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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015474 ID=TCONS_00015474|Name=TCONS_00015474|organism=Clytia hemisphaerica|type=transcript|length=3176bp GAAAAGGTCCATATGACTGTGATTGTAATGGGAATCCATTTTGGTGCCAG CGAGGAGCCAGCGATGATGTACAACATGCTTCAATGATTAAGAATGaaaa aaaattataaaaaaccaTGGAAGGCATTGGAGCCAAAGGATTGAGAACAA AGTTAATTGTAAATTATTTACCACAGTCTATGACTGATCTTGAATTCAAG AGCTTGTTTGCAACTATTGGTCCTGTAGAGAGTTATAAAATATTAAGAGA TACAGCCACTAATTACAGTTTTGGGTATGGCTTCATTGATTTTCAAAAGC CAGAGAGTGCTGACAGGGCCATTGCTGATTTAAACGGACATAAAATTGCC AACAAAACTCTACGAGTAGCTTTTTCAAAACCTCAAGGAGCCAGTAAAAA TATCAATCTTTTTGTTCAAGGTCTTGGCCATCGAACAGATGAAGAAATAC TTCAAAATTTGTTCAGTCCTTATGGAGAAATTGTTAATGTTAAAGTTGTT AGGGATGCTGGTAATAATTCAAGAGggtttggttttgttttattCAAAGA TAAGTCTCAAGCAGACGCAGCTATCAGAGCATTGCAAGGTCACTGTGATG GGTATGGTATGGACCTGCAGATAAAATATGCCAAAGAATCTTCAGAGCAA CAGAGAACCCATCAAAGGTACAAAGAGTTTGTAAGATCAAGTTACCAACC AGTCCAACCTGTCACAGTGAATTATAATGGGGATTATGCAACAGTTGTCC CTGTCGGTAATGCTCATCAAATCAGTTATCCAACAAACTCTTATGGTGGA GGGTATTCACCAGTTGAATACCAAAAACCTCCAAGAGGTAGAGGTATGGT TGCCACAAGGTTCAATCCTATTGCGAGGCCTGTTTCAAATCCTGGTCATA ATGCAGGAATGTCAATGGGAATGGGAGGAGGCCTTAATGAAGGTGCTCCG AATGTTGTTTTCGCATACAACATAGGTCCAAATGCCACTGAGGGAGACAT GTATGcacttttctcaaaatatggTCGGATCAATAAGGTCGATGTTGTCG CAGGGAAAGGTTATGGTTTTGTGCACATGCCTGTTTTTCATGAAGCAAAC GAAGCAGTGAGGGCGTTGAATGGTGCATTTTATAACGGAAAAAGTCTCCA AGTGTCAATTAAAAGGCGTTGATCATTAGGATTTTAGTGGCTTCTACAGA GTGTGGCTCATCTCAAGTGCATAAAAATGCTTTCCTTTTTTGAGTCATTT GTTGTACTTTGGCTTAATTAAGATTATTTAAAATGGCTAGAACTATACAT TTTGTGTCATGGCTTACCGGACGTTTATTGAAGAGCTTCAAATTGGTGAT TGTTGCATCCGTCATTTTAATGTCGTTAATTCTTCTTATGATGAAGGACG CTGATCCTCCCCCTGGTGAAATCAAAGCTACAAAACTCTCCAAGTTGTCA TTTGGTGAGGGAACACAAAAGATGCTAAAAAAACTTCATCCTTTGAAAAC AAGAGGTGTTAAAACATCTGAAAGTGTACGGCAGGATGAAAGGCCTCCTT TACCAAAACAtcctttgaaaattgaaaatgttcaaattgAAACTGAGAAA AAAGTTCAGCCAACACAGGTTCTCAAGGAACCTATAGCTGACAAACAAAT GGATCTGAAGGAACCTAAGGAGAAGCCTTGTTATCACATACATACTTTCT ACTACCCATGGTATGGTAACCCCAAGTTTGATAAAGAATACATACATTGG AACCACCAGCTGTTACCACACTGGAACCCACAGGTGGCAAAGCATTATCC AAAAGGTGTACACCAGCCACCCGATGATATCGGTAGTGATTTCTTCCCTA AGTTAGGAGCGTACAGTTCACGTGATCCGCATGTTATTCTTAGCCATATG CAACAACTATCTTCTGCAAACATTGGTGTTGTCATTGTGTCTTATTATCC ACCCACTCAAGGTGATGACAATGGAAAAGACTGGCAAAATGTTTTCCCAA TCTTGTTAAAGACTGCCAATGATTATGGAATCAAGGTTGGCTTCCATATT GAGCCGTATAAGAATCGAAATCAAAACACAGTGAAGGATGATCTTATACA TATTATTGATACCTATTCACATTATCCAGCGTTTTTCAGGTATGACTATA ACGGTAAATCTCTTCCCATGATTTATATTTACGATTCTTACCACACTAAA CCTGACGAATGGAGTCAAGTTCTTTGGCCCAATGGGAAAAACTCTGTCCG AGGTACCAAGTATGATGCTTTTGTCATCGGTTTATGTGTTAAGGAGAGTG ACTTGCGAGAATTGAGACGTGGAGGATTCGATGGTTTTTATACATATTTC GCAGCAAACGGTTTCACCTATGGATCATCCAGAAGAAACTGGCAAAATTT GCATGATTTTGCGAAGCGATTTAACATGATTTTTATCCCCAGTGTTGGTC CTGGGTACGTGGACACCAGAATCAGACCGTGGAACGGTGAAAACACAAGG AACCGTTTGAAAGGTACTTATTACAAAGACTCGTGGAAAACTGCTTTGAA GTTTCAGCCAAGAGTCATTTCGATCACTTCTTTCAACGAATGGCACGAGG GAACACAAATTGAGAGGGCCATACCTCACATGACAGGTGATTACCACTAT