TCONS_00014763 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00014763
Unique Name	TCONS_00014763
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	4677

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000198:156867..173631+

transcript sequence

>TCONS_00014763 ID=TCONS_00014763|Name=TCONS_00014763|organism=Clytia hemisphaerica|type=transcript|length=4677bp
GTTTTAGAACTAATTGAGAAGATCATACTAGATAACATAACATAATAACA
ATACAAATTCCAACATGGCTACAGCAGACCAACAACGATCACTTAAAGAT
GCAATGGAAAGAGCTAAACAgatTGCTGCAAAACTTCAAGCGCAGCAGGC
AGCAGGACTTCCGTTAGAAGatgACCAGTCAGAATCACCAATGAATAAAA
TGGCATTTGTTCCTCCTATGGGTGGACCAATTGACCCATCGGATCCAAAA
TCCATAGCTCAACAAGTAGCTAATAGTCTTGTGCAAAGGGCTGGTTTTGG
TTCAATGCTCGTGGAAGAAGTAATGATTCCAAATAAACTTGTTGGGTTAG
TTATTGGTCGTGGTGGTGAAATGATCAACAAACTTCAATCAGAATCAGGA
GCAAAGATACAAGTTGCTACTGATCCACCACCAGAGATAGCAGCGATGCA
AACAGAACGTCAAGTCACCATCACAGGAATGGCTGATAATGTCAACAAAG
CCAAAAGTCTTATTGACGAGATTCGATCCGAAGGAAAAGTTCCTGAAAGA
CTTCTTAgtggaggaggaggaggagccAGCGAATATTCAACGGAAATGTT
GATTCCTTCAACAAAAGTTGGATTAGTTATCGGAAAAGGTGGAGAAACGA
TCAAAAGTCTCCAGGAACGAGCTGGTTGTAAAATGGTCCTCTTCCAAGAT
GGAGAATATCAACAGTCCAACGAAAAACCCTTACGCATTAGTGGAGAACA
CAACAAAGTCATGTATGGTAAACAATTAGTTCAAGACTTACTCACTCAAA
AAGAACTTGAGGCTATGGGAAAAGACTCAAATCAAGGGATGCAAAAGACC
CAAGATGGACACATTTATGAAGAGTTTCAAGTCCCTCGTGAAGCGGTTGG
TTTTGTCATCGGCACCAGAGGTTCAAGCATTAACAACATACAACAACAGA
CAGGATGCAAAGTTCAATTCAAAAATGAAATGGAAGGAGATTTCAAGATC
GCCATGTTGAATGGAACACCACAACAAGTACAGGCTGCAAAAGATGCTCT
CGTCGAATGCATACAGAGCCATTCTGAGAGGAAGAATGacggtggtggtg
gtggtggtggtggcaGAAATCAAAGTTGGGGTGGTAATCGAGGAGGTGGA
TGGAATGGTCCTGATGGGCGTAATGGAGGGCCAAGAGGTTATCGTGATCA
AGGGCGGAATACTGGTGGTGGGCGCCATCAACAATTACCACCCGGTCATA
AACACGTCTGTGTTGACGTGCCTTCAAATAAATGTGGTCTTATCATTGGT
AAAGGTGGCGAAACTTTGAAATTCATCCACCAAGATACCAAAGTCTTTAT
CGAGATTGAACGAAATTCACCTCCAGATGCACCAACACGAGTTTTCCATC
TCAAAGGTACGGATGAAATGATCGAAATGGCGCTCCACGAAATGAGGGAT
AAGATCAATGATCAGAACATCTGCGCCAGACCATTCATGCCACAAGGAGG
CGGACCTGGCTGGGGTGGCCCAGGAGGTCCTGGGGGACCTGGAGGATGGG
GTAACCAAGGTTGGAATCAAGGAGGAGGCTGGAACCAGGGTGGTGGTTGG
AATCAACCCCAAGGAGGATGGGGACAAGGTGGATGGAACCAAGGAGGATG
GAATCAACAGCAAGGAGGATGGGGGCAACCTCAACAAGGAGGATGGGGAC
AACAACCCTACCAACAGCAGCAATGGGGACAGCAATCGAGCGCTCCCAAC
ACTTCAACGACTACCACCACACCCACAGCCAACCCAGCAACAGGACAACC
CGATTACAGTGCAGCATGGGCGCAATATTATCAACAACAGCAGATGTATT
ACCAACAATATCAATCTACCGCCGCCTCAAGCTCAACTACAACGACCACG
ACCGCCTCATCTGCTTCAGGTGGAGCTCAAAGCCAATCGATGGAAGAGTA
CCAGAAGAAACTAGCCGAGTATTACAAGCAATACGGACAAGGGGAGGCTG
CCAAACCGGAAAAATAAACGGGAATGTGAAGTGATTGAATGGGAACTGTC
GAAAAAGATATTATGAAGTTCATTCCACTGTATTATGCTGGTGTATTATA
CTACTATCTACTGTTATATTGACTGCATTGATTCCACACTGTTATTACAT
ACATATTACATATGATATTATGTCTGATATTACATGTGTTTCTATATTAT
CCTGTTACACTGCATTGTATGCTATTATAAAACTCATTACGCAGGAGGTT
TGCTGGATCATGCTATGGTGGTATTATGTGTATATAACTTTATGATCTCA
TTTTTTAAAGTAATATTTTGACCCAGCGGGTCGAAATATCGAAGGATTTT
TACTTTTACTACATattaaaatgagaaaattttaaacattgatttttcaa
atatattttattctttctcttttttggaaatgaaaacCAAAACctattca
aaatttacaaacaTTGGAGAACTTAGCTTCGATCTTTTGAATCCCTCTTT
TTACTGTGATCCTGCTATCTTGAAAACCTCTCTCGCTTGTAAAATTGGGC
TTGGTTTTCATTTTCCATATTTTGTGTAAGCTCGTTCTAAAGGAATtctg
