTCGCAAGTGAAAAA
TTCGAATCACTCTCAGAAACTGCAAAAGGAGAAATTGGAGGGTCGAATGG
CAACAGATGAGGACTTGAAACTTGGAGATCTTTTACGATATCACCAACGA
GATGCTCAGGCAGCAAAAGGATTACTTTATCGTCGAATGAGATGTCTGGC
CAACTTGGAGAACGCAAACAAGAATTTGGATAAAGCGAGAGCAAAGAATA
AGGACGTAGCTGCGATTCTTGAACAAAACTTCAGAGTCGTTGGAAAAACT
AAGGGGCAAAAGATGCATCAATGAAATGTGATAAGATGACTTCTTTACAC
AAACGAATGTCAGATATTCTTATCAAAGTTTCTGGTGGCCTTAGTGTAAT
GGGGACTAGTGAAAACACCAACCTTGCACCGATGTTGATGAATATTTCGA
ATCAGAGAAAAGATTTTACGTCGAATTTCATAACAGCTCAGTGTTCGTGG
TAAAAATACAAGAGAATTCTTGAAGGGCCTTGCCAAAGGCATTGCCAAGG
GAGTGGATGAAAAAGTTTTACTCTCTGGTCAAAAGAGAATATTTGGCTAC
CTTCAAGAAGACAGTGGCAATGCACGAAGTATTTTTGACAAGATTGGCTC
ATCATCCTGTTCTTCGGAATGATCATAATTTTAGAGTTTTCTTAGAATAC
AAAGAGGATATGACCAAGGAAGAATTCCAAAAAATGAAACAAGAACTTGA
AGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008241XLOC_008241Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014733-proteinTCONS_00014733-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014733-exon-sc0000197-1575043694:338568..338703TCONS_00014733-exon-sc0000197-1575043694:338568..338703Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:338205..338328TCONS_00014733-exon-sc0000197-1575043694:338205..338328Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:337479..337577TCONS_00014733-exon-sc0000197-1575043694:337479..337577Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:336953..337008TCONS_00014733-exon-sc0000197-1575043694:336953..337008Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:336352..336477TCONS_00014733-exon-sc0000197-1575043694:336352..336477Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:336152..336191TCONS_00014733-exon-sc0000197-1575043694:336152..336191Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:335769..335951TCONS_00014733-exon-sc0000197-1575043694:335769..335951Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:335378..335441TCONS_00014733-exon-sc0000197-1575043694:335378..335441Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:335112..335161TCONS_00014733-exon-sc0000197-1575043694:335112..335161Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:334790..334825TCONS_00014733-exon-sc0000197-1575043694:334790..334825Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1575043694:333174..334355TCONS_00014733-exon-sc0000197-1575043694:333174..334355Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:338568..338703TCONS_00014733-exon-sc0000197-1510915933:338568..338703Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:338205..338328TCONS_00014733-exon-sc0000197-1510915933:338205..338328Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:337479..337577TCONS_00014733-exon-sc0000197-1510915933:337479..337577Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:336953..337008TCONS_00014733-exon-sc0000197-1510915933:336953..337008Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:336352..336477TCONS_00014733-exon-sc0000197-1510915933:336352..336477Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:336152..336191TCONS_00014733-exon-sc0000197-1510915933:336152..336191Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:335769..335951TCONS_00014733-exon-sc0000197-1510915933:335769..335951Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:335378..335441TCONS_00014733-exon-sc0000197-1510915933:335378..335441Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:335112..335161TCONS_00014733-exon-sc0000197-1510915933:335112..335161Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:334790..334825TCONS_00014733-exon-sc0000197-1510915933:334790..334825Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1510915933:333174..334355TCONS_00014733-exon-sc0000197-1510915933:333174..334355Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:338568..338703TCONS_00014733-exon-sc0000197-1491911889:338568..338703Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:338205..338328TCONS_00014733-exon-sc0000197-1491911889:338205..338328Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:337479..337577TCONS_00014733-exon-sc0000197-1491911889:337479..337577Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:336953..337008TCONS_00014733-exon-sc0000197-1491911889:336953..337008Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:336352..336477TCONS_00014733-exon-sc0000197-1491911889:336352..336477Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:336152..336191TCONS_00014733-exon-sc0000197-1491911889:336152..336191Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:335769..335951TCONS_00014733-exon-sc0000197-1491911889:335769..335951Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:335378..335441TCONS_00014733-exon-sc0000197-1491911889:335378..335441Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:335112..335161TCONS_00014733-exon-sc0000197-1491911889:335112..335161Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:334790..334825TCONS_00014733-exon-sc0000197-1491911889:334790..334825Clytia hemisphaericaexon
TCONS_00014733-exon-sc0000197-1491911889:333174..334355TCONS_00014733-exon-sc0000197-1491911889:333174..334355Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000197supercontigsc0000197:333174..338703 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
84.9984	78.8312	104.503	115.213	76.6501	59.5767	90.5826	90.2934	97.1765	97.8424	93.0271	70.1927	70.2735	63.1696	83.5313	98.2737	68.1666	66.7991	47.6753	58.1677	57.4822	60.3626	65.665	67.3976	44.2306	49.0093	67.6697	56.689	86.7037	78.0028
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015404Vps5_C
IPR001683Phox
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
Blast
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BLAST of TCONS_00014733 vs. Swiss-Prot (Human)
Match: SNX32 (Sorting nexin-32 OS=Homo sapiens GN=SNX32 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.460e-103
Identity = 167/294 (56.80%), Postives = 219/294 (74.49%), Query Frame = 3 
Query:   81 GETTMTKEEFQKMKQELEAEYLATFKKTVAMHEVFLTRLAHHPVLRNDHNFRVFLEYKEDLSVRGKNTREFLKGLAKGIAKGVDEKVL--LSGQKDVDEYFESEKRFYVEFHNRAKDASMKCDKMTSLHKRMSDILIKVSGGLSVMGTSENTNLAPFLNKTSESLEKLRKLEGRMATDEDLKLGDLLRYHQRDAQAAKGLLYRRMRCLANLENANKNLDKARAKNKDXXXXXXXXXXXSEKFESLSETAKGELGELRKKKVSHFKKNLGELADLELKHAKAQVTLLTNTLQALR 956
            G++++T+EEF KMKQELEAEYLA FKKTVAMHEVFL RLA HP LR DHNF VFLEY +DLSVRGKN +E L G  + I K  DE ++  +SG K+VD++FE E+ F +E+H R +DA ++ D++   HK ++D  I +S  LS +GT E   L     K +E  E+LRKLEGR+A+DEDLKL D+LRY+ RD+QAAK LLYRR+R LA+ ENANK LDKAR +N++V  A + QQ+  ++FE LS++AK EL + + ++VS F+KNL ELA+LELKHAKA   +L NTL AL+
Sbjct:  107 GDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFLQRLAAHPTLRRDHNFFVFLEYGQDLSVRGKNRKELLGGFLRNIVKSADEALITGMSGLKEVDDFFEHERTFLLEYHTRIRDACLRADRVMRAHKCLADDYIPISAALSSLGTQEVNQLRTSFLKLAELFERLRKLEGRVASDEDLKLSDMLRYYMRDSQAAKDLLYRRLRALADYENANKALDKARTRNREVRPAESHQQLCCQRFERLSDSAKQELMDFKSRRVSSFRKNLIELAELELKHAKASTLILRNTLVALK 400
The following BLAST results are available for this feature:
BLAST of TCONS_00014733 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX322.460e-10356.80Sorting nexin-32 OS=Homo sapiens GN=SNX32 PE=1 SV=... [more]
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