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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014814 ID=TCONS_00014814|Name=TCONS_00014814|organism=Clytia hemisphaerica|type=transcript|length=1098bp
ggccccaaaaatcaaaaattttgaaaaatgaaaaaaaacacccccagata
ttcacccaaggaacaagtgtgccaaatttcatccaaatcttttttgaagt
gtccagcctgccctaaagttttcggacggacatacatacatacatacaga
catacatacagacattctcagattatagctcaactgaagttgagaataac
aaaaatactgatacTAGTATATCACAAAGTGATACAATAAACTCTAACCC
AGTCTCTTGGCTTGGTAGAGGTGGAACAGTGGAGTGGAgaaatttttaat
ataataaacataacaatatcaaaattacaaaaatactgattcaaaatata
ttataaaagtGATACAATAAATTCTAACCCAGTCTCTTGGCTTGGTAGAG
TTGCAACAGTGGAGtggagaaatttttaaaaaataaaaacaataatatta
aaattacaaaaatactgaTTCAAAATACATCACAAAGTGATACAATAAAC
TCTAACCCAGTCTATTGGCTTGGTAGAGGTGCAACAGTGGAATGGAgaaa
tttttaatataataaaCATGACAataataaaattacaaaaatactgaTTC
AAAATACATCACAAAGTGATACAATAAACTCTAACCCAGTGTCTTGGCTT
GGTAGAGGTGCAACAGTGGAATGGAGAAATTTTAATATAATAAACATAAC
aatatcaaaattacaaaaatactgattcaaaatatattataaaagtGATA
CAATAAACTCTAACCCAGTGTCTTGGCTTGGTAGAGGTGCAACAGTGGAA
TGGAGAAATTTTAATATAATAAACATAACAatattaaaattacaaaaata
ctgattcaaaatatattatagAAGTGATTGTATGTGCAAATAATACGGAA
CACAATAAATAATATATATGTCtaaatgatgtaatctttttaaCCATTTC
AGCCCCAGAGACCAGCGTTAACAAACTTCACCGGACTATATCTCCGGAAC
TAAGTAATCTCCAGAACTAAGTAATTTCTGGTGCTCTCGTAGCTACCATT
AGCAagagcatcaaattttaaagaaaataggtTGATTTCGGAGCGCCC Run BLAST on NCBI transcript from alignment at sc0000198:386672..388843- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014814 ID=TCONS_00014814|Name=TCONS_00014814|organism=Clytia hemisphaerica|type=transcript|length=2172bp|location=Sequence derived from alignment at sc0000198:386672..388843- (Clytia hemisphaerica)
GGCCCCAAAAATCAAAAATTTTGAAAAATGAAAAAAAACACCCCCAGATA
TTCACCCAAGGAACAAGTGTGCCAAATTTCATCCAAATCTTTTTTGAAGT
GTCCAGCCTGCCCTAAAGTTTTCGGACGGACATACATACATACATACAGA
CATACATACAGACATTCTCAGATTATAGCTCAACTGAAGTTGAGAATAAC
AAAAATACTGATACTAGTATATCACAAAGTGATACAATAAACTCTAACCC
AGTCTCTTGGCTTGGTAGAGGTGGAACAGTGGAGTGGAGAAATTTTTAAT
ATAATAAACATAACAATATCAAAATTACAAAAATACTGATTCAAAATATA
TTATAAAAGTGATACAATAAATTCTAACCCAGTCTCTTGGCTTGGTAGAG
TTGCAACAGTGGAGTGGAGAAATTTTTAAAAAATAAAAACAATAATATTA
AAATTACAAAAATACTGATTCAAAATACATCACAAAGTGATACAATAAAC
TCTAACCCAGTCTATTGGCTTGGTAGAGGTGCAACAGTGGAATGGAGAAA
TTTTTAATATAATAAACATGACAATAATAAAATTACAAAAATACTGATTC
AAAATACATCACAAAGTGATACAATAAACTCTAACCCAGTGTCTTGGCTT
GGTAGAGGTGCAACAGTGGAATGGAGAAATTTTAATATAATAAACATAAC
AATATCAAAATTACAAAAATACTGATTCAAAATATATTATAAAAGTGATA
CAATAAACTCTAACCCAGTGTCTTGGCTTGGTAGAGGTGCAACAGTGGAA