ttcttaatttcttttGCTACAGAATGACTGGTAAAATTGTGAGGCTGCAA
AGGTGAAATGGTTtaagctttcaaaaaaattaactcgccaaataaaatgg
taacgGTATTACATTTTGAACTGAAAATTTACAAACTGTATTTGCTGAGA
GGTTAAACAAGGATGGCACTTCTTAAAAAGAAGTCTTGTTTTGTCATCTA
CATATCAGaggaaaaatttgaattccGGCCTTCCGATTCTTTACATTGAA
GAGGCTTCTAATCTAATCTAATTCTAATAATTTCCAAGCTGAAAACAAGT
AATGAATAATAACCCTGAGAGTGATAACTTATTAGTGCGATGGAAATCAC
TTATTTTTATCTTCTTCTTAGGCTTCCTTGTTTAACCTCGCATCTAAAAT
CTGTTGATTGTTATCCAAAACATTTGCTCTGTCCTATTTCACCTGCACGA
TAATTTTGAATTGCTAGTCATTACCCTCACACCAAGTATTATagtgcatc
tttttgaaaatgattctTTAGTATTCCCTAATTATTATCACCTAGTTCGC
ATTTGAAATTCgcattatcatttttcttttgaaaatgattcTTCGGTGTT
GccttattatttttcatttttaacgtTGAATGACCTTATTGAATTGTCTA
TGTTGTGTGTTGTTGTTTGTGTTTATTTATTTGAACGAGAAAGTAACATT
GAGCAGGAACTGTGTATTACAACGCTGGTCGGGCAATATGTGTGCTACGT
CTTACTTTGGGATTACTGGATTTCCTTCATCTTGTCTACTGGCTTGCCTT
GCACATCTACAACGTATGATAACTTAGACGGTTTATTTGTTGTTACCATC
AAACAGCCTTTATATAGTTGATGTTTATATTGAAAGTGTAATTGGTAAGT
ATATTATTTGCTTCACTTTTTATGTCCGTACACTTCGAGGTTCTGTAATT
TCTACCGCCCATTGTAGATTGCAGTTATTGgtttaaataatgttttaatG
ATTctggtatttttgaaatttcacagATGATCAACTTGTTACAGAATTTT
CAGACTACAACCAAATATGTATTCTCGTTTTGAAGAGTTAATATCAATCA
CGCACAATGCGTTTGTAAGAACAGTACAAGGTGTTTTTAAGTGTTTTTGG
ATGATAGGATGTAGTCATCCATACAGTACGTACGCTAAATTTTCCAATTA
TTTGACACTCCttttgtacgcagagaacattAAACTGACGACATGAAAAC
AATAgagtacgcttttgctaaaaaGCTAACCTATAGGACTCTCTCTCTCT
ACTTAgtaaatgggctcttccagaaaatgtccttATATGGGGGGTGGAGA
ATATAATGTCCGTGGGGTAGcggaaaatcatcaaaatttgcttgTATGGG
GGTAAATTTTCTCTGTCccggggtaatttgggttgtccggggggtcaact
gatgcttgtccggggggtgaAACCTGTTGCCCGGGAGCAAAagtcactga
aaattgttatatcctccactcccccctgatattcattttttttctggaaa
agcccaatactaTTCTTACAAGTGCACACTTGTGTACAGATTTATTTCAG
GATTATGACTGCGTCATGAGCAGCTGACAAACGATCGTTGGAAAGACATC
GAAATCAAACTTATTTCATAATATATgtactctttaactcgaacaagttt
tatcgtcccttcagttaacaatgccttatacatgttttttggacctaccc
cggtggaggtcctataaattaacctgtgtttgttcgtccgttcgtccgtc
cgttagtctgttaccaacttttctcaggattgaatcataggaatcttttg
atttttggtacaaaggtgcaaaatggtggtggccaaaatgtgacggagcc
cgattttcgaaaaaaaaattttttgggccaatttgggctaaaaaacgggt
tttttagattttgtgaaaaattgggtcattgattttttctgattttttgt
atgaaagtagggtaccatcataggtaaaagatggctcaagcagatttttg
caaaaaaattttgttggctcaaaaaac

Run BLAST on NCBI

transcript from alignment at sc0000198:156867..173631+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00014763 ID=TCONS_00014763|Name=TCONS_00014763|organism=Clytia hemisphaerica|type=transcript|length=16765bp|location=Sequence derived from alignment at sc0000198:156867..173631+ (Clytia hemisphaerica)
GTTTTAGAACTAATTGAGAAGATCATACTAGATAACATAACATAATAACA
ATACAAATTCCAACATGGCTACAGCAGACCAACAACGATCACTTAAAGAT
GCAATGGAAAGAGCTAAACAggtgtatattttttatttaaatctgAAATC
CattgaaaagttaaactaaGCCTAAAGATAATATAATTTTGCATTGTGAT
CTATTcactgtgttttttttcttctagatTGCTGCAAAACTTCAAGCGCA
GCAGGCAGCAGGACTTCCGTTAGAAGGTATGCTTAAATTCTATCCAAATG
ATCAAATGAAGCAAAATACACAAGGTCGCATTCTTTATTTAAACCCTAAT
TAAAAGTGAGCTTAGTAACCCTAGTAAAGTTGAAAACATCTCTCGTAGAa
gtattcaaatttttactggTATATGTAAGATTGTGACATCTGGTcaccta
gaagataagaacaccaATTTCTAAAAAGTGCTTTTCAAACTGATTTTGAA
TACAGGGTGTCTTAAAAAGTCTTGTGTCAGACCACTTCTATAAGTAGACA
AGTTTTGGTGTATGACAGTTTTTTTTGAATGCAATATTaaataattaaaa
