TCONS_00015475 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015475
Unique NameTCONS_00015475
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4399

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015475 ID=TCONS_00015475|Name=TCONS_00015475|organism=Clytia hemisphaerica|type=transcript|length=4399bp
GAAAAGGTCCATATGACTGTGATTGTAATGGGAATCCATTTTGGTGCCAG
CGAGGAGCCAGCGATGATGTACAACATGCTTCAATGATTAAGAATGaaaa
aaaattataaaaaaccaTGGAAGGCATTGGAGCCAAAGGATTGAGAACAA
AGTTAATTGTAAATTATTTACCACAGTCTATGACTGATCTTGAATTCAAG
AGCTTGTTTGCAACTATTGGTCCTGTAGAGAGTTATAAAATATTAAGAGA
TACAGCCACTAATTACAGTTTTGGGTATGGCTTCATTGATTTTCAAAAGC
CAGAGAGTGCTGACAGGGCCATTGCTGATTTAAACGGACATAAAATTGCC
AACAAAACTCTACGAGTAGCTTTTTCAAAACCTCAAGGAGCCAGTAAAAA
TATCAATCTTTTTGTTCAAGGTCTTGGCCATCGAACAGATGAAGAAATAC
TTCAAAATTTGTTCAGTCCTTATGGAGAAATTGTTAATGTTAAAGTTGTT
AGGGATGCTGGTAATAATTCAAGAGggtttggttttgttttattCAAAGA
TAAGTCTCAAGCAGACGCAGCTATCAGAGCATTGCAAGGTCACTGTGATG
GGTATGGTATGGACCTGCAGATAAAATATGCCAAAGAATCTTCAGAGCAA
CAGAGAACCCATCAAAGGTACAAAGAGTTTGTAAGATCAAGTTACCAACC
AGTCCAACCTGTCACAGTGAATTATAATGGGGATTATGCAACAGTTGTCC
CTGTCGGTAATGCTCATCAAATCAGTTATCCAACAAACTCTTATGGTGGA
GGGTATTCACCAGTTGAATACCAAAAACCTCCAAGAGGTAGAGGTATGGT
TGCCACAAGGTTCAATCCTATTGCGAGGCCTGTTTCAAATCCTGGTCATA
ATGCAGGAATGTCAATGGGAATGGGAGGAGGCCTTAATGAAGGTGCTCCG
AATGTTGTTTTCGCATACAACATAGGTCCAAATGCCACTGAGGGAGACAT
GTATGcacttttctcaaaatatggTCGGATCAATAAGGTCGATGTTGTCG
CAGGGAAAGGTTATGGTTTTGTGCACATGCCTGTTTTTCATGAAGCAAAC
GAAGCAGTGAGGGCGTTGAATGGTGCATTTTATAACGGAAAAAGTCTCCA
AGTGTCAATTAAAAGGCGTTGATCATTAGGATTTTAGTGGCTTCTACAGA
GTGTGGCTCATCTCAAGTGCATAAAAATGCTTTCCTTTTTTGAGTCATTT
GTTGTACTTTGGCTTAATTAAGATTATTTAAAATGGCTAGAACTATACAT
TTTGTGTCATGGCTTACCGGACGTTTATTGAAGAGCTTCAAATTGGTGAT
TGTTGCATCCGTCATTTTAATGTCGTTAATTCTTCTTATGATGAAGGACG
CTGATCCTCCCCCTGGTGAAATCAAAGCTACAAAACTCTCCAAGTTGTCA
TTTGGTGAGGGAACACAAAAGATGCTAAAAAAACTTCATCCTTTGAAAAC
AAGAGGTGTTAAAACATCTGAAAGTGTACGGCAGGATGAAAGGCCTCCTT
TACCAAAACAtcctttgaaaattgaaaatgttcaaattgAAACTGAGAAA
