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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014978 ID=TCONS_00014978|Name=TCONS_00014978|organism=Clytia hemisphaerica|type=transcript|length=2031bp
gtttttaaagcttttcccagaaaattgatagttttcaaggttttcaaggt
tgggtggttcattttcaaggttttcaaggttttcaaggttttcaaggtcc
cgtagacaccctgtaaTAGCTGCCTCATTCCCGAGTCCTGTTTAAAATGT
TTGTCGTATTTTTCTTTTGTAGAATCTgtcaaacattaaaaaataattgt
aGAAACATCAAATAAAGTTTTAACAGAATGCTTCGCGGACAAAGCTCTAT
ACTGATAATTATCCTAGTCCTTGGACTTATTGTACTTTTGAGTGTGTTTA
GCTACAAGGATGGAtctcacattaaattcaaaattcaatcacCAATTAAC
ACCCAATCAAATGATTTAAATGATGTCAAAATAATACACGAAGAAGAACT
TCGTCATGTCCAAGAATTAAGAGAAATGGTGGGAAAGAATTCACTGTCGC
TCGATCAAATTGCAAAGTCTTTGAATATTTCATTCAGCAACAAAGTCAGA
CAGGAAAAGATAGGCACGATCGACAACCAAATCCCAAAACTGAACACACC
AATGCCCTCGCACCAATCTCAGATTAATGAGCCAAACGTTAAATTACTAA
ACGAGGAAGATTTGAAACCATCTAGCAGTCAAATTTTTTTCCTTGTCTTC
TCTCATATCGGAAATGTGGAAAGGCGTACTACCATCAGGCGTACTTGGGG
AAATCCTGATAATTTTCCTAAACAAAGAGCAATGTTTAAGAATGCGACAT
ACAAAGTGCTCTTCATAACTGGTTTTGTAGCCGACAAGATTAAAAAGGCG
AAAGAAGAATCAAAGAAACACGGGGATATGTTGATTACTAACCGAACTGA
AAATTATTTCGATATTTCACGAAGAACACAATTTGGTATACATTGGACAA
TCAGAAATTGCAAATTTGACTACTTCTTTAAAACTGATGATGATGTCTTT
GTAAGTATTCCGAATACCtacaaacttttttatcaagATGCTTTTGCTGT
TGAGCACAAGACTTCTTTATATGCTGGTTTAATGCATATGCGTGGTGGTC
CAATTCGAGACAAGAGATCTAAATGGtatattgacaaaaaactgTGGGGA
CAAACAATTTACGCTCCGTTTGCTACTGGGATGGCTATCATATTATCGAG
AAATGTTGCTGAGCGTATTGAACCATATTTCGAAtggaaaaatgttttcc
caCTTGAAGATGTCAATATTGGCTTTTATGTTTTCGTTGCAAAAGTACCA
AATATTGGAGTGAGGCCGTCCAAAGGAGCAGAATTTGTGCTTGATTACAC
TGTGGCAGTTTGTAGTCATTATAAAAGGGAAACTATAACTATGCACCCTG
TGAAGAATGAAGCGTGTATGAGAAAACTGGTGCAAGCAAGCCAGCAATAA
TTTCATAGACTGATGTTAAAGAATCCTGAACGCCTCTAGTATCGGCAACG
TTTGGTTACACCGATATCCCAAAAACATACTATTCTTAACTGGTAATCTA
CATAATCCCCTGTCTCAGTAATCTGACGAAACCTCTTGTGGCCAGTTGAG
TATATTTATCGAGGGCTTCTACAAGCTAAgaattttatagttttttaaat
gtttttatacaTGTTTTATATAGTTTTTATAGTTGCttgaaactttgagt
atcaagcaattcttatctcaacttcaatttattgtgTACATGTTTATATA
CAATATGGTGGTGTTCCACAAGGTTCTTTACTATACTAGGGAGGTTGACC
ATAGCCAAAAGATCGGTTACGCAAATTTGGAgataaacttttgttttgag
ttccttgatacttttaacaaaaaattgtctttataagttgtttctgaatt
gtctgaatttattctatcaagagtaatttagcaattaaattacaaaaata
tgacgttatgaaccttaaaaagacgttaataaaatattatattaccctct
