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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014770 ID=TCONS_00014770|Name=TCONS_00014770|organism=Clytia hemisphaerica|type=transcript|length=1558bp
CTGGTAAGGATACCCCTAGGGTTGGGGCTAACGCTGGTGATGTCAATATa
taggtctgtaaaatacacactatTAGTAGATTGTGATTTCGAATTTATGC
CGTGGTCTAGTGGTAGCGTACGGAGCTTCTGAATTGAAGGTACTTTTCAT
ATGTGGGTTTGAATCCCACCCGGAactcaattttggcaaatttcaaaata
tcaaagttGAACTCTAAAATTGACTAATTGTCCAACTTAGAAACATCCTA
AAGGTTTAGAAACTTCAGAAAACTCCAGATCAAAgatagaaaaatacaaa
atctaCTTTCACCCGTATGAAGAAGCCACAACCTTTTTACAACATTCATT
TTCCCAGGTCAATTATACCTAACTTTTCGTAATTTATATTTAAAAGGAAT
TTTGTTCATCTAGTCTTGTACGCGTACTGTGAAgcaaattgtgtattttt
ttctgaaaattgtacTATGCTCCTTCACTTTGTAGAGCACTCTTGGAGCA
TTGCTTAACCTTTTATCGATTAtatatcgattatttatcaattACTTTAC
CCTATGGATTAGGAAGTATTGATTATCAAATTGTATCTGACAAATTCAGA
TGCCAAAAATCAACTAGTGGGACTtagaccacgttcacacgctacgTTCT
GTTTTGCTCCAAAACGAATCGATTTTATTGATTACAACCCCCTGGTGGAC
ACTGGCACTTGACTAGCTCAATCAGTCTAGACTTAGACTCCTATaccagg
attagaaactagaattacaagaagaagaaaaaaattaaaaacagcaTTGG
TAACCAGAGAGTTGGAGAAGTTACCATATTATATAGAAAAATAGGATAAA
TTgaactttttgttgaaaattgaaaaaaaatggaGATTCTTTCCAGCCTG
ctatattttgttttatttactATTGCTTTAATCGCTGATCCTGTAGAAGC
TTTTGATGGCGGAGATGCAGCAGCCCTTATTATTGGTTTGATGATTGGAA
TCCTAGGTATCTGTGCCTGTATTGGTGCCTATGCTCGTAAAAGATCTGGA
CAATAAAATTCTGCAACCATTGTTTGAAAAATTGCTTCTGGGttcttttt
ttgtgtttttttttatttttttctacagtTTAGACACCTTATACAgaatt
gtatttttataaaacatttttttaggataataaaagaaaatatatttaat
tttttcattatgGTATGATTGATTTTAAAGATTGTCATTGCTGGATTTGG
AATCAGAtaataaaaaagcttttgaagGGAAACAGTGATTTCTTTACATG
ATTTCTTCTGTTTCTCCAACAAATACTCAATTTTGATTATAATATTGGAT
TTTATGTactttctattttcttttttcaagtaTTATAGATCTATGTTGAT
TAAATAATTTGGATTGGATTTTGTATAATTTGACTAGTTgtctattttga
tttttttcgtaTTGGGTAAAGAATTTCGTagtattttaattttcagatgC
ACTTTATAATTATTAGCAAGTCAATAAGTAATTTAATGATACATGTATGC
TCTACAgc Run BLAST on NCBI transcript from alignment at sc0000198:220736..223529+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014770 ID=TCONS_00014770|Name=TCONS_00014770|organism=Clytia hemisphaerica|type=transcript|length=2794bp|location=Sequence derived from alignment at sc0000198:220736..223529+ (Clytia hemisphaerica)
CTGGTAAGGATACCCCTAGGGTTGGGGCTAACGCTGGTGATGTCAATATa
taggtctgtaaaatacacactatTAGTAGATTGTGATTTCGAATTTATGC
CGTGGTCTAGTGGTAGCGTACGGAGCTTCTGAATTGAAGGTACTTTTCAT
ATGTGGGTTTGAATCCCACCCGGAactcaattttggcaaatttcaaaata
tcaaagttGAACTCTAAAATTGACTAATTGTCCAACTTAGAAACATCCTA
AAGGTTTAGAAACTTCAGAAAACTCCAGATCAAAgatagaaaaatacaaa
atctaCTTTCACCCGTATGAAGAAGCCACAACCTTTTTACAACATTCATT
TTCCCAGGTCAATTATACCTAACTTTTCGTAATTTATATTTAAAAGGAAT
TTTGTTCATCTAGTCTTGTACGCGTACTGTGAAgcaaattgtgtattttt
ttctgaaaattgtacTATGCTCCTTCACTTTGTAGAGCACTCTTGGAGCA
TTGCTTAACCTTTTATCGATTAtatatcgattatttatcaattACTTTAC
CCTATGGATTAGGAAGTATTGATTATCAAATTGTATCTGACAAATTCAGA
TGCCAAAAATCAACTAGTGGGACTtagaccacgttcacacgctacgTTCT
GTTTTGCTCCAAAACGAATCGATTTTATTGATTACAACCCCCTGGTGGAC
ACTGGCACTTGACTAGCTCAATCAGTCTAGACTTAGACTCCTATaccagg
attagaaactaggttAGTCTTACCTATTTCATctttcccaaaaaaatttg
ggtCTATGTTTATTGGTTGCCTGAGAAATGACCTTAGCAGGGATTCCATT
TTCATAATGGCAGACATGGTTATCTGTTCAATTTTATCAATCCATCTTTG
