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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014847 ID=TCONS_00014847|Name=TCONS_00014847|organism=Clytia hemisphaerica|type=transcript|length=2813bp
AAACAAATGAGgaactttattatttgaaaacaGTTggtaaaaactgtttt
gataaaaaaacatgaaaacatttttaaagggTACGTTAACTTGTTAGAAG
GGCTTATGAAAAAAAGGTGCGAAGGGGAAATCAAAATGATGATTTCGTTT
ATTTTATCAGCAggtaatgaaaacaaaaactgtTGATTATACAGTAATTA
AGTCCTTAATTTTTCTTCTGTATCTATCCTTGTAGTTAATAAAACAATAA
TAGCATAAGAAATCAAAACATAAAGTATAGAGATATAGTCATCAAAATTG
GTGGTGTTATAAGGTACAAATAAGGCTGAAAAGATTCATTGGATAAACAT
TTTTGGTGGATACAACTTGAAGGTTGTTTTGAATCTAAACCATGGTCGCA
GTCGCGCATAATGAAACATTAATACACGCTCGTGAACTTAACGAAGGACT
TGTTATGCCAGGGATGAAGTTGGACGCACACACCACACTTGTTGTGCCTT
CTTACGAAGGAGAGGAACTTggtaaagaaaatttatttgatgATAATAAA
ATTACAAGACAAGATTCAGGTTATGATCAAATAGATGACTCTGCACCACG
AGATAAAACATATCAAGAACAAGAGGAGATTTTGAGGAGAGTGGATGTAG
ACGAAACGTCCAGTGATAGCGGGTTAAACGAAGAAAATTTGGACGAAgaa
gaatttgaaaaagaagaaagcgATCGTTTGGTGATGATGGATGAGAATAT
TGACGTTGACGAAGGAGTGATGACTTCTAAAGAAATCAAtgcagaaaatg
aaaaattacgaCAACAATCGCTCGACGGCCAGGTCGTTATTTACGAAAAT
GGAACACCTATTCTCAAAGTGGAAAGTGGAACAACATTAGAAGTGGTCAA
ACTTTTATACGGTACCGAAAGATCATCACAAGACAATCTCATTGGTGTTC
GGCCACGGCAAAAAGGAGCTTCTATCCCTTGTATTATCACATTGAAAGAT
TCGAgactcgaagaaaattcttatgacgtcatcacaaaagGGGGTCCAGC
CCGTAACTCAttacaaaatgacgtcacatcGAACGAGGATTGCTCCACCA
CAAGGTGTATCGAATGTTCACGTGAATCATGGAAAACAAAGAGATACACA
TCTGTTGGAATGAACACAGAAATCAGTATCAATCCTCTCCTCGAGAATGA
TGCAACTCGTTCCATCACAGCCGGTGTCACTAAACAGAAATCTTCACAAA
GTAAAGACCACGCCCCTCCTGCACCCAAAAGAGGGCGCCCACCCTTGAAC
AGACAACCAGCATACGCTAATGTGCATCCAAAAGAATTCATCGTTGCACC
CATTCCAGGAATGGCACCACCATCCTCTGAAATGGAATACCGTCATTACA
GACGCGCTCAATCTCCGCGGCGTACCGCACCGGCGTTCGCGCACACTAAA
ATCTACCCTCCATCAGTAGATTTGGATAATGTTCCATATGAACCAATCAG
AGCAATTCACCACCCCATCCCTCCACCACACCATCAAGCAAGGCGTCTCT
CTCCTCCACTCAGAATGGTAAAAATGGAAAGTGAACGTCATTCACCACCC
ATGCCGCCCAGCAGATACGCCCGAGCTCGCTCGCCCATTCCTTACAAGGG
TGGGTACGCTCGAGAAGAGGAAAGACCTCGTGAAATTTATCGTGATTTCC
ACTCCTCACAAATGAAAGGTGAAGATAGCAAACGAAGGAGATGGAGCCCA
AAATATTATCCTTATGAGCTTCCACCGCCACCAGGCGCCCTTGTTATTCC
TCAACCACCCTACCCAACGCCTTCACGCCAACAAACATCCGCTCCTAAAC
AAAAGGAAGATCAAGAGCCACAAGTGTACGTTCTTCCTGAAGACTTTGAT
ATGGAAAAAGATCCTTTCGATCCAGTCTCTATGACGTCACAAGACAGCAA
AGATTCCACAGATTCCAACATAAGTAAACAAAGCGAAAGTGTGCGATCAC
CTGATACTCAACCACCTGCCACTCAATCACCTGCCACTCAATCACCTGCC
ACGATGTCTTCTCCTAAAGCGAAAACAACAGAGACCACGCGACCTCCCCA
ACCACTCCTTGAAGGAGCACCGCCAGGCGAACATAAACTCTCATGTAAAA
TCTGTAAACAAAGTTTCCCTACCAAAAGCACATTATACAAACATTTGCGT
GGTCATTCTTCCGATGAAAAACCTTTCAAATGTAACGAGTGTGGCCAGGG
ATTCACTTTGAGCAGTAACTTACGACAACATCGGATCATCCATAGAGGAT
ACAAGCCTTTCCAATGCGAATATTGTGGCAAGAAATTTATGCGCTCAAAT
GTTTATAAACAACATCGACGAATTCACACGGGAGAACAAATGCATAAATG