tttacaaaaaatgccaagttttaatgggtaattaacctttttgttttgaa
tttttttttaatattctgcaaaagattgaac Run BLAST on NCBI protein sequence of TCONS_00014978-protein >TCONS_00014978-protein ID=TCONS_00014978-protein|Name=TCONS_00014978-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MLRGQSSILIIILVLGLIVLLSVFSYKDGSHIKFKIQSPINTQSNDLNDV
KIIHEEELRHVQELREMVGKNSLSLDQIAKSLNISFSNKVRQEKIGTIDN
QIPKLNTPMPSHQSQINEPNVKLLNEEDLKPSSSQIFFLVFSHIGNVERR
TTIRRTWGNPDNFPKQRAMFKNATYKVLFITGFVADKIKKAKEESKKHGD
MLITNRTENYFDISRRTQFGIHWTIRNCKFDYFFKTDDDVFVSIPNTYKL
FYQDAFAVEHKTSLYAGLMHMRGGPIRDKRSKWYIDKKLWGQTIYAPFAT
GMAIILSRNVAERIEPYFEWKNVFPLEDVNIGFYVFVAKVPNIGVRPSKG
AEFVLDYTVAVCSHYKRETITMHPVKNEACMRKLVQASQQ Run BLAST on NCBI transcript from alignment at sc0000201:413299..422614- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014978 ID=TCONS_00014978|Name=TCONS_00014978|organism=Clytia hemisphaerica|type=transcript|length=9316bp|location=Sequence derived from alignment at sc0000201:413299..422614- (Clytia hemisphaerica)
GTTTTTAAAGCTTTTCCCAGAAAATTGATAGTTTTCAAGGTTTTCAAGGT
TGGGTGGTTCATTTTCAAGGTTTTCAAGGTTTTCAAGGTTTTCAAGGTCC
CGTAGACACCCTGTAATAGCTGCCTCATTCCCGAGTCCTGTTTAAAATGT
TTGTCGTATTTTTCTTTTGTAGAATCTGTCAAACATTAAAAAATAATTGT
AGAAACATCAAATAAAGTTTTAACAGAATGCTTCGCGGACAAAGCTCTAT
ACTGATAATTATCCTAGTCCTTGGACTTATTGTACTTTTGAGTGTGTTTA
GCTACAAGGATGGATCTCACATTAAATTCAAAATTCAATCACCAATTAAC
ACCCAATCAAATGATTTAAATGATGTCAAAATAATACACGAAGAAGAACT
TCGTCATGTCCAAGAATTAAGAGAAATGGTGGGAAAGAATTCACTGTCGC
TCGATCAAATTGCAAAGTCTTTGAATATTTCATTCAGCAACAAAGTCAGA
CAGGAAAAGATAGGCACGATCGACAACCAAATCCCAAAACTGAACACACC
AATGCCCTCGCACCAATCTCAGATTAATGAGCCAAACGTTAAATTACTAA
ACGAGGAAGATTTGAAACCATCTAGCAGTCAAATTTTTTTCCTTGTCTTC
TCTCATATCGGAAATGTGGAAAGGCGTACTACCATCAGGCGTACTTGGGG
AAATCCTGATAATTTTCCTAAACAAAGAGCAATGTTTAAGAATGCGACAT
ACAAAGTGCTCTTCATAACTGGTTTTGTAGCCGACAAGATTAAAAAGGCG
AAAGAAGAATCAAAGAAACACGGTGATATGTTGATTACTAACCGAACTGA
AAATTATTTCGATATTTCACGAAGAACACAATTTGGTATACATTGGGCAA
TCAGAAATTGTAAATTCGACTATTTCTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAATACCTACAAACTTTTTTATCAAGATAC
TTTTGCTGTTGAGCACAAGACTTCTTTATATGCTGGTTTAATGCATATGC
GTGGTGGTCCAATTCGAGACAAAAGATCTAAATGGTATATTGACAAAAAA
CTGTGGGGACAAACAATTTACGCTCCGTTTGCTACTGGGATGGCTATCAT
ATTATCGAGAAATGTTGCTGAGCGTATTGAACCATATTTCGAATGGAAAA
