TCONS_00014945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014945
Unique NameTCONS_00014945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3226

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014945 ID=TCONS_00014945|Name=TCONS_00014945|organism=Clytia hemisphaerica|type=transcript|length=3226bp
AAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATTTTTCGAGAATTT
TGATAACCTCTGCACATTGGAATATACCGCGTTCTGTATTTTGTCATGAA
GAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAATAAAGATCTA
CTGGTGACGCTATGTTTTTGAAGTTGGAATCGGCTCGAAAGAATGAAAAA
GACGAAGAGAACATTCCCTTAACGAGTAACAGATCGACAATACACTCGGG
GCGTGAACAATTTCCACCTCCAGCCGGGCGGAATTTATATACACCGCCTT
TAATTGTCAAAACACCGGATGAAGACTATCGAAAACAGTTCAACTCAACA
TCAGCAAAAGACGGTACTGATATAGGCTATCTGATGCGTTCTCCAAAACG
ACAAAATGGTGGACCGTCCAATAGAAATCATCGAACCAGGGACCATGTTG
ATGCCGTCAACTTTCGAAGACGAAACAAACAAAACCAAAGATCCGTTCAA
AACAAACGATCCGTTATTGAAGAGCCTTTCAGACGCCATAATTACAAAAG
CCCGGCGCCTCTCGATGAAGCACGCATTTCAGTCAAGCAGCGCACGCTTG
AAGAACGCGGAGAAATCGAAGGGCATGATCTTTTGACAGGCAATCGTGGA
GCATCGATGGGGATGTTGGATAGCGATGGGAACAGTAGCGACAATGGCGA
AACTACATTACGAAAAAAGAAGAATACATATATCAAGAGCAAAGAACTCA
TCACTTATTTTGCACAACTCGCTCGAAGTAAGAACCCTACCGATGCAATA
GATCTCAAGATGGTGGACCGTCTCATTCGCAATGGTGCCAACCTCAACGT
TACCGATAAATACGGTCAAACGGTCATGCATGAAGTGGCAAAGAACTGGC
ACACTGACGTCGCAAAATATCTCATCAAGCGGGGCGCTATTTACGACGCC
AAAGACCGTTATGGGCGGACACCCCTTCATCTTGCATCGGCTGTGGGACA
TGTAGAAATGATTGATTTTTTAGTGGGTCAAGATCACGAGAAACTAAAAG
ACGTGACGAAGGACGAGCGTCAGACAGCGCTTCATTACGCAGCAAAGAAC
AACTCAGTAGGAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCGTCGATGAA
CGATCGAGACTATCGATTACGTACTGCTCTCCATCTCGCTGCTGAAAACG
GACGTATTGAAGCTGCGCGATATTTATTGAGCAAGAACGCTCCATGTGCA
GTGTACGATGATCAAGGTGTTTCATGTCTCTCCATCATGGTTCAGAAGAT
GCCTGGTGTAGCCTTCCTGGCCTTGCAACAATTCTACGCTGAAGATCCTG
CCAATAGAAAACTATATTGCTATTTGAATTACTTGGAGAAGAAGTTGTTA
GCAGATGAGGAGTTGCAGATCAGTTGGAAATATTTGACCAAGATGGAACG
AGAACGTCAAAAACGTGAATTGTCACTGAATGAGATGGTGACCAAGAAAC
AGATTAAGAAAGGTGAACTTGCCAAGTCCGTCTTGGAGAAAGTAGTTGAG
CATTGGGAAGTATCTTTAGTAGTCCATCCAGCCATTCAATTATTAATAAA
AAAGAAGTGGATGCTGATTGGTCGAAAGGCTTCAATTTTCAGTCTCGTTC
TCAACGTCATTTACGCACTTTTATGGTCGGCAGTTGGCGTCGCAACGCCG
GTAATGGGACCAACAATTTATCGGCCCTTTTCGCTGTGGTGGCATATTAC
AGTGCTTGAGGTGATCGGAGTTGGCTTGACCATCTATTTCATGGCTACTC
ACATTGTGGAGATCCAGATCGACAAGCGACGTGATAACGCTTATGGGAAA
TGGGTGATCGCACAAGCAGAACGCGACCTCAAATATTGTCATCCCAGGTG
GCCTGAAGAGAGACGTCACATTGATGACACCATTGAAGCTATtggaaatc
gaaagcgaaagcgaTATTTCTCCGATGGATGGAATTGTTTTGATTGGTTC
GTTTATTTGTTGGTATGGGTCGTTATGGCAACTCGTTTATTGAACCTCTT
ACTGGAGGACGATAAATTGAAATATTACCACATGCGCATCTTCTCTCTCA
CACTTATCTTCATTTGGCTTCGTCTATTACGCAGACTGAAACCTTTCCCT
TACTTCGGGCCTTTCATTATCATGCTGGGCTACGTCGTTATAGATACCAT
AAAATTTCTggtcttgtttttattgatttacaTTCCGTATTGTTGCGCTT