CGATCTGTGTCCGAGCGAATTTCTTCAAAAATACGCTCTGGTCAAACATT
TAAAGAAGGTTCATAATATTGAAACTTATGAGAACTAATTGTCCCCAGGG
CCATTTAcattacttttttcattcatttaaaatatttttatttatctttc
ttcaaaaacaaacttATGTTTATATCACTATTTTACATTTCTTCTGACTT
ggtaaaattgattttacttgagttttaaaaatatttaggtaTTTTAGTCA
ccgaaaacgaaaacgaaaaagttttattattttatattttagcatatTTA
TACTTTTGTTTCTATGAACCTTTCTGTAAAtaatatttaaaacattttta
atccTTTCAAGAATTGAGCCTCAATTTTTCAAAGGTtcttatttttaatt
tgttttttcagat Run BLAST on NCBI protein sequence of TCONS_00014847-protein >TCONS_00014847-protein ID=TCONS_00014847-protein|Name=TCONS_00014847-protein|organism=Clytia hemisphaerica|type=polypeptide|length=698bp
MVAVAHNETLIHARELNEGLVMPGMKLDAHTTLVVPSYEGEELGKENLFD
DNKITRQDSGYDQIDDSAPRDKTYQEQEEILRRVDVDETSSDSGLNEENL
DEEEFEKEESDRLVMMDENIDVDEGVMTSKEINAENEKLRQQSLDGQVVI
YENGTPILKVESGTTLEVVKLLYGTERSSQDNLIGVRPRQKGASIPCIIT
LKDSRLEENSYDVITKGGPARNSLQNDVTSNEDCSTTRCIECSRESWKTK
RYTSVGMNTEISINPLLENDATRSITAGVTKQKSSQSKDHAPPAPKRGRP
PLNRQPAYANVHPKEFIVAPIPGMAPPSSEMEYRHYRRAQSPRRTAPAFA
HTKIYPPSVDLDNVPYEPIRAIHHPIPPPHHQARRLSPPLRMVKMESERH
SPPMPPSRYARARSPIPYKGGYAREEERPREIYRDFHSSQMKGEDSKRRR
WSPKYYPYELPPPPGALVIPQPPYPTPSRQQTSAPKQKEDQEPQVYVLPE
DFDMEKDPFDPVSMTSQDSKDSTDSNISKQSESVRSPDTQPPATQSPATQ
SPATMSSPKAKTTETTRPPQPLLEGAPPGEHKLSCKICKQSFPTKSTLYK
HLRGHSSDEKPFKCNECGQGFTLSSNLRQHRIIHRGYKPFQCEYCGKKFM
RSNVYKQHRRIHTGEQMHKCDLCPSEFLQKYALVKHLKKVHNIETYEN Run BLAST on NCBI transcript from alignment at sc0000200:65368..72750+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014847 ID=TCONS_00014847|Name=TCONS_00014847|organism=Clytia hemisphaerica|type=transcript|length=7383bp|location=Sequence derived from alignment at sc0000200:65368..72750+ (Clytia hemisphaerica)
AAACAAATGAGgaactttattatttgaaaacaGTTggtaaaaactgtttt
gataaaaaaacatgaaaacatttttaaagggTACGTTAACTTGTTAGAAG
GGCTTATGAAAAAAAGGTGCGAAGGGGAAATCAAAATGATGATTTCGTTT
ATTTTATCAGCAggtaatgaaaacaaaaactgtTGATTATACAGTAATTA
AGTCCTTAATTTTTCTTCTGTATCTATCCTTGTAGTTAATAAAACAATAA
TAGCATAAGAAATCAAAACATAAAGTATAGAGATATAGTCATCAAAATTG
GTGGTGTTATAAGGTACAAATAAGGCTGAAAAGATTCATTGGATAAACAT
TTTTGGTGGATACAACTTGAAGGTTGTTTTGAATCTAAACCATGGTCGCA
GTCGCGCATAATGAAACATTAATACACGCTCGTGAACTTAACGAAGGACT
TGTTATGCCAGGGATGAAGTTGGACGCACACACCACACTTGTTGTGCCTT
CTTACGAAGGAGAGGAACTTggtaaagaaaatttatttgatgATAATAAA
ATTACAAGACAAGATTCAGGTTATGATCAAATAGATGACTCTGCACCACG
AGATAAAACATATCAAGAACAAGAGGAGATTTTGAGGAGAGTGGATGTAG
ACGAAACGTCCAGTGATAGCGGGTTAAACGAAGAAAATTTGGACGAAgaa
gaatttgaaaaagaagaaagcgATCGTTTGGTGATGATGGATGAGAATAT
TGACGTTGACGAAGGAGTGATGACTTCTAAAGAAATCAAtgcagaaaatg
aaaaattacgaCAACAATCGCTCGACGGCCAGGTAATATgatgtttttta
tgagaacataattttttgaagctttctgatgttcttaactttttcattta
agcctaaaaatgttctttaaatgttcttattttcatcatttttgtgCGAT
TTCCTAATGAATTGAGTGTTCTAGAGTcggcgaagccttaaaatgttctt