ATGTTTTCCCACTTGAAGATGTCAATATTGGCTTCTATGTTTTTGTTGCA
AAAGTCCCAAATATTGGAGTGAGGCCATCCAAAGGAGCAGAATTTGTACT
TGATTACACTATGGCAGTTTGTAATCATTATAGAAGGGAAACTATCACTA
AGCACCCTGTGAAGAATGAAGCTTGCATGAGAAAATTGATGGAAGCAAGT
CTGAGATAATTCTTTCATGGCAGTTAGTTGATAATGTTAAGGAACACAAA
ATTCCAAGTCAGGGTGTTTTTTTAACGTTATTAACCCTTTCTTAATTCAC
CTCACTCTTGATACGCTGTATTGGGGAGGGGTGGTTTTTTTGAATTTTTC
TTCTGATAACTATACTTAATTATATTATTTTCATTTAAATTTTCATACAT
TGACGGACATTATAAAATCTCACTGATTTTCAACGAAAAAATCCATTGGG
AACTATGTAGTTATTTTTACAAAAAACATTCCTACATTTAAAATATATCA
CGTATAATTGTCATTGAATAATCTTGTAATATTTAATAGAATTTGTAATC
GCATCTTTATAATTGACTACACCTTTAACGTTGTTTGGGGTAACATTCCA
CTGCAAACCTTTTAGTGGTAAAAGAAGAAGACTCTGGGTAGCTGAAAAAT
GAGCCTTGGAAAGTTTGATAATCTCCTTACTCAACACGACATTTTCCGTA
TCTTTAGAAAAGAACCCTTTCTAGTCCTATTTCGGGTCCCAGGAAAATAA
TGGAAATATTCCGAAGTCAGCGGAATCTGAGTCAGGGAAGTCGAATCTTA
CCCCTTAATGACGGTACTTTTACTTTCCGCTGTCCTAGACGCTAGAGGTC
CTTTTTTGTCAGGCTAGTCGAGTAATTTTGATCGTATTACGGTTCGGGCT
AGACAGAAAACCCGTCCTGTATTTTTTAAATCTGATATAGGACGGGTTAG
AGCTGTGAGGCATTTTTCCGCCTGCTCAAAAAAATAACAGTAGGGAGTTC
GAATTTAACGCTGTCCTTACTTACTAAAATTAAAACCAATTTCGGAACTT
TCGTTAAGAAAGTGTGACCAGTGAAAGAATAACAAAATTTGATTGATTGT
GTTTTCAACTGTCATCAGGATCTGAGAAATTCAAACTCTCATCCCAAACC
ATGCTATTCATTTCGCCATCAATATATAAAAGAAAAAATCATAGCTTGTA
TCTCCAGGCTAGGTTAGGACCCATTCCAAGATATATTCACAGGCTTGAAA
AACTTCTTTATCTATTAAAACCCATTACCTGCCGATGTCGGCATATCCCG
ACATGACTTTCAATTTCTTTGCCGATGTCGGAATTTGCCGCATGAGCACT
TTCCATTTCTTTGCCGCAAAATTTAACACTTCTACAAAGATTTTGTATTA
GATGGTTTGAAATGAAAAAAGATAATAGTTAAAAGCTTTTCTATGTTCAA
AAATAACTATTCAACAATGTTCAACTCAAAATTATAGTCCTTGGCTGATA
CTTCGTATATTATTCAGAAAATGAAGTCAAAATCGCTACCTTTTGCCCAT
GTCGGCATATACCGACATCTGGCAAATAGGTCGAACCTTCTTTTTTTCCC
GTGGCAAATAGGTCGAACCTTAAAAATTACGCACGGTAGTTAAAGGGTTA
AGTACCTGAATGACCATGACGATAATATAATCTTTTTTAATAGCGGAATA
TCAAATGGATGTGAAATGAACACGCAGCAACTAAAACATACATGCTAAAT
AACTTGTTGTGGTAAAGTCCCTTTTCGGGAAGGGTTTAACGGATGTTGCA
TTGTATAAGTACTTTAAAGCACACCTTAGATTTTACAGAAATCATTCTTT
TGATTGAAAGCAACATTGTGGTAATTACAGTACAAAGCCAATGGGGCGCT
GAGTAAACTTCGACATTACGTCAACAAAAAACTTTAATATCATTGTAATT
TTCTCTCTTCCATTGTCATCTTTCATATGCAGCCCGAATTTGGGGCCAAC
GTCAAACTACTCATGCTCAACGAGTTCTTTTTCTTCAGAAGTAAGCTCTT
AGAATTATTTTTTACCTGATTTGCGTGCTTATTCTTTTTCCTATTTCGGT
TTCCTTTTCTCATATATCTGGTTTTTATGATTTTCGAGTTTGGTTTTGAA
TTTTCATTTCTTTATTGCTTTTTTATAAAAAAATTGATTCTCAATGCATC