cttgattATTTACAAATCACAATAATGCACTTATGAAACACAAAATGTGA
AAACATATGTGAATAGACATATCAACTTAATGCAACATAATCCAAAAATA
atccgaaaatatttttttaaagatcgTCTCGTATCAAGTAATTAAAAAGA
ATACTACCTTATTGTACACAAATAAGCAGACATGTAATTAACACAAATTA
GGAAATTTTGTATTGATTGAAACCCCTtcaattaaaaccagccgtggtgt
ccatgaaaaagcaaataaaatttgtgttaatATTTTGCGTGTTATTTCGT
AATTTCAAGGCAGTTAATTATGTGTCTACTTATTTTTGGTATTAAGAAGG
GTATTTAGATTTTGTGATACAcaaacaatgttttttcttatagaagttat
agACTTACACTTATAGAAGTGGTCTAACACAGGACttcgggacacactgt
atatatCTAGATCTTATAAGATCCTTTCACATCTATAACAATAACATATG
AATGTCATTGATTTTTAGAAACACGTAAGAGGAGCTTGGCAGATGGTAAG
TCATAAAGTCATTTGAAAGACTATTTGATATGTCTTTCTGGACAATATTA
CTCCTGGGTACCTAGTGGACAGGAACTTGACTAGACAGATGGTTTTAAAG
GAAGTGCCAAGAAAAATAGTTGAGGGGTTTGAAATAAGAATCAATGTCAC
ATGTGAAAGGTTTTAAGAGAAAAATTAATGTGATGATGATacttttttag
aaacttttaatAAGAGTactttgaaatgttttaaattacattcaagcatt
ttaagtatttttctttcagatgACCAGTCAGAATCACCAATGAATAAAAT
GGCATTTGTTCCTCCTATGGGTGGACCAAGTAAGTATTCTAAACTGCCTA
TATCTTATTTCTTCAACAACATACTAAGTAGTACCCTAACAAATAGTTTG
TGGGCAgccagtcaaaaaaaaaaacacacaacaTTTTAAAGTTCAGCCTA
AGATGGTTGACAATATTTGCATGGTatttgttttttgatgaaaaaaatta
cttgTAAATATGTCTTTTTCACTATCACTCTTTCATCCCTTTTTTAGTTG
ACCCATCGGATCCAAAATCCATAGCTCAACAAGTAGCTAATAGTCTTGTG
CAAAGGTAAAATCCATAAATTCTGTAAATTCTGCCTtatttgaaataaac
aaaattgaTTCAGCTACATCACAGGCAACTCTTGATTATCATGGTAATTG
CGAAATGAGTCGCAACAATGtaacgttttttttctttgcaactTTCATTA
AGGGCTGGTTTTGGTTCAATGCTCGTGGAAGAAGTAATGATTCCAAATAA
ACTTGTTGGGTTAGGTATGTgatctaatttttattatttcaaatcaattt
ccatttttatttaAACATTTGCTATTTATTGCTCAGACCATTTTTCatga
tttaacttttttagaaTTCTGAGAAAAAAGCCTATTTTATGGATAACAAT
TGGAAAACTGCTCTTTGGCTTATAGTGGTCGTTGGTTGCCCTTCTTGAAT
ATATTATGcccttttgttttgatattgtgATATTAATGATAAGAAATTCA
AGCTCTGGCGAAATCTGCATGTGACTTCGTCATTCAAATGACCAATAGTT
CAATATAAAAATTAGTACCATACAAAATCAATAGTTTCAAGTTATCAATA
GTATAAACTTTTATCTTTGATATTGAGATTAGGCACTTTTCATACAGAGG
AATAATCAATATTTCATATAACAAAAAGACCAATCTCacataaagaaatt
attataaatttaCCAAGACACTtgttttgagattgaacctttcgTCATGT
GAACGACGTAGCGATCTTCTAATATAAATTGTTTTCCAGTTATTGGTCGT
GGTGGTGAAATGATCAACAAACTTCAATCAGAATCAGGAGCAAAGATACA
AGTTGCTACTGGTAAAGTTCTTGTTGTTTCAAAACTCATTCAGTTAATGT
TAGAAATATGTAAGGCTGGACTTTGGTCTGCCATCACCTGACCTGAGATA
GTGCCTGATAGAGGTTTTGATttggagagaaaaaaaatcttctttgaaat
AGCAATAGAATTATTTGGGTCAGCAGATTTTGACTTAGGGTCGGCCAGGT
GACGGTGAACCAACATTTCAGACTAATAACATACTCTTTTGATTATCAAC
CCACAAAAACATGAACAATGATAGAGGTGATAAAGGATGCCTTTCTTAAT
TAGTAGTATAATAATATATTTTCAATTCTGTGTGTGAAAATAACcaccaa
aataataaaaataacaattagAAAATTTACTTAGATTTTGTTTGTATTTC
GATACATCTTCTTTCATTTGTAGATCCACCACCAGAGATAGCAGCGATGC
AAACAGAACGTCAAGTCACCATCACAGGAATGGCTGATAATGTCAAGTAC
GTTAGCTAAAAAACATATTAATGTTTTACATAATTCAATAACCAGCAACT
CAGTTCTCTCTTAGTAGAAGTAGGGGGGCCAATCTTTATGATTCGTAGCA
TCTGTCCTTGGACTCGACTGCATGTGATTGTTTTGAAAGTAGATAGGATT
CTGAAACTTTTAGAAAGGGGGCCCGCGGATTAGGCCTGGCAAAAATTTTA
ATGTCCAAAGATCTGATAGAAAGNAAGGGGGCCCGCGGATTAGGCCTGGC
AAAAATTTTAATGTCCAAAAATCTGATAGAAAgtatgatttcaaaaaaat
caacagGAAAAAACTCAAGTCAAAATGTAAATGAAGtcaaatcttttcat
tttaGCAAAGCCAAAAGTCTTATTGACGAGATTCGATCCGAAGGAAAAGT
TCCTGAAAGACTTGTAAGTTTGCAAGTTTCCTTTTAATGATGTATGTGAT
AAACAACTATATATAATAACTGATTTTGTGCGTTTCTATCTCGCATTTAT
TATGGTATTACAGTTAGCACTTCAAAGGAATATGAATTATTTCTCTTACT
