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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014824 ID=TCONS_00014824|Name=TCONS_00014824|organism=Clytia hemisphaerica|type=transcript|length=1192bp
TGGTAGGTCGTGATCGTTTTCAAGCATCTGGACGATTATGTTAGTAGCTT
CCTCTACAGGTACTGTCGGATAGAGGTTTACTACGTCATACGACACTTGA
ATTTCATCGGGGTCAACGTCCCAGGATCTAGTGAGCTCAGCGAATGTGTA
CGAGTTTTTGAGCCTTGTGTTGTTTTTGTTTAGAGTTGGTTGAATAATTT
TCACAAGGTATTCTGAAGTTCCGTACGATGGAGTACCGATAGTTGAAACT
ACCACTCTCATAGGGTAATTCTTTTCCGGTTTATGAGCTTTTATGGTTCC
GTACATTCGAGGTGGTATCGGATCGGATGGATACAGTTTTTTGTACTCTT
TATCAGTGAACTTCCCAGCTTGGTGAAGGGGTCGAAGTGCATTCTGAAAC
TTTCGTGCCAATGTCGATGTTGGATCTTTTGTGATGATTTCCGTGTTGCC
GAGTTGTTCTTCGATTTTCGCGATAGCATCATCTCTATCGATTCTGACAA
GACCAGCACCTTTGTCAAATGGGTAAATAACATTCTGGTTATCGGATTTA
AGTTCTTTGAGTGCTTTTCGTTGTCGAGAATCAAGATTGTTTTTAGGTGG
TTTTGTCATTTTAAGATCGCGCAACACGTCTTGTCGAAGTTTCATTGGTA
CTGTATCTTCTTTGGTCGCGTATTTGATTTTAAGTGCAGTTGACTCGGTC
TTCGAAATGATGTCGAGGTACGGGATGCGCGTTTGGGTTGGTACAAACTT
TGGTCCAAGGTCGAGTAGCTCACGATGGTGGTCTGGCAACGGGTCATTGC
AGAGGTTTAACGTAACCGGTTTGATCGTTTTTTGCTCGATGGTGATGTTT
GGTCGATCGTTTGTTGGTGACAGTTTTTCGAATTTCGTTTTCAAACGTTC
TTTCCACTGGAGAAAGGATGTTGTCTCTGACTTATCGGTGACAGTCTGTA
TAATGTTCATATGTTCAGCCGATAGTATGGGTCGAAGTTCAGTCAGAAGA
TCTTTGATTCGTTTTAACGTTTGAAAGAATTTCGACTNTGCTGCTTGAAG
TGCGTTTTGTTCATGATATTGTAGGAAAGCTTCTGCAATTACGACCATTA
GTGCTAAACCGATCGGTGCCGAATTCTGAAGTCGGTACAGTTTATCATTC
CACAGGAAGTAACATTTCGATAGACAAAGTTCAATCAAAGTT Run BLAST on NCBI protein sequence of TCONS_00014824-protein >TCONS_00014824-protein ID=TCONS_00014824-protein|Name=TCONS_00014824-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
TLIELCLSKCYFLWNDKLYRLQNSAPIGLALMVVIAEAFLQYHEQNALQA
AXSKFFQTLKRIKDLLTELRPILSAEHMNIIQTVTDKSETTSFLQWKERL
KTKFEKLSPTNDRPNITIEQKTIKPVTLNLCNDPLPDHHRELLDLGPKFV
PTQTRIPYLDIISKTESTALKIKYATKEDTVPMKLRQDVLRDLKMTKPPK
NNLDSRQRKALKELKSDNQNVIYPFDKGAGLVRIDRDDAIAKIEEQLGNT
EIITKDPTSTLARKFQNALRPLHQAGKFTDKEYKKLYPSDPIPPRMYGTI
KAHKPEKNYPMRVVVSTIGTPSYGTSEYLVKIIQPTLNKNNTRLKNSYTF
AELTRSWDVDPDEIQVSYDVVNLYPTVPVEEATNIIVQMLENDHDLP Run BLAST on NCBI transcript from alignment at sc0000198:120656..121847 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014824 ID=TCONS_00014824|Name=TCONS_00014824|organism=Clytia hemisphaerica|type=transcript|length=1192bp|location=Sequence derived from alignment at sc0000198:120656..121847 (Clytia hemisphaerica)
AACTTTGATTGAACTTTGTCTATCGAAATGTTACTTCCTGTGGAATGATA
AACTGTACCGACTTCAGAATTCGGCACCGATCGGTTTAGCACTAATGGTC
GTAATTGCAGAAGCTTTCCTACAATATCATGAACAAAACGCACTTCAAGC
AGCANAGTCGAAATTCTTTCAAACGTTAAAACGAATCAAAGATCTTCTGA
CTGAACTTCGACCCATACTATCGGCTGAACATATGAACATTATACAGACT
GTCACCGATAAGTCAGAGACAACATCCTTTCTCCAGTGGAAAGAACGTTT
GAAAACGAAATTCGAAAAACTGTCACCAACAAACGATCGACCAAACATCA
CCATCGAGCAAAAAACGATCAAACCGGTTACGTTAAACCTCTGCAATGAC
CCGTTGCCAGACCACCATCGTGAGCTACTCGACCTTGGACCAAAGTTTGT
ACCAACCCAAACGCGCATCCCGTACCTCGACATCATTTCGAAGACCGAGT