CTAGTAAGATCTTAGAAACTATTTTTTCTTGTAACAGTAGCGTGCGGCCA
CCTCCTAATTTAGCCTCGTCTCTATGAGTGTGATAGCTTATCAAGACAAA
TAGATTACTTACTTACTTACTTAAACATTGGACATTATTAGAAAAATTGA
TTAAAATGGACAAGAGCATGAGGTTATTTAGCCAATTCTAATTTTCGGTT
TTCATATCATAGACCATTAGAAGGGGAATTTCTGGTTGCATATAATGCCA
ATAATTTAGTTTTTGGTTTTTGTTTGACAATGCACCTCGAACAAAGGCTA
TACCTTATCGGGGAAAAAAATGTCGGACGAAAATTTTGAGGGGGTGACGA
AATTTTCCCCCGAAGAAACATTACTCCAACATTTTATCACCCGACCGAAA
CTTGTACCCGATTTTTTTATTCCCGACCAAAACATTTACCCGAAATTTTA
TACTGCAACCAAAATTCAAATCTAATTTCTTTACACCTTAATTTACCGAA
ATTAGTGCTTTAAACGTCGAATTAAAAAAACAATTTTCGAGCTAGCATTT
CTTTAGGACAGTTTAGTCGGGTGAAAGTGACGAGTTTGAAATTTTGGTCG
GGGGAAAGTGACGAAAATGCCTCTAGGTGACGAAATTTTTTCCCGACGAA
AAAAAACCGACTAGATAAAAGTCCGACATTTTTACCCCAATAAGGTATAG
CTATACGCTTTTCTAAAATGATCTGTCGATGGTTCCAGAAATTACCGATC
TAAGAAGAGTTAATTTACTAGTTCGACCAATTCGCTTTCACCCCATGCGT
CGGAGTTAATTTTGAGATTGTTATTTTCTCATGCAGATTTCAATTCATGA
CAGGAATTAATATCATTTGTATCGTTTGTTTTGCCCTGCATTTTGTTGCT
GAAATAAAACCTAGCTTTAAGTGAGGTAATCGAGAGAGGATTTGAAAAAT
CTAGATAAAGGCCTTCTCTCATTCACCGATTGTAATTTGCTGTAATTCAT
TTTTTTATCGCTGACCTTGTACAAATAAAGAAAACTTTTTCTCTTCCTAC
TTTTCTCCACTTTTCTCACAGCCCTGGTGAAAACTTTTTCCTAGAGTGGG
GATAAAATAAAAATTATATTGAAATCTCAATGGGGATAAAAATTCTATCG
TTCCAAGGTTAAAATTCAGTGGGATGGTTTTGGAGAGCAACTTCTAAACA
ATGAATTACTCAGTGGGGCTGAAATTCCAAGGTATTTTCCCCAACGGGGA
CGAAATTTTGTCAAATTTTCCAGCGGGGCTGAGGGTCTGTGATACAGGGG
TGTTCCGACGTAATCGTCTTGTTTCGACGTTACTTATTCAGATCTAAGGG
AGCGGTCATTAAGTATAGCATATACCGGGGTGGAAGGGATTTTGGTAGGG
CATGAAATTTTTTTCCCTTATTTTGGGTAGGGTATGAAAAAAACTCGAGG
GCTTTGAGTAGGGCACGAAAATATTTTTAGCAGAATCTTATTTCAACAAA
AATTTCAATTTTGTCAATTCTAAAACTCCATTATTCTTGCGAACCCTGAA
ATCTGAGAAATTTTAAAGCGCCATAAAGCTGCCATCTGGTAAGGGGTAGG
GTAAGAAAATTTTCATCCAATTTTTGGTAGGGTATGAAATTTATTTGAGA
ACTTTTGGTAGGGTATGAAAATAAGAAGTCTGCCAAAAAAACCCTTCCAC
CCAGGTATATATTATACTTAATGACCACTTCCTAAGCAACAGCAAAAGGT
CCGCATCGTACATTTTTGTTATAAAGATTTGTTAACCGTTAGGAAAAACT
TGTTAAGGTGAAAATTCTTGAATACTACAGAAAGTTCTGTACTTTTTGAA
GCGATCGCCAAAAGTGCGTTTGAAACACGCTGATCTAGTATGTTAAGAAC
ATTCGTATTGTATTAGTTTATTTGATGTGCTTAAAAAAAAGACAATTACC
ATTTTTCATAAAGCATTTCTCATTAAATTTGTTCAAAATCAGATTAGCTC
AGAGAAAAATGACAGATTAAATCAGTCAACTTTTGTTCGGTTATGTTATG
ATACAATTATATATAATCTTTCTATCTTGTATCTGCATGTGGGTTTCATA
CAAAATGAAAGAAAGTTTTTAATGATATTATATATAGATTTATTTCGTTT
