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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015381 ID=TCONS_00015381|Name=TCONS_00015381|organism=Clytia hemisphaerica|type=transcript|length=1545bp
CTATTTTATTACTATTGAGATAAAAACAATATTAAGGATATGGAAAACTG
TGGAAGTTTATCTCCCTAGTATTCTTGAAGTGAGAGAcacattttaattt
tcaaactaatTACCCAGTAAGCTTTGCGTTCACGTTTGGTTTTTATGCTC
TGTGTTGCTCTAGATTGAAAGAGATGGTTGAAAGTGTCGTCCAGAGTCCA
GTTCGCCATCGAAAAAACGTGCATTTGAGGAAGCCGCAGAAGAAAAAACC
CCTCTTCAATTAGATAATGTTTATCTAAGCCCAAGTAAGTTGAAGAAATA
CAATGATGTCATCAAATTTGGAAGCCcttcaaaagaaacaaagacGGCTG
TAGAATTTCCGTATCTGCCAGTTCCTGAACCAAAAGGTCACGGTCAGCCA
GATGCACCCATACATAATCAATATTAGCGACATCACCCTTATCTGTGACA
TTGTATCAATTAAGGCATTCATTAATATTGATAACCGTCCAGTTGTAAGT
GTGCAGCTTCCTTACATTACAAGAGTGATCCTGTCAACAAAAAAGATTGT
TGGGCTAATGACTCAACTGGTGCGCTGCAATGCCATTGGCTCTTTGGGGT
GATTTAGTAAATCAAGTGGAGAATAGTGGAACCTATCGTGTTATCAACGC
TTAAGTGAAGGCTGGGTATGGCAAGTTGTCTCTAACCACTAATTCTTCAA
CCAAAATTTACAATGATGACACTGCTGTAGCCCCATCCCCATTACCAACT
AATCAGAAAACATCAGCTGTCAAGTATCCACCCATCAGAGTGATCAATTT
GCAACGCAGGTATTACTGTACTTCATGTAATAAATTCAAAGATCCTACAT
CACCAAATCCAAACTTATTTTCTTGCTGCTCATCATGTAAATCTAATATC
TCAACCGTAcgcatgaaaaagaaaattagtaCTCTATTAGAATTTGAGGA
TGATCGCGAATCAGTCAAAGTTAGGTTTGGAGGAAGCCAGGTGGAGGAAT
ACTTTAAAAGATTTGGCTCTGCCGTGCCCCGTGATGTTGATGACATCAGT
ATTGCCCTACTGCAGGACTGTAACTCGATCATGCTTTATGATGCACAAAA
TTATTGTATTGGGTTTAAGTAAACTTACTCCCTTGCTGTGAGACTTTAAA
TTTATAGAACTGTCATTGATGACTTTNACCTTCAGTGAGCTTGTGTGTCT
CTCATCATTGAAAAAACGTGCATTTGAGAAAGctgcagaaaaaaaaacat
tgttgttttttgttctcttttgatatttgttgttttttctattttgttct
GCCCTATATTTCAGCTATCCTGTGGCACTGTTTTGGCCAATCTTACTTGC
CAGCTTTGAGAATAGACCAGTATTTAGCTTCCTTGACTTGCCTTTATCAA
TCATATACTTTGCTTCTGCTGTTCTTTATAATTTGTATTTTCATATTCTA
ACCGTATATagattttaatatattttcatGGATACTACTTCATATTTTAA
ACTGTATAATAACTTAAAAAAGAAACTCTTCAGTTTTTCCTGCTC Run BLAST on NCBI transcript from alignment at sc0000210:295617..297161 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015381 ID=TCONS_00015381|Name=TCONS_00015381|organism=Clytia hemisphaerica|type=transcript|length=1545bp|location=Sequence derived from alignment at sc0000210:295617..297161 (Clytia hemisphaerica)
GAGCAGGAAAAACTGAAGAGTTTCTTTTTTAAGTTATTATACAGTTTAAA