aacttacatagtttgttcctataaaaaaagatAGATCTTCTTgcgaaaac
ttttaattttcacgcaagtacctttttgactttttcttggtGCATTCAAA
GTGTTTTATTTGAAGGATCTCTCTACGCAAATCTAATATTTGTCCCCATT
TCTCTGATTcaattgaaaagatattttgaagtGTTTCGTAAATAAGCTAA
TATAGGTATTTGACGtacaatttctttttgttttcgaaGGGCATCTGTTT
TTTCATTCATAGTTTTGTTTGTCCATCTTCTAAAGAAATTCAAATAAATC
TTTTGCAATGcattagaaatagaaataaaggGCGTGGTGTGATTTCCCAC
AATGCATTTGGATAGGAATCTTTTGTTACGACCAGCTCTCTGCATGCATA
GCGTACCttcaaaatataatttattGGAAAGGCTTTCATTTTTACTGCTT
GTTTTGACACTCATGTGGATTCTAAAGAAAAGtgtctttttgataaaaat
attttggggcAAAAAATATgcctcaaaaatatatttgatttcCACACCTT
TTTTGggcacttttttttcaaaattgacatATGGTATCCCATCGGGGACC
CTCTTTATATTTcgctgaaaaatttgaatttgaaatttttaatttgatga
agaaaaaatattttccaagacCTCTTAGGTTTCAAGTTAATCTCAAAGCT
TTTTTACTTCCAAAGCTATGGGAAGTTCTTGGAGGGTAATTTAGGATTTA
TACGAGTGCCTTTCTTTCTTGATACTTCAATAACGGTACCTATACGAGAT
TAATTCTTTTCTTTCGAAagagttttgtttgttttttcgcGGTATAAGAT
CCTTTTGCgagtttttctttgcttttgtTTAGATTCAAAAAGGATACcga
cactttttaaaaattgcatCAATGAACAAAAAAGATtcataaaaagtaat
acaaAAAGGAAACATATGCCCCTATTTTTTTATGCTTTACGAAATCAAAA
ACCCGGGGTCAAGGTGTATGTGAAGTCTTTTGAATTCATTTGCATAATTG
TGTTAACTCTTCCCTTGCTAAAtctaatctttataaatttattaaatttt
caaaacttttgacgtCACGAGGTATTGCATTAAAAACTTTGTATTTCCTT
TACACATACATATCGCTGAAAACTAAAGGAACTCCAAAAGGTATCACCTC
AGCATTCCATATCTTGAATTGTGTATACCAAGTTCCTCATCGAGGCGGAG
TAGACGGTGACGGGACCTCTCTGAACTCCACACTTTCCCGCATTTACCAT
GGCGTCTTTCTTATTGGATTCGAAATACTTTAATTCAACGAGAAGATAGG
TTAAAACCAAAACTTAAGTTGCGTGTGCTAAAGTCTTCATGCAAAAAGCG
TAGCTTTCGGTAATTTGTTTGAGGCATTTTGACTGTGAGAGATTATTAAA
AGCTGTAAGAAAAAGTGCTCAAGGGGTATATGTAGTGAGAGAAGCTTAAT
TGAAGTAGCAATCAATTGCCTCTTTAAAAATCCACTTGGCTTGATATCAC
TTTTTCACTGTTTGACTCTTaaagtttgtttgtttcttgatacttgaatc
gaaacaaaaacatattttAACGGCATCTCGGCCTTGCATTCGCTTCATTC
GCAATCTTGTCGTTGAGAACTTGCTCTTTAAAAAAGGAAGTGTTTTTGTG
CATCAAAATGATCCTAGAATGGCCAATGGTAAGGGATTCTTTATTGTGTA
GTCTTTTCAAGGGTGGCGTTGCATTGTTTAATGACCAACTAGCGGTCATT
GCACTAAAACATCGTTCTGTATCTACTAGCTTCGAGAAAGAACTTGAGAA
TGTCTTACTTTCGCAACAATGTAAAGTAAATTACAATTTTGTCACATGAT
ATAGACCTTTCAAGAAGCGTAATACTAACGGCTAGCGACGCACAAAATAA
GAATTTGTGAATAGCGAATGAGTTGCCAAAAGTCTCATATACGCTGGATA
GGAAGTTAGTGGTTTGACACTTATATACAAGCACAATATATGAGCTCAAG
AACTATCTTTATATTATGATGATGCGTCGCCAAGTCTCTCCGAAGTTTTT
GAGTCCCTTcctaaaatttcatcatttttgttaAACTAAGCCAATAATCA
TTTACGCTGAACTTAAAAAGCATCAACTGAGTGATTGCcaacttttgata
ttttagaGGTATGTGATGGGTATACAGATTTCCTGCACAAGAACAGTTTT
AAGGCTTATTTCATGTAGGACTTAGTCAAATCTCATTCCCGAACTGTTTC
CAAATATAGACGTGTTTCAGGGAAGCAGTGCCAAATCATGCTTTACTGTT
TGTTTTGAGATTGAAGTGCCAAAATAGGTTTTATTGTATGATTGTTTCAT
TCTCGTGTGTACTTTTAGGATTCGAGAGTTTTTGCTTTTCAGTTTAGTCG
GCATTCTTTCACACTGCTGCATTTAAACCTTTAAATCATTTTGAAAGGGA
TTAGCTCACAAATAATAATATGGTATTTTTGATCAGGGTTAATATTTGTT
TAAATGCATAATCGCCTTTGTGTTTTATTCCGTACTAAAACTTTATGAAA