AAAGTTCAGCCAACACAGGTTCTCAAGGAACCTATAGCTGACAAACAAAT
GGATCTGAAGGAACCTAAGGAGAAGCCTTGTTATCACATACATACTTTCT
ACTACCCATGGTATGGTAACCCCAAGTTTGATAAAGAATACATACATTGG
AACCACCAGCTGTTACCACACTGGAACCCACAGGTGGCAAAGCATTATCC
AAAAGGTGTACACCAGCCACCCGATGATATCGGTAGTGATTTCTTCCCTA
AGTTAGGAGCGTACAGTTCACGTGATCCGCATGTTATTCTTAGCCATATG
CAACAACTATCTTCTGCAAACATTGGTGTTGTCATTGTGTCTTATTATCC
ACCCACTCAAGGTGATGACAATGGAAAAGACTGGCAAAATGTTTTCCCAA
TCTTGTTAAAGACTGCCAATGATTATGGAATCAAGGTTGGCTTCCATATT
GAGCCGTATAAGAATCGAAATCAAAACACAGTGAAGGATGATCTTATACA
TATTATTGATACCTATTCACATTATCCAGCGTTTTTCAGGTATGACTATA
ACGGTAAATCTCTTCCCATGATTTATATTTACGATTCTTACCACACTAAA
CCTGACGAATGGAGTCAAGTTCTTTGGCCCAATGGGAAAAACTCTGTCCG
AGGTACCAAGTATGATGCTTTTGTCATCGGTTTATGTGTTAAGGAGAGTG
ACTTGCGAGAATTGAGACGTGGAGGATTCGATGGTTTTTATACATATTTC
GCAGCAAACGGTTTCACCTATGGATCATCCAGAAGAAACTGGCAAAATTT
GCATGATTTTGCGAAGCGATTTAACATGATTTTTATCCCCAGTGTTGGTC
CTGGGTACGTGGACACCAGAATCAGACCGTGGAACGGTGAAAACACAAGG
AACCGTTTGAAAGGTACTTATTACAAAGACTCGTGGAAAACTGCTTTGAA
GTTTCAGCCAAGAGTCATTTCGATCACTTCTTTCAACGAATGGCACGAGG
GAACACAAATTGAGAGGGCCATACCTCACANCCCCCTGGTGAAATCAAAG
CTACAAAACTCTCCAAGTTGTCATTTGGTGAGGGAACACAAAAGATGCTA
AAAAAACTTCATCCTTTGAAAACAAGAGGTGTTAAAACATCTGAAAGTGT
ACGGCAGGATGAAAGGCCTCCTTTACCAAAACAtcctttgaaaattgaaa
atgttcaaattgAAACTGAGAAAAAAGTTCAGCCAACACAGGTTCTCAAG
GAACCTATAGCTGACAAACAAATGGATCTGAAGGAACCTAAGGAGAAGCC
TTGTTATCACATACATACTTTCTACTACCCATGGTATGGTAACCCCAAGT
TTGATAAAGAATACATACATTGGAACCACCAGCTGTTACCACACTGGAAC
CCACAGGTGGCAAAGCATTATCCAAAAGGTGTACACCAGCCACCCGATGA
TATCGGTAGTGATTTCTTCCCTAAGTTAGGAGCGTACAGTTCACGTGATC
CGCATGTTATTCTTAGCCATATGCAACAACTATCTTCTGCAAACATTGGT
GTTGTCATTGTGTCTTATTATCCACCCACTCAAGGTGATGACAATGGAAA
AGACTGGCAAAATGTTTTCCCAATCTTGTTAAAGACTGCCAATGATTATG
GAATCAAGGTCGGCTTCCATATTGAGCCGTATAAGAATCGAAATCAAAAC
ACAGTGAAGGATGATCTTATACATATTATTGATACCTATTCACATTATCC
AGCGTTTTTCAGGTATGACTATAACGGTAAATCTCTTCCCATGATTTATA
TTTACGATTCTTACCACACTAAACCTGACGAATGGAGTCAAGTTCTTTGG
CCCAATGGGAAAAACTCTGTCCGAGGTACCAAGTATGATGCTTTTGTCAT
CGGTTTATGTGTTAAGGAGAGTGACTTGCGAGAATTGAGACGTGGAGGAT
