TCONS_00014948 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014948
Unique NameTCONS_00014948
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3145

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014948 ID=TCONS_00014948|Name=TCONS_00014948|organism=Clytia hemisphaerica|type=transcript|length=3145bp
TTCTGTATTTTGTCATGAAGAAACTAGTGTGATACTTCTACTTGAAACCT
GACGGCAAATAAAGATCTACTGGTGACGCTATGTTTTTGAAGTTGGAATC
GGCTCGAAAGAACGAAAGAGACGAAGAGAACATTCCCTTAACGAGCAACA
GATCGACAATACACTCGGGGCGTGAACAATTCCCACCTCCAGCCGGGCGG
AATTTATATACACCGCCCTTAATTGTCAAAACACCGGATGAAGACTATCG
AAAACAGTTCAACTCAACATCAGCAAAAGACGGTACTGATATAGGCTATC
TGATGCGTTCTCCAAAACGACAAAATGGTGGACCGTCCAATAGAAATCAT
CGAACCAGGGACCATGTTGATGCCGTCAACTTTCGAAGACGAAACAAACA
AAACCAAAGATCCGTTCAAAACAAACGATCCGTTATTGAAGAGCCTTTCA
GACGCCATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTTCA
GTCAAGCAGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGATCT
TTTGACAGGCAATCGTGGAGCATCGATGGGGATGTTGGATAGCGATGGGA
ACAGTAGCGACAATGGCGAAACTACATTACGAAAAAAGAAGAATACATAT
ATCAAGAGCAAAGAACTCATCACTTATTTTGCACAACTCGCTCGAAGTAA
GAACCCTACCGATGCAATAGATCTCAAGATGGTGGACCGTCTCATTCGCA
ATGGTGCCAACCTCAACGTTACCGATAAATACGGTCAAACGGTCATGCAT
GAAGTGGCAAAGAACTGGCACACTGACGTCGCAAAATATCTCATCAAGCG
GGGCGCTATTTACGACGCCAAAGACCGTTATGGGCGGACACCCCTTCATC
TTGCATCGGCTGTGGGACATGTAGAAATGATTGATTTTTTAGTGGGTCAA
GATCACGAGAAACTAAAAGACGTGACGAAGGACGAGCGTCAGACAGCGCT
TCATTACGCAGCAAAGAACAACTCAGTAGGAGCGTTGAAAGTCCTTTTGA
AGCTGGGTGCGTCGATGAACGATCGAGACTATCGATTACGTACTGCTCTC
CATCTCGCTGCTGAAAACGGACGTATTGAAGCTGCGCGATATTTATTGAG
CAAGAACGCTCCATGTGCAGTGTACGATGATCAAGGTGTTTCATGTCTCT
CCATCATGGTTCAGAAGATGCCTGGTGTAGCCTTCCTGGCCTTGCAACAA
TTCTACGCTGAAGATCCTGCCAATAGAAAACTATATTGCTATTTGAATTA
CTTGGAGAAGAAGTTGTTAGCAGATGAGGAGTTGCAGATCAGTTGGAAAT
ATTTGACCAAGATGGAACGAGAACGTCAAAAACGTGAATTGTCACTGAAT
GAGATGGTGACCAAGAAACAGATTAAGAAAGGTGAACTTGCCAAGTCCGT
CTTGGAGAAAGTAGTTGAGCATTGGGAAGTATCTTTAGTAGTCCATCCAG
CCATTCAATTATTAATAAAAAAGAAGTGGATGCTGATTGGTCGAAAGGCT
TCAATTTTCAGTCTCGTTCTCAACGTCATTTACGCACTTTTATGGTCGGC
AGTTGGCGTCGCAACGCCGGTAATGGGACCAACAATTTATCGGCCCTTTT
CGCTGTGGTGGCATATTACAGTGCTTGAGGTGATCGGAGTTGGCTTGACC
ATCTATTTCATGGCTACTCACATTGTGGAGATCCAGATCGACAAGCGACG
TGATAACGCTTATGGGAAATGGGTGATCGCACAAGCAGAACGCGACCTCA
AATATTGTCATCCCAGGTGGCCTGAAGAGAGACGTCACATTGATGACACC
ATTGAAGCTATtggaaatcgaaagcgaaagcgaTATTTCTCCGATGGATG
GAATTGTTTTGATTGGTTCGTTTATTTGTTGGTATGGGTCGTTATGGCAA
CTCGTTTATTGAACCTCTTACTGGAGGACGATAAATTGAAATATTACCAC
ATGCGCATCTTCTCTCTCACACTTATCTTCATTTGGCTTCGTCTATTACG
CAGACTGAAACCTTTCCCTTACTTCGGGCCTTTCATTATCATGCTGGGCT