GAAGATTTAGGGTAGGGTAAAGGAAAAGGCGCAAAAGCGTTAAGATCAAT
ATATACCATAGGAAATGAAGTTCTCAATACACTTTAACAAACACTTTTTG
TATCAAGATAGAATCATCAGAAAAGTCAACAATTCTAAATCTTAAGACTG
CCTGTAGTTAGATCTTTAAGAGTATCAAAAAGCTCCTTGTTTTTCCGGCA
GTaaataaatagaaagaaaaGAACGGAATTTGCGCTGCGATAAGCTATGG
CATTTAAGTGATTAACATACTATTTTGTTATGTTCTGTGTTTATTCCTGG
GTTTTTTTGTCAGAGATCACACTAACGTGCGACATGTACAAAATACCTTT
TTTCGCGAAAGACCGCTAACAAATAAAAAGATCAAGCAAAATGTATTTCA
CGATGCGACTTGTTTATTCAAGGAACTGATCATTTTTTTTGTAGAGTTGG
TATTAAAAGTCTAAAAAGTCTTTCACAAATGCCGACTTGATAAATAAAAT
GTACCCTTTTGAATTAGAAAGGTTTATAATGTCAGCTTGTTACCTATTCG
CTAGATTTTGAATACGCTTCACTAAAACTTAATTTACTTTTGNATAATGT
CAGCTTGTTACCTATTCGCTAGATTTTGAATACGCTTCACTAAAACTTAA
TTTACTTTTGGTAAAAGATACCACGTAAATTTCTTTTGCTTCCAACAAAA
ACACTAAACTTGCGTTAAGGTTTTCTGACACGGTGTAACACAAGAAATGG
GGCTTGCCAAAACGAATTGTGACGTCATCGAATCAGGCAATATTGTATGA
ATTGAGTGTTTTTTTATCAGGAGTTACAGGTTTCAGAGAGGCTTATTTTA
AATTAATGTGAAAGTGGTTTAAGTTGactgcccagctggcacacacatgt
tttttcgacgtttatctaacgttcacaacgtccatataacgttagatgaa
cgttgaaacaacgttgtgtgccagttggcTGAGTCTTTTTTTCTTCTACT
CATTAGAAAAggacttcattttttatttgtgaTTCGtttgtttttggtcc
aaatcCCCTTTGTTATTTGTTGTCATGATGGCTCATTATAGATGGGAAAG
GgtcgaagaaaaaaatgtaagtTATTAACTCAAGAGAATCCTAAGAGGAA
TTGAGTTAAGTGTAACTCAATCTCATTCCCTGTGTATTattagctttttg
atgcttacctTTTGCGCCAGGGTATATTCTCTGGCGTGCATCACGgtcca
tcagtaacgtaaataaagcctggaatacacgggaaCGAGGTTACCTCAAC
CTAACTTAATATGGATCTCTAGCTTATGAATATGGGATCAGGGTCTTCGC
TGTAAtcttaaaataatcaaattaccTTTTTCTCGACAGGTCGTTATTTA
CGAAAATGGAACACCTATTCTCAAAGTGGAAAGTGGAACAACATTAGAAG
TGGTCAAACTTTTATACGGTACCGAAAGATCATCACAAGACAATCTCATT
GGTGTTCGGCCACGGCAAAAAGGAGCTTCTATCCCTTGTATTATCACATT
GAAAGATTCGAgactcgaagaaaattcttatgacgtcatcacaaaaggTA
ACTCTTCCATTATACTTTAAAGCTTAATCTTCNATtcttatgacgtcatc
acaaaaggTAACACTTCCATTATACTTTAAAGCTTAAATTAAACTTCAAG
GCAATCAAGACGAAATCTAGGAATCGTATTTCTTCCCTAAGGGCTAAGAT
ATTTTAGGAAAATAAACCAGTATCGTTTcttgtcaattttttctttcgat
ttaatattcattattttcgttTGGTTGTTTataaagtttgaaacaaaaca
acaaaaactttGTCCAATAATCCCTCGATGACGTTTCTGCTCAATAATCT
AAGAGATAAACTTCTAATATAAAGTGTTGCAgtgtgttttgttttattta
cgTATGTGAATCCCCCATGTATCCTCTGTTTCTGAACTATAATTCTATTT
TCTTCAACAGGGGGTCCAGCCCGTAACTCAttacaaaatgacgtcacatc
GAACGAGGATTGCTCCACCACAAGGTGTATCGAATGTTCACGTGAATCAT
GGAAAACAAAGAGATACACATCTGTTGGAATGAACACAGAAATCAGTATC
AATCCTCTCCTCGAGAATGATGCAACTCGTTCCATCACAGCCGGTGTCAC
TAAACAGAAATCTTCACAAAGTAAAGACCACGCCCCTCCTGCACCCAAAA
GAGGGCGCCCACCCTTGAACAGACAACCAGCATACGCTAATGTGCATCCA
AAAGAATTCATCGTTGCACCCATTCCAGGAATGGCACCACCATCCTCTGA
AATGGAATACCGTCATTACAGACGCGCTCAATCTCCGCGGCGTACCGCAC
CGGCGTTCGCGCACACTAAAATCTACCCTCCATCAGTAGATTTGGATAAT
GTTCCATATGAACCAATCAGAGCAATTCACCACCCCATCCCTCCACCACA
CCATCAAGCAAGGCGTCTCTCTCCTCCACTCAGAATGGTAAAAATGGAAA
GTGAACGTCATTCACCACCCATGCCGCCCAGCAGATACGCCCGAGCTCGC