TCGATGGTTTTTATACATATTTCGCAGCAAACGGTTTCACCTATGGATCA
TCCAGAAGAAACTGGCAAAATTTGCATGATTTTGCGAAGCGATTTAACAT
GATTTTTATCCCCAGTGTTGGTCCTGGGTACGTGGACACCAGAATCAGAC
CGTGGAACGGTGAAAACACAAGGAACCGTTTGAAAGGTACTTATTACAAA
GACTCGTGGAAAACTGCTTTGAAGTTTCAGCCAAGAGTCATTTCGATCAC
TTCTTTCAACGAATGGCACGAGGGAACACAAATTGAGAGAGCCATACCTC
ACATGACAGGTGATTACCACTATAAAGACTATGAACCACATTCTTCTGAC
TATTATCTGGAATTGACCAAAAAATTCGCCAAGGAGTTCAAACAATGTGC
AAATCCAGATTCGGGATTGAGATTTTAATTTGTCATTGTTTACTTCATCG
GTATAGTTTGAAGTCTGATCTTTGAAGAAAGCTCAAATAAGTCcttcaaa
gttttttgattttttttcctacAGAAAGATCCGATACGGATATTGTATAA
GATTCAAATTCTAAATTTCTCACCCTAATATAGAAATTTTTGGAAGCCCT
ACTTTTTTTCAAActccccgtttatttggaacctaaaatACTAGTATTGT
ATGTACGAAAACCTCACCAATTCTGCCCTGaatcttatttctcatttcat
aTATCTCATAATTAATTCTCGTTCAGTTTTATAGAAAGTTTGTatattta
atgcattttatttATTCTATATACGCGTTGtgaagttttattttgttttt
aactaaTTAATAGAgcatattttttgaagaaagggTTAAAGTATAACAG
Run BLAST on NCBI

transcript from alignment at sc0000211:284920..297105-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015475 ID=TCONS_00015475|Name=TCONS_00015475|organism=Clytia hemisphaerica|type=transcript|length=12186bp|location=Sequence derived from alignment at sc0000211:284920..297105- (Clytia hemisphaerica)
GAAAAGGTCCATATGACTGTGATTGTAATGGGAATCCATTTTGGTGCCAG
CGAGGAGCCAGCGATGATGTACAACATGCTTCAATGATTAAGAATGGTAG
GTATATCTTTTTATGGCTGGGGACTTCAATTCCATTGTATTGTATTCAAG
CCAGACAATTCAGTGGGGATGGAAGAAATATATTTACAAAGCACAATATT
TAGCACGCCGAGTCCATTATCTTTTCTCACATGCCCAATATTTTTCATAT
TGATTGGTAAGTAAGTAAGTAAGTAAGTATTTATTTACCATTTAACACTA
CAAAAAAAGATACAAGTGATGTAATGCACAAAAAAATATATGGAGGGAGA
CCGCCTTATAGTCTAGCTAATCAAAAAGATGCGGCCACCTTGGATGAGAC
TGTGTCCAAATAAATGGTTTATTATCCGTTCATTGCTAAAGTATTTCTCG
TTTTCAAACATAATTCCAATTTATAAGCTCATAAATCTGGTTTCTTGGTA
GTTTTTTATTCAAAAGTCTTTTTTATTTTGTGACGTAACGTCAAAAAGAA
GATGGTCAATTCCAACAATTGTCATGAACTCGTTGTATGACGTCAATTTT
TGCCTCCATGGAAGCTAAATATTCTAAAATATTGGACAGCAAATGCCGCT
ATTTATGCGCGTCGGATAATAATCTGCAATAATTTGCATTGAGGATTTGC
TTTATAAAAAGGGACTAATGTTTTTATGATTATTTTTTTCCATACTGTAT