AAAGACTATGAACCACATTCTTCTGACTATTATCTGGAATTGACCAAAAA ATTCGCCAAGGAGTTCAAACAATGTGCAAATCCAGATTCGGGATTGAGAT TTTAATTTGTCATTGTTTACTTCATCGGTATAGTTTGAAGTCTGATCTTT GAAGAAAGCTCAAATAAGTCcttcaaagttttttgattttttttcctacA GAAAGATCCGATACGGATATTGTATAAGATTCAAATTCTAAATTTCTCAC CCTAATATAGAAATTTTTGGAAGCCCTACTTTTTTTCAAActccccgttt atttggaacctaaaatACTAGTATTGTATGTACGAAAACCTCACCAATTC TGCCCTGaatcttatttctcatttcataTATCTCATAATTAATTCTCGTT CAGTTTTATAGAAAGTTTGTatatttaatgcattttatttATTCTATATA CGCGTTGtgaagttttattttgtttttaactaaTTAATAGAgcatatttt ttgaagaaagggTTAAAGTATAACAG Run BLAST on NCBI protein sequence of TCONS_00015474-protein >TCONS_00015474-protein ID=TCONS_00015474-protein|Name=TCONS_00015474-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MARTIHFVSWLTGRLLKSFKLVIVASVILMSLILLMMKDADPPPGEIKAT KLSKLSFGEGTQKMLKKLHPLKTRGVKTSESVRQDERPPLPKHPLKIENV QIETEKKVQPTQVLKEPIADKQMDLKEPKEKPCYHIHTFYYPWYGNPKFD KEYIHWNHQLLPHWNPQVAKHYPKGVHQPPDDIGSDFFPKLGAYSSRDPH VILSHMQQLSSANIGVVIVSYYPPTQGDDNGKDWQNVFPILLKTANDYGI KVGFHIEPYKNRNQNTVKDDLIHIIDTYSHYPAFFRYDYNGKSLPMIYIY DSYHTKPDEWSQVLWPNGKNSVRGTKYDAFVIGLCVKESDLRELRRGGFD GFYTYFAANGFTYGSSRRNWQNLHDFAKRFNMIFIPSVGPGYVDTRIRPW NGENTRNRLKGTYYKDSWKTALKFQPRVISITSFNEWHEGTQIERAIPHM TGDYHYKDYEPHSSDYYLELTKKFAKEFKQCANPDSGLRF Run BLAST on NCBI transcript from alignment at sc0000211:284920..297105- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015474 ID=TCONS_00015474|Name=TCONS_00015474|organism=Clytia hemisphaerica|type=transcript|length=12186bp|location=Sequence derived from alignment at sc0000211:284920..297105- (Clytia hemisphaerica) GAAAAGGTCCATATGACTGTGATTGTAATGGGAATCCATTTTGGTGCCAG
CGAGGAGCCAGCGATGATGTACAACATGCTTCAATGATTAAGAATGGTAG
GTATATCTTTTTATGGCTGGGGACTTCAATTCCATTGTATTGTATTCAAG
CCAGACAATTCAGTGGGGATGGAAGAAATATATTTACAAAGCACAATATT
TAGCACGCCGAGTCCATTATCTTTTCTCACATGCCCAATATTTTTCATAT
TGATTGGTAAGTAAGTAAGTAAGTAAGTATTTATTTACCATTTAACACTA
CAAAAAAAGATACAAGTGATGTAATGCACAAAAAAATATATGGAGGGAGA
CCGCCTTATAGTCTAGCTAATCAAAAAGATGCGGCCACCTTGGATGAGAC
TGTGTCCAAATAAATGGTTTATTATCCGTTCATTGCTAAAGTATTTCTCG
TTTTCAAACATAATTCCAATTTATAAGCTCATAAATCTGGTTTCTTGGTA
GTTTTTTATTCAAAAGTCTTTTTTATTTTGTGACGTAACGTCAAAAAGAA
GATGGTCAATTCCAACAATTGTCATGAACTCGTTGTATGACGTCAATTTT
TGCCTCCATGGAAGCTAAATATTCTAAAATATTGGACAGCAAATGCCGCT
ATTTATGCGCGTCGGATAATAATCTGCAATAATTTGCATTGAGGATTTGC
TTTATAAAAAGGGACTAATGTTTTTATGATTATTTTTTTCCATACTGTAT
ATCTGTTTTTTTTTCAGTGGGGACAAAGATTAGGGTGTAATAGTCCGGAG
GGGGTACTAGGGTTGCGAGCCCACAGGGGTGGCGCCCAACTTTTGACCCT
TCGACCCTTACCGGGACTAAAAAGGAGAAAACAAAGGAAAATTTTGTGGA
TTTTACAACCCTTATCGAGAAAAATTTGACCAATATCGATCTTTCCAGGG
GTAAAAAAAGTTGAAATTTTCCTATTTTTCCAACCCTTAGTGGGACATTC
CATTTGCCTATGCCCCCCGGTATTAGAGGGTATAATTTTCCACTGGGTAC
GATATTTTTGCCAATTTTTCCACTGGAAAGGAGTTCCAGTGGGTCGTCTG
TGCGATGGGGCGGGTGCTAGGATATTCTTTAAAATAGTAGGATGAATTTA
ATGCTATCATGGGGGGGTTTGTACGTTTACGGTGTGACGGGATTGGCCCT
TTTTTAGTACGGTATTATTACGGGATTTGACGAAAAAAGAGACGAGAAAA
CGGTATTTTAAAATCAGGCAGTGACGGTATTCAGGTACACTTTTGCCCTG
TACAAGCCGGTGTGACGGTGTTATTATTTTTTCAATTTTCGGGATTACAG
GATTCAGCAAAAATTTTGACGGGAAAACGGTATTTCGAATCCCTTCAAAC