TGGAGAAATTTTAATATAATAAACATAACAATATCAAAATTACAAAAATA
CTGATTCAAAATATATTATAAAAGTGATACAATAAACTCTAACCCAGTGT
CTTGGCTTGGTAGAGGTGCAACAGTGGAGTGGAGAAATTTTTAATATAAT
AAAAACAATAATATCAAAATTACAAAAATACTGATTCAAAATATATTATA
AAAGTGATACAATAAACTCTAACCCAGTCTATTGGCTTGGTAGAGGTGCA
AATGTGGAGTAGAGAAACTTTTAAAATAATAAACATGACAATATTAAAAT
TACAAAAATGCTGATTCAAAATATAACAATAGCGTTCAGTTTGAGGTCGT
TGTTTTTATTTTCTGCCCGCGTAGTTTGATTTTTCGCCCGATAGTGTCAT
TTGAGCCCGACGCGAAGCGGAGGGCGCAAATGGCACTAGAGGGCTAATAA
TCAAACTGCAAGGGCAGAATTAATGCAACAACGAACGAAAACTTAACGCT
ATTACTATTATTATTCATAGCGGACATTCAAACAACGTTTTTTTTCTAAT
GTCAACCAAGTCTTTTCGCTTCAATGCAATCTCTTCAACAAATTTTTAGC
ACCTTGCGAGCGGGCCGCAAATGACCAAAATATGTTTTTTTTCTGACGTT
ATTTTAGTCTCTTCGCTTCAATGCAACGACTTTAATCCAATTCCGAGCGG
GCCGCAAATGACGTTATTGCCCTATACCCGGGCGGTTAATGATATTTCAG
CCCTCTGAGGCCTGGCGCTTTAGTTTCCTCAGCACAGGTATGAGAATTTG
AGTCACAAACTCTTTAAATACCGCCCGCCGATTGAACCTTTAATAGCTTA
CTTAATGACCGCTATATGGATAATAATATATTATAAAAGTGATACAATAA
ACTCTAACCCAGTCTATTGGCTTGGTAGAGGTGCAACAGCGGAGTGACGA
AATTTTTAATATAATAAAAACAATAATATCAAAATTACAAAAATACTGAT
TCAAAATATATCACAAAGTGAGACAATAAACTCTAACCCAGTCTCTTGGC
TTGGTAGAGGTGCAAAAGTTTAGTAGAGAAATTTTTAATACAATAAACAT
AACAATATTAAAATTACAAAAATACTGATTCAAAATATATTATAGAAGTG
ATTGTATGTGCAAATAATACGGAACACAATAAATAATATATATGTCTAAA
TGATGTAATCTTTTTAACCATTTCAGCCCCAGAGACCAGCGTTAACAAAC
TTCACCGGACTATATCTCCGGAACTAAGTAATCTCCAGAACTAAGTAATT
TCTGGTGCTCTCGTAGCTACCATTAGCAAGAGCATCAAATTTTAAAGAAA
ATAGGTTGATTTCGGAGCGCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014814-exon-sc0000198-1575043694:388020..388843 | TCONS_00014814-exon-sc0000198-1575043694:388020..388843 | Clytia hemisphaerica | exon |
| TCONS_00014814-exon-sc0000198-1575043694:386672..386945 | TCONS_00014814-exon-sc0000198-1575043694:386672..386945 | Clytia hemisphaerica | exon |
| TCONS_00014814-exon-sc0000198-1510915933:388020..388843 | TCONS_00014814-exon-sc0000198-1510915933:388020..388843 | Clytia hemisphaerica | exon |
| TCONS_00014814-exon-sc0000198-1510915933:386672..386945 | TCONS_00014814-exon-sc0000198-1510915933:386672..386945 | Clytia hemisphaerica | exon |
| TCONS_00014814-exon-sc0000198-1491911889:388020..388843 | TCONS_00014814-exon-sc0000198-1491911889:388020..388843 | Clytia hemisphaerica | exon |
| TCONS_00014814-exon-sc0000198-1491911889:386672..386945 | TCONS_00014814-exon-sc0000198-1491911889:386672..386945 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000198 | supercontig | sc0000198:386672..388843 - |
Blast
The following BLAST results are available for this feature:
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