GGTATTAACGTAGCCCGGGGTCCACTTAGAGCTTTTTTATGTTTTTTTTT
GGCGCTGATAAGTGGCCCGGTAGTATATGGTAATATGCTTTTGCCTAGGC
GGACTGTAAAACAGTCCGCCAGATTTTAGTTGTATTTGGAAGGTAAAAAC
AGTATGAAGCAATATTTTTATTTGAGAATAAGGGATTGCAAATCTGTTAA
TCGTGTTTGTTTCTCATTTTTGATTATATCCTTCAACTCCAAGTAGTTTT
ATTGTTATTTTGATTTTAATTTTTTTTTATTCAAAATGGCGACCTCGCCA
AATGCTCCTAGTCTACTTCACTGGACTCAGCGTCATAAAAAATTATCAAA
AAGCAAAGTTCAGCCAGAAGTAGGCTCTAGTCTAGTATTAACGTAGCATA
GTTATAACGATAGCATGCAATGTTGTTTGGTTTGATATATTTTGAAATAA
GAGAGGTTATTGGGATCGTCGACTGGGGGTGGGTGTTATGTTCCCTCCTT
AGGGCGGGGGTGATTTTCCTAATCTCTAAACAGGAGAATCTTCTGTAGCT
TGCATATGCAAGCTCTAAGGTTTCATCTGTCTTTTATGTTACCTACCGCT
TGGTCATCATAGATGTTTGTTATTTAAAAGGTCGGCTAATTTTAGTTGTG
AACAACTGAATTGACAAACATGCGTGCAATGTCTTGCGATCTTGGACAGC
AAATTTATTTATCAAAACCAGGCGATTGACCAGAAACACAAAACGAAAAT
AACACCTTAAAGATCGGATATCAAGGTTTAAATTTTTAGTTCAAAATTAT
GATTTGGGCTAAAAGTTTAAATAAATAAGGAAAGGAATGTTATGATTCTT
GACTTACAATAAATTCATATAGAAATGATATGATTTGGAGGATATGAATG
TTAATTTATTACTTTCAGGAAATATGGCGCGTTTCATAGACTTTCAGCTG
TTTTTTTTGGGGGGCTTGGTGGTAAATATGATTTCTAAAATCACTAGCAA
CCTTTTGAGCTGCTTTAGCGAACAAATTTACACCGCAAACCATCGAACCA
CCATTCACGCCCTATTACTGGGACCTTATTTCGGGTTTTCTTTGAGCACC
CCTGTCTCGCAGCCCCGGTATGGAACTTCTTTCCACAGCAGGGATAAAGA
TTTATATCGAAATCTCAATGGGGTTGGAAATTCTATTATTCCAAGCTTAA
AAAATCCATTGGGAATTGGTTTTGGAATGCAATATTTGTTCCATCGAATT
TCGAATGAGGATGAAATCAAAGTCAATTTCCCAGTGGGGCTGAAATTGTA
TGGTATTTTTTCCTTCGGGGACCAAATTTTGGCAAGATTTTCAAGCGGGT
CTCTGGGATGTCTTTGAAAATCCAATACATTAGACTTATAAAACTTGATC
AGGTTCCAGATTTTCAGTTCTATCAGGAACTGAAGTTATAAAATTGTAAA
AAAGATCAAAGAAAAAGTAGATACCGGTATTCCAAATTCTCTCGGGTAAA
TTAATGCGTGTCCAAATTTTCATTAATTTCTCGGAGGCAATTCCACCCCT
CCTAGCATAAAAAATTATACATTTAAAAGAAGCGCATTATGTAGAACATG
AAAATCGGTGTTACTTAAATTTAGGTTTTGCCAATTTTGCGAAAAACCGC
AAAAACCAAAAAATGCTGACGTCAGCAAAATTTGTTTTTTAGATAACTCC
AGTTTGGCTAATGGTATAAACATGAAATTCGGACCAAAGTTGCATATCAT
TGATAAAAATATTTTTGCATAATCCTTTTTTTCAAATTTTGCTGACGTCA
GCAGAAATCATTTGATGTAAACGTCATAGACAAGAAAAGCATCTCACATA
TATAAAATATTTTCCAAATCTTTCCATTTTTAGGTCGTATCTGTCGAACA
AATAAAATTAACACAAACATCGACTGATTCAGAATGTTTCGAGGACAAAA
CCCTTTGTTGTTGATCATTCCAGTACTTGGAGTCATTGTACTTTTGAGTT
TGTTTACATTCAAGGATAGCTCTTACGTAAAATTCACTCCGACCAACACC
CAATCAAATGATTTGAGTGATGTCAAAATAATACACGAAGAAGAACTTCG
TCATGTTCAAGAATTGAGAGAAATGGTCGGTAGAATTGCAAGTTCATTGA
ATGTCTCATTCAACCACAAAGTCGCGCAAAACAAAAAGATAGATAAACCT