TTTTTCATTTAGCTTAgtggaggaggaggaggagccAGCGAATATTCAAC
GGAAATGTTGATTCCTTCAACAAAAGTTGGATTAGTTATCGGTAAGTTAA
CAATAACAACCTCcaaaaacattgttaaaagcaacatttttttcattaat
tctGCCCAAATTTTACTACCTAAAGTGGTAGTATGTCTAGCCAGCTTtgg
aaatttgtttttcttgtttgcaCAAAACGCATTGTCTTGCATATTGGGGT
AGTCTTTTGCTGAAAACGTTTTAATAATTAGACATACAATTTCATTATTG
AATAATTTCTTTTCCAGGAAAAGGTGGAGAAACGATCAAAAGTCTCCAGG
AACGAGCTGGTTGTAAAATGGTCCTCTTCCAAGATGGAGAATATCAACAG
TCCAACGAAAAACCCTTACGCATTAGTGGAGAACACAACAAAGTCATGGT
ACGCTGATTTCCTCCTCCTTCCTCCACAGACTTGATAATTTTTCTTGCAC
AAGCCTAGTGTTTTAACAAGTGTTCTTTTCGTTTTGCTGATCAAGTGAAA
AAAGCAAGTTCtcatgaaaaaatacttttcctCATAGCCAGATTCTCATC
CCAGCCGGGCTTAAGTTTTAATAATTGTGTTCCTAAGTTTAGGCGAAATG
TATtacatgaaaaaaataactatCATAACCTTCTTTTTTTCTAGTATGGT
AAACAATTAGTTCAAGACTTACTCACTCAAAAAGAACTTGAGGTCAGTCT
TTCATGTTTAATATTCTTTCACAATCTGTACAAACAcgatttagtttttt
ttaaggttagagaaaatcattttttacaatagcgcaccgcgctgaatcta
aaaatatattttatttttgacatcattactctcgatgtgtttgtatgagt
tccaatcccatcaacctttgcgttaatctctttcacacgttaaatttcat
cattaaaaaaaaagatgtataacaacttgcacgtatctttaattgagccg
cattgtattgtgggattgcaactcgtacaaatgtcaaaaaaagtgaaaag
tgataattatgacgtatgcgttgcggagcgctattaaCTTGAAGATTTTT
CTCTTCTAGATCCACCCGACTTTGTATAATTAAAGTGATATAGTGGACCC
GGTTTGAGGTGTTAAAAGCCTTGGAATAAGTCAAAATAACATCCTTAACT
CNCTAGATCCACCCGACTTTGTATAATTAAAGTGATATAGTGGACCCGGT
TTGAGGTGTTAAAAGCCTTGGAATAAGTCAAAATAACATCCTTAACTCTT
TTCTAGGCTATGGGAAAAGACTCAAATCAAGGGATGCAAAAGACCCAAGA
TGGACACATTTATGAAGAGGTATAAATTGAATAATAGCAAACCCAAGAAA
TACCACTTATAGTGTAGGGGGCCAATCCTTATGAACGTAGCATCATCTTG
GGACTCAATTGaaactcaaattttgaaacctttttataGGGGTTTGCGGA
TCAGTGTCTGTCGGTCTATGGCCAAAAAACTGACGTTGTAGTCAAATCTC
ATAACCTTGAAAATGAGCAACAAATTGACTACAttaaactctttttttat
aagcatatgggAAAATCGGGTCGAGGCTCAATTACTCTGTACCAAGAGTG
tttctcacgtttatcgcttcgttgtacactctgtgcgcatttttctgttt
gataaaaaaattcccgtatgGAGACCCTCTGTGatgaaatatgattttta
aataGCAACAATactctcatcgtctcccctctctcgcCAACACCCCATCG
CAaaggtcggtttgaaaaatatcaaatgagaaaagataatgacaacagac
cctctacggcaatgaattttgccTGTGTACAGACAAAGGCTCCATATGCT
TAGCAAAACCTCATTTTCAGCTTTGATTAATGCTTACATATTATTCTTAG
ACTTTGATTTGTTGATTTCTTTTGggttcatgaaaatttcgaaatcttAA
GTCAGAACATTGATTCGGCTCAAAGaattaaagttttctttgtaatttgg
cgTCACAGGCGAAAATATTTGGTCTAAGAAAGcacaaacagctttaaaag
taaccctaCAAAGGTTTTAGAAAAGCTACACGATTTTTTTGTATTGCAGC
TTGGGGGTGTATTTAgtattatgcttattttttactgCATTTGAGCCtta
gtatgcttataaacgttatgcttatagaaaaatgaGTGAATTTGCGAAAA
AGATGATGCCTTCTTTTAACACTCACATTTTGCTCGTTAGTTTCAAGTCC
CTCGTGAAGCGGTTGGTTTTGTCATCGGCACCAGAGGTTCAAGCATTAAC
AACATACAACAACAGACAGGATGCAAAGTTCAATTCAAAAGTAAGGAAAT
TGTTTACTAGCTCTCTTGGCCGTAGCACAGATGTCGCTCACTTGATGTCT
CTCTACTTGATGTTCAGCAAATAAAGAGAAGGGTCAAGTGGAAAGTTGTA
GCACCCTCCTCTTCCGTTTCTAAGTCAGTGCTTTAAGTACGTGGTCGATG
CTTGCTATACGGTAGGGTCAAGCTTATCATTCAAAGATTATATTTTACAA
TACTAAAGTCTCTTTCTGGTTCGGCTGTCTTTTTGTGGAAACCAAAGAGG
CCTAAGTGCACTCTGTATAATTATGGGTAATTAAAACAATTTAGCTTTAA
TCGTACATTATTTTCAATGCAAATAGGACCATTTTCTCTCTAAAGTTCAA
AAGCAAACTTATTTTACCAAGCAGGGATACTTATCTCCAATTAAGTAAGA
GTTCTGAGGTCTAACAGCTGGAGATTTTTTATTCTCATTTGGTGACGGCT
TTTTTTCGTCTTAGATGAAATGGAAGGAGATTTCAAGATCGCCATGTTGA
ATGGAACACCACAACAAGTACAGGCTGCAAAAGATGCTCTCGTCGAATGC
ATACAGAGCGTATGACTTTATTATCTATTATTGTCCAATAAGGTTGCAAT