ACGTCGTTATAGATACCATAAAATTTCTggtcttgtttttattgatttac
aTTCCGTATTGTTGCGCTTTTTGGATGATCTTCGGCGGACCACAATTACG
TCATTCCAAATCATTTCTTCACGAGATCAATGATATGGtgtatgatattt
ttcaaatgtcattAGTGGGCGAGTTCAAATGGAAAGAATTTGTGGAGATT
GATGAAACATTTGCACAGCTTTTGACGGGTTCTTACATGGGTTTGACGTC
AGTGGTTGCCATCAGTTTGTACATAGCTTTGTTGGCGACCACCTTTTCTC
GGAAGTATCCACAAAGTGTAGCCATGGCGCTCATCATGCAAGCGGAAAGA
TGCGTACAGGTGGAACGAATGATCCCTAAGAAAACACACTTGAACATGAA
AGCTTTCTTCCACGAAGACTGTGCACCTTTGGTTGAGGAAATGAAAGGTG
AATCAATCTCTATAGCAACTAACAACGCGACGTTGAGCAAGTTGGATTTC
AGTCGTTGGAGAGGTCGTCATGAAAACGAAATCGATGAAGTTCGTTACAG
TATGAGAGAATTGAATAAAAAGCAAGATCGTCTCGTTCATCAGTTCAGGT
TTATTCTCGATAACCTtgacgatgatgatgatatGGTCAGTGAAATATAG
ACTTTTTGGCTAAATCATCTGAAATTTGGTTTTGATAGGCGAGGTGAATC
ATCGTCAGTAAAATGAGGCAATGATTTTTCCTGAATCTTTTCATGAATAT
GGGACGGACGAAGCAATGGAATCTTGAACTTTGTGATAAAGACAATATGG
GAACTGGGGTTATCCACAGACTACAGTTTGTGATAAGAAATTCTTTTGAC
GTAGCAGTTATGGTGAAACTTTAAACATTTATATTTCAAGACACTATTTT
TGGAACTGAGGAGAGCATTCACAAAATAAGTGAAACCATTGAGCCCTTTT
TAACGGTTAAAATAGTTTGGTCTCTTTACTACAAATTACGTATTGTAGAA
GCTATGAAATtcagtactctcgggtaccttatagccggggggggg
Run BLAST on NCBI

transcript from alignment at sc0000201:372240..381394+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014948 ID=TCONS_00014948|Name=TCONS_00014948|organism=Clytia hemisphaerica|type=transcript|length=9155bp|location=Sequence derived from alignment at sc0000201:372240..381394+ (Clytia hemisphaerica)
TTCTGTATTTTGTCATGAAGAAACTAGTGTGATACTTCTACTTGAAACCT
GACGGCAAATAAAGATCTACTGGTGACGGTGAGGAAAAGCGTTTTGGTTT
TATTCGAGATCTTAaacctttttatttattttcttttttgctgTTCTTGC
TGGTTCTTGTCGATTTCACAGACTTTACCTTAGAGAGACTTAATTTTGCG
AAANTACGATTTATTGGCTAGTGCTAGGTCGCGGCAGCTACAAGGTTTTA
CTGTAGGATTTCCATCAAGAGCAAACTGCATGTTTAGTACCTTTTCAAGT
AGCAGCTTTTCAAGTTCTGAGAGTCTGCAAAATATGAGCCAGAGTGAAGA
ATCTTGCTGACGTTATCTACATTTTCACATCGAAATTTTCCTTTAAGCTG
ACAACGTTTTGTTAAGAACTCTAGATTAATTCATGCcttaataattttat
aaaaccGCTGAATGATATTTCGCTAATTCTTTTACCTGTGACTTGTAGCA
AAAGATGGTACTGATATAGGCTACCTGATGCGTTCTCCAAAACGACAAAA
TGGTGGACCGTCCAATAGAAATCATCGAACCAGGGACCATGTTGATGCCG
TCAACTTTCGAAGACGAAACAAACAAAACCAAAGATCCGTTCAAAACAAA
CGATCCGTTATTGAAGAGCCTTTCAGACGCCATAATTACAAAAGCCCGGC
GCCTCTCGATGAAGCACGCATTTCAGTCAAGCAGCGTACGCTTGAAGAAC
GCGGAGANATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTT
CAGTCAAGCAGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGAT
CTTTTGACAGGTAAGACTTTTCAATATGTACATTTTCAACAATAGGACGA
GTATCGTCAAACATAGTAAGCGATCTATTGTTGTATTATGATCTTACTAA
AACACTCACGACATAAACGACTTGAATAACTACAGTTGAAGTTGAATGAG
TAAAATTATTATGAATTATAACGTGTTCTTTGATGATATCGAGCGTGCTT