TTTGGATGATCTTCGGCGGACCACAATTACGTCATTCCAAATCATTTCTT
CACGAGATCAATGATATGGtgtatgatatttttcaaatgtcattAGTGGG
CGAGTTCAAATGGAAAGAATTTGTGGAGATTGATGAAACATTTGCACAGC
TTTTGACGGGTTCTTACATGGGTTTGACGTCAGTGGTTGCCATCAGTTTG
TACATAGCTTTGTTGGCGACCACCTTTTCTCGGAAGTATCCACAAAGTGT
AGCCATGGCGCTCATCATGCAAGCGGAAAGATGCGTACAGGTGGAACGAA
TGATCCCTAAGAAAACACACTTGAACATGAAAGCTTTCTTCCACGAAGAC
TGTGCACCTTTGGTTGAGGAAATGAAAGGTGAATCAATCTCTATAGCAAC
TAACAACGCGACGTTGAGCAAGTTGGATTTCAGTCGTTGGAGAGGTCGTC
ATGAAAACGAAATCGATGAAGTTCGTTACAGTATGAGAGAATTGAATAAA
AAGCAAGATCGTCTCGTTCATCAGTTCAGGTTTATTCTCGATAACCTtga
cgatgatgatgatatGGTCAGTGAAATATAGACTTTTTGGCTAAATCATC
TGAAATTTGGTTTTGATAGGCGAGGTGAATCATCGTCAGTAAAATGAGGC
AATGATTTTTCCTGAATCTTTTCATGAATATGGGACGGACGAAGCAATGG
AATCTTGAACTTTGTGATAAAGACAATATGGGAACTGGGGTTATCCACAG
ACTACAGTTTGTGATAAGAAATTCTTTTGACGTAGCAGTTATGGTGAAAC
TTTAAACATTTATATTTCAAGACACTATTTTTGGAACTGAGGAGAGCATT
CACAAAATAAGTGAAACCATTGAGCCCTTTTTAACGGTTAAAATAGTTTG
GTCTCTTTACTACAAATTACGTATTGTAGAAGCTATGAAATtcagtactc
tcgggtaccttatagccggggggggg
Run BLAST on NCBI

transcript from alignment at sc0000201:371100..381394+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014945 ID=TCONS_00014945|Name=TCONS_00014945|organism=Clytia hemisphaerica|type=transcript|length=10295bp|location=Sequence derived from alignment at sc0000201:371100..381394+ (Clytia hemisphaerica)
AAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATTTTTCGAGAATTT
TGATAACCTCTGCACATTGGAATATACCGCGTTCTGTATTTTGTCATGAA
GAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAATAAAGATCTA
CTGGTGACGGTAAGCAAAAGTAAACGCTTTTTGGTTTTATTCGACTTTTG
GTTTTATTTGAGACCTTTttatttatcttcttttttgCTGTTCTTGCTGG
TTCTTGTCGATTTCACAGACCTTACCTTAGAGAGacttaaattttgcaaa
aagtgACCATCAGAGAGGCGATATTCGAAAACTGTCTCACCTTTAAGAAA
TTTTCATAACTTTGATTCGATTTtaagagactttgaaaggtaaaAAAAGC
TCCTTCGTTATGGTCTGCACATACCAAAGTACCCAAATGTTCCTAAGTAA
CCTCCTGTCCTAATTTTGGTGACTGATGAATCCAGCACTGTCAATCAAAG
TAGCTCTCATGGGCGTAATCCACTATTTCtaacaaataagaaaatattat
atCCGTGAATCATTTTTAGGaacgtcaaatttaaaaaaaaacattaatca
GTTTGGAACATTTGTTAGATAGTAAGCACATGATTTTCCCTCTAATAGTC
ATCATATTTTTGTTCTGTCCCACTAGCTATGTTTTTGAAGTTGGAATCGG
CTCGAAAGAATGAAAAAGACGAAGAGAACATTCCCTTAACGAGTAACAGA
TCGACAATACACTCGGGGCGTGAACAATTTCCACCTCCAGCCGGGCGGAA
TTTATATACACCGCCTTTAATTGTCAAAACACCGGATGAAGACTATCGAA
AACAGTTCAACTCAACATCAGGTACGATTTATTGTCTAGTGCTAGGTTNA
TTCTACTTTGATATTGCCAGAATATATGTGCTCTTCTTTTTAAGAAACTT
AATTTTTCAATAGAACCTTaacttcattaaaatatttatcataACACTGT
ATGAATCGGCTATCGAAATTCTCTTCTTTCTCTTTACTATCTTTTTCAGC
GTGCGGTTTTCAAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATTT
CGAGAATTTTGATAACCTCTGCACATTGGAATATACCACGTTCTGTATTT
TGTCATGAAGAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAAT
AAAGATCTACTGGTGACGGTGAGGAAAAGCGTTTTGGTTTTATTCGAGAT