ATCTGGCTactcaatttttgttttgggaTTTTGCAAAGCAGCTGAAACTT
CTATTCAGTGGGAGGTTTACTGTCAGTCTAAATGTTTATTCCTTTGACTA
AAAGTAAAAAGATCGCTTTGACTCCAATTCAAAATGTagaatgtatataa
aaaaatcaagatagaGATCCTTGTAGTCAAACTGACAAAACATCCAGTGA
TCGAAATAGTGGTGGATCATCATATAAAACCGACCAGAAATGAAAAATCA
ATGAATATTTGAGTGATCTGTATTAATTATTAATCCTATACTATTTTGTT
AATGTTGGTCCAGCTATCTTTTGGAACAATCATTTTGAGTGCCGCTAAAC
ACTAGCGATTCACTAAAATCAAAGACTTACTAAAATCAAAGACTTACTAA
AATAACCGATCACAACGAAAAAGCTCAAACATATGTCTTTGTTAATTTGG
TAGAGTATCTAGTTCAACAGGTCTATTGCTATTTTCGTGAagtgaaattt
gaatttgtaGAATTTTATCCGGAACAGGAGTATAGTGACTTTTTTTGAGA
GTGCCCCGACCAAAGCAGGTTTTAAAAAGGATAGCCACCTAACTTTTTCC
AAATAAAATGTTTGCcccttcacttttttcaaacaaaagtgTTTTTAGGG
GAGTCCATTTAATGAATGTTAATGACATTCAAATACAATTACTTGCCAAT
TGAATCCTAGTGGCACAGTGGGTACCTAGGCCCCTTTGGGAGAAGGCAAA
GGTGATAACCATCATACAATACACCTTGGTAattaatatttgaaatatta
aatATTCCAACTTAGTTCCTGTGAAAAAGTGCCTGTATTGAATAATGCAA
TGTGATATATTTCCATACTGAGTATTTTTGAACCACAATTCATTTATTAT
TGAAATGCCTTTTATCAAAACATAGCTATTTTGATTGTgaattattaaaa
tatttttattgcacCTTGTATATGGCATGCCATCTGGAAATTctcaaaag
aagaaagaaatagaagattttgaaatatctcattttgagcttttgatTTC
AGATTATTGTATTGATATGAAATAtatgatttcattttttaatcttagaa
ttacaagaagaagaaaaaaattaaaaacagcaTTGGTAACCAGAGAGTTG
GAGAAGTTACCATATTATATAGAAAAATAGGATAAATTgaactttttgtt
gaaaattgaaaaaaaatggaGATTCTTTCCAGCCTGctatattttgtttt
atttactATTGCTTTAATCGCTGATCCTGTAGAAGCTTTTGATGGCGGAG
ATGCAGCAGCCCTTATTATTGGTTTGATGATTGGAATCCTAGGTATCTGT
GCCTGTATTGGTGCCTATGCTCGTAAAAGATCTGGACAATAAAATTCTGC
AACCATTGTTTGAAAAATTGCTTCTGGGttctttttttgtgttttttttt
atttttttctacagtTTAGACACCTTATACAgaattgtatttttataaaa
catttttttaggataataaaagaaaatatatttaattttttcattatgGT
ATGATTGATTTTAAAGATTGTCATTGCTGGATTTGGAATCAGAtaataaa
aaagcttttgaagGGAAACAGTGATTTCTTTACATGATTTCTTCTGTTTC
TCCAACAAATACTCAATTTTGATTATAATATTGGATTTTATGTactttct
attttcttttttcaagtaTTATAGATCTATGTTGATTAAATAATTTGGAT
TGGATTTTGTATAATTTGACTAGTTgtctattttgatttttttcgtaTTG
GGTAAAGAATTTCGTagtattttaattttcagatgCACTTTATAATTATT
AGCAAGTCAATAAGTAATTTAATGATACATGTATGCTCTACAgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014770-exon-sc0000198-1491911889:220736..221497 | TCONS_00014770-exon-sc0000198-1491911889:220736..221497 | Clytia hemisphaerica | exon |
| TCONS_00014770-exon-sc0000198-1510915933:220736..221497 | TCONS_00014770-exon-sc0000198-1510915933:220736..221497 | Clytia hemisphaerica | exon |
| TCONS_00014770-exon-sc0000198-1575043694:220736..221497 | TCONS_00014770-exon-sc0000198-1575043694:220736..221497 | Clytia hemisphaerica | exon |
| TCONS_00014770-exon-sc0000198-1491911889:222734..223529 | TCONS_00014770-exon-sc0000198-1491911889:222734..223529 | Clytia hemisphaerica | exon |
| TCONS_00014770-exon-sc0000198-1510915933:222734..223529 | TCONS_00014770-exon-sc0000198-1510915933:222734..223529 | Clytia hemisphaerica | exon |
| TCONS_00014770-exon-sc0000198-1575043694:222734..223529 | TCONS_00014770-exon-sc0000198-1575043694:222734..223529 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000198 | supercontig | sc0000198:220736..223529 + |
Blast
The following BLAST results are available for this feature:
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