TATCACTTGTNCATTTGTTAGATAGCAAGCACATGATTTTCCGTCTAATA
GTGatcatatttttgttttatctcACTAGCTATGTTTTTGAAGTTGGAAT
CGGCTCGAAAGAACGAAAGAGACGAAGAGAACATTCCCTTAACGAGCAAC
AGATCGACAATACACTCGGGGCGTGAACAATTCCCACCTCCAGCCGGGCG
GAATTTATATACACCGCCCTTAATTGTCAAAACACCGGATGAAGACTATC
GAAAACAGTTCAACTCAACATCAGGTACGATTTATTGGCTAGTGCTAGGT
CGCGGCAGCTACAAGGTTTTACTGTAGGATTTCCATCAAGAGCAAACTGC
ATGTTTAGTACCTTTTCAAGTAGCAGCTTTTCAAGTTCTGAGAGTCTGCA
AAATATGAGCCAGAGTGAAGAATCTTGCTAATGTTATCTACATTTTCACa
ttcaaattttcctctaaGCTGACAACGTTTTGTTAAGAACTCTAGATTTA
TTCTCCCTTATTCCCTCGTGCCTCAATAATTTTGTAACCGCTGAATGATA
TTTCGCTAATTCTTTTACCTGTGACTTGTAGCAAAAGACGGTACTGATAT
AGGCTATCTGATGCGTTCTCCAAAACGACAAAATGGTGGACCGTCCAATA
GAAATCATCGAACCAGGGACCATGTTGATGCCGTCAACTTTCGAAGACGA
AACAAACAAAACCAAAGATCCGTTCAAAACAAACGATCCGTTATTGAAGA
GCCTTTCAGACGCCATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCAC
GCATTTCAGTCAAGCAGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGG
CATGATCTTTTGACAGGTAAGACTTTTCAATATGTACATTTTCAACAATA
GGACGAGTATCGTCAAACATAGTAAGCGATCCATTGTATAGATTATGATC
TTACTAAAACACTCACGACATAAACGACTTGAATAACTACAGTTGAAGTT
GAATGAGTAAGATTATTATGGATAATAACGTGTTCTTTGATGATATCGAG
CGTGCTTTATCACTTACTTCTTACCAACAGGCAATCGTGGAGCATCGATG
GGGATGTTGGATAGCGATGGGAACAGTAGCGACAATGGCGAAACTACATT
ACGAAAAAAGAAGAATACATATATCAAGAGCAAAGAACTCATCACTTATT
TTGCACAACTCGCTCGAAGTAAGAACCCTACCGATGCAATAGATCTCAAG
ATGGTGGACCGTCTCATTCGCAATGGTGCCAACCTCAACGTTACCGATAA
ATACGGTCAAACGGTCATGCATGAAGTGGCAAAGAACTGGCACACTGACG
TCGCAAAATATCTCATCAAGCGGGGCGCTATTTACGACGCCAAAGACCGT
TATGGGCGGACACCCCTTCATCTTGCATCGGCTGTGGGACATGTAGAAAT
GATTGATTTTTTAGTGGGTCAAGATCACGGTaagttttatcatttttttt
tttttttcgataaaaATCTTTATGACGGTTTTAAGTCCCTTACTGAAATG
TATAAGGGAATTTCGCTCAGACTTTAATGCGTTCTAATATATGTTATCCG
ATATTACAAATCATTTTTGTAGAATTCGACTTTCTTTCCCTTACAGTTTT
GCCTGTAGTCTATGGCCATAAAGATTTCAAGGGCCTGATTTGCTTAtccc
ctttaaaaaaattctctaaataATACTATTTTTGAAGCTGACTATTCTTG
TCTCGGTTTACTAAGGAATGATCCCTTACTTAATATCCTATTACGCCATT
GCGAGGAAAGGTCGACCAAAATCGTTGTATACCTTATTGATCGGGCGGTT
TGTGGTGCTATCAATGGTGCACGGGTCGCGGCTTCACTAGATCCCTACTG
TTTCACAATTAAAAGAGGACGTATCGCACTCATTCCACTAAATGACTGTA
NGATCCCTACTGTTTCACAATTAAAAGAGGACGTATCGCACTCATTCCAC
TAAATGACTGTAAAAGGCTTTGATTCGTAAACTTGAACATTTTCAGAGAA
ACTAAAAGACGTGACGAAGGACGAGCGTCAGACAGCGCTTCATTACGCAG
CAAAGAACAACTCAGTAGGAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCG
TCGATGAACGATCGAGACTATCGATTACGTACTGCTCTCCATCTCGCTGC
TGAAAACGGTAATATGCTTTTTTTAGTAATAATTCTTACTTAAGAGTGAT
ATTTGCTTGACTTCATTTCATATAAAACTATTACAATGTCAAAAAACAAA
CACTTTTTACCAGTGTTTTTGTCCGGTTGACACTTTTTCAAGAACGAAAT