CTTAaacctttttatttattttcttttttgctgTTCTTGCTGGTTCTTGT
CGATTTCACAGACTTTACCTTAGAGAGACTTAATTTTGCGAAANTACGAT
TTATTGGCTAGTGCTAGGTCGCGGCAGCTACAAGGTTTTACTGTAGGATT
TCCATCAAGAGCAAACTGCATGTTTAGTACCTTTTCAAGTAGCAGCTTTT
CAAGTTCTGAGAGTCTGCAAAATATGAGCCAGAGTGAAGAATCTTGCTGA
CGTTATCTACATTTTCACATCGAAATTTTCCTTTAAGCTGACAACGTTTT
GTTAAGAACTCTAGATTAATTCATGCcttaataattttataaaaccGCTG
AATGATATTTCGCTAATTCTTTTACCTGTGACTTGTAGCAAAAGATGGTA
CTGATATAGGCTACCTGATGCGTTCTCCAAAACGACAAAATGGTGGACCG
TCCAATAGAAATCATCGAACCAGGGACCATGTTGATGCCGTCAACTTTCG
AAGACGAAACAAACAAAACCAAAGATCCGTTCAAAACAAACGATCCGTTA
TTGAAGAGCCTTTCAGACGCCATAATTACAAAAGCCCGGCGCCTCTCGAT
GAAGCACGCATTTCAGTCAAGCAGCGTACGCTTGAAGAACGCGGAGANAT
AATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTTCAGTCAAGCA
GCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGATCTTTTGACAG
GTAAGACTTTTCAATATGTACATTTTCAACAATAGGACGAGTATCGTCAA
ACATAGTAAGCGATCTATTGTTGTATTATGATCTTACTAAAACACTCACG
ACATAAACGACTTGAATAACTACAGTTGAAGTTGAATGAGTAAAATTATT
ATGAATTATAACGTGTTCTTTGATGATATCGAGCGTGCTTTATCACTTGT
NCATTTGTTAGATAGCAAGCACATGATTTTCCGTCTAATAGTGatcatat
ttttgttttatctcACTAGCTATGTTTTTGAAGTTGGAATCGGCTCGAAA
GAACGAAAGAGACGAAGAGAACATTCCCTTAACGAGCAACAGATCGACAA
TACACTCGGGGCGTGAACAATTCCCACCTCCAGCCGGGCGGAATTTATAT
ACACCGCCCTTAATTGTCAAAACACCGGATGAAGACTATCGAAAACAGTT
CAACTCAACATCAGGTACGATTTATTGGCTAGTGCTAGGTCGCGGCAGCT
ACAAGGTTTTACTGTAGGATTTCCATCAAGAGCAAACTGCATGTTTAGTA
CCTTTTCAAGTAGCAGCTTTTCAAGTTCTGAGAGTCTGCAAAATATGAGC
CAGAGTGAAGAATCTTGCTAATGTTATCTACATTTTCACattcaaatttt
cctctaaGCTGACAACGTTTTGTTAAGAACTCTAGATTTATTCTCCCTTA
TTCCCTCGTGCCTCAATAATTTTGTAACCGCTGAATGATATTTCGCTAAT
TCTTTTACCTGTGACTTGTAGCAAAAGACGGTACTGATATAGGCTATCTG
ATGCGTTCTCCAAAACGACAAAATGGTGGACCGTCCAATAGAAATCATCG
AACCAGGGACCATGTTGATGCCGTCAACTTTCGAAGACGAAACAAACAAA
ACCAAAGATCCGTTCAAAACAAACGATCCGTTATTGAAGAGCCTTTCAGA
CGCCATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTTCAGT
CAAGCAGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGATCTTT
TGACAGGTAAGACTTTTCAATATGTACATTTTCAACAATAGGACGAGTAT
CGTCAAACATAGTAAGCGATCCATTGTATAGATTATGATCTTACTAAAAC
ACTCACGACATAAACGACTTGAATAACTACAGTTGAAGTTGAATGAGTAA
GATTATTATGGATAATAACGTGTTCTTTGATGATATCGAGCGTGCTTTAT
CACTTACTTCTTACCAACAGGCAATCGTGGAGCATCGATGGGGATGTTGG
ATAGCGATGGGAACAGTAGCGACAATGGCGAAACTACATTACGAAAAAAG
AAGAATACATATATCAAGAGCAAAGAACTCATCACTTATTTTGCACAACT
CGCTCGAAGTAAGAACCCTACCGATGCAATAGATCTCAAGATGGTGGACC
GTCTCATTCGCAATGGTGCCAACCTCAACGTTACCGATAAATACGGTCAA
ACGGTCATGCATGAAGTGGCAAAGAACTGGCACACTGACGTCGCAAAATA
TCTCATCAAGCGGGGCGCTATTTACGACGCCAAAGACCGTTATGGGCGGA
CACCCCTTCATCTTGCATCGGCTGTGGGACATGTAGAAATGATTGATTTT
TTAGTGGGTCAAGATCACGGTaagttttatcatttttttttttttttcga
taaaaATCTTTATGACGGTTTTAAGTCCCTTACTGAAATGTATAAGGGAA
TTTCGCTCAGACTTTAATGCGTTCTAATATATGTTATCCGATATTACAAA