CCCCCCCCTATCATGACAGCGTAACTTAGATATTTTATACTCTACTGTAA
TCAGTATATATAGACTTAAACTTGTATATCAAGATTACGAGATTTCGAGT
ATGGGCCGATTTTACTTAGTTTTCAGTGGTTTCATTTTCAATTTCAAGCC
AATATCTTAGCAACCGAGAGCTCGTCCATAGTTACAGGGAATTGAGCAAA
AAAACAAACATAGGAAGTTTTCCAAATCCCCTACAGTATTTCAATTAAAA
CCAATAAAAAATGAAACTTTTCCATGTTTCTCTTTTTTCCACCAATTCTT
CAAAATGAAAATGTTTAAGATTTAAAGTTCTTCTTTTATTCAATGATTTT
TTACGGCACTTTGTTGACAATCTAACTCTCCCATCAAATTCCCGCTTTCT
TCAGTAAATTGAAGATGAGAAAAAACCTAAGCCTTAGAATCACAGATTGA
AAAAAAATTATGAAGGGTGGGATTTTACAGCCGCCTGTCGTGCAAGGCAC
TGAGAGGCCACAGGTGCCAAAAAGAAGGGCCATTTGAATGCAGCAATCTC
ATTGGTGGAAATTTTATAAACGGCTGCACTGCAAAGGAGCGCCAGGAAGC
AATCAGTAGAAGAGACCACTTTCGTTTTTGTTGCAGATTTCGATATAAAC
TTCTCTCAGTCAGGGATTACTTGTCAATGTGTTGTGTCAACTTGTCAACA
TTGTATTGAAAGATAAAAGAGGTAAGACTAGCCTAGTTTCTAATCCTGAT
ATGGGAGTTTAAGTTTAGACTGCTAATTTGGTTAGCTACAAAGCGAAATC
ACATTCATTTTTGATTGAGGATGATTTTTTTGTGTCAATCTTTGGTAAAA
TCATCATTAGTTGTCAAAATTTTGCCTAATAATCATATTAAAAAATATTC
CATTTTTTGAAATATGGGAAAGACAAAATTTCCTTATTTTAATTCATATG
AAATAATGTGTCTGGTATGAAACGGGAGCACTTATGTAAAAATAAATCTC
TTTAAATAGTGATTGGAAAATAGTTTTATTTTATTTTTGGCGTGTGGAAA
ACAGTGCTTTTTAATGATTTTCGAAACTTTTAAACTTTATTTATTTTTGC
CTCACTACACCAGAAAAAATTCTCAGACCAGAAAAATTGTACTCAAGAAA
AATGTTACTCAAGAAAAATGTTGACATAATTTTTCTCAAAAATGTTTACA
GATCACATGGGTTTTATTTTTGTTCTTGAAATTAGGTAACTTTGTCTACC
GTTTTTCTCAACATTTCTCGCAACTCTTGAATAATTGAGGCAAATACAGT
ATCCCACTTTTTGAGTTTATAACACCTTCTTTTAGGGCCTGTAGAGCCAG
ATTGAAACAATTTGATCAACATTTGATCTTTGTTAGTAGGTTAACACCTT
TCGACAAAAATAAAATTCCTAAAATGCTCAAAAGCTGAGTAATAATGGAG
GCTTAAATTTGTCAAAAAATGAGTTTTGTGCCATATCTAACCCTCCATTA
TGGAAAGTGAGATCAAGGTCACATAGGTTTTTTTGGATTTTTTTACTGTG
AGTACTTTCAGAAAATCAAAAAACCCATATCGTCGCATGAGAAATAAAGA
GACTTGTCTCCAATTTTTCAAAAAATGAGACAATGATTGATCCATATTCT
TCAGAAAATATTCTTGGAGATAAACGGACCTAAATCCATGAGGTTTGACT
TTTTGGCCTTAAATTTGGATACTATCTCTATTTTTTTAAATGGATTGCAG
ATTTGAACAAATTGTATAAAAGACAACCCTAAATCCAAAGTAAAAAAACT
TAAATCCATTTTTTATATGTAAAGTAATAGGTAACAAAATTCACAATTTT
GAGAAGTAAAAAGATTTGTCTCCATTTTCTGGCGATAACTCTTTTTATTT
CTAAATTTTTAAATGCTAATATCTCAACACATGGAAAATGGAGACAAGTC
TCTTCATTTCTCATGTAACGATATGACCTTAGTTGCAACTTGAAATATTT
TCTCTCAAAGCCAAGACTTTTACACTTGACAAAAATACTTCAACCAGCCC
TCAAGCTGCCGTTATGGATTTTTGGGATCGAAAATTTTAGTGTTTTTTAT
TATTGTCTGCTAAATATCCAAAAGTAAATGCAAACTAAATTTCATACTAC
CAAAATTGTCCAAAACTGCCTGGTTCTTAGAGCTTAGGATGTTTTGAAAA
AGGTATGAATCTAACATTCCTTTTACGAATTAGGCTGGGCTTAAAAAATT
GTTGGTTTGCTGTCACCCGACCCTAGATTTTAGAGGTGGGTCGGTCGGTC
GGAATTTTTTTTTATTTTGGCGATTTATGAAATTTTTGTCCGTGGAAGGG
TTAACAGTTTGTTTACATTTAGGTAATTTTGAATAAAAAACAGAAGTGCT
AGCAGGGAATTTACGATTCTTATGCTTGCAAGATACGAGTTTTGATTTTT
TATTGTTTGAAGTTTTTGAAGGAAAAAAATCTTTAAAATGGCAATAAAAT
TTTTTGGGTCGGCAGGTTTCGAGGTAGGGTCGGTCAAGTGACGGCAAACC
AACAATTTTTTAAGTCCAGCCTTATGCCTTGAAAATATCTAGATCAGTTT
GTTACAAATACAAGCTATGTGAAAACTCTATTTTCATTTCTATTTGGTTG
ACTTGCAGGAGGCTTTGAGGGCTATTTTCGCAATCATAGACGCTTTCAAT
GAACGCCCCATTAGCACCTTGGACTGACTACCCAATTCCCCTCACATGGC
ATGGGTTGACCCGGGCGAAGGTTTAAAGACATAAAGCTACTTACTGTAAA
TGGCTAAAATTAATCGCAAAAAACCTTATAGAGAGGAATTGTAACTTATG