ATATGAAGTAGTATCCatgaaaatatattaaaatctATATACGGTTAGAA
TATGAAAATACAAATTATAAAGAACAGCAGAAGCAAAGTATATGATTGAT
AAAGGCAAGTCAAGGAAGCTAAATACTGGTCTATTCTCAAAGCTGGCAAG
TAAGATTGGCCAAAACAGTGCCACAGGATAGCTGAAATATAGGGCagaac
aaaatagaaaaaacaacaaatatcaaaagagaacaaaaaacaacaatgtt
tttttttctgcagCTTTCTCAAATGCACGTTTTTTCAATGATGAGAGACA
CACAAGCTCACTGAAGGTNAAAGTCATCAATGACAGTTCTATAAATTTAA
AGTCTCACAGCAAGGGAGTAAGTTTACTTAAACCCAATACAATAATTTTG
TGCATCATAAAGCATGATCGAGTTACAGTCCTGCAGTAGGGCAATACTGA
TGTCATCAACATCACGGGGCACGGCAGAGCCAAATCTTTTAAAGTATTCC
TCCACCTGGCTTCCTCCAAACCTAACTTTGACTGATTCGCGATCATCCTC
AAATTCTAATAGAGtactaattttctttttcatgcgTACGGTTGAGATAT
TAGATTTACATGATGAGCAGCAAGAAAATAAGTTTGGATTTGGTGATGTA
GGATCTTTGAATTTATTACATGAAGTACAGTAATACCTGCGTTGCAAATT
GATCACTCTGATGGGTGGATACTTGACAGCTGATGTTTTCTGATTAGTTG
GTAATGGGGATGGGGCTACAGCAGTGTCATCATTGTAAATTTTGGTTGAA
GAATTAGTGGTTAGAGACAACTTGCCATACCCAGCCTTCACTTAAGCGTT
GATAACACGATAGGTTCCACTATTCTCCACTTGATTTACTAAATCACCCC
AAAGAGCCAATGGCATTGCAGCGCACCAGTTGAGTCATTAGCCCAACAAT
CTTTTTTGTTGACAGGATCACTCTTGTAATGTAAGGAAGCTGCACACTTA
CAACTGGACGGTTATCAATATTAATGAATGCCTTAATTGATACAATGTCA
CAGATAAGGGTGATGTCGCTAATATTGATTATGTATGGGTGCATCTGGCT
GACCGTGACCTTTTGGTTCAGGAACTGGCAGATACGGAAATTCTACAGCC
gtctttgtttcttttgaagGGCTTCCAAATTTGATGACATCATTGTATTT
CTTCAACTTACTTGGGCTTAGATAAACATTATCTAATTGAAGAGGGGTTT
TTTCTTCTGCGGCTTCCTCAAATGCACGTTTTTTCGATGGCGAACTGGAC
TCTGGACGACACTTTCAACCATCTCTTTCAATCTAGAGCAACACAGAGCA
TAAAAACCAAACGTGAACGCAAAGCTTACTGGGTAattagtttgaaaatt
aaaatgtgTCTCTCACTTCAAGAATACTAGGGAGATAAACTTCCACAGTT
TTCCATATCCTTAATATTGTTTTTATCTCAATAGTAATAAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015381-exon-sc0000210-1491911889:295617..297161 | TCONS_00015381-exon-sc0000210-1491911889:295617..297161 | Clytia hemisphaerica | exon |
| TCONS_00015381-exon-sc0000210-1510915933:295617..297161 | TCONS_00015381-exon-sc0000210-1510915933:295617..297161 | Clytia hemisphaerica | exon |
| TCONS_00015381-exon-sc0000210-1575043694:295617..297161 | TCONS_00015381-exon-sc0000210-1575043694:295617..297161 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210 | supercontig | sc0000210:295617..297161 . |
Blast
The following BLAST results are available for this feature:
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