TCATTTTTGTAGAATTCGACTTTCTTTCCCTTACAGTTTTGCCTGTAGTC
TATGGCCATAAAGATTTCAAGGGCCTGATTTGCTTAtcccctttaaaaaa
attctctaaataATACTATTTTTGAAGCTGACTATTCTTGTCTCGGTTTA
CTAAGGAATGATCCCTTACTTAATATCCTATTACGCCATTGCGAGGAAAG
GTCGACCAAAATCGTTGTATACCTTATTGATCGGGCGGTTTGTGGTGCTA
TCAATGGTGCACGGGTCGCGGCTTCACTAGATCCCTACTGTTTCACAATT
AAAAGAGGACGTATCGCACTCATTCCACTAAATGACTGTANGATCCCTAC
TGTTTCACAATTAAAAGAGGACGTATCGCACTCATTCCACTAAATGACTG
TAAAAGGCTTTGATTCGTAAACTTGAACATTTTCAGAGAAACTAAAAGAC
GTGACGAAGGACGAGCGTCAGACAGCGCTTCATTACGCAGCAAAGAACAA
CTCAGTAGGAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCGTCGATGAACG
ATCGAGACTATCGATTACGTACTGCTCTCCATCTCGCTGCTGAAAACGGT
AATATGCTTTTTTTAGTAATAATTCTTACTTAAGAGTGATATTTGCTTGA
CTTCATTTCATATAAAACTATTACAATGTCAAAAAACAAACACTTTTTAC
CAGTGTTTTTGTCCGGTTGACACTTTTTCAAGAACGAAATTCAATTTAAC
CTTTACATGTCCCCtgtttttcaaatgaaaatggaGAACTAGGGGTTTTG
GAAGGCTAAAAAGAAATCGATTGAACGGAGGAGTTAAAAAATTAGCTTTG
TTTTGGAAATGCCCCCCCACAGACTTGTAAGACAAAATTATTCTGTACTC
AAATATTTCCTTGAGATTACTGCTGCTTCTCGATTTTCAGGACGTATTGA
AGCTGCGCGATATTTATTGAGCAAGAACGCTCCATGTGCAGTGTACGATG
ATCAAGGTGTTTCATGTCTCTCCATCATGGTTCAGAAGATGCCTGGTGTA
GCCTTCCTGGCCTTGCAACAATTCTACGCTGAAGATCCTGCCAATAGAAA
ACTATATTGCTATTTGAATTACTTGGAGAAGAAGTTGTTAGCAGATGAGG
AGTTGCAGATCAGTTGGAAATATTTGACCAAGATGGAACGAGAACGTCAA
AAACGTGAATTGTCACTGAATGAGATGGTGACCAAGAAACAGATTAAGAA
AGGTGAACTTGCCAAGTCCGTCTTGGAGGTGAGCACTCTTCTGTTAGAAT
ATCTACCTCGAAACTCTTCTCTTGGACATCTGAATCTTCTTGGCTAAATT
ccttttttttggacctacctccgggtaccccggtggaggttctataaatt
aacccatgtccgttcgtccgtccgtctgtccgttcgttcgtccgtccgtc
cgtccgtctgttaccagcttttctcaggattggctcattagttttttctg
attttttgcgcaatgatgcaaaatggcaatgcccagaacgtgacggagtc
tgatttttgagaaaaaaattatttgggcaaatatgggccaaaaactacct
aaaaatagggttttttggacttggaaattccctttaaccaaataagaaaa
tatagcttttctcaatgttgactcgttatttttttctggttttttacaca
atgatgcaaaatggcaatgcctaaaatgtgtcggagtctgattttcgaaa
caaaatatatttggtcaaatttgggccaaaaactgcctaaaaatagggtt
ttttggactttgtgcaaaatcctgtcattacttttttctgattttttgta
caaagatggagggcaagattctctaaagaatggctgaagtggtttttctc
ggaaaattcttattcgccttaaaagacggattttcgtatttNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNaaccaaataagaaaatatagcttttctcaatgttgactcata
atttttttctgattttttgcacaatgatgcaaaatggcaatgcctaaaat
gtgtcggggccgattttcgaaacaaaatatatttggtcaaatttgggcca
aaaacagcttaaaaggttttttgggcctgaatggtttaagtgattttcgt
atttggggaaattcctttttaccattttacattattcaaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttccattctg
aatttttgtataattattgtcacttttttcttattttcatctgatgttaa
tcattaggtaggtccattcagcatgttgcttgttttttcttgaattcCTC
TAAATCTAATTTTCCCCTATTTTAAACCAAATATCTGGCTCCTTGAGGTG
TGTTTCATGGCTGATTTCCTTGAAGGCTCAAGAGGGATTGATTCAGCTGT
AAATATGTTTGGGCACTCAGAAGTTAGACAACAACCTCGTTACGATATAG
TCTCAGTCAACATCGGAAGGATGAGAATACGCTGAGGAAACGAGGTTTAG