ATAAGCTAGGTAAGAAAAATATGAAATAAAAGACAAGGGCTTCCAGAAAC
TTTCTTTTTTTCGTTAATTAGAGCCTTTAGATACATCTGCATTGAAATTG
GTGGGTTGAGTTTCCCTTTAAATGTTTTGTAGGCTCAGAATTGTGATTGA
CATTTTCATGTTCAGCCCATTTTATGGCAATACTTCTCTTTGTTTCACTG
TTATAATTTTGTTCGCATGAATATACTCCCACATAAATTTGGCATGTAAC
GTGGGGATTCTTTCGAAATTTAACTTTCTCAGGTCTCCAAACAATAAAAC
AAACTAGCCGGTACCCGGCGTCGCACGCCGGTTAAGCTGTAGCTGAACGC
ACTAAAAGTCCTTTGGATGTTGAAGCTGGCTTAAAAAAAGCGATCAAATA
AAAAAAAGAAATCTGTACAACGTTTAACTCTAACCTTCCCCGGGTGTCTT
ATCTTTTAACCATATTTGGATCGTTTACTGCCCTCCCGAGACATAAAGCC
CTAGCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGGTAG
TTATTTTTCTCGCTTCGCTCGCGTTAAATATGCCGTCCAGTTTAAATGAC
AATTTTTCAGGAAAAAGTGGGAAGGTCACAAAGAATAGTGCAACCATTTG
TTTTTTATCAGATCAAAGAAAAAATAAGACAATTTAAAGTTGCTTTTTTA
AAGGGGGGGTTTCACGTTTGACGGAGGAGCGGAATCGGCCCTTTTTTCGG
ACAGAGTGGCGGAATTTGGCGAAAATTTAGACGGAATTACGGAAATTGGG
TTCTCTGACGGAGACGGAAAATCAGACAATTTTAGTGCGGAAAAACGGAA
TTTAGCAAAAAAAATTGCGGAATTTCGAAATTGTTAAAAGATATTCCAAA
TTTGTGGAATTTTCAACAAAAATATTGAATTTCAAAGGAATTTTCGGTGA
CGGAATTTTGGTTCAATTTAAGACGGTTTGACGGAAATTGGAGAAAAAAT
TGGCGGAATTGCGGAATCAGGTACCCCCTGAAACCCCCCCCCCTTTTAAA
CCCTTGGCATAATTTTTCGAATTTGAACATATAGTAGAGGGAATTTTGTA
AAATCGCTTGACTGTTTTGTTAGAAGCACTTGTTATACATTTTTGGAAAG
CTAAGGGGTAGGGGAATCGAAATTACTATGTTTCCAATTTTTTTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATA
ACAAGTGCTTCTAACAAAACAGTCAAGCGATTCCAAAAAATCGAACAAAA
TTCCCCCTACTAATAAAAAATGACAGACTAAACGAAGACTTGAATATTTT
TATAAGAAGAAAGAGGTAAACTAATTTTTTCTTATGCTTGATATCGCCCT
TTGAATGCTGGTTGTTGTCCACAAACTTTTTGATTTTAATGTTTTGATTT
ACTTTTGAAATGTTCTTTTCTATGAAATGAAATTGTTTTGTTTTGAAAAG
AATTCGAATGTCATTTATACGATCGTTAAATACATTCGAAAACATTTAAA
ACAAAAGAAGAGAGAAAAAGACAACTCTGGGCAGAAATTAAAATTACTAA
AAATGTAGATGGGCCTTAAATTTCAAAACAAAGGCTGAATAAAGTCTAAA
CAAAGCTCTATCCGATCTTTTACAAATGGCGCGAATCCAATGGAACAAAT
TTGTGGAGCAAGAGACTAAAAGTCATAATTTTAAAACACAAACAAAGCGA
AAACGAAAGTGGTGACACACAGACACACAAAGCACCGCTATTAATATATA
GATAAAAATTTAATAATAATTATTATTGAGTTGATGGAATCTTTGAGGAA
CTTTTTTGGGGCATTTTTGTTGTTTTCACAGAATGGAATCCAATTTTGAT
TGTCTTTCAGGTCAATATCAGATTTTGGATTTCTTGGGTTGTTTTTCTTG
TCAGAAAATTGTGTAAAAATAAACAGTCGAAAAGTCGAACAGTCGAAATA
TTTTTTTTAAACGTGCACCTGTGTTTTTTGCTAGTGTTCATAGAAAAATC
CAAGTATTTTGGAATGTTGACATGAATATTTCTTTATTTTTTATTTTTTT
AACTTTATTCTTTACTCTACCTTTTGCTTTTCAGAAAAAAAATTATAAAA
AACCATGGAAGGCATTGGAGCCAAAGGATTGAGAACAAAGTTAATTGTAA
ATTATTTACCACAGTCTATGACTGATCTTGAATTCAAGAGCTTGTTTGCA
ACTATTGGTCCTGTAGAGAGTTATAAAATATTAAGAGATACAGCCACTAA
TTACAGTTTTGGGTATGGCTTCATTGATTTTCAAAAGCCAGAGAGTGCTG
ACAGGGCCATTGCTGATTTAAACGGACATAAAATTGCCAACAAAACTCTA
CGAGTAGCTTTTTCAAAACCTCAAGGAGCCAGTAAAAATATCAATCTTTT
TGTTCAAGGTCTTGGCCATCGAACAGATGAAGAAATACTTCAAAATTTGT
TCAGTCCTTATGGAGAAATTGTTAATGTTAAAGTTGTTAGGGATGCTGGT
AATAATTCAAGAGGGTTTGGTTTTGTTTTATTCAAAGATAAGTCTCAAGC
AGACGCAGCTATCAGAGCATTGCAAGGTCACTGTGATGGGTATGGTATGG
ACCTGCAGGTAACTTTATATCATTTGAGGCATTGTTTAGATTGTACTTTG
TTTTTCTTTATCTTTTATTAAAATTGACCATATATATGTAAGTATACATG
CAAAAATGATTATGCTAATTTTCCCAATAGGGAATTTTAAAAGTGTTTAA
AAAATTAATATTTTTTAGATATTTATCGATTTCGTCCTGCTACTATCTCC