ACATGAAGAAATTTTGTAGCCAAGTAAATCTATTTAAGGGACATTGAATT
TGATTAAGTtgtaaatattcttttttctgTAAACTATGTTAGACGAGAAT
CATCAAAATCagaactgtaatttttttggatCTCCTAAACCATTTACTGT
TTAGGTATCActtgattatttttatttttctcaataGCATTCTGAGAGGA
AGAATGacggtggtggtggtggtggtggtggcaGAAATCAAGTAAGAGTT
TGGTTGCTTTTTCATTTACTGTCCCACACTTTTCAAACGAACGAAGCTTT
TCTGTTTTTACTAGTCAGGAAGTAAGAAGAAGCATAATTGTAATAGCCAC
TTTCCTTTTCATTTAAATACtttaaacataaaattttaaattaatagCAA
TATTGACTAATTGTTAAACTAGAGTAAGTATGAACGAATATGTTAAAATA
AAGACTAAATATAAACTAACGGTCTTTGCCTGGATACCATGTGAATTGAA
AGTAAGAGCAGCCGAGGGATTATTGTTAAATAGGCCGCCCTATCTTACTT
GTGTATACTTACATGAACAGTGCCGTTGTGAAATAAAACacaattaaata
ataaatataaaagTTACGAGAACCTGGTATCTAGGATATCGCTGCTTTCG
AAAGTATGAGTTTTATTgtttattcattcatttattcattcattcatttg
tttattcattcgttcatttgtttattcatttattcattcattcattcatt
cgtttaACTCGACCCATAGCTAAACGGATGGTATTAATTTAGCGTTTCAT
TTTCACCGTCTATCGGGGATCTTCATCAGCTGTTATCACATCACTGAACT
TTGGTGGCTTTTTGCACTGATGGCGGTTTTTTATCAGTGCGAAGGTTGGG
GAATCCAGGTTAACACCTGTTAGCAATCTCAAACCCAAGACAGTGTTCTG
GCTTTTTGACTTTCGGCGATCTTATTGATGTTATTATATGTTGAAATCTA
TTAACTTATTCATACGTCATTCTATAGCAATATTGGATTCCGTCAAGTAC
TTAGTCATCTCTATCTCTATGTGTGACATACTGGACAGGTGGTATCAATT
CGGCATTTTCACTTTCACCATCCATAGGGGAATCATCATCagctgatttt
acgtcactgaAAGCTACCATTGGGACTGTGGGCATTGACGGTGATttctt
tattgttttgtttgaaGAGTCTAGGTTGAAATCTGTATGCAAGTTCAAAG
ACATGACACTTTTTCTTCCTTCCGAAGGCTCCTTGGTGTTAGACTTCTTA
GAATGATCGATTTCATCATATCTGGTTGTTTTGAACCTGTTAACAAAGCT
GTATTCCCTGGGTACTAATTCAATAGTGCTTACTGGTTCAACCTGGAATC
TGGAACTGCCGGTGTTAAATCCAAGAACCTTTTTCATATGGTTCAACCCA
CTAGCCGGTTTATTAACCAGACGATTGGTTACAGCTGTGTACTCATTATC
TTCTTCAATACCTTTGATTAAATAACTCAATTCCTTTGCAACTTTTTGAC
CCTTGGCTCCCTGAatagtttctttgtttttgagatCGATGTTTCTCAAC
CGACTGTAATCTTGAATCAAGCTTTCCTCGATAGCATTTCTCTCAATCCC
ATTATATCTGTGCAAAATTTGTCGAGTTTCTTTCAAATCCTTTTTCCAAG
AGCTTGTGATGGCAGTTGCGGTCTTTGGAGCAATTTCTTTGATCCTCAGC
ATAGCAACACCCATCATGAATATAACGGTAATGTTTATACGTGTTAGCGC
CAAGCTCATCCCTCCTAAACTGCCAAGGTGACGAGCATCAAAGTGAATAA
TTAACTGCGACGATTGATCAGGTGTTACATTCTTAGTGCTGTTTACGAGT
GCAAAGGCCCACAACATCCCAGCATTTACAGCAGGACAAAGCAAGGAAGC
CGATACTACAGCACCAATTAATGATTTCATGTTTCCTTGAAGGAGCGATA
AAGCAACTGCTACACCCGATGGTATTGCAACAATTAAACCAACTATTAGA
CCCCTTGGTTCACCTCTAGATTGCATTTCAACAGTAACTTTGTCCGAAAT
TCCAGTTAAGTAAGCTATCAAACCAATTAAGAAACCAGTAAAAAGACAAA
GTGCTAAGCCAATTAATTCGTTGATAATTGCACGCTTCCAAATTATTTTG
CTTTGTAAAACTAAACCAAACGTACCACCCATGATAGGTCCCATGATTGG
TGATACTAACATACTTGCGACCAAAAGAACGGTACTGTTTTCTAGAAATC
CAATAGCTGATATAGTGCTTGCTACTATTAACAACATAATGTAATCGAAA
GTCAATTTTGACCCAATTTTGACTGACTTTACCACTTGTGCAACATTCAT
TCTTGATTTGAGACTTTTACGGAATTCGTTCATATCATCAGGaattttat
tctctttttccACAGCTGTTGGAAAGTGGATGTTGATGGGAATAATACTA
ACAGAGGAGTATTTATTATTCCCTATCCCTGCATCCAGAAGCGCATTTAA
AAGGCTGTCAGCTTTATCTTCGTCGAGCACAAATAGAATTTTCCAGCTAT
CACTATTTGTATTCCTTAAACATGTAGCATCGATTTTCAATTCCAAGTTA
TTTATAATTGCCTCAAATCTTATAAACCTTATAAATCTAATATTTGAGGA
CAGAATTCTGCTTTGCATTCTAGTGTCGCTTTGTATCTTCTCGAATTGTG
ACCCTTGAGGAAGTTGTCTCTTCATTGGTCTCTTGTTCGTGTTCGGTCAC
TATTTCGTGGTCTTCTTCTTCAAGAGGGAGTGtaacaataaacaaaacaa
cagACATTTTCAATGTTAGTGATTTTTTTAGTACAGCTCTAAATGAGATG
AAGAAGAAATGAAATGATTAAACAAGGGCAGAGTTAGTTTGAATTTGCAA