ATCTGTTTTTTTTTCAGTGGGGACAAAGATTAGGGTGTAATAGTCCGGAG
GGGGTACTAGGGTTGCGAGCCCACAGGGGTGGCGCCCAACTTTTGACCCT
TCGACCCTTACCGGGACTAAAAAGGAGAAAACAAAGGAAAATTTTGTGGA
TTTTACAACCCTTATCGAGAAAAATTTGACCAATATCGATCTTTCCAGGG
GTAAAAAAAGTTGAAATTTTCCTATTTTTCCAACCCTTAGTGGGACATTC
CATTTGCCTATGCCCCCCGGTATTAGAGGGTATAATTTTCCACTGGGTAC
GATATTTTTGCCAATTTTTCCACTGGAAAGGAGTTCCAGTGGGTCGTCTG
TGCGATGGGGCGGGTGCTAGGATATTCTTTAAAATAGTAGGATGAATTTA
ATGCTATCATGGGGGGGTTTGTACGTTTACGGTGTGACGGGATTGGCCCT
TTTTTAGTACGGTATTATTACGGGATTTGACGAAAAAAGAGACGAGAAAA
CGGTATTTTAAAATCAGGCAGTGACGGTATTCAGGTACACTTTTGCCCTG
TACAAGCCGGTGTGACGGTGTTATTATTTTTTCAATTTTCGGGATTACAG
GATTCAGCAAAAATTTTGACGGGAAAACGGTATTTCGAATCCCTTCAAAC
CCCCCCCCTATCATGACAGCGTAACTTAGATATTTTATACTCTACTGTAA
TCAGTATATATAGACTTAAACTTGTATATCAAGATTACGAGATTTCGAGT
ATGGGCCGATTTTACTTAGTTTTCAGTGGTTTCATTTTCAATTTCAAGCC
AATATCTTAGCAACCGAGAGCTCGTCCATAGTTACAGGGAATTGAGCAAA
AAAACAAACATAGGAAGTTTTCCAAATCCCCTACAGTATTTCAATTAAAA
CCAATAAAAAATGAAACTTTTCCATGTTTCTCTTTTTTCCACCAATTCTT
CAAAATGAAAATGTTTAAGATTTAAAGTTCTTCTTTTATTCAATGATTTT
TTACGGCACTTTGTTGACAATCTAACTCTCCCATCAAATTCCCGCTTTCT
TCAGTAAATTGAAGATGAGAAAAAACCTAAGCCTTAGAATCACAGATTGA
AAAAAAATTATGAAGGGTGGGATTTTACAGCCGCCTGTCGTGCAAGGCAC
TGAGAGGCCACAGGTGCCAAAAAGAAGGGCCATTTGAATGCAGCAATCTC
ATTGGTGGAAATTTTATAAACGGCTGCACTGCAAAGGAGCGCCAGGAAGC
AATCAGTAGAAGAGACCACTTTCGTTTTTGTTGCAGATTTCGATATAAAC
TTCTCTCAGTCAGGGATTACTTGTCAATGTGTTGTGTCAACTTGTCAACA
TTGTATTGAAAGATAAAAGAGGTAAGACTAGCCTAGTTTCTAATCCTGAT
ATGGGAGTTTAAGTTTAGACTGCTAATTTGGTTAGCTACAAAGCGAAATC
ACATTCATTTTTGATTGAGGATGATTTTTTTGTGTCAATCTTTGGTAAAA
TCATCATTAGTTGTCAAAATTTTGCCTAATAATCATATTAAAAAATATTC
CATTTTTTGAAATATGGGAAAGACAAAATTTCCTTATTTTAATTCATATG
AAATAATGTGTCTGGTATGAAACGGGAGCACTTATGTAAAAATAAATCTC
TTTAAATAGTGATTGGAAAATAGTTTTATTTTATTTTTGGCGTGTGGAAA
ACAGTGCTTTTTAATGATTTTCGAAACTTTTAAACTTTATTTATTTTTGC
CTCACTACACCAGAAAAAATTCTCAGACCAGAAAAATTGTACTCAAGAAA
AATGTTACTCAAGAAAAATGTTGACATAATTTTTCTCAAAAATGTTTACA
GATCACATGGGTTTTATTTTTGTTCTTGAAATTAGGTAACTTTGTCTACC