TTTTCCTGTTGGCCAACAGCTGTTTTTTCATCAACAGTAAATTTATTTTA
AAAAGACATAAAATCAGAAACTTTACTCACTTTTATTCCACATGTTAAGT
AGATCATACAACCAACAAACATAGTTAAAAAGAGTGCTAAAATAAGATAC
ATACCACTTTATATTAATTACTATTTTGAACACCTTTTATTTTTGTGCAT
GTTTTCTGTGCAGAAAATTATTGAGGGATTAAGGTAAAAGTATTTGTTGT
TAAAAGTTCTTTGTTTCCTTTATAGATAAAATATGCCAAAGAATCTTCAG
AGCAACAGAGAACCCATCAAAGGTACAAAGAGTTTGTAAGATCAAGTTAC
CAACCAGTCCAACCTGTCACAGTGAATTATAATGGGGATTATGCAACAGT
TGTCCCTGTCGGTAATGCTCATCAAATCAGTTATCCAACAAACTCTTATG
GTGGAGGGTATTCACCAGTTGAATACCAAAAACCTCCAAGAGGTAGAGGT
ATGGTTGCCACAAGGTTCAATCCTATTGCGAGGCCTGTTTCAAATCCTGG
TCATAATGCAGGAATGTCAATGGGAATGGGAGGAGGCCTTAATGAAGGTG
CTCCGAATGTTGTTTTCGCATACAACATAGGTCCAAATGCCACTGAGGGA
GACATGTATGCACTTTTCTCAAAATATGGTCGGATCAATAAGGTCGATGT
TGTCGCAGGGAAAGGTTATGGTTTTGTGCACATGCCTGTTTTTCATGAAG
CAAACGAAGCAGTGAGGGCGTTGAATGGTGCATTTTATAACGGAAAAAGT
CTCCAAGTGTCAATTAAAAGGCGTTGATCATTAGGATTTTAGTGGCTTCT
ACAGAGTGTGGCTCATCTCAAGTGCATAAAAATGCTTTCCTTTTTTGAGT
CATTTGTTGTACTTTGGTAAGTACTGAGAAAAAACCTTCTGATATTTTTA
TCATTCATTATTTTTAACGTTATGATCTGTAAATATTTTTTTGTTCATAT
TTTGATCCTTCACCAATGACTTTTTTTTTTAATCAACAGGATTTTTCTGA
TTTTAGGGCTATTTTGACCATTGATCACTACTCTGTATGATTTTTTTGCT
AGTTTTTTTCTATTTTTTTCTTCGATTTTATTGTTTTTTCTTGTAGTTTT
TTTGCTTTGATTTCTTGATGGAAGAATTTTGAAATTTTGTCGTTTTATTT
TATTTTTTCTTTCCATTTTGATTTTGTTTGTGTTACATTTTGAAACTTCG
TTTACTATGGCTTTTAAAATGTTATTTCAATTCTTTTATTGAAAATTGAA
ATTCCTTGTCATTTTTTTACTACAATGCATTCCGTTCTCTCTTTTCAGGC
TTAATTAAGATTATTTAAAATGGCTAGAACTATACATTTTGTGTCATGGC
TTACCGGACGTTTATTGAAGAGCTTCAAATTGGTGATTGTTGCATCCGTC
ATTTTAATGTCGTTAATTCTTCTTATGATGAAGGACGCTGATCCTCCCCC
TGGTGAAATCAAAGCTACAAAACTCTCCAAGTTGTCATTTGGTGAGGGAA
CACAAAAGATGCTAAAAAAACTTCATCCTTTGAAAACAAGAGGTGTTAAA
ACATCTGAAAGTGTACGGCAGGATGAAAGGCCTCCTTTACCAAAACATCC
TTTGAAAATTGAAAATGTTCAAATTGAAACTGAGAAAAAAGTTCAGCCAA
CACAGGTTCTCAAGGAACCTATAGCTGACAAACAAATGGATCTGAAGGAA
CCTAAGGAGAAGCCTTGTTATCACATACATACTTTCTACTACCCATGGTA
TGGTAACCCCAAGTTTGATAAAGAATACATACATTGGAACCACCAGCTGT
TACCACACTGGAACCCACAGGTGGCAAAGCATTATCCAAAAGGTGTACAC
CAGCCACCCGATGATATCGGTAGTGATTTCTTCCCTAAGTTAGGAGCGTA
CAGTTCACGTGATCCGCATGTTATTCTTAGCCATATGCAACAACTATCTT
CTGCAAACATTGGTGTTGTCATTGTGTCTTATTATCCACCCACTCAAGGT
GATGACAATGGAAAAGACTGGCAAAATGTTTTCCCAATCTTGTTAAAGAC
TGCCAATGATTATGGAATCAAGGTTGGCTTCCATATTGAGCCGTATAAGA
ATCGAAATCAAAACACAGTGAAGGATGATCTTATACATATTATTGATACC
TATTCACATTATCCAGCGTTTTTCAGGTATGACTATAACGGTAAATCTCT
TCCCATGATTTATATTTACGATTCTTACCACACTAAACCTGACGAATGGA
GTCAAGTTCTTTGGCCCAATGGGAAAAACTCTGTCCGAGGTACCAAGTAT
GATGCTTTTGTCATCGGTTTATGTGTTAAGGAGAGTGACTTGCGAGAATT
GAGACGTGGAGGATTCGATGGTTTTTATACATATTTCGCAGCAAACGGTT
TCACCTATGGATCATCCAGAAGAAACTGGCAAAATTTGCATGATTTTGCG
AAGCGATTTAACATGATTTTTATCCCCAGTGTTGGTCCTGGGTACGTGGA
CACCAGAATCAGACCGTGGAACGGTGAAAACACAAGGAACCGTTTGAAAG
GTACTTATTACAAAGACTCGTGGAAAACTGCTTTGAAGTTTCAGCCAAGA
GTCATTTCGATCACTTCTTTCAACGAATGGCACGAGGGAACACAAATTGA
GAGGGCCATACCTCACANCCCCCTGGTGAAATCAAAGCTACAAAACTCTC
CAAGTTGTCATTTGGTGAGGGAACACAAAAGATGCTAAAAAAACTTCATC
CTTTGAAAACAAGAGGTGTTAAAACATCTGAAAGTGTACGGCAGGATGAA
AGGCCTCCTTTACCAAAACATCCTTTGAAAATTGAAAATGTTCAAATTGA