AACATGGGTAACATGAAAACAAGTGAGTCATTCTCACAGCGTTCACAGCA
AACTCAGATTAAAGAACCCAACGTTAGATTACTAAACGAGGAAGATTTGA
AACCATCAAGCAGTCAAATCTTATTCCTTGTTTTCTCTCATATTGGAAAT
TATGAAAGGCGTACAACCATCAGGCGTACTTGGGGAAATCCTGATAATTT
TCCTAAACAAAGAGCAATGTTTAAGAATGCAACATACAAAGTGCTCTTCA
TAACTGGTTTTGCAGCTGACAAGATTAAAAAGGCGAAAGAAGAATCAAAG
AAACACGGGGATATGTTGATTACTAACCGAACTGAAAATTATTTCGATAT
TTCACGAAGAACACAATTTGGTATACATTGGACAATCAGAAATTGCAAAT
TTGACTACTTCTTTAAAACTGATGATGATGTCTTTGTAAGTATTCCGAAT
ACCTACAAACTTTTTTATCAAGATGCTTTTGCTGTTGAGCACAAGACTTC
TTTATATGCTGGTTTAATGCATATGCGTGGTGGTCCAATTCGAGACAAGA
GATCTAAATGGTATATTGACAAAAAACTGTGGGGACAAACAATTTACGCT
CCGTTTGCTACTGGGATGGCTATCATATTATCGAGAAATGTTGCTGAGCG
TATTGAACCATATTTCGAATGGAAAAATGTTTTCCCACTTGAAGATGTCA
ATATTGGCTTTTATGTTTTCGTTGCAAAAGTACCAAATATTGGAGTGAGG
CCGTCCAAAGGAGCAGAATTTGTGCTTGATTACACTGTGGCAGTTTGTAG
TCATTATAAAAGGGAAACTATAACTATGCACCCTGTGAAGAATGAAGCGT
GTATGAGAAAACTGGTGCAAGCAAGCCAGCAATAATTTCATAGACTGATG
TTAAAGAATCCTGAACGCCTCTAGTATCGGCAACGTTTGGTTACACCGAT
ATCCCAAAAACATACTATTCTTAACTGGTAATCTACATAATCCCCTGTCT
CAGTAATCTGACGAAACCTCTTGTGGCCAGTTGAGTATATTTATCGAGGG
CTTCTACAAGCTAAGAATTTTATAGTTTTTTAAATGTTTTTATACATGTT
TTATATAGTTTTTATAGTTGCTTGAAACTTTGAGTATCAAGCAATTCTTA
TCTCAACTTCAATTTATTGTGTACATGTTTATATACAATATGGTGGTGTT
CCACAAGGTTCTTTACTATACTAGGGAGGTTGACCATAGCCAAAAGATCG
GTTACGCAAATTTGGAGATAAACTTTTGTTTTGAGTTCCTTGATACTTTT
AACAAAAAATTGTCTTTATAAGTTGTTTCTGAATTGTCTGAATTTATTCT
ATCAAGAGTAATTTAGCAATTAAATTACAAAAATATGACGTTATGAACCT
TAAAAAGACGTTAATAAAATATTATATTACCCTCTTTTACAAAAAATGCC
AAGTTTTAATGGGTAATTAACCTTTTTGTTTTGAATTTTTTTTTAATATT
CTGCAAAAGATTGAAC Coding sequence (CDS) from alignment at sc0000201:413299..422614- >TCONS_00014978 ID=TCONS_00014978|Name=TCONS_00014978|organism=Clytia hemisphaerica|type=CDS|length=2346bp|location=Sequence derived from alignment at sc0000201:413299..422614- (Clytia hemisphaerica)
GCGAAAGAAGAATCAAAGAAACACGGGGATATGTTGATTACTAACCGAAC
TGAAAATTATTTCGATATTTCACGAAGAACACAATTTGGTATACATTGGA
CAATCAGAAATTGCAAATTTGACTACTTCTTTAAAACTGATGATGATGTC
TTTGTAAGTATTCCGAATACCTACAAACTTTTTTATCAAGATGCTTTTGC
TGTTGAGCACAAGACTTCTTTATATGCTGGTTTAATGCATATGCGTGGTG
GTCCAATTCGAGACAAGAGATCTAAATGGTATATTGACAAAAAACTGTGG
GGACAAACAATTTACGCTCCGTTTGCTACTGGGATGGCTATCATATTATC