GTTTTTCTCAACATTTCTCGCAACTCTTGAATAATTGAGGCAAATACAGT
ATCCCACTTTTTGAGTTTATAACACCTTCTTTTAGGGCCTGTAGAGCCAG
ATTGAAACAATTTGATCAACATTTGATCTTTGTTAGTAGGTTAACACCTT
TCGACAAAAATAAAATTCCTAAAATGCTCAAAAGCTGAGTAATAATGGAG
GCTTAAATTTGTCAAAAAATGAGTTTTGTGCCATATCTAACCCTCCATTA
TGGAAAGTGAGATCAAGGTCACATAGGTTTTTTTGGATTTTTTTACTGTG
AGTACTTTCAGAAAATCAAAAAACCCATATCGTCGCATGAGAAATAAAGA
GACTTGTCTCCAATTTTTCAAAAAATGAGACAATGATTGATCCATATTCT
TCAGAAAATATTCTTGGAGATAAACGGACCTAAATCCATGAGGTTTGACT
TTTTGGCCTTAAATTTGGATACTATCTCTATTTTTTTAAATGGATTGCAG
ATTTGAACAAATTGTATAAAAGACAACCCTAAATCCAAAGTAAAAAAACT
TAAATCCATTTTTTATATGTAAAGTAATAGGTAACAAAATTCACAATTTT
GAGAAGTAAAAAGATTTGTCTCCATTTTCTGGCGATAACTCTTTTTATTT
CTAAATTTTTAAATGCTAATATCTCAACACATGGAAAATGGAGACAAGTC
TCTTCATTTCTCATGTAACGATATGACCTTAGTTGCAACTTGAAATATTT
TCTCTCAAAGCCAAGACTTTTACACTTGACAAAAATACTTCAACCAGCCC
TCAAGCTGCCGTTATGGATTTTTGGGATCGAAAATTTTAGTGTTTTTTAT
TATTGTCTGCTAAATATCCAAAAGTAAATGCAAACTAAATTTCATACTAC
CAAAATTGTCCAAAACTGCCTGGTTCTTAGAGCTTAGGATGTTTTGAAAA
AGGTATGAATCTAACATTCCTTTTACGAATTAGGCTGGGCTTAAAAAATT
GTTGGTTTGCTGTCACCCGACCCTAGATTTTAGAGGTGGGTCGGTCGGTC
GGAATTTTTTTTTATTTTGGCGATTTATGAAATTTTTGTCCGTGGAAGGG
TTAACAGTTTGTTTACATTTAGGTAATTTTGAATAAAAAACAGAAGTGCT
AGCAGGGAATTTACGATTCTTATGCTTGCAAGATACGAGTTTTGATTTTT
TATTGTTTGAAGTTTTTGAAGGAAAAAAATCTTTAAAATGGCAATAAAAT
TTTTTGGGTCGGCAGGTTTCGAGGTAGGGTCGGTCAAGTGACGGCAAACC
AACAATTTTTTAAGTCCAGCCTTATGCCTTGAAAATATCTAGATCAGTTT
GTTACAAATACAAGCTATGTGAAAACTCTATTTTCATTTCTATTTGGTTG
ACTTGCAGGAGGCTTTGAGGGCTATTTTCGCAATCATAGACGCTTTCAAT
GAACGCCCCATTAGCACCTTGGACTGACTACCCAATTCCCCTCACATGGC
ATGGGTTGACCCGGGCGAAGGTTTAAAGACATAAAGCTACTTACTGTAAA
TGGCTAAAATTAATCGCAAAAAACCTTATAGAGAGGAATTGTAACTTATG
ATAAGCTAGGTAAGAAAAATATGAAATAAAAGACAAGGGCTTCCAGAAAC
TTTCTTTTTTTCGTTAATTAGAGCCTTTAGATACATCTGCATTGAAATTG
GTGGGTTGAGTTTCCCTTTAAATGTTTTGTAGGCTCAGAATTGTGATTGA
CATTTTCATGTTCAGCCCATTTTATGGCAATACTTCTCTTTGTTTCACTG
TTATAATTTTGTTCGCATGAATATACTCCCACATAAATTTGGCATGTAAC
GTGGGGATTCTTTCGAAATTTAACTTTCTCAGGTCTCCAAACAATAAAAC