CAACTGCACTTAAAATCAAATACGCGACCAAAGAAGATACAGTACCAATG
AAACTTCGACAAGACGTGTTGCGCGATCTTAAAATGACAAAACCACCTAA
AAACAATCTTGATTCTCGACAACGAAAAGCACTCAAAGAACTTAAATCCG
ATAACCAGAATGTTATTTACCCATTTGACAAAGGTGCTGGTCTTGTCAGA
ATCGATAGAGATGATGCTATCGCGAAAATCGAAGAACAACTCGGCAACAC
GGAAATCATCACAAAAGATCCAACATCGACATTGGCACGAAAGTTTCAGA
ATGCACTTCGACCCCTTCACCAAGCTGGGAAGTTCACTGATAAAGAGTAC
AAAAAACTGTATCCATCCGATCCGATACCACCTCGAATGTACGGAACCAT
AAAAGCTCATAAACCGGAAAAGAATTACCCTATGAGAGTGGTAGTTTCAA
CTATCGGTACTCCATCGTACGGAACTTCAGAATACCTTGTGAAAATTATT
CAACCAACTCTAAACAAAAACAACACAAGGCTCAAAAACTCGTACACATT
CGCTGAGCTCACTAGATCCTGGGACGTTGACCCCGATGAAATTCAAGTGT
CGTATGACGTAGTAAACCTCTATCCGACAGTACCTGTAGAGGAAGCTACT
AACATAATCGTCCAGATGCTTGAAAACGATCACGACCTACCA Coding sequence (CDS) from alignment at sc0000198:120656..121847 >TCONS_00014824 ID=TCONS_00014824|Name=TCONS_00014824|organism=Clytia hemisphaerica|type=CDS|length=1191bp|location=Sequence derived from alignment at sc0000198:120656..121847 (Clytia hemisphaerica)
ACTTTGATTGAACTTTGTCTATCGAAATGTTACTTCCTGTGGAATGATAA
ACTGTACCGACTTCAGAATTCGGCACCGATCGGTTTAGCACTAATGGTCG
TAATTGCAGAAGCTTTCCTACAATATCATGAACAAAACGCACTTCAAGCA
GCANAGTCGAAATTCTTTCAAACGTTAAAACGAATCAAAGATCTTCTGAC
TGAACTTCGACCCATACTATCGGCTGAACATATGAACATTATACAGACTG
TCACCGATAAGTCAGAGACAACATCCTTTCTCCAGTGGAAAGAACGTTTG
AAAACGAAATTCGAAAAACTGTCACCAACAAACGATCGACCAAACATCAC
CATCGAGCAAAAAACGATCAAACCGGTTACGTTAAACCTCTGCAATGACC
CGTTGCCAGACCACCATCGTGAGCTACTCGACCTTGGACCAAAGTTTGTA
CCAACCCAAACGCGCATCCCGTACCTCGACATCATTTCGAAGACCGAGTC
AACTGCACTTAAAATCAAATACGCGACCAAAGAAGATACAGTACCAATGA
AACTTCGACAAGACGTGTTGCGCGATCTTAAAATGACAAAACCACCTAAA
AACAATCTTGATTCTCGACAACGAAAAGCACTCAAAGAACTTAAATCCGA
TAACCAGAATGTTATTTACCCATTTGACAAAGGTGCTGGTCTTGTCAGAA
TCGATAGAGATGATGCTATCGCGAAAATCGAAGAACAACTCGGCAACACG
GAAATCATCACAAAAGATCCAACATCGACATTGGCACGAAAGTTTCAGAA
TGCACTTCGACCCCTTCACCAAGCTGGGAAGTTCACTGATAAAGAGTACA
AAAAACTGTATCCATCCGATCCGATACCACCTCGAATGTACGGAACCATA
AAAGCTCATAAACCGGAAAAGAATTACCCTATGAGAGTGGTAGTTTCAAC
TATCGGTACTCCATCGTACGGAACTTCAGAATACCTTGTGAAAATTATTC
AACCAACTCTAAACAAAAACAACACAAGGCTCAAAAACTCGTACACATTC
GCTGAGCTCACTAGATCCTGGGACGTTGACCCCGATGAAATTCAAGTGTC
GTATGACGTAGTAAACCTCTATCCGACAGTACCTGTAGAGGAAGCTACTA
ACATAATCGTCCAGATGCTTGAAAACGATCACGACCTACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014824-exon-sc0000198-1491911889:120656..121847 | TCONS_00014824-exon-sc0000198-1491911889:120656..121847 | Clytia hemisphaerica | exon |
| TCONS_00014824-exon-sc0000198-1510915933:120656..121847 | TCONS_00014824-exon-sc0000198-1510915933:120656..121847 | Clytia hemisphaerica | exon |
| TCONS_00014824-exon-sc0000198-1575043694:120656..121847 | TCONS_00014824-exon-sc0000198-1575043694:120656..121847 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000198 | supercontig | sc0000198:120656..121847 . |
Blast
The following BLAST results are available for this feature:
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