TCAATTTAACCTTTACATGTCCCCtgtttttcaaatgaaaatggaGAACT
AGGGGTTTTGGAAGGCTAAAAAGAAATCGATTGAACGGAGGAGTTAAAAA
ATTAGCTTTGTTTTGGAAATGCCCCCCCACAGACTTGTAAGACAAAATTA
TTCTGTACTCAAATATTTCCTTGAGATTACTGCTGCTTCTCGATTTTCAG
GACGTATTGAAGCTGCGCGATATTTATTGAGCAAGAACGCTCCATGTGCA
GTGTACGATGATCAAGGTGTTTCATGTCTCTCCATCATGGTTCAGAAGAT
GCCTGGTGTAGCCTTCCTGGCCTTGCAACAATTCTACGCTGAAGATCCTG
CCAATAGAAAACTATATTGCTATTTGAATTACTTGGAGAAGAAGTTGTTA
GCAGATGAGGAGTTGCAGATCAGTTGGAAATATTTGACCAAGATGGAACG
AGAACGTCAAAAACGTGAATTGTCACTGAATGAGATGGTGACCAAGAAAC
AGATTAAGAAAGGTGAACTTGCCAAGTCCGTCTTGGAGGTGAGCACTCTT
CTGTTAGAATATCTACCTCGAAACTCTTCTCTTGGACATCTGAATCTTCT
TGGCTAAATTccttttttttggacctacctccgggtaccccggtggaggt
tctataaattaacccatgtccgttcgtccgtccgtctgtccgttcgttcg
tccgtccgtccgtccgtctgttaccagcttttctcaggattggctcatta
gttttttctgattttttgcgcaatgatgcaaaatggcaatgcccagaacg
tgacggagtctgatttttgagaaaaaaattatttgggcaaatatgggcca
aaaactacctaaaaatagggttttttggacttggaaattccctttaacca
aataagaaaatatagcttttctcaatgttgactcgttatttttttctggt
tttttacacaatgatgcaaaatggcaatgcctaaaatgtgtcggagtctg
attttcgaaacaaaatatatttggtcaaatttgggccaaaaactgcctaa
aaatagggttttttggactttgtgcaaaatcctgtcattacttttttctg
attttttgtacaaagatggagggcaagattctctaaagaatggctgaagt
ggtttttctcggaaaattcttattcgccttaaaagacggattttcgtatt
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNaaccaaataagaaaatatagcttttctcaatg
ttgactcataatttttttctgattttttgcacaatgatgcaaaatggcaa
tgcctaaaatgtgtcggggccgattttcgaaacaaaatatatttggtcaa
atttgggccaaaaacagcttaaaaggttttttgggcctgaatggtttaag
tgattttcgtatttggggaaattcctttttaccattttacattattcaaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ttccattctgaatttttgtataattattgtcacttttttcttattttcat
ctgatgttaatcattaggtaggtccattcagcatgttgcttgttttttct
tgaattcCTCTAAATCTAATTTTCCCCTATTTTAAACCAAATATCTGGCT
CCTTGAGGTGTGTTTCATGGCTGATTTCCTTGAAGGCTCAAGAGGGATTG
ATTCAGCTGTAAATATGTTTGGGCACTCAGAAGTTAGACAACAACCTCGT
TACGATATAGTCTCAGTCAACATCGGAAGGATGAGAATACGCTGAGGAAA
CGAGGTTTAGTAGATGTGTGTTCGGGAAAATGTCACTCTCTACCATTTAT
GTACTATATTGAACGCATCCTCTCAGGTAGGGGNTGTTCGGGAAAATGTC
ACTCTCTACCATTTATGTACTATATTAAACGCATCCTCTCAGGTAGGGAA
TACGATTCACTCTCCCCTTCAAAAGATAATAACgagtttttttctttcgt
tCATGTTCAGAAAGTAGTTGAGCATTGGGAAGTATCTTTAGTAGTCCATC
CAGCCATTCAATTATTAATAAAAAAGAAGTGGATGCTGATTGGTCGAAAG
GCTTCAATTTTCAGTCTCGTTCTCAACGTCATTTACGCACTTTTATGGTC
GGCAGTTGGCGTCGCAACGCCGGTAATGGGACCAACAATTTATCGGCCCT
TTTCGCTGTGGTGGCATATTACAGTGCTTGAGGTGATCGGAGTTGGCTTG
ACCATCTATTTCATGGCTACTGTGAGTATATACTCTTTTAAGTTTGTCAT
TGAGCTCGTAcagaaagaaatctttttacaGTATCAcagtttttccgaaa
atttcataatttctgCTACTTTTGTTTTCCGATATTCACGAGACATGAAT
