TCONS_00015118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015118
Unique NameTCONS_00015118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1919

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015118 ID=TCONS_00015118|Name=TCONS_00015118|organism=Clytia hemisphaerica|type=transcript|length=1919bp
CGGggttcattttgaattttgttggATTGAATGGCAAAGGTTACCATCCT
GTACCAACTTTTTTCAATCGAAAATATCCAAATGGGTCGAACGTAGATGC
AAATCGCCCTGATTTTAAAATGGAAGGACCTTTCAACAATAATATTGACC
TTGATAACATGAAAGCTTTGCTGAAAGTTTGGCCAGAAGAAGTCGAAAAT
GCAGGACAAGTGACAGTTCTATGGGAGGGAATTCCCAATCCAACCAAAAC
AGATAAAATTGGATATTATTGTCCTTATTATGACAACCCTACACATGGAC
TTGATTATATTGATGTCACAAAATCACCAACTTGGCAAGAAGGATATGGT
TATTATACAGTCAAGTTATACAACATGCGATCTCCTTGTGCATTCAGATA
TTATATTGGTGGCAAAACTTTAGTTGCCATTAGTAACAAAGTGAGGTTTA
CAAATGGCGACGCTTTTGCACCTCTTCAAGTTCACTTGGCAATGACTGGG
AAAGAAACAGAGATGAGAGTTATGTGGAATTCTGCTAAAGtttctgaagG
CATCCAAGTGCGTTATGGTAAAACAAAAGACCTTGACAAAACACAAACGA
AATATACATCCAAAACATACAAAGGCTCGGAAATGTGTGAATCTCCTGCC
AACACAACTGGATTTTGGGATGCTGGATATACTTATGATGTTTTGTTGAC
CGGTTTAGAACCAAATACAAGATATTATTACTCTTGTGGTACCAAAGAGT
TCATGTCAGCGGTAAACAACTTCACTACACCATTGAAATCAGGAGATAAA
ACACCCTTCAACTTTCTCGTCTACGGAGACCTGGGAACAAGTTCGAACGC
TGTGCTGACCGCAAAATATTCCCGAAATGAGATTAACGACCGTGACGTCA
AATTCGTTTTTCATATTGGAGATATTTCGTATGCCAGAGGATATGCATAT
CTTTGGGACCAATGGTTTGACCAGATCCAGCCTTATGCATCTTTGATCCC
TTACATGGTTGGCATAGGAAACCACGAATATGATCATATAAATGGACATG
AAAAAGACCCTTCAAAACAACCCAACTTTCGTCCTTCATGGTTCGATGGT
CACACTGACTCTGGTGGTGAATGTGCTGTCCCTATGGTCAATAGATTTCA
CATGCCCGAGAATGGACTCGGTCTATTTTGGTACAGCTACGACTATGGTA
TGGTACACATGATCATGTTAAGCTTCGAACATGACTTTCGCCCAGGATCA
CCTCAATATATTTGGCTGGAGAAGGATTTGAAGAGTGTAGACCGAACGAA
AACACCTTTTGTCATGGTTGGAGCACACCGGCCAATGTATTGCAGTGAAG
CAGTATATATTGATTTTGTTATCGCACTTCGATTACAACAATATTTGGAA
GATTTACTGTACACATATAAAGTCGACGTTTGTCTGTGGGCACACTACCA
TTCTTACGAAAGAACATGCAAAGTGTACCGCAACGAGTGCCGAAAAGACG
GTATTTTGCACTTGGTAGTCGGTGCAGGGGGTCAGTACCTAGATGTTGAT
AAATGGTATCCAAAGGAATGGTCTGTATACCATGATCATAATTACGGTTA
TGGTAGATTTTCCGTCAAAAATTCAACGCATATTTTCTTCGAGTTTGTTC
AAGATAGTGTCGATAAAGTCGTCGATTCTGTGTGGATCACTAAATGAACG
aattaattatttaaaaaatttatgtatgaaaaaagttatttttaaatttg
aatcaGCCGATTGATGAATAATTCATTATCTTAAAGCAGTTTGTATGTAA
GATAAAATCTTATGCTAAGATTAAATTATGTAATTTTCTAGCTAATTTAT
CTCGAAGTTTTATTAACATTGTTCCTTTTTAAAAGGATTTTACATGTTGT
GTGCAGTGGACCTTTAAGC
Run BLAST on NCBI