TCGCCCATTCCTTACAAGGGTGGGTACGCTCGAGAAGAGGAAAGACCTCG
TGAAATTTATCGTGATTTCCACTCCTCACAAATGAAAGGTGAAGATAGCA
AACGAAGGAGATGGAGCCCAAAATATTATCCTTATGAGCTTCCACCGCCA
CCAGGCGCCCTTGTTATTCCTCAACCACCCTACCCAACGCCTTCACGCCA
ACAAACATCCGCTCCTAAACAAAAGGAAGATCAAGAGCCACAAGTGTACG
TTCTTCCTGAAGACTTTGATATGGAAAAAGATCCTTTCGATCCAGTCTCT
ATGACGTCACAAGACAGCAAAGATTCCACAGATTCCAACATAAGTAAACA
AAGCGAAAGTGTGCGATCACCTGATACTCAACCACCTGCCACTCAATCAC
CTGCCACTCAATCACCTGCCACGATGTCTTCTCCTAAAGCGAAAACAACA
GAGACCACGCGACCTCCCCAACCACTCCTTGAAGGAGCACCGCCAGGCGA
ACATAAACTCTCATGTAAAATCTGTAAACAAAGTTTCCCTACCAAAAGCA
CATTATACAAACATTTGCGTGGTCATTCTTCCGATGAAAAACCTTTCAAA
TGTAACGAGTGTGGCCAGGGATTCACTTTGAGCAGTAACTTACGACAACA
TCGGATCATCCATAGAGGATACAAGCCTTTCCAATGCGAATATTGTGGCA
AGAAATTTATGCGCTCAAATGTTTATAAACAACATCGACGAATTCACACG
GGAGAACAAATGCATAAATGCGATCTGTGTCCGAGCGAATTTCTTCAAAA
ATACGCTCTGGTCAAACATTTAAAGAAGGTTCATAATATTGAAACTTATG
AGAACTAATTGTCCCCAGGGCCATTTAcattacttttttcattcatttaa
aatatttttatttatctttcttcaaaaacaaacttATGTTTATATCACTA
TTTTACATTTCTTCTGACTTggtaaaattgattttacttgagttttaaaa
atatttaggtaTTTTAGTCAccgaaaacgaaaacgaaaaagttttattat
tttatattttagcatatTTATACTTTTGTTTCTATGAACCTTTCTGTAAA
taatatttaaaacatttttaatccTTTCAAGAATTGAGCCTCAATTTTTC
AAAGGTtcttatttttaatttgttttttcagat Coding sequence (CDS) from alignment at sc0000200:65368..72750+ >TCONS_00014847 ID=TCONS_00014847|Name=TCONS_00014847|organism=Clytia hemisphaerica|type=CDS|length=6291bp|location=Sequence derived from alignment at sc0000200:65368..72750+ (Clytia hemisphaerica)
ATGGTCGCAGTCGCGCATAATGAAACATTAATACACGCTCGTGAACTTAA
CGAAGGACTTGTTATGCCAGGGATGAAGTTGGACGCACACACCACACTTG
TTGTGCCTTCTTACGAAGGAGAGGAACTTggtaaagaaaatttatttgat
gATAATAAAATTACAAGACAAGATTCAGGTTATGATCAAATAGATGACTC
TGCACCACGAGATAAAACATATCAAGAACAAGAGGAGATTTTGAGGAGAG
TGGATGTAGACGAAACGTCCAGTGATAGCGGGTTAAACGAAGAAAATTTG
GACGAAgaagaatttgaaaaagaagaaagcgATCGTTTGGTGATGATGGA
TGAGAATATTGACGTTGACGAAGGAGTGATGACTTCTAAAGAAATCAAtg
cagaaaatgaaaaattacgaCAACAATCGCTCGACGGCCAGGTCGTTATT
TACGAAAATGGAACACCTATTCTCAAAGTGGAAAGTGGAACAACATTAGA
AGTGGTCAAACTTTTATACGGTACCGAAAGATCATCACAAGACAATCTCA
TTGGTGTTCGGCCACGGCAAAAAGGAGCTTCTATCCCTTGTATTATCACA
TTGAAAGATTCGAgactcgaagaaaattcttatgacgtcatcacaaaagG
GGGTCCAGCCCGTAACTCAttacaaaatgacgtcacatcGAACGAGGATT
GCTCCACCACAAGGTGTATCGAATGTTCACGTGAATCATGGAAAACAAAG
AGATACACATCTGTTGGAATGAACACAGAAATCAGTATCAATCCTCTCCT
CGAGAATGATGCAACTCGTTCCATCACAGCCGGTGTCACTAAACAGAAAT
CTTCACAAAGTAAAGACCACGCCCCTCCTGCACCCAAAAGAGGGCGCCCA
CCCTTGAACAGACAACCAGCATACGCTAATGTGCATCCAAAAGAATTCAT
CGTTGCACCCATTCCAGGAATGGCACCACCATCCTCTGAAATGGAATACC
GTCATTACAGACGCGCTCAATCTCCGCGGCGTACCGCACCGGCGTTCGCG
CACACTAAAATCTACCCTCCATCAGTAGATTTGGATAATGTTCCATATGA
ACCAATCAGAGCAATTCACCACCCCATCCCTCCACCACACCATCAAGCAA
GGCGTCTCTCTCCTCCACTCAGAATGGTAAAAATGGAAAGTGAACGTCAT