AAACTAGCCGGTACCCGGCGTCGCACGCCGGTTAAGCTGTAGCTGAACGC
ACTAAAAGTCCTTTGGATGTTGAAGCTGGCTTAAAAAAAGCGATCAAATA
AAAAAAAGAAATCTGTACAACGTTTAACTCTAACCTTCCCCGGGTGTCTT
ATCTTTTAACCATATTTGGATCGTTTACTGCCCTCCCGAGACATAAAGCC
CTAGCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGGTAG
TTATTTTTCTCGCTTCGCTCGCGTTAAATATGCCGTCCAGTTTAAATGAC
AATTTTTCAGGAAAAAGTGGGAAGGTCACAAAGAATAGTGCAACCATTTG
TTTTTTATCAGATCAAAGAAAAAATAAGACAATTTAAAGTTGCTTTTTTA
AAGGGGGGGTTTCACGTTTGACGGAGGAGCGGAATCGGCCCTTTTTTCGG
ACAGAGTGGCGGAATTTGGCGAAAATTTAGACGGAATTACGGAAATTGGG
TTCTCTGACGGAGACGGAAAATCAGACAATTTTAGTGCGGAAAAACGGAA
TTTAGCAAAAAAAATTGCGGAATTTCGAAATTGTTAAAAGATATTCCAAA
TTTGTGGAATTTTCAACAAAAATATTGAATTTCAAAGGAATTTTCGGTGA
CGGAATTTTGGTTCAATTTAAGACGGTTTGACGGAAATTGGAGAAAAAAT
TGGCGGAATTGCGGAATCAGGTACCCCCTGAAACCCCCCCCCCTTTTAAA
CCCTTGGCATAATTTTTCGAATTTGAACATATAGTAGAGGGAATTTTGTA
AAATCGCTTGACTGTTTTGTTAGAAGCACTTGTTATACATTTTTGGAAAG
CTAAGGGGTAGGGGAATCGAAATTACTATGTTTCCAATTTTTTTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATA
ACAAGTGCTTCTAACAAAACAGTCAAGCGATTCCAAAAAATCGAACAAAA
TTCCCCCTACTAATAAAAAATGACAGACTAAACGAAGACTTGAATATTTT
TATAAGAAGAAAGAGGTAAACTAATTTTTTCTTATGCTTGATATCGCCCT
TTGAATGCTGGTTGTTGTCCACAAACTTTTTGATTTTAATGTTTTGATTT
ACTTTTGAAATGTTCTTTTCTATGAAATGAAATTGTTTTGTTTTGAAAAG
AATTCGAATGTCATTTATACGATCGTTAAATACATTCGAAAACATTTAAA
ACAAAAGAAGAGAGAAAAAGACAACTCTGGGCAGAAATTAAAATTACTAA
AAATGTAGATGGGCCTTAAATTTCAAAACAAAGGCTGAATAAAGTCTAAA
CAAAGCTCTATCCGATCTTTTACAAATGGCGCGAATCCAATGGAACAAAT
TTGTGGAGCAAGAGACTAAAAGTCATAATTTTAAAACACAAACAAAGCGA
AAACGAAAGTGGTGACACACAGACACACAAAGCACCGCTATTAATATATA
GATAAAAATTTAATAATAATTATTATTGAGTTGATGGAATCTTTGAGGAA
CTTTTTTGGGGCATTTTTGTTGTTTTCACAGAATGGAATCCAATTTTGAT
TGTCTTTCAGGTCAATATCAGATTTTGGATTTCTTGGGTTGTTTTTCTTG
TCAGAAAATTGTGTAAAAATAAACAGTCGAAAAGTCGAACAGTCGAAATA
TTTTTTTTAAACGTGCACCTGTGTTTTTTGCTAGTGTTCATAGAAAAATC
CAAGTATTTTGGAATGTTGACATGAATATTTCTTTATTTTTTATTTTTTT
AACTTTATTCTTTACTCTACCTTTTGCTTTTCAGAAAAAAAATTATAAAA
AACCATGGAAGGCATTGGAGCCAAAGGATTGAGAACAAAGTTAATTGTAA
ATTATTTACCACAGTCTATGACTGATCTTGAATTCAAGAGCTTGTTTGCA