transcript from alignment at sc0000204:15977..27847-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015118 ID=TCONS_00015118|Name=TCONS_00015118|organism=Clytia hemisphaerica|type=transcript|length=11871bp|location=Sequence derived from alignment at sc0000204:15977..27847- (Clytia hemisphaerica)
CGGGGTTCATTTTGAATTTTGTTGGATTGAATGGCAAAGGTTACCATCCT
GTACCAACTTTTTTCAAGTAGGTGGAATTATTTTCTCTTGACAAAGCGAA
ACCTCTGCTCAGTCATCATGTATATCGCATAACTTCAAATGAGAACCAAC
TTTTCGACACCTTCGTTCAGGAGTTTGTTCAATGATGGTCACTACGATTA
ATTTAGGGTTCCCTATATGGTTCTTATGCTTTCTGCTTTTCGTTTTGCAC
TGTGTACACTTATTTGCAAGTCGTTTTTAACCCAAAATATTTTGAACACT
TTTTTTTATATATATAAGAACATAAGGCTTCGATGGCCGAAATATTAAGA
ACAATTTAAGAACATTAGATTACAAGAACATTAGGAACATTTTTAGACTT
AAAACTCAAAAAGTTAAGAACATCCCAAGGCTTCAAAAATTTTGGATGTT
CTTATGAAAAACACGTGTAGTAACGGGATTTTTACGTCAGAAATTCTGTA
TTATTCATCTTTCAGTCGAAAATACCCAAATGGGTCGATGGTGGATGCAA
ATCGCCCTGATTTTAAAATGGAAGGACCTTTTGAAAATAATATGGATCTC
AATAATATGAAAGCTTTGCTAAAAGTTTGGCCAGAAGAAGTCGAAAATGC
AGGACAAGTGACAGTTCTATGGGAGGGAATTCCCAATCCAACCAAAACAN
CTGTGTGTCTGTGTGTGTGTCTGTCTCTCTGTCTGTCACAAAAACTTTAG
GGCAGCCTGGAGACTTTAAAAATGCTTGGATTTGGCTGAAATTCGGCACA
CTTGTTCCTTGGGTGAATATCTGGGTTTTTTTTTTCATTTTTCAAAAATT
TTGTTTTTTGGGGCCTGGGGACGAGTTTTTCGCCAAAACGAGGCTAAAGC
TTTGGGGCAGCCTGGAGACGTTAAAAAATGTTGGATTTGGCTGAAATTTG
GCTCACTTGTTCATTGGGTGAATATCTGGGGTAATTTTTTCATTTTTCAA
AAATTTAGATTTTTGGGGCCTGGGGACGAGTTTTTCGCCAAAACGAGGCT
AAAACTTTGGGGCAGTCTGGAGACGTCAAAAATTGTTGGATTTGGCTGAA
ATTCGGCACACTTGTTCCTTGGGTGAATATCTGGGGGTCTACAATTGGGC
CTATAATTTGAAGCCACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTCGA
CTATTTTAAATTAGAACCAACATGGAGGTATAAAGAAAAACAGGAGATTT
ATGTTATTATAACCACCCTCTTCATACGATTAAAGTTAAGAGATTTGCAT
GCTCATTATGGTATATTGTGTATTTTTAATGAGCTCTTTGTTCATTGGTG
AAATCTTATTGGCTCATTTAAGTGTTAGAAAAAAGATGAGACGAGATCCA
TTCTTTCTTATATCTGCTTATATCGGTGTAAGAAAATATTTGAACACCGT
TTTTATAAACGATAAAAACGTGTCAAACTCTTCATTAAAAAAAAAACGTC
TGTAGATTAATCAAATTCAATTGTTTCATTTATCAGTCGCTGAAGGCATC
CAAGTGCGTTATGGTAAAACAAAAGACCTTGACAAAACACAAACGAAATA
TACCGTCAAAACTTACAAAGCTTCAGACATGTGTGAACCTCCTGCTAACA
CAACTGGATTTTGGGATGCTGGGTATATTTATGATGTTTTGTTGACTGAC
TTGGAACCCAACACGAAATATTATTACTCCTGTGGTAGTAGAGAGGTAAA
CAATTAAATACAATTTGGCTAAAAAAACCACACATTTCTGATATCGAAAT
AGGTTGCACTCTCCACTCTTTTTTTTATAAGAGAAATCCGTTTAGAAGAG
ATGGTAAATTTTAGTTCAAATGAAAAGGAGAGCTGTTTAATGCAGGCTTT
ACACTGGACGAAACCCATATCACTTCATATGTATCATTTTTCTGAATCTT