AACTGAGAAAAAAGTTCAGCCAACACAGGTTCTCAAGGAACCTATAGCTG
ACAAACAAATGGATCTGAAGGAACCTAAGGAGAAGCCTTGTTATCACATA
CATACTTTCTACTACCCATGGTATGGTAACCCCAAGTTTGATAAAGAATA
CATACATTGGAACCACCAGCTGTTACCACACTGGAACCCACAGGTGGCAA
AGCATTATCCAAAAGGTGTACACCAGCCACCCGATGATATCGGTAGTGAT
TTCTTCCCTAAGTTAGGAGCGTACAGTTCACGTGATCCGCATGTTATTCT
TAGCCATATGCAACAACTATCTTCTGCAAACATTGGTGTTGTCATTGTGT
CTTATTATCCACCCACTCAAGGTGATGACAATGGAAAAGACTGGCAAAAT
GTTTTCCCAATCTTGTTAAAGACTGCCAATGATTATGGAATCAAGGTCGG
CTTCCATATTGAGCCGTATAAGAATCGAAATCAAAACACAGTGAAGGATG
ATCTTATACATATTATTGATACCTATTCACATTATCCAGCGTTTTTCAGG
TATGACTATAACGGTAAATCTCTTCCCATGATTTATATTTACGATTCTTA
CCACACTAAACCTGACGAATGGAGTCAAGTTCTTTGGCCCAATGGGAAAA
ACTCTGTCCGAGGTACCAAGTATGATGCTTTTGTCATCGGTTTATGTGTT
AAGGAGAGTGACTTGCGAGAATTGAGACGTGGAGGATTCGATGGTTTTTA
TACATATTTCGCAGCAAACGGTTTCACCTATGGATCATCCAGAAGAAACT
GGCAAAATTTGCATGATTTTGCGAAGCGATTTAACATGATTTTTATCCCC
AGTGTTGGTCCTGGGTACGTGGACACCAGAATCAGACCGTGGAACGGTGA
AAACACAAGGAACCGTTTGAAAGGTACTTATTACAAAGACTCGTGGAAAA
CTGCTTTGAAGTTTCAGCCAAGAGTCATTTCGATCACTTCTTTCAACGAA
TGGCACGAGGGAACACAAATTGAGAGAGCCATACCTCACATGACAGGTGA
TTACCACTATAAAGACTATGAACCACATTCTTCTGACTATTATCTGGAAT
TGACCAAAAAATTCGCCAAGGAGTTCAAACAATGTGCAAATCCAGATTCG
GGATTGAGATTTTAATTTGTCATTGTTTACTTCATCGGTATAGTTTGAAG
TCTGATCTTTGAAGAAAGCTCAAATAAGTCCTTCAAAGTTTTTTGATTTT
TTTTCCTACAGAAAGATCCGATACGGATATTGTATAAGATTCAAATTCTA
AATTTCTCACCCTAATATAGAAATTTTTGGAAGCCCTACTTTTTTTCAAA
CTCCCCGTTTATTTGGAACCTAAAATACTAGTATTGTATGTACGAAAACC
TCACCAATTCTGCCCTGAATCTTATTTCTCATTTCATATATCTCATAATT
AATTCTCGTTCAGTTTTATAGAAAGTTTGTATATTTAATGCATTTTATTT
ATTCTATATACGCGTTGTGAAGTTTTATTTTGTTTTTAACTAATTAATAG
AGCATATTTTTTGAAGAAAGGGTTAAAGTATAACAG Coding sequence (CDS) from alignment at sc0000211:284920..297105- >TCONS_00015474 ID=TCONS_00015474|Name=TCONS_00015474|organism=Clytia hemisphaerica|type=CDS|length=2946bp|location=Sequence derived from alignment at sc0000211:284920..297105- (Clytia hemisphaerica) ATGACAGGTGATTACCACTATAAAGACTATGAACCACATTCTTCTGACTA TTATCTGGAATTGACCAAAAAATTCGCCAAGGAGTTCAAACAATGTGCAA ATCCAGATTCGGGATTGAGATTTTAAATGGCTAGAACTATACATTTTGTG TCATGGCTTACCGGACGTTTATTGAAGAGCTTCAAATTGGTGATTGTTGC ATCCGTCATTTTAATGTCGTTAATTCTTCTTATGATGAAGGACGCTGATC CTCCCCCTGGTGAAATCAAAGCTACAAAACTCTCCAAGTTGTCATTTGGT GAGGGAACACAAAAGATGCTAAAAAAACTTCATCCTTTGAAAACAAGAGG TGTTAAAACATCTGAAAGTGTACGGCAGGATGAAAGGCCTCCTTTACCAA AACATCCTTTGAAAATTGAAAATGTTCAAATTGAAACTGAGAAAAAAGTT CAGCCAACACAGGTTCTCAAGGAACCTATAGCTGACAAACAAATGGATCT GAAGGAACCTAAGGAGAAGCCTTGTTATCACATACATACTTTCTACTACC CATGGTATGGTAACCCCAAGTTTGATAAAGAATACATACATTGGAACCAC CAGCTGTTACCACACTGGAACCCACAGGTGGCAAAGCATTATCCAAAAGG TGTACACCAGCCACCCGATGATATCGGTAGTGATTTCTTCCCTAAGTTAG GAGCGTACAGTTCACGTGATCCGCATGTTATTCTTAGCCATATGCAACAA CTATCTTCTGCAAACATTGGTGTTGTCATTGTGTCTTATTATCCACCCAC TCAAGGTGATGACAATGGAAAAGACTGGCAAAATGTTTTCCCAATCTTGT TAAAGACTGCCAATGATTATGGAATCAAGGTTGGCTTCCATATTGAGCCG TATAAGAATCGAAATCAAAACACAGTGAAGGATGATCTTATACATATTAT TGATACCTATTCACATTATCCAGCGTTTTTCAGGTATGACTATAACGGTA AATCTCTTCCCATGATTTATATTTACGATTCTTACCACACTAAACCTGAC