GAGAAATGTTGCTGAGCGTATTGAACCATATTTCGAATGGAAAAATGTTT
TCCCACTTGAAGATGTCAATATTGGCTTTTATGTTTTCGTTGCAAAAGTA
CCAAATATTGGAGTGAGGCCGTCCAAAGGAGCAGAATTTGTGCTTGATTA
CACTGTGGCAGTTTGTAGTCATTATAAAAGGGAAACTATAACTATGCACC
CTGTGAAGAATGAAGCGTGTATGAGAAAACTGGTGCAAGCAAGCCAGCAA
TAAATGCTTCGCGGACAAAGCTCTATACTGATAATTATCCTAGTCCTTGG
ACTTATTGTACTTTTGAGTGTGTTTAGCTACAAGGATGGATCTCACATTA
AATTCAAAATTCAATCACCAATTAACACCCAATCAAATGATTTAAATGAT
GTCAAAATAATACACGAAGAAGAACTTCGTCATGTCCAAGAATTAAGAGA
AATGGTGGGAAAGAATTCACTGTCGCTCGATCAAATTGCAAAGTCTTTGA
ATATTTCATTCAGCAACAAAGTCAGACAGGAAAAGATAGGCACGATCGAC
AACCAAATCCCAAAACTGAACACACCAATGCCCTCGCACCAATCTCAGAT
TAATGAGCCAAACGTTAAATTACTAAACGAGGAAGATTTGAAACCATCTA
GCAGTCAAATTTTTTTCCTTGTCTTCTCTCATATCGGAAATGTGGAAAGG
CGTACTACCATCAGGCGTACTTGGGGAAATCCTGATAATTTTCCTAAACA
AAGAGCAATGTTTAAGAATGCGACATACAAAGTGCTCTTCATAACTGGTT
TTGTAGCCGACAAGATTAAAAAGGCGAAAGAAGAATCAAAGAAACACGGG
GATATGTTGATTACTAACCGAACTGAAAATTATTTCGATATTTCACGAAG
AACACAATTTGGTATACATTGGACAATCAGAAATTGCAAATTTGACTACT
TCTTTAAAACTGATGATGATGTCTTTGTAAGTATTCCGAATACCTACAAA
CTTTTTTATCAAGATGCTTTTGCTGTTGAGCACAAGACTTCTTTATATGC
TGGTTTAATGCATATGCGTGGTGGTCCAATTCGAGACAAGAGATCTAAAT
GGTATATTGACAAAAAACTGTGGGGACAAACAATTTACGCTCCGTTTGCT
ACTGGGATGGCTATCATATTATCGAGAAATGTTGCTGAGCGTATTGAACC
ATATTTCGAATGGAAAAATGTTTTCCCACTTGAAGATGTCAATATTGGCT
TTTATGTTTTCGTTGCAAAAGTACCAAATATTGGAGTGAGGCCGTCCAAA
GGAGCAGAATTTGTGCTTGATTACACTGTGGCAGTTTGTAGTCATTATAA
AAGGGAAACTATAACTATGCACCCTGTGAAGAATGAAGCGTGTATGAGAA
AACTGGTGCAAGCAAGCCAGCAATAAATGCTTCGCGGACAAAGCTCTATA
CTGATAATTATCCTAGTCCTTGGACTTATTGTACTTTTGAGTGTGTTTAG
CTACAAGGATGGATCTCACATTAAATTCAAAATTCAATCACCAATTAACA
CCCAATCAAATGATTTAAATGATGTCAAAATAATACACGAAGAAGAACTT
CGTCATGTCCAAGAATTAAGAGAAATGGTGGGAAAGAATTCACTGTCGCT
CGATCAAATTGCAAAGTCTTTGAATATTTCATTCAGCAACAAAGTCAGAC
AGGAAAAGATAGGCACGATCGACAACCAAATCCCAAAACTGAACACACCA
ATGCCCTCGCACCAATCTCAGATTAATGAGCCAAACGTTAAATTACTAAA
CGAGGAAGATTTGAAACCATCTAGCAGTCAAATTTTTTTCCTTGTCTTCT
CTCATATCGGAAATGTGGAAAGGCGTACTACCATCAGGCGTACTTGGGGA
AATCCTGATAATTTTCCTAAACAAAGAGCAATGTTTAAGAATGCGACATA
CAAAGTGCTCTTCATAACTGGTTTTGTAGCCGACAAGATTAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014978-exon-sc0000201-1575043694:421818..422614 | TCONS_00014978-exon-sc0000201-1575043694:421818..422614 | Clytia hemisphaerica | exon |