CTATAATATTCTCTTTCAGATTATGTCATCTGTTTACAACTTCACCACCC
CTTTGAAAGGAGGAGACAGAACGCCCTTCAATTTCATTTCTTACGGGGAC
ATGGGGACCAGTTCTTTCGCCGAACAAACAGCCAAATTGGTTCACCAAGA
GATCAATGAGAATGATATCAAATTTGTTTACCATGCAGGGGACATCTCTT
ACGCTCGTGGATATGTAAGAAATCATTTTAAATCACATTTGAAAATCTTT
GAAAGAAAATCATTAATTTGAGTGAAAACCTGGCATCGTTTGCAACTACA
AAGTTAGTTTTTTTCTCTATGTACTATGTACTAAAGAATGTCACTTTTAC
TCTACAGTGTGTCCCAAAAAAGCGGACAAATTTTTGATTGAAGTAGAATC
CTCAAAACTCATTATCTCAAGTGAGTTTAGAATAATTGAAGTAAGATTAA
AATTCTTTGTTCAATCGATGGATATATAATTCTCAAGATAATTGAGTATG
TTTTTGAGATTGAAATATTAAGTATATAAGTCACAAAATTTCACATGGAT
ACGAGGATTTTACTTTATATGAAATTTTGTCTGTTTTTTTTGGAACATTG
TATTTTAACATTCTTAAAATTGTCTTGATTATTCAGGCGTATATTTGGGA
TCAATGGTTCGATATGATTCAGCCAATGGCATCAGTTGTTCCTTACATGG
TCTCTCTTGGAAATCATGAATATCAACATCTGATTGGATGGGAGAAAGAA
CCTTTCCACTTTCCACCCTTCAAACCATCATGGTTCAATGCTGGTAGAGG
ATCTTTTGGTGAATGTGCGAAACCCACGCTCAATCGTTTTCACATGCCTG
AAAATGGACTGAGCTTGTTATGGTATGTCTATAAACCCTTCAAACCTGAA
AGACGCCTATGCTCTTTTTTTTTAAGAGTATAAAGATAGTTGTAAAAGTT
GGAAATTTTCATAATCTTCAAACAGCAGCAAATTTTCATTTTTATATTCT
GAGGCCAAATGTCTGACTCTTTACTTCTGAAGTAGTAATTGACTTATGAA
CTGGTATGACTTAAACATAATTTTCCATAAGCTTCCGTATTTAAACCTAC
GTCTCAATGGGAAATCAACCAAATTAATTATTTTTGCAGGTACAGTTACG
ATTATGGCATGGTTCACATGGTGGTGTTTAGTACAGAACACGATTACCGC
CCAGGATCACAACAATATAAATGGTTGGAGAATGATTTGAAGAATGTTGA
TCGCAAGAAAACTCCTTTTGTGATCGTAAGCGGGCATCGACCAATGTATT
GTAGTGAATATGGTCCAGGTATGTAACTAAGCTGCACTGTTCGCCTACTC
GCTGTTTCGGGAATTTCTCAAAATGAAGCATTTCCCCAAATAGGTTGTAG
ATTAGTTGGATTGAAATTTAGATTGAGTAGGTGCATGATTCTTGGTAAAT
TAAGTATTATTCCTGTCTCTTTGCGTTAAAGAAAAACGCTGTCAGCAGTT
GCTTTATAATCTAGGATTCCATCTACATATTTAAGTATAGTTGAATTGCA
ACCCTTTCTCAAGGTATTAGCGAGTTTATGTGTGTGTTTTTGTACGGTGG
AGACGGTTAGCTTCCGATTTGACTAGATCCTGATCAACTGTGGACGACGG
TAAGCAAGCACTTATACCGTCCTCCATTTTGCGGGTTAGAAGTGCGGGTT
ATTCCGAATTGCTTCAGTCACTCCGCCGTCCTCTAAAGTGAAAATACTTA
AGTCGCTAGTAACCACAATTTTAGCGGATTCTTTATATCGTAAAGAATTC
TGATTACTTTTAAAACTATAATATGAACCATTCCGTTCTAGTTGATTACA
AAACTACTATCCACATGCAACAGTATGTAGAAGATCTCTTATACGAACAC
AAAGTAGATTTAGGTCTGTGGGCGCACTACCATTCATACGAGAGAACATG
CAAAGTCTACCGCAATGAATGCCGGGAAGATGGTATCTTACATTTGATGA
TTGGATCTGCAGGAAAACAATTGGACAGTGAGAAATGGTATAAGAAAGAA
TGGTCTGCATACCATGATCGTAACTATGGTTACGGAAGATTCTCTGTCAA
AAATTCAACTCATATTTTTTTCGAGTTTGTTCAAGATAGTATCGATAAAG
TCGTCGATTCTGTGTGGATCACCAAATGAATTAATCGAATATCGTCTTAG
GTGATAAATCGCGATTTTCCTGACTGATTACTATTTGCCAAGCCACATTC
ATGAGATAAAAGTTCGGATATTTTGATGAATAGTACCAACATCTTGGAGT