TTACTGATGTTGTCTTATGGTGtaaactaattaaatattcTATACGATTT
TTCTCTCTCGATCCTTTACAGCACATTGTGGAGATCCAGATCGACAAGCG
ACGTGATAACGCTTATGGGAAATGGGTGATCGCACAAGCAGAACGCGACC
TCAAATATTGTCATCCCAGGTGGCCTGAAGAGAGACGTCACATTGATGAC
ACCATTGAAGCTATtggaaatcgaaagcgaaagcgaTATTTCTCCGATGG
ATGGAATTGTTTTGATTGGTTCGTTTATTTGTTGGTATGGGTCGTTATGG
CAACTCGTTTATTGAACCTCTTACTGGAGGACGATAAATTGAAATATTAC
CACATGCGCATCTTCTCTCTCACACTTATCTTCATTTGGCTTCGTCTATT
ACGCAGACTGAAACCTTTCCCTTACTTCGGGCCTTTCATTATCATGCTGG
GCTACGTCGTTATAGATACCATAAAATTTCTggtcttgtttttattgatt
tacaTTCCGTATTGTTGCGCTTTTTGGATGATCTTCGGCGGACCACAATT
ACGTCATTCCAAATCATTTCTTCACGAGATCAATGATATGGtgtatgata
tttttcaaatgtcattAGTGGGCGAGTTCAAATGGAAAGAATTTGTGGAG
ATTGATGAAACATTTGCACAGGTATGCTGATAAAGTACTTTTTTACTACA
TATTTTAGGAACCAGTTCTGTTGTGATTACCGAAGCTTTCGATAGAAATA
AATAATTACAAGCCGTTTCTTGGAGTGAAATAAACTTGTCAGTCTTAccg
atttttaaaataaatgaaatcaaCGAACAACATTTTATTTCAATCCTCTC
TTAGACTTTTCACTGTCTTCTGTTTCAGCTTTTGACGGGTTCTTACATGG
GTTTGACGTCAGTGGTTGCCATCAGTTTGTACATAGCTTTGTTGGCGACC
ACCTTTTCTCGGAAGTATCCACAAAGTGTAGCCATGGCGCTCATCATGCA
AGCGGAAAGATGCGTACAGGTGGAACGAATGATCCCTAAGAAAACACACT
TGAACATGAAAGCTTTCTTCCACGAAGACTGTGCACCTTTGGTAAGAATA
TCTTAGAGGAAAAGAATTATGACGgcaatttaatttggcagttgaaagat
attttttactAGAAATCATTGTTGAATAAGAATTAAACTTGTTTTGACAC
CTGAAATAGCACGAGTATGGGAAAcggttgaaaaaaatctaatttggtGG
ACATTTAATTAAAGGATGGTAAAAATAGGGCATTTTGAAGGGAACTTAAT
TTGGGGGATATTTTATCCAATATACGGGCTTGTCTCTTTTTCTATCTGCG
ATCccacaacaaaaaaatttagtcACAAAATTTAAACAGATAGCCCCGCT
GCCAATGCTTAGTTCGGATGTGATCAAGATTTGCTATGTTTCGCTAGATT
TATATTATTTCTTAACGATTCTTGTCCAGGTTGAGGAAATGAAAGGTNTG
TTTCGCTagatttatattattttttaacgATTCTTGTCCAGGTTGAGGAA
ATGAAAGGTGAATCAATCTCTATAGCAACTAACAACGCGACGTTGAGCAA
GTTGGATTTCAGTCGTTGGAGAGGTCGTCATGAAAACGAAATCGATGAAG
TTCGTTACAGTATGAGAGAATTGAATAAAAAGCAAGATCGTCTCGTTCAT
CAGTTCAGGTTTATTCTCGATAACCTtgacgatgatgatgatatGGTCAG
TGAAATATAGACTTTTTGGCTAAATCATCTGAAATTTGGTTTTGATAGGC
GAGGTGAATCATCGTCAGTAAAATGAGGCAATGATTTTTCCTGAATCTTT
TCATGAATATGGGACGGACGAAGCAATGGAATCTTGAACTTTGTGATAAA
GACAATATGGGAACTGGGGTTATCCACAGACTACAGTTTGTGATAAGAAA
TTCTTTTGACGTAGCAGTTATGGTGAAACTTTAAACATTTATATTTCAAG
ACACTATTTTTGGAACTGAGGAGAGCATTCACAAAATAAGTGAAACCATT
GAGCCCTTTTTAACGGTTAAAATAGTTTGGTCTCTTTACTACAAATTACG
TATTGTAGAAGCTATGAAATtcagtactctcgggtaccttatagccgggg
ggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008357XLOC_008357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014948-exon-sc0000201-1491911889:372240..372317TCONS_00014948-exon-sc0000201-1491911889:372240..372317Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:372240..372317TCONS_00014948-exon-sc0000201-1510915933:372240..372317Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:372240..372317TCONS_00014948-exon-sc0000201-1575043694:372240..372317Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:373369..373563TCONS_00014948-exon-sc0000201-1491911889:373369..373563Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:373369..373563TCONS_00014948-exon-sc0000201-1510915933:373369..373563Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:373369..373563TCONS_00014948-exon-sc0000201-1575043694:373369..373563Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:373871..374155TCONS_00014948-exon-sc0000201-1491911889:373871..374155Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:373871..374155TCONS_00014948-exon-sc0000201-1510915933:373871..374155Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:373871..374155TCONS_00014948-exon-sc0000201-1575043694:373871..374155Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:374370..374768TCONS_00014948-exon-sc0000201-1491911889:374370..374768Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:374370..374768TCONS_00014948-exon-sc0000201-1510915933:374370..374768Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:374370..374768TCONS_00014948-exon-sc0000201-1575043694:374370..374768Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:375336..375497TCONS_00014948-exon-sc0000201-1491911889:375336..375497Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:375336..375497TCONS_00014948-exon-sc0000201-1510915933:375336..375497Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:375336..375497TCONS_00014948-exon-sc0000201-1575043694:375336..375497Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:375840..376177TCONS_00014948-exon-sc0000201-1491911889:375840..376177Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:375840..376177TCONS_00014948-exon-sc0000201-1510915933:375840..376177Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:375840..376177TCONS_00014948-exon-sc0000201-1575043694:375840..376177Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:378850..379110TCONS_00014948-exon-sc0000201-1491911889:378850..379110Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:378850..379110TCONS_00014948-exon-sc0000201-1510915933:378850..379110Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:378850..379110TCONS_00014948-exon-sc0000201-1575043694:378850..379110Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:379311..379910TCONS_00014948-exon-sc0000201-1491911889:379