AAAGATATACTTAAAAAGACTAAGATTCAATCAAATGTCGGCTGagtgta
aaaaaattattcgTGTCCTCTCTCAACTCAAGTAAAGATAAAGCAAGCCT
TACTCATAGGCTTATGCTTCccattaaaaactttttttgagatCGTTAAA
TAGTCAATATAAGATTGTACTTATTAAGAACTGCTGACTCGCAATATTAA
AAGGGGACAAAATCACTGTGTAAATTACCTCAATAATGATAATGTCTTTC
AATGGTCAAAGACATACATTGTTAGGTTGTCATAcacctttttttgataa
gaaaCAGTAAATTTTTGACGATGCGTTTTAAGCCTCATATTGTTTTTTCA
TATTCTTTTTAGAGCAAAATTGAGATATGTTAGGCTCCGTGTCCAGACCT
TGATCCTTTAAAACTGCTGGAAATTCAGCTATTCCAACTGTCCCTTTCGT
TCTTAAACTGTTCTTTTTTTGTGGTGATTGGAATCtccatgttcttataa
aataactttAGTAAAAggagtactcttaggtgccaaataaacgccccccc
ccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNccaaccccccccccccccgtttatttgg
cacctaagaatAGTTATCTATTGATTCCACGTTCAGGAAAATGAAGGATA
GTGAAGGGATAAAAATGACGAGGACTTTAAGAATGTCTATTTAAATGATC
AACACTCAAAATGAAAGTTCATTCAAAATTTCCCAGTGCACATTCAGCAT
TAGATAGTACTTTCAAACGTGAGAATAACCATAATACCTTAgactattta
tatttatatatatagAGCATGCATAACGGAATAAATGCAAGTAGATATAT
AATAAGGTTATACTTCCTGTTTTGAGTGCTCTGAGAATAAAGAATCAAAA
TCAATTACACTGAATAAGAATATTCTTAAGGTAATAAGTGTGTACGTCTT
TGTCTGatataattttctttgaaaaatttaagaaaaaacctCATCTTTTT
TGTTAGAGTTGGGGTGGTAATCGAGGAGGTGGATGGAATGGTCCTGATGG
GCGTAATGGAGGGCCAAGAGGTTATCGTGATCAAGGGCGGAATACTGGTG
GTGGGCGCCATCAACAATTACCACCCGGTCATAAACACGTCTGTGTTGAC
GTGCCTTCAAATAAATGTGGTCTTATCATTGGTAAAGGTAGGTGTTTCAA
GGGAACTATTTTTTACGGACTGGATGtatgaaataattgattttgCGGAA
CTTATTCTCACGGTTGACACTCTTAACCACGAAAATTAGCCCCCTAAGGT
TCTGGTGTCAAGAATATTTACTTCATCATACTAGAAATATGtgataataa
ataaaaatatgaatGGGCTTAAAAATTAAATGATAATTTCGAGAGTTCGT
ATCTTTCGGTGCATTGTTTCACATAAAACGTACTGAtgaggatttttttt
taaatcattattCCGTATCGCAGGTGGCGAAACTTTGAAATTCATCCACC
AAGATACCAAAGTCTTTATCGAGATTGAACGAAATTCACCTCCAGATGCA
CCAACACGAGTTTTCCATCTCAAAGGTACCTTTTATCTCTCCAATACACC
CTAAAATatattgtttctttttcttttgttttacagCGTACCCTCACTTA
AGTTGAAACACCCACCAACTAAAAAACGCGCAAAACTTTTAAGATACTCC
AATATATGTGTGAAGCGATCGTTTTGGACTCCCTGCTTTGGCAATAAAGA
AAGCCCAATTTCTTCGATAAATAAAGAAATAAGTGCAGTTTTCGCAAAGT
ACGATAACtctctttgaaaattttctgtATCGTATAATTCTTGAACCGTT
TCTTTTACGATAACAGGTACGGATGAAATGATCGAAATGGCGCTCCACGA
AATGAGGGATAAGATCAATGATCAGGTAAAGTTATTCAAGCAAGATGCCA
CCAAATCAAAAATGCTCTTTTTAACAAGGATTGTTCAGCAAATGATCTTT
CAAGTGTGGTTTCTCAAGTGGGATAAAGCCTATCAACACCACGAGGGTGA
AGAACATTGTCAATCTTAGTTCATCACCGGTTATCCCTTTTTAAATTACA
TGTTTTAGTTTGATTAAAAGGAATAATCAGTAAAGTCGAGACAGGTCGAG
AAATGACGATTTAAAATCTTAATCTTAAATTTTAAATGCTTAGaatcaaa
aaaaacttataaCTTTATTATCACGACTATGGAAAAAAGTTTGACAAAAA
GGTTTGGAggttttgctcaatttttttctcGTTCTTTTGCAACATATATT
TTTCTGTTTGCAGAACATCTGCGCCAGACCATTCATGCCACAAGGAGGCG
GACCGTAAGTCGTCTTCTAAATCTACCCCAATCAATCTTCTTTAATTGAA
AGCCCCTCCCTGTACATTCTACATGTCAAAATTGCAGTGGCTTGATAAGG
ATGGTTGGACGTTTATTTGCGAGTTTCTCgagttttctttttattattta
attCCCAGTAAATTTGAGATAATATTGAAAAGGTAAGCAGAAAACGGAAA
ATTCAACGACAAAATGCttcatttggaaattttttttttcatctcccAGC
ATTTTTCGTTCGATATCTGCatattttgtataattttatacatttttttc
tgTTATAGTGGCTGGGGTGGCCCAGGAGGTCCTGGGGGACCTGGAGGATG
GGGTAACCAAGGTTGGAATCAAGGAGGAGGCTGGAACCAGGGTGGTGGTT
GGAATCAACCCCAAGGAGGATGGGGACAAGGTGGATGGAACCAAGGAGGA
TGGAATCAACAGCAAGGAGGATGGGGGCAACCTCAACAAGGAGGATGGGG
ACAACAACCCTACCAACAGCAGCAATGGGTAAGTAAGCTATTGCTGCCCG
GCCCTAAGTACCGTGTTGACTACCTCTAATTATGAAGCACTGTCATTTTT
TGTCCGCCTCAAAGGCAATGGTTCAAAACGATAACCTCGTCCGCATAATT