GGCCAAGCCATGAAATTTACTTAAAATGTTAAATTTTTCTCAAGATGGAC
GTTATTTTTTCACCATCAAAGCCTTTTCACCATTTTTTTACTTATACTTT
TTTTAATTTTGTACATTTTATGCATCATATTTTCGAAGTAAATATTTAAA
ACTCTTTTGCCACTGTCCTCGATTTCTTCAGCTTCTGTAAGAGGATTGGC
TAAATCATGATGGACCTCTTGGGAATTAAGAAAATACACTGCATCCATCA
TATTATTTACGTAAAGGTATTATTTAAAAGTAATTATTTAAGGTAAATGA
AAAATAATGTAACATGACTAACAAACAACAAATCAAAATGAAGGCCGCCG
CATGAATTTTGAGCTATACTTTATATTTCACATGTTTTGTTGTGGTTGTC
TCTTCGTTTATTTTTTATTTTCATACTTATAATTCTCTTTTTAGAGAAAC
TAAAAAAATGAACTAACAGAAACTAACAAATTTACACAATACATCAAAAT
GAATGCTGCTGCATGTTTGGTGGTATTTATTTTGAATTTTGTTGGATTAA
ATGGCAAAGGTTACCATCCTGTACCAACTTTTTTCAAGTAAGTGGAACTT
TTTTTCTTGACAAGGCAAGAGTTATACTTTGTTGAACAACATAATTTATT
ATCGGTCCTCAAATCCTTTGCTATAAACTATAAACCTTCCAAAACTTGGC
CTGCTTTTAGCGCATAGGCTATCTGCGTATAGTCTCTTTTCAATCCACAT
TCAGTGCCGAAATATTTGGCGCATAAGGGAAATTCCCTCAAAACTTTAAA
ACCGCAAGTGATTTTTAAGTGCTTTGAAGTACGCTTTGAAAGAAGAGTTT
TAACTCTGAGTTTTAACATTAGACTTACAACTTAGGAGGACCTAAGCCCT
CAGGATTTAAAAGCTCAAAAATGTTCAAATAAGGCTGATGATATAGCCTG
GAAGCCACTTAACCAAACAAAGTGGAATTACTAAAACTGCAATTCTCGCC
CGATCTTTAAATTCTGAAAAACGCTAAAACACCCAAAATTATGCCAATGT
ATTTCGGCGCTGATTGTAGATGTCTATACATTTAAGATCATTCAATAGAT
CTAAAATGAAAGTTATTGACATAATATATTGATCACATCTGACCATTACT
TGACCGGATTTCTTCTTCACAGTCGAAAATATCCAAATGGGTCGAACGTA
GATGCAAATCGCCCTGATTTTAAAATGGAAGGACCTTTCAACAATAATAT
TGACCTTGATAACATGAAAGCTTTGCTGAAAGTTTGGCCAGAAGAAGTCG
AAAATGCAGGACAAGTGACAGTTCTATGGGAGGGAATTCCCAATCCAACC
AAAACAGATAAAATTGGATATTATTGTCCTTATTATGACAACCCTACACA
TGGACTTGATTATATTGATGTCACAAAATCACCAACTTGGCAAGAAGGAT
ATGGTTATTATACAGTCAAGTTATACAACATGCGATCTCCTTGTGCATTC
AGATATTATATTGGTGGCAAAACTTTAGTTGCCATTAGTAACAAAGTGAG
GTTTACAAATGGCGACGCTTTTGCACCTCTTCAAGTTCACTTGGCAATGA
CTGGGAAAGAAACAGAGATGAGAGTTATGTGGAATTCTGCTAAAGGTATT
TATTGAACTTTTTTATTTTCAGGATTTGAACACGAACAAGTTTGGTGGTT
TGGGCTTTCCCATCTAATTCAATGACAAACGTGGCTTTCCACTCAAGCTA
ATTTTCTATTTATGAAAGGCAATAGTATCTCTCTGGTGCGGTTGTTAGAA
TTTTTTCTCGCTTTCTGAGAAGAAGAAAATAATGAAAAGTTAGTTTACCA
AATGCAGTTAAATAAATAAATGCTCAAGGAAATTCGAGCGAAATATCAAG
AAATTAAGAATTAACTTACAATTGCTACTCGGTGTTCTTCAGGCAATGCA
GTGTATTGTAAATTTCATTTAAAATAAAAATCTACAATACGCTGCATTGC
CTGAAGATTGAACCAGCATGAAGCACCATGTAGCTGTTGTAAGTTAGTTC
TTTATCTCTCGATATTTTACCAAATGAAAGAGTATGCAACATTGTCAAAT
GAGTAAATTATAAAAATGAAGCATAATAATGTTCACAGAAAATAATCACC
ACAGTCCGCTTTCACTTTCGATTACAACCCATCTATGTTTGATAGTTATT
GGTCATCTTGACATTTTCATTTTTCAGTTTCTGAAGGCATCCAAGTGCGT
