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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014757 ID=TCONS_00014757|Name=TCONS_00014757|organism=Clytia hemisphaerica|type=transcript|length=720bp
CACAGCTCCTACTTTCAACATCAACAGTTCCGTGGTTTCACCTACTAAAG
TAAATAGTCCTGTTGCTGTGCAACCTAGTTCACCTTTGGTCACGAGTGCT
AAAACAcaagacattgatttttctgatATGCCAGTTTTTGACGTCAACCA
ATTATCTGCACTTGAGATTCATAGTAAACCAATCGAAGGTGAGCCGCAAC
CacaaggagaagaagaagacaTTCCAGAGTTGAGTTTcgctgaaaaaatg
aaaatgttcagTGCTGCAAAGAACCAAGCAAAACTTGCACCGGCCGCTTC
AAGTCAAACccaaaccaaacaaaatccTCCGCCAACTGCACAAAAGCCAG
CACCGCCAACAGTGCAAGCCAAACCAGAAACAGCCCCAAAGCCGCCTAAA
ACGAATCCGAAACCAATTATCTCTGTTACACAAGAACCCGATTTTCCTGA
TTTCGATATGCCGCCACCTCCACCCTCGAGCATGATCGACTTTGATTTAC
CGCCTCCACCACCAgatttcatttttgatgactttaTGACTCCGCCAAAG
AAAGTTAGTCTCCAAgataaattgaaagaattggAGTCCAGATACGAAAT
TGAAGATCAATCAACCAGTTCGGTTTCCACTGTGGGAGCGAATCAAGTTG
TCATGAGTAAAAGTGATCCAAAATTCGCTGTCAAATTCCAATAGAATGAA
CTgattatttggaaaatttg Run BLAST on NCBI protein sequence of TCONS_00014757-protein >TCONS_00014757-protein ID=TCONS_00014757-protein|Name=TCONS_00014757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
TAPTFNINSSVVSPTKVNSPVAVQPSSPLVTSAKTQDIDFSDMPVFDVNQ
LSALEIHSKPIEGEPQPQGEEEDIPELSFAEKMKMFSAAKNQAKLAPAAS
SQTQTKQNPPPTAQKPAPPTVQAKPETAPKPPKTNPKPIISVTQEPDFPD
FDMPPPPPSSMIDFDLPPPPPDFIFDDFMTPPKKVSLQDKLKELESRYEI
EDQSTSSVSTVGANQVVMSKSDPKFAVKFQ Run BLAST on NCBI transcript from alignment at sc0000197:406618..407337 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014757 ID=TCONS_00014757|Name=TCONS_00014757|organism=Clytia hemisphaerica|type=transcript|length=720bp|location=Sequence derived from alignment at sc0000197:406618..407337 (Clytia hemisphaerica)
caaattttccaaataatcAGTTCATTCTATTGGAATTTGACAGCGAATTT
TGGATCACTTTTACTCATGACAACTTGATTCGCTCCCACAGTGGAAACCG
AACTGGTTGATTGATCTTCAATTTCGTATCTGGACTccaattctttcaat
ttatcTTGGAGACTAACTTTCTTTGGCGGAGTCAtaaagtcatcaaaaat
gaaatcTGGTGGTGGAGGCGGTAAATCAAAGTCGATCATGCTCGAGGGTG
GAGGTGGCGGCATATCGAAATCAGGAAAATCGGGTTCTTGTGTAACAGAG
ATAATTGGTTTCGGATTCGTTTTAGGCGGCTTTGGGGCTGTTTCTGGTTT
GGCTTGCACTGTTGGCGGTGCTGGCTTTTGTGCAGTTGGCGGAggatttt
gtttggtttggGTTTGACTTGAAGCGGCCGGTGCAAGTTTTGCTTGGTTC
TTTGCAGCActgaacattttcattttttcagcgAAACTCAACTCTGGAAt
gtcttcttcttctccttgtGGTTGCGGCTCACCTTCGATTGGTTTACTAT
GAATCTCAAGTGCAGATAATTGGTTGACGTCAAAAACTGGCATatcagaa
aaatcaatgtcttgTGTTTTAGCACTCGTGACCAAAGGTGAACTAGGTTG
CACAGCAACAGGACTATTTACTTTAGTAGGTGAAACCACGGAACTGTTGA
TGTTGAAAGTAGGAGCTGTG Coding sequence (CDS) from alignment at sc0000197:406618..407337 >TCONS_00014757 ID=TCONS_00014757|Name=TCONS_00014757|organism=Clytia hemisphaerica|type=CDS|length=693bp|location=Sequence derived from alignment at sc0000197:406618..407337 (Clytia hemisphaerica)
CTATTGGAATTTGACAGCGAATTTTGGATCACTTTTACTCATGACAACTT
GATTCGCTCCCACAGTGGAAACCGAACTGGTTGATTGATCTTCAATTTCG
TATCTGGACTccaattctttcaatttatcTTGGAGACTAACTTTCTTTGG
CGGAGTCAtaaagtcatcaaaaatgaaatcTGGTGGTGGAGGCGGTAAAT
CAAAGTCGATCATGCTCGAGGGTGGAGGTGGCGGCATATCGAAATCAGGA
AAATCGGGTTCTTGTGTAACAGAGATAATTGGTTTCGGATTCGTTTTAGG
CGGCTTTGGGGCTGTTTCTGGTTTGGCTTGCACTGTTGGCGGTGCTGGCT
TTTGTGCAGTTGGCGGAggattttgtttggtttggGTTTGACTTGAAGCG
GCCGGTGCAAGTTTTGCTTGGTTCTTTGCAGCActgaacattttcatttt
ttcagcgAAACTCAACTCTGGAAtgtcttcttcttctccttgtGGTTGCG
GCTCACCTTCGATTGGTTTACTATGAATCTCAAGTGCAGATAATTGGTTG
ACGTCAAAAACTGGCATatcagaaaaatcaatgtcttgTGTTTTAGCACT
CGTGACCAAAGGTGAACTAGGTTGCACAGCAACAGGACTATTTACTTTAG
TAGGTGAAACCACGGAACTGTTGATGTTGAAAGTAGGAGCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014757-exon-sc0000197-1491911889:406618..407337 | TCONS_00014757-exon-sc0000197-1491911889:406618..407337 | Clytia hemisphaerica | exon |
| TCONS_00014757-exon-sc0000197-1510915933:406618..407337 | TCONS_00014757-exon-sc0000197-1510915933:406618..407337 | Clytia hemisphaerica | exon |
| TCONS_00014757-exon-sc0000197-1575043694:406618..407337 | TCONS_00014757-exon-sc0000197-1575043694:406618..407337 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:406618..407337 . |
Blast
The following BLAST results are available for this feature:
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