TGTTAACATCTGAAACCTCTATCTATCACTCGAATCAAGAAACCAAATTC
TCCTCTttataacaaagaaaaaattggcAATTAGTTGAATACGAAATTGT
TCTTAGTTTATCGAATGTTAAATTCAATTGCGTAAGCTGTATGTAGTTTG
TTCATTCGCCAACTATAAACTGCTTTTCGATGCACATTCTAGGGACAGCA
ATCGAGCGCTCCCAACACTTCAACGACTACCACCACACCCACAGCCAACC
CAGCAACAGGACAACCCGATTACAGTGCAGCATGGGCGCAATATTATCAA
CAACAGCAGATGTATTACCAACAATATCAATCTACCGCCGCCTCAAGCTC
AACTACAACGACCACGACCGCCTCATCTGCTTCAGgtacattcttttgtt
ttatattgTGATAGAGATTTTTTCGCTGGTTCAACAAATGGTTGACACCC
ACAAAGACTCTTTTCGATATCAAGATGGTTCAGGGTGTTTtaagtttgtt
taaaactgGTAGTGAAAGTTGATTCTGTTTGTTCCTGGTCCAAATCAAAA
CGTTCTGTCGGCAGCAACTATTAAATTCTCATTGATTATTTCATATGGAT
TTGGGCATTTCTGTAACATAATCTGAGGGCTGTCTTTTCTGCCAGGGGTG
GCCACAACGTTGCATTAAACGAGGTACTTTTAGAGTAAAAGTTTGTAACA
AGTACTTTCCCTTAAAGAGGACATTTTTCACCATATTAACAGGTGGAGCT
CAAAGCCAATCGATGGAAGAGTACCAGAAGAAACTAGCCGAGTATTACAA
GCAATACGGACAAGGGGAGGCTGCCAAACCGGAAAAATAAACGGGAATGT
GAAGTGATTGAATGGGAACTGTCGAAAAAGGTGGGTTTATTTCTTTTGCT
TTGAAGTTTGGTACAGAATTGTATAGAAAAATGATTGAGGTTCTCTCTGA
ATAAGATTCAAGACTTTTCTGGACCTAATACGATTCAAACGCTGTCACGT
TTTTAGAGAGAATCtcgtatttttttctaaacaattttGTATTACATTTT
ATATTAACAGGTAAGTCTTTCCTTATTACAAAATTATCAAATTACTGTTG
TATACTCTCTTGTacgttgttttgtttttcttactCTTGTTGTAGATATT
ATGAAGTTCATTCCACTGTATTATGCTGGTGTATTATACTACTATCTACT
GTTATATTGACTGCATTGATTCCACACTGTTATTACATACATATTACATA
TGATATTATGTCTGATATTACATGTGTTTCTATATTATCCTGTTACACTG
CATTGTATGCTATTATAAAACTCATTACGCAGGAGGTTTGCTGGATCATG
CTATGGTGGTATTATGTGTATATAACTTTATGATCTCATTTTTTAAAGTA
ATATTTTGACCCAGCGGGTCGAAATATCGAAGGATTTTTACTTTTACTAC
ATattaaaatgagaaaattttaaacattgatttttcaaatatattttatt
ctttctcttttttggaaatgaaaacCAAAACctattcaaaatttacaaac
aTTGGAGAACTTAGCTTCGATCTTTTGAATCCCTCTTTTTACTGTGATCC
TGCTATCTTGAAAACCTCTCTCGCTTGTAAAATTGGGCTTGGTTTTCATT
TTCCATATTTTGTGTAAGCTCGTTCTAAAGGAATtctgttcttaatttct
tttGCTACAGAATGACTGGTAAAATTGTGAGGCTGCAAAGGTGAAATGGT
TtaagctttcaaaaaaattaactcgccaaataaaatggtaacgGTATTAC
ATTTTGAACTGAAAATTTACAAACTGTATTTGCTGAGAGGTTAAACAAGG
ATGGCACTTCTTAAAAAGAAGTCTTGTTTTGTCATCTACATATCAGagga
aaaatttgaattccGGCCTTCCGATTCTTTACATTGAAGAGGCTTCTAAT
CTAATCTAATTCTAATAATTTCCAAGCTGAAAACAAGTAATGAATAATAA
CCCTGAGAGTGATAACTTATTAGTGCGATGGAAATCACTTATTTTTATCT
TCTTCTTAGGCTTCCTTGTTTAACCTCGCATCTAAAATCTGTTGATTGTT
ATCCAAAACATTTGCTCTGTCCTATTTCACCTGCACGATAATTTTGAATT
GCTAGTCATTACCCTCACACCAAGTATTATagtgcatctttttgaaaatg
attctTTAGTATTCCCTAATTATTATCACCTAGTTCGCATTTGAAATTCg
cattatcatttttcttttgaaaatgattcTTCGGTGTTGccttattattt
ttcatttttaacgtTGAATGACCTTATTGAATTGTCTATGTTGTGTGTTG
TTGTTTGTGTTTATTTATTTGAACGAGAAAGTAACATTGAGCAGGAACTG
TGTATTACAACGCTGGTCGGGCAATATGTGTGCTACGTCTTACTTTGGGA
TTACTGGATTTCCTTCATCTTGTCTACTGGCTTGCCTTGCACATCTACAA
CGTATGATAACTTAGACGGTTTATTTGTTGTTACCATCAAACAGCCTTTA
TATAGTTGATGTTTATATTGAAAGTGTAATTGGTAAGTATATTATTTGCT
TCACTTTTTATGTCCGTACACTTCGAGGTTCTGTAATTTCTACCGCCCAT
TGTAGATTGCAGTTATTGgtttaaataatgttttaatGATTctggtattt
ttgaaatttcacagATGATCAACTTGTTACAGAATTTTCAGACTACAACC
AAATATGTATTCTCGTTTTGAAGAGTTAATATCAATCACGCACAATGCGT
TTGTAAGAACAGTACAAGGTGTTTTTAAGTGTTTTTGGATGATAGGATGT
AGTCATCCATACAGTACGTACGCTAAATTTTCCAATTATTTGACACTCCt
tttgtacgcagagaacattAAACTGACGACATGAAAACAATAgagtacgc