ACTATTGGTCCTGTAGAGAGTTATAAAATATTAAGAGATACAGCCACTAA
TTACAGTTTTGGGTATGGCTTCATTGATTTTCAAAAGCCAGAGAGTGCTG
ACAGGGCCATTGCTGATTTAAACGGACATAAAATTGCCAACAAAACTCTA
CGAGTAGCTTTTTCAAAACCTCAAGGAGCCAGTAAAAATATCAATCTTTT
TGTTCAAGGTCTTGGCCATCGAACAGATGAAGAAATACTTCAAAATTTGT
TCAGTCCTTATGGAGAAATTGTTAATGTTAAAGTTGTTAGGGATGCTGGT
AATAATTCAAGAGGGTTTGGTTTTGTTTTATTCAAAGATAAGTCTCAAGC
AGACGCAGCTATCAGAGCATTGCAAGGTCACTGTGATGGGTATGGTATGG
ACCTGCAGGTAACTTTATATCATTTGAGGCATTGTTTAGATTGTACTTTG
TTTTTCTTTATCTTTTATTAAAATTGACCATATATATGTAAGTATACATG
CAAAAATGATTATGCTAATTTTCCCAATAGGGAATTTTAAAAGTGTTTAA
AAAATTAATATTTTTTAGATATTTATCGATTTCGTCCTGCTACTATCTCC
TTTTCCTGTTGGCCAACAGCTGTTTTTTCATCAACAGTAAATTTATTTTA
AAAAGACATAAAATCAGAAACTTTACTCACTTTTATTCCACATGTTAAGT
AGATCATACAACCAACAAACATAGTTAAAAAGAGTGCTAAAATAAGATAC
ATACCACTTTATATTAATTACTATTTTGAACACCTTTTATTTTTGTGCAT
GTTTTCTGTGCAGAAAATTATTGAGGGATTAAGGTAAAAGTATTTGTTGT
TAAAAGTTCTTTGTTTCCTTTATAGATAAAATATGCCAAAGAATCTTCAG
AGCAACAGAGAACCCATCAAAGGTACAAAGAGTTTGTAAGATCAAGTTAC
CAACCAGTCCAACCTGTCACAGTGAATTATAATGGGGATTATGCAACAGT
TGTCCCTGTCGGTAATGCTCATCAAATCAGTTATCCAACAAACTCTTATG
GTGGAGGGTATTCACCAGTTGAATACCAAAAACCTCCAAGAGGTAGAGGT
ATGGTTGCCACAAGGTTCAATCCTATTGCGAGGCCTGTTTCAAATCCTGG
TCATAATGCAGGAATGTCAATGGGAATGGGAGGAGGCCTTAATGAAGGTG
CTCCGAATGTTGTTTTCGCATACAACATAGGTCCAAATGCCACTGAGGGA
GACATGTATGCACTTTTCTCAAAATATGGTCGGATCAATAAGGTCGATGT
TGTCGCAGGGAAAGGTTATGGTTTTGTGCACATGCCTGTTTTTCATGAAG
CAAACGAAGCAGTGAGGGCGTTGAATGGTGCATTTTATAACGGAAAAAGT
CTCCAAGTGTCAATTAAAAGGCGTTGATCATTAGGATTTTAGTGGCTTCT
ACAGAGTGTGGCTCATCTCAAGTGCATAAAAATGCTTTCCTTTTTTGAGT
CATTTGTTGTACTTTGGTAAGTACTGAGAAAAAACCTTCTGATATTTTTA
TCATTCATTATTTTTAACGTTATGATCTGTAAATATTTTTTTGTTCATAT
TTTGATCCTTCACCAATGACTTTTTTTTTTAATCAACAGGATTTTTCTGA
TTTTAGGGCTATTTTGACCATTGATCACTACTCTGTATGATTTTTTTGCT
AGTTTTTTTCTATTTTTTTCTTCGATTTTATTGTTTTTTCTTGTAGTTTT
TTTGCTTTGATTTCTTGATGGAAGAATTTTGAAATTTTGTCGTTTTATTT
TATTTTTTCTTTCCATTTTGATTTTGTTTGTGTTACATTTTGAAACTTCG
TTTACTATGGCTTTTAAAATGTTATTTCAATTCTTTTATTGAAAATTGAA