TCACCACCCATGCCGCCCAGCAGATACGCCCGAGCTCGCTCGCCCATTCC
TTACAAGGGTGGGTACGCTCGAGAAGAGGAAAGACCTCGTGAAATTTATC
GTGATTTCCACTCCTCACAAATGAAAGGTGAAGATAGCAAACGAAGGAGA
TGGAGCCCAAAATATTATCCTTATGAGCTTCCACCGCCACCAGGCGCCCT
TGTTATTCCTCAACCACCCTACCCAACGCCTTCACGCCAACAAACATCCG
CTCCTAAACAAAAGGAAGATCAAGAGCCACAAGTGTACGTTCTTCCTGAA
GACTTTGATATGGAAAAAGATCCTTTCGATCCAGTCTCTATGACGTCACA
AGACAGCAAAGATTCCACAGATTCCAACATAAGTAAACAAAGCGAAAGTG
TGCGATCACCTGATACTCAACCACCTGCCACTCAATCACCTGCCACTCAA
TCACCTGCCACGATGTCTTCTCCTAAAGCGAAAACAACAGAGACCACGCG
ACCTCCCCAACCACTCCTTGAAGGAGCACCGCCAGGCGAACATAAACTCT
CATGTAAAATCTGTAAACAAAGTTTCCCTACCAAAAGCACATTATACAAA
CATTTGCGTGGTCATTCTTCCGATGAAAAACCTTTCAAATGTAACGAGTG
TGGCCAGGGATTCACTTTGAGCAGTAACTTACGACAACATCGGATCATCC
ATAGAGGATACAAGCCTTTCCAATGCGAATATTGTGGCAAGAAATTTATG
CGCTCAAATGTTTATAAACAACATCGACGAATTCACACGGGAGAACAAAT
GCATAAATGCGATCTGTGTCCGAGCGAATTTCTTCAAAAATACGCTCTGG
TCAAACATTTAAAGAAGGTTCATAATATTGAAACTTATGAGAACTAAATG
GTCGCAGTCGCGCATAATGAAACATTAATACACGCTCGTGAACTTAACGA
AGGACTTGTTATGCCAGGGATGAAGTTGGACGCACACACCACACTTGTTG
TGCCTTCTTACGAAGGAGAGGAACTTggtaaagaaaatttatttgatgAT
AATAAAATTACAAGACAAGATTCAGGTTATGATCAAATAGATGACTCTGC
ACCACGAGATAAAACATATCAAGAACAAGAGGAGATTTTGAGGAGAGTGG
ATGTAGACGAAACGTCCAGTGATAGCGGGTTAAACGAAGAAAATTTGGAC
GAAgaagaatttgaaaaagaagaaagcgATCGTTTGGTGATGATGGATGA
GAATATTGACGTTGACGAAGGAGTGATGACTTCTAAAGAAATCAAtgcag
aaaatgaaaaattacgaCAACAATCGCTCGACGGCCAGGTCGTTATTTAC
GAAAATGGAACACCTATTCTCAAAGTGGAAAGTGGAACAACATTAGAAGT
GGTCAAACTTTTATACGGTACCGAAAGATCATCACAAGACAATCTCATTG
GTGTTCGGCCACGGCAAAAAGGAGCTTCTATCCCTTGTATTATCACATTG
AAAGATTCGAgactcgaagaaaattcttatgacgtcatcacaaaagGGGG
TCCAGCCCGTAACTCAttacaaaatgacgtcacatcGAACGAGGATTGCT
CCACCACAAGGTGTATCGAATGTTCACGTGAATCATGGAAAACAAAGAGA
TACACATCTGTTGGAATGAACACAGAAATCAGTATCAATCCTCTCCTCGA
GAATGATGCAACTCGTTCCATCACAGCCGGTGTCACTAAACAGAAATCTT
CACAAAGTAAAGACCACGCCCCTCCTGCACCCAAAAGAGGGCGCCCACCC
TTGAACAGACAACCAGCATACGCTAATGTGCATCCAAAAGAATTCATCGT
TGCACCCATTCCAGGAATGGCACCACCATCCTCTGAAATGGAATACCGTC
ATTACAGACGCGCTCAATCTCCGCGGCGTACCGCACCGGCGTTCGCGCAC
ACTAAAATCTACCCTCCATCAGTAGATTTGGATAATGTTCCATATGAACC
AATCAGAGCAATTCACCACCCCATCCCTCCACCACACCATCAAGCAAGGC
GTCTCTCTCCTCCACTCAGAATGGTAAAAATGGAAAGTGAACGTCATTCA
CCACCCATGCCGCCCAGCAGATACGCCCGAGCTCGCTCGCCCATTCCTTA
CAAGGGTGGGTACGCTCGAGAAGAGGAAAGACCTCGTGAAATTTATCGTG
ATTTCCACTCCTCACAAATGAAAGGTGAAGATAGCAAACGAAGGAGATGG
AGCCCAAAATATTATCCTTATGAGCTTCCACCGCCACCAGGCGCCCTTGT
TATTCCTCAACCACCCTACCCAACGCCTTCACGCCAACAAACATCCGCTC
CTAAACAAAAGGAAGATCAAGAGCCACAAGTGTACGTTCTTCCTGAAGAC
TTTGATATGGAAAAAGATCCTTTCGATCCAGTCTCTATGACGTCACAAGA
CAGCAAAGATTCCACAGATTCCAACATAAGTAAACAAAGCGAAAGTGTGC
GATCACCTGATACTCAACCACCTGCCACTCAATCACCTGCCACTCAATCA
CCTGCCACGATGTCTTCTCCTAAAGCGAAAACAACAGAGACCACGCGACC