GAATGGAGTCAAGTTCTTTGGCCCAATGGGAAAAACTCTGTCCGAGGTAC CAAGTATGATGCTTTTGTCATCGGTTTATGTGTTAAGGAGAGTGACTTGC GAGAATTGAGACGTGGAGGATTCGATGGTTTTTATACATATTTCGCAGCA AACGGTTTCACCTATGGATCATCCAGAAGAAACTGGCAAAATTTGCATGA TTTTGCGAAGCGATTTAACATGATTTTTATCCCCAGTGTTGGTCCTGGGT ACGTGGACACCAGAATCAGACCGTGGAACGGTGAAAACACAAGGAACCGT TTGAAAGGTACTTATTACAAAGACTCGTGGAAAACTGCTTTGAAGTTTCA GCCAAGAGTCATTTCGATCACTTCTTTCAACGAATGGCACGAGGGAACAC AAATTGAGAGGGCCATACCTCACATGACAGGTGATTACCACTATAAAGAC TATGAACCACATTCTTCTGACTATTATCTGGAATTGACCAAAAAATTCGC CAAGGAGTTCAAACAATGTGCAAATCCAGATTCGGGATTGAGATTTTAAA TGGCTAGAACTATACATTTTGTGTCATGGCTTACCGGACGTTTATTGAAG AGCTTCAAATTGGTGATTGTTGCATCCGTCATTTTAATGTCGTTAATTCT TCTTATGATGAAGGACGCTGATCCTCCCCCTGGTGAAATCAAAGCTACAA AACTCTCCAAGTTGTCATTTGGTGAGGGAACACAAAAGATGCTAAAAAAA CTTCATCCTTTGAAAACAAGAGGTGTTAAAACATCTGAAAGTGTACGGCA GGATGAAAGGCCTCCTTTACCAAAACATCCTTTGAAAATTGAAAATGTTC AAATTGAAACTGAGAAAAAAGTTCAGCCAACACAGGTTCTCAAGGAACCT ATAGCTGACAAACAAATGGATCTGAAGGAACCTAAGGAGAAGCCTTGTTA TCACATACATACTTTCTACTACCCATGGTATGGTAACCCCAAGTTTGATA AAGAATACATACATTGGAACCACCAGCTGTTACCACACTGGAACCCACAG GTGGCAAAGCATTATCCAAAAGGTGTACACCAGCCACCCGATGATATCGG TAGTGATTTCTTCCCTAAGTTAGGAGCGTACAGTTCACGTGATCCGCATG TTATTCTTAGCCATATGCAACAACTATCTTCTGCAAACATTGGTGTTGTC ATTGTGTCTTATTATCCACCCACTCAAGGTGATGACAATGGAAAAGACTG GCAAAATGTTTTCCCAATCTTGTTAAAGACTGCCAATGATTATGGAATCA AGGTTGGCTTCCATATTGAGCCGTATAAGAATCGAAATCAAAACACAGTG AAGGATGATCTTATACATATTATTGATACCTATTCACATTATCCAGCGTT TTTCAGGTATGACTATAACGGTAAATCTCTTCCCATGATTTATATTTACG ATTCTTACCACACTAAACCTGACGAATGGAGTCAAGTTCTTTGGCCCAAT GGGAAAAACTCTGTCCGAGGTACCAAGTATGATGCTTTTGTCATCGGTTT ATGTGTTAAGGAGAGTGACTTGCGAGAATTGAGACGTGGAGGATTCGATG GTTTTTATACATATTTCGCAGCAAACGGTTTCACCTATGGATCATCCAGA AGAAACTGGCAAAATTTGCATGATTTTGCGAAGCGATTTAACATGATTTT TATCCCCAGTGTTGGTCCTGGGTACGTGGACACCAGAATCAGACCGTGGA ACGGTGAAAACACAAGGAACCGTTTGAAAGGTACTTATTACAAAGACTCG TGGAAAACTGCTTTGAAGTTTCAGCCAAGAGTCATTTCGATCACTTCTTT CAACGAATGGCACGAGGGAACACAAATTGAGAGGGCCATACCTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00015474-exon-sc0000211-1575043694:297010..297105 | TCONS_00015474-exon-sc0000211-1575043694:297010..297105 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1575043694:289598..290121 | TCONS_00015474-exon-sc0000211-1575043694:289598..290121 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1575043694:288490..289130 | TCONS_00015474-exon-sc0000211-1575043694:288490..289130 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1575043694:286690..288057 | TCONS_00015474-exon-sc0000211-1575043694:286690..288057 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1575043694:284920..285466 | TCONS_00015474-exon-sc0000211-1575043694:284920..285466 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1510915933:297010..297105 | TCONS_00015474-exon-sc0000211-1510915933:297010..297105 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1510915933:289598..290121 | TCONS_00015474-exon-sc0000211-1510915933:289598..290121 