TATGGTAAAACAAAAGACCTTGACAAAACACAAACGAAATATACATCCAA
AACATACAAAGGCTCGGAAATGTGTGAATCTCCTGCCAACACAACTGGAT
TTTGGGATGCTGGATATACTTATGATGTTTTGTTGACCGGTTTAGAACCA
AATACAAGATATTATTACTCTTGTGGTACCAAAGAGGTTAAAATAATACA
ATTACAAAGATGTACAAATTTTTCTTGTACCGGAACAAACTTACCAAATC
TTGGCTATTGATTGGCAGATTCTATACTTTTTTATAGCTTAGCTATAAAT
TTACTTGAGTTATAGCATAAGTAGTCATTATTCTTTGCCACGGAAAGTCA
TGTGATATGCTTTTCAACCAATAAGATTTAATTATTGCGAGGGGAAAACA
AACACTATGGTTTAACTCACTAAAAGATTTTGTTTAATGATTACACATAA
TTATCTTTAGTAAGTGTTCTGTTTTCCCCCAATTGTGACGTCATGCCGTG
GCAAAGAATAAAACCACTGGTCTGGAAGGATTTGTTTCTTTGATTGTTAA
TAGATAGAGCTTACGTACTAAAACCGATTTATTTTGCAAACTTTTTGATC
ATGTGATTGGAAAATGGACCAATCCCAAGAGGAGATTTTGGTAACGCGAT
CAAAAAGTATTGTTGTAACAAAAAATTAAACAAAGCTAAAACAATACATT
GCCGGACCGGGGTTTTTTATAATGACTATGGTTATAGATTGAAGTTTCGA
GTGATAAATTGTCTCCAATAAGTGAGGACTTTTAAGTTGAAGGGACAAGA
AAATATTACGATATCCGAGTTGTAGTTAATCAACTAAACTCATCCATCTG
GCTGCCAACTAACCAATTATTTGATACCTCATTTCAGTTCATGTCAGCGG
TAAACAACTTCACTACACCATTGAAATCAGGAGATAAAACACCCTTCAAC
TTTCTCGTCTACGGAGACCTGGGAACAAGTTCGAACGCTGTGCTGACCGC
AAAATATTCCCGAAATGAGATTAACGACCGTGACGTCAAATTCGTTTTTC
ATATTGGAGATATTTCGTATGCCAGAGGATATGTAAGAACTTAAATCGTA
GAAATTTTAGCGAGATTAATTTTAGCGTATATTAGCGAGTCAGGAAAATC
TTGATTTTTTTTGGATTTATTTTAGCGAATCAAGATTTCAAAAAATTTCG
CGTGGATAAATTTTAGCGAATACTCGTCTGACAAAATTTTCGCAAGGATT
AATTTTAGCGAGGGCAATGATTTTGAAGAAAAAAATAACGTTTTTTAATT
CAAAAATCAATATAGTCACATACTAGACAGTTCCCGTCGTCGTAAACGCC
GGTTAACGGTTTTTCTTGCACATCAAAAGCCTTTAAAATACTATAATGTG
GGTTAATTCCTGACATCGTTTTGGCTTAAAATGCCAAATACAATAATAAA
AATTATACTTCTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATGCCCCAAGGGTCCCAAAAAACTAAAAAACGTCAATTA
TTTCCACGGGAAAGTGGGTTTTTAAATTTGCGAAAGATTTGCACTGCAAC
GACTTCTTTAAGAAAACGCTAATTTTCACACTCTTCCCCTGACCACTTTC
GCTTTCGTTTTCAGCCACCCACCCACCCATCCAAACAGTCGGTCACGTAA
CTCTGGAACCCCCATCTCAAAAATCCATAATGGCCACCCCACGGCTCATA
GAGAATTAGACTTTTAGTATATAGAAGATATGTCTTTGTAACACAATTCT
TGACTTAGAACAGAAAAACTTGGAAATTTACGCCCCCATTACTAGTTTTT
GAAAAAGTTATGAAAATGATAACAAAATGAAAGAAAAAACATACTGGATT
TATTTTAGCGAATCAGCTTTTCGAAAAATTTCGCGCGGATAAATTTTAGC
GATCTGTCAATTCGGCGCGTTTTAGCGAGATTTATTTTAGCGAAAATAGC
GAAAACTCGCTAAAACGCTAAAATTAGTCTCGCTAAAATTTCTACGATTA
AAGTACTATCGCTTTTAGATTTTAGTTTAAATGCATCCGAAAGTTGTAAA
AATGAGATTAGTAATTTTTAATTTTTAAGAGAGAAATTGAGATATTAACC
TTCTGATCAACGGATCAGGCCCTATCCAGGACAGCAATCATACCCTAGGA
TAGGGAAATCACTGCGGTTACTTGACTCTAACAACTTGTGCTCGCGACAC