TAGATGTGTGTTCGGGAAAATGTCACTCTCTACCATTTATGTACTATATT
GAACGCATCCTCTCAGGTAGGGGNTGTTCGGGAAAATGTCACTCTCTACC
ATTTATGTACTATATTAAACGCATCCTCTCAGGTAGGGAATACGATTCAC
TCTCCCCTTCAAAAGATAATAACgagtttttttctttcgttCATGTTCAG
AAAGTAGTTGAGCATTGGGAAGTATCTTTAGTAGTCCATCCAGCCATTCA
ATTATTAATAAAAAAGAAGTGGATGCTGATTGGTCGAAAGGCTTCAATTT
TCAGTCTCGTTCTCAACGTCATTTACGCACTTTTATGGTCGGCAGTTGGC
GTCGCAACGCCGGTAATGGGACCAACAATTTATCGGCCCTTTTCGCTGTG
GTGGCATATTACAGTGCTTGAGGTGATCGGAGTTGGCTTGACCATCTATT
TCATGGCTACTGTGAGTATATACTCTTTTAAGTTTGTCATTGAGCTCGTA
cagaaagaaatctttttacaGTATCAcagtttttccgaaaatttcataat
ttctgCTACTTTTGTTTTCCGATATTCACGAGACATGAATTTACTGATGT
TGTCTTATGGTGtaaactaattaaatattcTATACGATTTTTCTCTCTCG
ATCCTTTACAGCACATTGTGGAGATCCAGATCGACAAGCGACGTGATAAC
GCTTATGGGAAATGGGTGATCGCACAAGCAGAACGCGACCTCAAATATTG
TCATCCCAGGTGGCCTGAAGAGAGACGTCACATTGATGACACCATTGAAG
CTATtggaaatcgaaagcgaaagcgaTATTTCTCCGATGGATGGAATTGT
TTTGATTGGTTCGTTTATTTGTTGGTATGGGTCGTTATGGCAACTCGTTT
ATTGAACCTCTTACTGGAGGACGATAAATTGAAATATTACCACATGCGCA
TCTTCTCTCTCACACTTATCTTCATTTGGCTTCGTCTATTACGCAGACTG
AAACCTTTCCCTTACTTCGGGCCTTTCATTATCATGCTGGGCTACGTCGT
TATAGATACCATAAAATTTCTggtcttgtttttattgatttacaTTCCGT
ATTGTTGCGCTTTTTGGATGATCTTCGGCGGACCACAATTACGTCATTCC
AAATCATTTCTTCACGAGATCAATGATATGGtgtatgatatttttcaaat
gtcattAGTGGGCGAGTTCAAATGGAAAGAATTTGTGGAGATTGATGAAA
CATTTGCACAGGTATGCTGATAAAGTACTTTTTTACTACATATTTTAGGA
ACCAGTTCTGTTGTGATTACCGAAGCTTTCGATAGAAATAAATAATTACA
AGCCGTTTCTTGGAGTGAAATAAACTTGTCAGTCTTAccgatttttaaaa
taaatgaaatcaaCGAACAACATTTTATTTCAATCCTCTCTTAGACTTTT
CACTGTCTTCTGTTTCAGCTTTTGACGGGTTCTTACATGGGTTTGACGTC
AGTGGTTGCCATCAGTTTGTACATAGCTTTGTTGGCGACCACCTTTTCTC
GGAAGTATCCACAAAGTGTAGCCATGGCGCTCATCATGCAAGCGGAAAGA
TGCGTACAGGTGGAACGAATGATCCCTAAGAAAACACACTTGAACATGAA
AGCTTTCTTCCACGAAGACTGTGCACCTTTGGTAAGAATATCTTAGAGGA
AAAGAATTATGACGgcaatttaatttggcagttgaaagatattttttact
AGAAATCATTGTTGAATAAGAATTAAACTTGTTTTGACACCTGAAATAGC
ACGAGTATGGGAAAcggttgaaaaaaatctaatttggtGGACATTTAATT
AAAGGATGGTAAAAATAGGGCATTTTGAAGGGAACTTAATTTGGGGGATA
TTTTATCCAATATACGGGCTTGTCTCTTTTTCTATCTGCGATCccacaac
aaaaaaatttagtcACAAAATTTAAACAGATAGCCCCGCTGCCAATGCTT
AGTTCGGATGTGATCAAGATTTGCTATGTTTCGCTAGATTTATATTATTT
CTTAACGATTCTTGTCCAGGTTGAGGAAATGAAAGGTNTGTTTCGCTaga
tttatattattttttaacgATTCTTGTCCAGGTTGAGGAAATGAAAGGTG
AATCAATCTCTATAGCAACTAACAACGCGACGTTGAGCAAGTTGGATTTC
AGTCGTTGGAGAGGTCGTCATGAAAACGAAATCGATGAAGTTCGTTACAG
TATGAGAGAATTGAATAAAAAGCAAGATCGTCTCGTTCATCAGTTCAGGT
TTATTCTCGATAACCTtgacgatgatgatgatatGGTCAGTGAAATATAG
ACTTTTTGGCTAAATCATCTGAAATTTGGTTTTGATAGGCGAGGTGAATC
ATCGTCAGTAAAATGAGGCAATGATTTTTCCTGAATCTTTTCATGAATAT
GGGACGGACGAAGCAATGGAATCTTGAACTTTGTGATAAAGACAATATGG
GAACTGGGGTTATCCACAGACTACAGTTTGTGATAAGAAATTCTTTTGAC
GTAGCAGTTATGGTGAAACTTTAAACATTTATATTTCAAGACACTATTTT