TCCCCAACCACTCCTTGAAGGAGCACCGCCAGGCGAACATAAACTCTCAT
GTAAAATCTGTAAACAAAGTTTCCCTACCAAAAGCACATTATACAAACAT
TTGCGTGGTCATTCTTCCGATGAAAAACCTTTCAAATGTAACGAGTGTGG
CCAGGGATTCACTTTGAGCAGTAACTTACGACAACATCGGATCATCCATA
GAGGATACAAGCCTTTCCAATGCGAATATTGTGGCAAGAAATTTATGCGC
TCAAATGTTTATAAACAACATCGACGAATTCACACGGGAGAACAAATGCA
TAAATGCGATCTGTGTCCGAGCGAATTTCTTCAAAAATACGCTCTGGTCA
AACATTTAAAGAAGGTTCATAATATTGAAACTTATGAGAACTAAATGGTC
GCAGTCGCGCATAATGAAACATTAATACACGCTCGTGAACTTAACGAAGG
ACTTGTTATGCCAGGGATGAAGTTGGACGCACACACCACACTTGTTGTGC
CTTCTTACGAAGGAGAGGAACTTggtaaagaaaatttatttgatgATAAT
AAAATTACAAGACAAGATTCAGGTTATGATCAAATAGATGACTCTGCACC
ACGAGATAAAACATATCAAGAACAAGAGGAGATTTTGAGGAGAGTGGATG
TAGACGAAACGTCCAGTGATAGCGGGTTAAACGAAGAAAATTTGGACGAA
gaagaatttgaaaaagaagaaagcgATCGTTTGGTGATGATGGATGAGAA
TATTGACGTTGACGAAGGAGTGATGACTTCTAAAGAAATCAAtgcagaaa
atgaaaaattacgaCAACAATCGCTCGACGGCCAGGTCGTTATTTACGAA
AATGGAACACCTATTCTCAAAGTGGAAAGTGGAACAACATTAGAAGTGGT
CAAACTTTTATACGGTACCGAAAGATCATCACAAGACAATCTCATTGGTG
TTCGGCCACGGCAAAAAGGAGCTTCTATCCCTTGTATTATCACATTGAAA
GATTCGAgactcgaagaaaattcttatgacgtcatcacaaaagGGGGTCC
AGCCCGTAACTCAttacaaaatgacgtcacatcGAACGAGGATTGCTCCA
CCACAAGGTGTATCGAATGTTCACGTGAATCATGGAAAACAAAGAGATAC
ACATCTGTTGGAATGAACACAGAAATCAGTATCAATCCTCTCCTCGAGAA
TGATGCAACTCGTTCCATCACAGCCGGTGTCACTAAACAGAAATCTTCAC
AAAGTAAAGACCACGCCCCTCCTGCACCCAAAAGAGGGCGCCCACCCTTG
AACAGACAACCAGCATACGCTAATGTGCATCCAAAAGAATTCATCGTTGC
ACCCATTCCAGGAATGGCACCACCATCCTCTGAAATGGAATACCGTCATT
ACAGACGCGCTCAATCTCCGCGGCGTACCGCACCGGCGTTCGCGCACACT
AAAATCTACCCTCCATCAGTAGATTTGGATAATGTTCCATATGAACCAAT
CAGAGCAATTCACCACCCCATCCCTCCACCACACCATCAAGCAAGGCGTC
TCTCTCCTCCACTCAGAATGGTAAAAATGGAAAGTGAACGTCATTCACCA
CCCATGCCGCCCAGCAGATACGCCCGAGCTCGCTCGCCCATTCCTTACAA
GGGTGGGTACGCTCGAGAAGAGGAAAGACCTCGTGAAATTTATCGTGATT
TCCACTCCTCACAAATGAAAGGTGAAGATAGCAAACGAAGGAGATGGAGC
CCAAAATATTATCCTTATGAGCTTCCACCGCCACCAGGCGCCCTTGTTAT
TCCTCAACCACCCTACCCAACGCCTTCACGCCAACAAACATCCGCTCCTA
AACAAAAGGAAGATCAAGAGCCACAAGTGTACGTTCTTCCTGAAGACTTT
GATATGGAAAAAGATCCTTTCGATCCAGTCTCTATGACGTCACAAGACAG
CAAAGATTCCACAGATTCCAACATAAGTAAACAAAGCGAAAGTGTGCGAT
CACCTGATACTCAACCACCTGCCACTCAATCACCTGCCACTCAATCACCT
GCCACGATGTCTTCTCCTAAAGCGAAAACAACAGAGACCACGCGACCTCC
CCAACCACTCCTTGAAGGAGCACCGCCAGGCGAACATAAACTCTCATGTA
AAATCTGTAAACAAAGTTTCCCTACCAAAAGCACATTATACAAACATTTG
CGTGGTCATTCTTCCGATGAAAAACCTTTCAAATGTAACGAGTGTGGCCA
GGGATTCACTTTGAGCAGTAACTTACGACAACATCGGATCATCCATAGAG
GATACAAGCCTTTCCAATGCGAATATTGTGGCAAGAAATTTATGCGCTCA
AATGTTTATAAACAACATCGACGAATTCACACGGGAGAACAAATGCATAA
ATGCGATCTGTGTCCGAGCGAATTTCTTCAAAAATACGCTCTGGTCAAAC