ATCGAGTTGCTGGTGTATAGTTAGTCACAGTGACAGTGCATTCTCGCATG
GTCGAACCTGACAAGTATAGCAACCACACCAAAAACACCGCAACCACACC
AGGCATTTTAAAAAACTTGACTGTTTTAAGGACTTTATTTTTAACAGGCA
TATCTTTGGGACCAATGGTTTGACCAGATCCAGCCTTATGCATCTTTGAT
CCCTTACATGGTTGGCATAGGAAACCACGAATATGATCATATAAATGGAC
ATGAAAAAGACCCTTCAAAACAACCCAACTTTCGTCCTTCATGGTTCGAT
GGTCACACTGACTCTGGTGGTGAATGTGCTGTCCCTATGGTCAATAGATT
TCACATGCCCGAGAATGGACTCGGTCTATTTTGGTAAGCTTCCATTAAAC
CACGTTTTTGAAACTTGGGCATGTTAATAAATTCAATAATCGCACCAGCC
GATCTCTTTAGTTGTTGTCAAGTTGAATACCAACTTCACTATCGCATCTG
TTCGCATTTTATTGTATGTGAAATCTTTAAAACCTACTAAAGGTGGTCTT
TGCTTCTCTACTTCAGTTCAAGAAACTAAAACCCGTATTGAGCAAGCTTT
TTTGATAAAAGTCTTGCACCTTTTCGTTAAAAATTCAGGTACAGCTACGA
CTATGGTATGGTACACATGATCATGTTAAGCTTCGAACATGACTTTCGCC
CAGGATCACCTCAATATATTTGGCTGGAGAAGGATTTGAAGAGTGTAGAC
CGAACGAAAACACCTTTTGTCATGGTTGGAGCACACCGGCCAATGTATTG
CAGTGAAGCAGTATATAGTAAGTCTCTAGTTTTTGGGTTAACTTTAGGGG
TGCAAACTTTCGCGAGCAGAAATTTTCGCGAATTTCGCGAATTTTAGCCC
TTTTTGCGAAAATAAATGTCTTTGAAAATAATCGGGCCATTCGCGAAATT
TTATGCTCACAAAGAATTCTTCACAACACAGAAAATCTGTAAAACTTCTA
ACATGGAATAAAATGTAAGATTAATGGCACTTTTTATCCTATTTAAAGCT
AAAAGTTATTTCTTTCTTTTGATTTGCGAAAGTTTATGCTCGCGTAAATA
ATTTTTTCGTCAAATTTGCGAAAATAAATGGTGTAAATTTCGCGATTTTT
CGACCTCGCGAAAGTTTGTATGCCTAAAGTACTGTCAATTTTAACCTACG
AAATAAACGCCATGATTTTGATTTTGATCCCGTGTATGGAAGCTAAAGCA
TCGTTATTTTTAGTTAAACTAAAGAATAAAATAAACTAATACCGTTAATT
GGGGTAAGATTCCACTTTCCAGGCTTAGATTCCACTGCAACTTTTCTAGC
GGAAAAAGACCAAGACTCCGGGTAGTTAAACTCACTCAACACAATGTTTC
CCATACCTTTAGAAAAAAGTCTTCCTAATCTTATGCCGACTATCCCAGGA
GAAATATTCCGGAAAAATTGGTGGAATATCAGTCCGGGAAACGGAATCTT
ACCGACGGTATTTTTTTCAATATGGTTCTTTTATTCTGATTTGATTTTGT
TCTATATTCAGTTGATTTTGTTATCGCACTTCGATTACAACAATATTTGG
AAGATTTACTGTACACATATAAAGTCGACGTTTGTCTGTGGGCACACTAC
CATTCTTACGAAAGAACATGCAAAGTGTACCGCAACGAGTGCCGAAAAGA
CGGTATTTTGCACTTGGTAGTCGGTGCAGGGGGTCAGTACCTAGATGTTG
ATAAATGGTATCCAAAGGAATGGTCTGTATACCATGATCATAATTACGGT
TATGGTAGATTTTCCGTCAAAAATTCAACGCATATTTTCTTCGAGTTTGT
TCAAGATAGTGTCGATAAAGTCGTCGATTCTGTGTGGATCACTAAATGAA
CGAATTAATTATTTAAAAAATTTATGTATGAAAAAAGTTATTTTTAAATT
TGAATCAGCCGATTGATGAATAATTCATTATCTTAAAGCAGTTTGTATGT
AAGATAAAATCTTATGCTAAGATTAAATTATGTAATTTTCTAGCTAATTT
ATCTCGAAGTTTTATTAACATTGTTCCTTTTTAAAAGGATTTTACATGTT
GTGTGCAGTGGACCTTTAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008471XLOC_008471Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015118-exon-sc0000204-1575043694:27781..27847TCONS_00015118-exon-sc0000204-1575043694:27781..27847Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1575043694:21953..22425TCONS_00015118-exon-sc0000204-1575043694:21953..22425Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1575043694:21162..21370TCONS_00015118-exon-sc0000204-1575043694:21162..21370Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1575043694:20266..20460TCONS_00015118-exon-sc0000204-1575043694:20266..20460Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1575043694:17715..17950TCONS_00015118-exon-sc0000204-1575043694:17715..17950Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1575043694:17281..17459TCONS_00015118-exon-sc0000204-1575043694:17281..17459Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1575043694:15977..16536TCONS_00015118-exon-sc0000204-1575043694:15977..16536Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1510915933:27781..27847TCONS_00015118-exon-sc0000204-1510915933:27781..27847Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1510915933:21953..22425TCONS_00015118-exon-sc0000204-1510915933:21953..22425Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1510915933:21162..21370TCONS_00015118-exon-sc0000204-1510915933:21162..21370Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1510915933:20266..20460TCONS_00015118-exon-sc0000204-1510915933:20266..20460Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1510915933:17715..17950TCONS_00015118-exon-sc0000204-1510915933:17715..17950Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1510915933:17281..17459TCONS_00015118-exon-sc0000204-1510915933:17281..17459Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1510915933:15977..16536TCONS_00015118-exon-sc0000204-1510915933:15977..16536Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1491911889:27781..27847TCONS_00015118-exon-sc0000204-1491911889:27781..27847Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1491911889:21953..22425TCONS_00015118-exon-sc0000204-1491911889:21953..22425Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1491911889:21162..21370TCONS_00015118-exon-sc0000204-1491911889:21162..21370Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1491911889:20266..20460TCONS_00015118-exon-sc0000204-1491911889:20266..20460Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1491911889:17715..17950TCONS_00015118-exon-sc0000204-1491911889:17715..17950Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1491911889:17281..17459TCONS_00015118-exon-sc0000204-1491911889:17281..17459Clytia hemisphaericaexon