TGGAACTGAGGAGAGCATTCACAAAATAAGTGAAACCATTGAGCCCTTTT
TAACGGTTAAAATAGTTTGGTCTCTTTACTACAAATTACGTATTGTAGAA
GCTATGAAATtcagtactctcgggtaccttatagccggggggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008357XLOC_008357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014945-exon-sc0000201-1491911889:371100..371258TCONS_00014945-exon-sc0000201-1491911889:371100..371258Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:371100..371258TCONS_00014945-exon-sc0000201-1510915933:371100..371258Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:371100..371258TCONS_00014945-exon-sc0000201-1575043694:371100..371258Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:371776..371970TCONS_00014945-exon-sc0000201-1491911889:371776..371970Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:371776..371970TCONS_00014945-exon-sc0000201-1510915933:371776..371970Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:371776..371970TCONS_00014945-exon-sc0000201-1575043694:371776..371970Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:373871..374155TCONS_00014945-exon-sc0000201-1491911889:373871..374155Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:373871..374155TCONS_00014945-exon-sc0000201-1510915933:373871..374155Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:373871..374155TCONS_00014945-exon-sc0000201-1575043694:373871..374155Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:374370..374768TCONS_00014945-exon-sc0000201-1491911889:374370..374768Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:374370..374768TCONS_00014945-exon-sc0000201-1510915933:374370..374768Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:374370..374768TCONS_00014945-exon-sc0000201-1575043694:374370..374768Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:375336..375497TCONS_00014945-exon-sc0000201-1491911889:375336..375497Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:375336..375497TCONS_00014945-exon-sc0000201-1510915933:375336..375497Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:375336..375497TCONS_00014945-exon-sc0000201-1575043694:375336..375497Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:375840..376177TCONS_00014945-exon-sc0000201-1491911889:375840..376177Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:375840..376177TCONS_00014945-exon-sc0000201-1510915933:375840..376177Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:375840..376177TCONS_00014945-exon-sc0000201-1575043694:375840..376177Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:378850..379110TCONS_00014945-exon-sc0000201-1491911889:378850..379110Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:378850..379110TCONS_00014945-exon-sc0000201-1510915