TCONS_00014962 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014962
Unique NameTCONS_00014962
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length243

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014962 ID=TCONS_00014962|Name=TCONS_00014962|organism=Clytia hemisphaerica|type=transcript|length=243bp
AGCGAAACAGGTAATCAATTAGATATTTACATTTTAGTGTGGTGAACTGT
AATTAGCCGTTATCGTAAAAGATTTGGCGTGTCTTTCTTTCGATTCTGTA
CTTTGATCATATCAATGTTtcgatattcttaaattccagCCTGCACTCGA
TGGTCAATCTATTTCTCCGTGTTTAGGTTTGAGGCATGACATTCCGCTcg
cttttttctcttttctttttttcgttttagtcATACATTCTGA
Run BLAST on NCBI

transcript from alignment at sc0000201:168588..168830-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014962 ID=TCONS_00014962|Name=TCONS_00014962|organism=Clytia hemisphaerica|type=transcript|length=243bp|location=Sequence derived from alignment at sc0000201:168588..168830- (Clytia hemisphaerica)
AGCGAAACAGGTAATCAATTAGATATTTACATTTTAGTGTGGTGAACTGT
AATTAGCCGTTATCGTAAAAGATTTGGCGTGTCTTTCTTTCGATTCTGTA
CTTTGATCATATCAATGTTTCGATATTCTTAAATTCCAGCCTGCACTCGA
TGGTCAATCTATTTCTCCGTGTTTAGGTTTGAGGCATGACATTCCGCTCG
CTTTTTTCTCTTTTCTTTTTTTCGTTTTAGTCATACATTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008364XLOC_008364Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014962-exon-sc0000201-1575043694:168588..168830TCONS_00014962-exon-sc0000201-1575043694:168588..168830Clytia hemisphaericaexon
TCONS_00014962-exon-sc0000201-1510915933:168588..168830TCONS_00014962-exon-sc0000201-1510915933:168588..168830Clytia hemisphaericaexon
TCONS_00014962-exon-sc0000201-1491911889:168588..168830TCONS_00014962-exon-sc0000201-1491911889:168588..168830Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:168588..168830 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.03216	3.47172	2.32168	7.75518	8.01685	4.89329	13.0359	2.18045	0.45988	3.20293	1.45342	2.46086	3.35108	0	4.66559	1.62212	2.89637	0	3.68563	0.764241	1.7473	0	2.3844	2.76074	3.03252	6.20549	2.11371	2.70505	2.05304
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014962 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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