311..379910Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:379311..379910TCONS_00014948-exon-sc0000201-1510915933:379311..379910Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:379311..379910TCONS_00014948-exon-sc0000201-1575043694:379311..379910Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:380118..380330TCONS_00014948-exon-sc0000201-1491911889:380118..380330Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:380118..380330TCONS_00014948-exon-sc0000201-1510915933:380118..380330Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:380118..380330TCONS_00014948-exon-sc0000201-1575043694:380118..380330Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1491911889:380781..381394TCONS_00014948-exon-sc0000201-1491911889:380781..381394Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1510915933:380781..381394TCONS_00014948-exon-sc0000201-1510915933:380781..381394Clytia hemisphaericaexon
TCONS_00014948-exon-sc0000201-1575043694:380781..381394TCONS_00014948-exon-sc0000201-1575043694:380781..381394Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:372240..381394 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.193339	0	0.0547271	0.026771	0.162955	0.154523	0.623501	1.00925e-07	0.956097	4.07068e-05	0	2.7216e-07	1.62535	0	0	1.08097e-05	0.718719	0	2.86452	1.89535	0.04949	1.92815e-06	0.99006	0	0	7.69809e-07	0	0	0	0.0546587
Blast
[Close]
BLAST of TCONS_00014948 vs. Swiss-Prot (Human)
Match: ANK2 (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4)

HSP 1 Score: 92.8189 bits (229), Expect = 9.174e-19
Identity = 65/215 (30.23%), Postives = 109/215 (50.70%), Query Frame = 3 
Query:  723 LKMVDRLIRNGANLNVTDKYGQTVMHEVAKNWHTDVAKYLIKRGAIYDAKDRYGRTPLHLASAVGHVEMIDFLVGQDHEKLKDVTKDERQTALHYAAKNNSVGALKVLLKLGASMNDRDYRLRTALHLAAENGRIEAARYLLSKNAPCAVYDDQGVSCLSIMV----QKMPGVAFLALQQFYAEDPANRKLYCYLNYLEKKLLADEELQISWKYL 1355
            L +V  L++NGA+ +VT+  G+T +H  A+    +V + L++ GA+ DA+ R  +TPLH+AS +G  E++  L+   H    D       T LH +A+   V    VLL+ GA+ +    +  T LH+AA+ G ++ A+ LL + A        G++ L +      QK   VA L L++  +     +  Y  L+   KK     ++QI+   L
Sbjct:  444 LNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLL--QHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQK---VALLLLEKGASPHATAKNGYTPLHIAAKK----NQMQIASTLL 649
The following BLAST results are available for this feature:
BLAST of TCONS_00014948 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANK29.174e-1930.23Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4[more]
back to top