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1510915933:288490..289130 | TCONS_00015474-exon-sc0000211-1510915933:288490..289130 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1510915933:286690..288057 | TCONS_00015474-exon-sc0000211-1510915933:286690..288057 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1510915933:284920..285466 | TCONS_00015474-exon-sc0000211-1510915933:284920..285466 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1491911889:297010..297105 | TCONS_00015474-exon-sc0000211-1491911889:297010..297105 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1491911889:289598..290121 | TCONS_00015474-exon-sc0000211-1491911889:289598..290121 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1491911889:288490..289130 | TCONS_00015474-exon-sc0000211-1491911889:288490..289130 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1491911889:286690..288057 | TCONS_00015474-exon-sc0000211-1491911889:286690..288057 | Clytia hemisphaerica | exon |
TCONS_00015474-exon-sc0000211-1491911889:284920..285466 | TCONS_00015474-exon-sc0000211-1491911889:284920..285466 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000211 | supercontig | sc0000211:284920..297105 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR026071 | Glyco_Hydrolase_99 |
Vocabulary: Molecular Function
Term | Definition |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
Blast
BLAST of TCONS_00015474 vs. Swiss-Prot (Human)
Match: MANEA (Glycoprotein endo-alpha-1,2-mannosidase OS=Homo sapiens GN=MANEA PE=1 SV=1) HSP 1 Score: 419.853 bits (1078), Expect = 4.207e-135 Identity = 196/387 (50.65%), Postives = 274/387 (70.80%), Query Frame = 2
Query: 1568 KIENVQIETE-KKVQPTQVLKEPIADKQMDLKEPKEKPCYHIHTFYYPWYGNPKFDKEYIHWNHQLLPHWNPQVAKHYPKGVHQPPDDIGSDFFPKLGAYSSRDPHVILSHMQQLSSANIGVVIVSYYPPTQGDDNGKDWQNVFPILLKTANDYGIKVGFHIEPYKNRNQNTVKDDLIHIIDTYSHYPAFFRYDY-NGKSLPMIYIYDSYHTKPDEWSQVLWPNGKNSVRGTKYDAFVIGLCVKESDLRELRRGGFDGFYTYFAANGFTYGSSRRNWQNLHDFAKRFNMIFIPSVGPGYVDTRIRPWNGENTRNRLKGTYYKDSWKTALKFQPRVISITSFNEWHEGTQIERAIPHMTGDYHYKDYEPHSSDYYLELTKKFAKEFKQ 2722
K + + ET K ++ ++ +P +++L E Y +H FYY WYGNP+FD +YIHWNH +L HW+P++AK+YP+G H PPDDIGS F+P+LG+YSSRDP VI +HM+Q+ SA+IGV+ +S+YPP D+NG+ N+ P +L A+ Y +KV FHIEPY NR+ + ++ +IID Y ++PAF+RY G +LPM Y+YDSY TKP++W+ +L +G S+R + YD I L V+E ++ + GFDG YTYFA NGFTYGSS +NW +L F ++N+IFIPSVGPGY+DT IRPWN +NTRNR+ G YY+ AL+ +P +ISITSFNEWHEGTQIE+A+P T + Y DY PH YLELT+K+++++ +
Sbjct: 63 KSDRINSETNTKNLKSVEITMKPSKASELNLDELPPLNNY-LHVFYYSWYGNPQFDGKYIHWNHPVLEHWDPRIAKNYPQGRHNPPDDIGSSFYPELGSYSSRDPSVIETHMRQMRSASIGVLALSWYPPDVNDENGEPTDNLVPTILDKAHKYNLKVTFHIEPYSNRDDQNMYKNVKYIIDKYGNHPAFYRYKTKTGNALPMFYVYDSYITKPEKWANLLTTSGSRSIRNSPYDGLFIALLVEEKHKYDILQSGFDGIYTYFATNGFTYGSSHQNWASLKLFCDKYNLIFIPSVGPGYIDTSIRPWNTQNTRNRINGKYYEIGLSAALQTRPSLISITSFNEWHEGTQIEKAVPKRTSNTVYLDYRPHKPGLYLELTRKWSEKYSK 448
The following BLAST results are available for this feature:
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