|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015112 ID=TCONS_00015112|Name=TCONS_00015112|organism=Clytia hemisphaerica|type=transcript|length=1472bp
gttaaaatgcattaaaaatggcattctcagtttcagttgctaaattccat
gatggtaatattcttaccatgttcttaattttttggccattttcatcatg
gacattcttataaagtgtattcttataaaaaagcgtgtacctttAAAAGA
TTAATTTCTATAAAGATTCTTTCTAGTCTAAAGTAAGATTCAATGGCCTC
TTCAAATGGGTTATTTTCTCCCACTGGCCCGtaacaaaatgaaattttta
aaaagtctctttttttgttttcaaaaatgaacaTGGATTTTTGGAGACAT
GCACAGGTCTGCTATAAATTCTAACTCAAAAAATTTCAGAgggaaaggta
aaaaaaaaatctttttattgcTATTGGTTTCCCGaacgaaaataaaataa
aggaCTTTATGTTATTTGCTCCAATGTGGTTATTTTCATAGTAAACTAAA
TATACAAAATTTGTTCTATTTATATACCCATGTGATCTTCTAGTCACGTG
GTCAAAACCGTCAATCATATTTCATATAGTTTTCCATcagaaattcaatt
ttaaaagttaatttgctcaaaatctttttctttaaaacaagGGACCCTTT
AACTTTTTTAGGTATTTCAACACCTCTTGtcgtaaaatattttcttatgt
AGACGTGCACGACCTTGCCGGTTCTAGCCAGATCTTGCAAGAAATGACAC
AAGATCTTACCAAACTCTTGCAAGAAACTTCAAATAAGAAATTGAAGAGC
CACATCTTCTAAACTCTCATAAGATCTTAACAAGTTTTTTGACCAGGGAT
AGCATTTATGATTTTGCGCGTTTTCGTTTTGCATATGAAAGCCGCACTAG
GACAAAAGCCTGGGGGCACTATGTCGATATATCGGCATGTATTGCCAAAA
AATTTGCATTGGAAAtcaaacccttacagtgcagaccTTGAGCAGTAAAA
AGGTGCCTTTATAATGCATTTTACCGAATTTTTCTGACCCTTTCAGCGTA
GTTAggttcatatcttattttgctgaagctaCCTAAAGATGACTCTGAAA
TGGCGACACATTGTGTAGAACGAATCAAAATGGGTACAAGTCAAAGACAG
ACCAGgcttaaaaatatatatgataattttatgacttttttatttttagc
tgtCCACCGGAATTATGGATTCGCTGGCTCATATTCTCGTATTATATGAA
TCTGAAATGGTAAAATAGATTGCAAGTAAATCAAATGGATCTTACAAAAC
CTTGAAGAAAAGAGTAGTGAATGTCATTACTACGACGTGTCAAATATAAA
CATATCTATCCAAGTGCTACTGTAGAACAAAAGCATCAAGAATTTAGAAT
CACAGTTATTCAAGAGATTCTTATATTCATTTTATTCGTCAAGTTTTTGT
TTGCAAATTACTTTACCAAGATCTGTAATCTTAATAGCCTGCCTCAAAAG
TATGTGAACACTTAAGATTTAG Run BLAST on NCBI transcript from alignment at sc0000204:416384..417855+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015112 ID=TCONS_00015112|Name=TCONS_00015112|organism=Clytia hemisphaerica|type=transcript|length=1472bp|location=Sequence derived from alignment at sc0000204:416384..417855+ (Clytia hemisphaerica)
gttaaaatgcattaaaaatggcattctcagtttcagttgctaaattccat
gatggtaatattcttaccatgttcttaattttttggccattttcatcatg
gacattcttataaagtgtattcttataaaaaagcgtgtacctttAAAAGA
TTAATTTCTATAAAGATTCTTTCTAGTCTAAAGTAAGATTCAATGGCCTC
TTCAAATGGGTTATTTTCTCCCACTGGCCCGtaacaaaatgaaattttta
aaaagtctctttttttgttttcaaaaatgaacaTGGATTTTTGGAGACAT
GCACAGGTCTGCTATAAATTCTAACTCAAAAAATTTCAGAgggaaaggta
aaaaaaaaatctttttattgcTATTGGTTTCCCGaacgaaaataaaataa
aggaCTTTATGTTATTTGCTCCAATGTGGTTATTTTCATAGTAAACTAAA
TATACAAAATTTGTTCTATTTATATACCCATGTGATCTTCTAGTCACGTG
GTCAAAACCGTCAATCATATTTCATATAGTTTTCCATcagaaattcaatt
ttaaaagttaatttgctcaaaatctttttctttaaaacaagGGACCCTTT
AACTTTTTTAGGTATTTCAACACCTCTTGtcgtaaaatattttcttatgt
AGACGTGCACGACCTTGCCGGTTCTAGCCAGATCTTGCAAGAAATGACAC
AAGATCTTACCAAACTCTTGCAAGAAACTTCAAATAAGAAATTGAAGAGC
CACATCTTCTAAACTCTCATAAGATCTTAACAAGTTTTTTGACCAGGGAT
AGCATTTATGATTTTGCGCGTTTTCGTTTTGCATATGAAAGCCGCACTAG
GACAAAAGCCTGGGGGCACTATGTCGATATATCGGCATGTATTGCCAAAA
AATTTGCATTGGAAAtcaaacccttacagtgcagaccTTGAGCAGTAAAA
AGGTGCCTTTATAATGCATTTTACCGAATTTTTCTGACCCTTTCAGCGTA
GTTAggttcatatcttattttgctgaagctaCCTAAAGATGACTCTGAAA
TGGCGACACATTGTGTAGAACGAATCAAAATGGGTACAAGTCAAAGACAG
ACCAGgcttaaaaatatatatgataattttatgacttttttatttttagc
tgtCCACCGGAATTATGGATTCGCTGGCTCATATTCTCGTATTATATGAA
TCTGAAATGGTAAAATAGATTGCAAGTAAATCAAATGGATCTTACAAAAC
CTTGAAGAAAAGAGTAGTGAATGTCATTACTACGACGTGTCAAATATAAA
CATATCTATCCAAGTGCTACTGTAGAACAAAAGCATCAAGAATTTAGAAT
CACAGTTATTCAAGAGATTCTTATATTCATTTTATTCGTCAAGTTTTTGT
TTGCAAATTACTTTACCAAGATCTGTAATCTTAATAGCCTGCCTCAAAAG
TATGTGAACACTTAAGATTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015112-exon-sc0000204-1491911889:416384..417855 | TCONS_00015112-exon-sc0000204-1491911889:416384..417855 | Clytia hemisphaerica | exon |
| TCONS_00015112-exon-sc0000204-1510915933:416384..417855 | TCONS_00015112-exon-sc0000204-1510915933:416384..417855 | Clytia hemisphaerica | exon |
| TCONS_00015112-exon-sc0000204-1575043694:416384..417855 | TCONS_00015112-exon-sc0000204-1575043694:416384..417855 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000204 | supercontig | sc0000204:416384..417855 + |
Blast
The following BLAST results are available for this feature:
|