| TCONS_00014978-exon-sc0000201-1575043694:413299..414532 | TCONS_00014978-exon-sc0000201-1575043694:413299..414532 | Clytia hemisphaerica | exon |
| TCONS_00014978-exon-sc0000201-1510915933:421818..422614 | TCONS_00014978-exon-sc0000201-1510915933:421818..422614 | Clytia hemisphaerica | exon |
| TCONS_00014978-exon-sc0000201-1510915933:413299..414532 | TCONS_00014978-exon-sc0000201-1510915933:413299..414532 | Clytia hemisphaerica | exon |
| TCONS_00014978-exon-sc0000201-1491911889:421818..422614 | TCONS_00014978-exon-sc0000201-1491911889:421818..422614 | Clytia hemisphaerica | exon |
| TCONS_00014978-exon-sc0000201-1491911889:413299..414532 | TCONS_00014978-exon-sc0000201-1491911889:413299..414532 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000201 | supercontig | sc0000201:413299..422614 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002659 | Glyco_trans_31 |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008378 | galactosyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006486 | protein glycosylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006486 |
protein glycosylation |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0008378 |
galactosyltransferase activity |
Blast
BLAST of TCONS_00014978 vs. Swiss-Prot (Human)
Match: B3GT1 (Beta-1,3-galactosyltransferase 1 OS=Homo sapiens GN=B3GALT1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.410e-20 Identity = 71/240 (29.58%), Postives = 115/240 (47.92%), Query Frame = 3
Query: 669 ERRTTIRRTWGNPDNFPKQRAMFKNATYKVLFITGFVADXXXXXXXXXXXH--GDMLITNRTENYFDISRRTQFGIHWTIRNC-KFDYFFKTDDDVFVSIPN-TYKLFYQDAFAVEHKTSLYAGLMHMRGGPIRDKRSKWYIDKKLWGQTIYAPFATGMAIILSRNVAERIEPYFEWKNVFPLEDVNIGFYVFVAKVPNIGVRPSKGAEF-VLDYTVAVCSHYKRETITMHPVKNEACMR 1373
+ R IR TWG+ +NF K LF+ G AD + E + D+++ + ++Y +++ +T G+ W C K Y KTD D+FV++ N YKL + + + + G + + GGPIRD RSKWY+ + L+ + Y PF +G I S +VAE I + LEDV +G + +G+ P + + F ++C + R IT+H + E R
Sbjct: 92 DARQAIRETWGDENNF-------KGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKP---STKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDVYVGLC-----LRKLGIHPFQNSGFNHWKMAYSLCRY--RRVITVHQISPEEMHR 313
The following BLAST results are available for this feature:
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