933:378850..379110Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:378850..379110TCONS_00014945-exon-sc0000201-1575043694:378850..379110Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:379311..379910TCONS_00014945-exon-sc0000201-1491911889:379311..379910Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:379311..379910TCONS_00014945-exon-sc0000201-1510915933:379311..379910Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:379311..379910TCONS_00014945-exon-sc0000201-1575043694:379311..379910Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:380118..380330TCONS_00014945-exon-sc0000201-1491911889:380118..380330Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:380118..380330TCONS_00014945-exon-sc0000201-1510915933:380118..380330Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:380118..380330TCONS_00014945-exon-sc0000201-1575043694:380118..380330Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1491911889:380781..381394TCONS_00014945-exon-sc0000201-1491911889:380781..381394Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1510915933:380781..381394TCONS_00014945-exon-sc0000201-1510915933:380781..381394Clytia hemisphaericaexon
TCONS_00014945-exon-sc0000201-1575043694:380781..381394TCONS_00014945-exon-sc0000201-1575043694:380781..381394Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:371100..381394 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.00414293	0	0	0	0	0	0.247815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6.73278e-08	0	0	0	0
Blast
[Close]
BLAST of TCONS_00014945 vs. Swiss-Prot (Human)
Match: ANK2 (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4)

HSP 1 Score: 92.8189 bits (229), Expect = 9.560e-19
Identity = 65/215 (30.23%), Postives = 109/215 (50.70%), Query Frame = 3 
Query:  804 LKMVDRLIRNGANLNVTDKYGQTVMHEVAKNWHTDVAKYLIKRGAIYDAKDRYGRTPLHLASAVGHVEMIDFLVGQDHEKLKDVTKDERQTALHYAAKNNSVGALKVLLKLGASMNDRDYRLRTALHLAAENGRIEAARYLLSKNAPCAVYDDQGVSCLSIMV----QKMPGVAFLALQQFYAEDPANRKLYCYLNYLEKKLLADEELQISWKYL 1436
            L +V  L++NGA+ +VT+  G+T +H  A+    +V + L++ GA+ DA+ R  +TPLH+AS +G  E++  L+   H    D       T LH +A+   V    VLL+ GA+ +    +  T LH+AA+ G ++ A+ LL + A        G++ L +      QK   VA L L++  +     +  Y  L+   KK     ++QI+   L
Sbjct:  444 LNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLL--QHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQK---VALLLLEKGASPHATAKNGYTPLHIAAKK----NQMQIASTLL 649
The following BLAST results are available for this feature:
BLAST of TCONS_00014945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANK29.560e-1930.23Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4[more]
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