ttttgctaaaaaGCTAACCTATAGGACTCTCTCTCTCTACTTAgtaaatg
ggctcttccagaaaatgtccttATATGGGGGGTGGAGAATATAATGTCCG
TGGGGTAGcggaaaatcatcaaaatttgcttgTATGGGGGTAAATTTTCT
CTGTCccggggtaatttgggttgtccggggggtcaactgatgcttgtccg
gggggtgaAACCTGTTGCCCGGGAGCAAAagtcactgaaaattgttatat
cctccactcccccctgatattcattttttttctggaaaagcccaatacta
TTCTTACAAGTGCACACTTGTGTACAGATTTATTTCAGGATTATGACTGC
GTCATGAGCAGCTGACAAACGATCGTTGGAAAGACATCGAAATCAAACTT
ATTTCATAATATATgtactctttaactcgaacaagttttatcgtcccttc
agttaacaatgccttatacatgttttttggacctaccccggtggaggtcc
tataaattaacctgtgtttgttcgtccgttcgtccgtccgttagtctgtt
accaacttttctcaggattgaatcataggaatcttttgatttttggtaca
aaggtgcaaaatggtggtggccaaaatgtgacggagcccgattttcgaaa
aaaaaattttttgggccaatttgggctaaaaaacgggttttttagatttt
gtgaaaaattgggtcattgattttttctgattttttgtatgaaagtaggg
taccatcataggtaaaagatggctcaagcagatttttgcaaaaaaatttt
gttggctcaaaaaac

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008265	XLOC_008265	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000198	supercontig	sc0000198:156867..173631 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.34352	5.26374	8.98531	9.21703	0.883658	0.673855	0.542903	0.360611	1.41503	1.66543	2.21816	1.18098	0.796565	0.331732	0.395766	0.41432	0.77589	1.01199	0.755269	0	1.45097	0.00346487	2.32067	0.00249349	0	0.166036	3.06784	0.0276944	1.55528	0.746473

Blast

[Close]

BLAST of TCONS_00014763 vs. Swiss-Prot (Human)
Match: FUBP3 (Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 3.630e-52
Identity = 139/402 (34.58%), Postives = 213/402 (52.99%), Query Frame = 2

Query:  302 SMLVEEVMIPNKLVGLVIGRGGEMINKLQSESGAKIQVATDPPPEIAAMQTERQVTITGMADNVNKAKSLIDEIRSEGKVPERLLSGGGG----GASEYSTEMLIPSTKVGLVIGKGGETIKSLQERAGCKMVLFQDGEYQQSNEKPLRISGEHNKVMYGKQLVQDLLTQK---ELEAMGKDSNQGMQKTQDGHIYEEFQVPREAVGFVIGTRGSSINNIQQQTGCKVQFK-NEMEGDFKIAMLNGTPQQVQAAKDALVECIQSHSERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRDQGRNTGGGRHQQLPPGHKHVCVDVPSNKCGLIIGKGGETLKFIHQDTKVFIEIERNSPP--DAPTRVFHLKGTDEMIEMALHEMRDKINDQNICA 1477
            +++ EE  +P+K+VG +IGRGGE I+++Q+ESG KIQ+A++     ++   ER   +TG  +++ +AK L+      G++ +R  +G G      ++    E+LIP++KVGLVIG+GGETIK LQER G KMV+ QDG      +KPLRI+G+  KV   +++V +++ +K   +   +  D N  M     G    E  VPR AVG VIG  G  I  IQ   G ++QFK ++     + A + G P + Q A   + E I +  ER   GG     GR +  G    G                              P G + +   VP++KCGL+IGKGGE +K I+Q +   +E++RN PP  D   R F ++G  + IE+A   + +K+   N+ A
Sbjct:   76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASE-----SSGIPERPCVLTGTPESIEQAKRLL------GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRM-----GGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGA-----------------------------PGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLIDEKVGGTNLGA 432

The following BLAST results are available for this feature:

BLAST of TCONS_00014763 vs. Swiss-Prot (Human)

BLAST of TCONS_00014763 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FUBP3	3.630e-52	34.58	Far upstream element-binding protein 3 OS=Homo sap...	[more]

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TCONS_00014763 (transcript) - C. hemisphaerica