ATTTAAAGAAGGTTCATAATATTGAAACTTATGAGAACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014847-exon-sc0000200-1491911889:65368..66199 | TCONS_00014847-exon-sc0000200-1491911889:65368..66199 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1510915933:65368..66199 | TCONS_00014847-exon-sc0000200-1510915933:65368..66199 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1575043694:65368..66199 | TCONS_00014847-exon-sc0000200-1575043694:65368..66199 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1491911889:70357..70564 | TCONS_00014847-exon-sc0000200-1491911889:70357..70564 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1510915933:70357..70564 | TCONS_00014847-exon-sc0000200-1510915933:70357..70564 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1575043694:70357..70564 | TCONS_00014847-exon-sc0000200-1575043694:70357..70564 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1491911889:70978..72750 | TCONS_00014847-exon-sc0000200-1491911889:70978..72750 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1510915933:70978..72750 | TCONS_00014847-exon-sc0000200-1510915933:70978..72750 | Clytia hemisphaerica | exon |
| TCONS_00014847-exon-sc0000200-1575043694:70978..72750 | TCONS_00014847-exon-sc0000200-1575043694:70978..72750 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000200 | supercontig | sc0000200:65368..72750 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00014847 vs. Swiss-Prot (Human)
Match: ZN764 (Zinc finger protein 764 OS=Homo sapiens GN=ZNF764 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.756e-26 Identity = 71/200 (35.50%), Postives = 107/200 (53.50%), Query Frame = 2
Query: 1907 KDPFDPVSMTSQDSKDSTDSNISKQSE---SVRSPDTQPPATQSPATQSP-ATMSSPKAKTTETTRPP---QPLLEGAPP---GEHKLSCKICKQSFPTKSTLYKHLRGHSSDEKPFKCNECGQGFTLSSNLRQHRIIHRGYKPFQCEYCGKKFMRSNVYKQHRRIHTGEQMHKCDLCPSEFLQKYALVKHLKKVHNIET 2476
+DP T D DS + +Q E ++ PD P A SP +SP A + P + ++ P +P L PP + + C +C +SF +STL +H+ H+ EKPF C +CG+GF +S+L +HR IHRG +P +C CG+ F + + H R+HTGE+ + C C F Q AL +H ++VH+ ET
Sbjct: 90 QDPEVAKCQTQTDPADSRNKKKERQREGTGALEKPD--PVAAGSPGLKSPQAPSAGPPYGWEQLSKAPHRGRPSLCAHPPVPRADQRHGCYVCGKSFAWRSTLVEHVYSHTG-EKPFHCTDCGKGFGHASSLSKHRAIHRGERPHRCLECGRAFTQRSALTSHLRVHTGEKPYGCADCGRRFSQSSALYQH-RRVHSGET 285 HSP 2 Score: 86.6557 bits (213), Expect = 7.983e-18 Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 2
Query: 2126 GEHKLSCKICKQSFPTKSTLYKHLRGHSSDEKPFKCNECGQGFTLSSNLRQHRIIHRGYKPFQCEYCGKKFMRSNVYKQHRRIHTGEQMHKCDLCPSEFLQKYALVKH 2449
GE C C + F S LY+H R HS E PF C +CG+ F S+LR+H H G KP+ C CG+ F +S+ HRR H+GE+ + C C F QK A+ KH
Sbjct: 255 GEKPYGCADCGRRFSQSSALYQHRRVHSG-ETPFPCPDCGRAFAYPSDLRRHVRTHTGEKPYPCPDCGRCFRQSSEMAAHRRTHSGEKPYPCPQCGRRFGQKSAVAKH 361
The following BLAST results are available for this feature:
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