TCONS_00015118-exon-sc0000204-1491911889:15977..16536TCONS_00015118-exon-sc0000204-1491911889:15977..16536Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000204supercontigsc0000204:15977..27847 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.9855	13.8828	12.1323	9.67902	101.639	76.0456	39.7985	36.6618	10.2688	3.78069	0.000916748	10.0224	8.76169	2.97999	0.0541944	6.70497	12.5075	8.17078	11.5935	23.4383	13.7197	12.7174	24.926	16.9749	75.6071	60.5514	11.8533	43.1238	11.9281	16.8092
Blast
[Close]
BLAST of TCONS_00015118 vs. Swiss-Prot (Human)
Match: ACP7 (Acid phosphatase type 7 OS=Homo sapiens GN=ACP7 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 2.509e-32
Identity = 109/352 (30.97%), Postives = 152/352 (43.18%), Query Frame = 3 
Query:  678 YTYDVLLTGLEPNTRYYYSCGTKEFMSAVNNFTTPLKSGDKTPFNFLVYGDLGTSSNAVLTAKYSRNEINDRDVKFVFHIGDISYA--RGYAYLWDQWFDQIQPYASLIPYMVGIGNHEYDHINGHEKDPSKQPNFRPSWFDGHTDSGGECAVPMVNRFHMPENGLGLFWYSYDYGMVHMIMLSFEHDF------RPGSPQYIWLEKDLKSVD--RTKTPFVMVGAHRPMYCSEAVYIDFV-------IALRLQQY-LEDLLYTYKVDVCLWAHYHSYERTCKVYR----NECRK------DGILHLVVGAGG--QYLDVDKWYPKEWSVYHDHNYGYGRFSVKNSTHIFFE 1643
            Y + V L  L P  +Y Y CG+ +  S    F   LK+G        V+GDLG  +   +     R +        V H+GD +Y   +  A + D++   I+P A+ +PYM   GNHE  +   + K                             RF MP +  GL WYS+D G  H+I  S E  F           Q+ WLE DL+  +  R   P+++   HRPMYCS A   D           L+ + Y LEDL Y Y VD+ LWAH HSYER   +Y     N  R+       G +H++ G+ G  + L     +P+ WS      YGY R  + N THI  +
Sbjct:   92 YIHRVTLRKLLPGVQYVYRCGSAQGWSRRFRFRA-LKNGAHWSPRLAVFGDLGADNPKAVPRL--RRDTQQGMYDAVLHVGDFAYNLDQDNARVGDRFMRLIEPVAASLPYMTCPGNHEERYNFSNYK----------------------------ARFSMPGDNEGL-WYSWDLGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSNADLDDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVFNGSREMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSAVRVKEYGYTRLHILNGTHIHIQ 411
The following BLAST results are available for this feature:
BLAST of TCONS_00015118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACP72.509e-3230.97Acid phosphatase type 7 OS=Homo sapiens GN=ACP7 PE... [more]
back to top