ATTCCTTGTCATTTTTTTACTACAATGCATTCCGTTCTCTCTTTTCAGGC
TTAATTAAGATTATTTAAAATGGCTAGAACTATACATTTTGTGTCATGGC
TTACCGGACGTTTATTGAAGAGCTTCAAATTGGTGATTGTTGCATCCGTC
ATTTTAATGTCGTTAATTCTTCTTATGATGAAGGACGCTGATCCTCCCCC
TGGTGAAATCAAAGCTACAAAACTCTCCAAGTTGTCATTTGGTGAGGGAA
CACAAAAGATGCTAAAAAAACTTCATCCTTTGAAAACAAGAGGTGTTAAA
ACATCTGAAAGTGTACGGCAGGATGAAAGGCCTCCTTTACCAAAACATCC
TTTGAAAATTGAAAATGTTCAAATTGAAACTGAGAAAAAAGTTCAGCCAA
CACAGGTTCTCAAGGAACCTATAGCTGACAAACAAATGGATCTGAAGGAA
CCTAAGGAGAAGCCTTGTTATCACATACATACTTTCTACTACCCATGGTA
TGGTAACCCCAAGTTTGATAAAGAATACATACATTGGAACCACCAGCTGT
TACCACACTGGAACCCACAGGTGGCAAAGCATTATCCAAAAGGTGTACAC
CAGCCACCCGATGATATCGGTAGTGATTTCTTCCCTAAGTTAGGAGCGTA
CAGTTCACGTGATCCGCATGTTATTCTTAGCCATATGCAACAACTATCTT
CTGCAAACATTGGTGTTGTCATTGTGTCTTATTATCCACCCACTCAAGGT
GATGACAATGGAAAAGACTGGCAAAATGTTTTCCCAATCTTGTTAAAGAC
TGCCAATGATTATGGAATCAAGGTTGGCTTCCATATTGAGCCGTATAAGA
ATCGAAATCAAAACACAGTGAAGGATGATCTTATACATATTATTGATACC
TATTCACATTATCCAGCGTTTTTCAGGTATGACTATAACGGTAAATCTCT
TCCCATGATTTATATTTACGATTCTTACCACACTAAACCTGACGAATGGA
GTCAAGTTCTTTGGCCCAATGGGAAAAACTCTGTCCGAGGTACCAAGTAT
GATGCTTTTGTCATCGGTTTATGTGTTAAGGAGAGTGACTTGCGAGAATT
GAGACGTGGAGGATTCGATGGTTTTTATACATATTTCGCAGCAAACGGTT
TCACCTATGGATCATCCAGAAGAAACTGGCAAAATTTGCATGATTTTGCG
AAGCGATTTAACATGATTTTTATCCCCAGTGTTGGTCCTGGGTACGTGGA
CACCAGAATCAGACCGTGGAACGGTGAAAACACAAGGAACCGTTTGAAAG
GTACTTATTACAAAGACTCGTGGAAAACTGCTTTGAAGTTTCAGCCAAGA
GTCATTTCGATCACTTCTTTCAACGAATGGCACGAGGGAACACAAATTGA
GAGGGCCATACCTCACANCCCCCTGGTGAAATCAAAGCTACAAAACTCTC
CAAGTTGTCATTTGGTGAGGGAACACAAAAGATGCTAAAAAAACTTCATC
CTTTGAAAACAAGAGGTGTTAAAACATCTGAAAGTGTACGGCAGGATGAA
AGGCCTCCTTTACCAAAACATCCTTTGAAAATTGAAAATGTTCAAATTGA
AACTGAGAAAAAAGTTCAGCCAACACAGGTTCTCAAGGAACCTATAGCTG
ACAAACAAATGGATCTGAAGGAACCTAAGGAGAAGCCTTGTTATCACATA
CATACTTTCTACTACCCATGGTATGGTAACCCCAAGTTTGATAAAGAATA
CATACATTGGAACCACCAGCTGTTACCACACTGGAACCCACAGGTGGCAA
AGCATTATCCAAAAGGTGTACACCAGCCACCCGATGATATCGGTAGTGAT
TTCTTCCCTAAGTTAGGAGCGTACAGTTCACGTGATCCGCATGTTATTCT
TAGCCATATGCAACAACTATCTTCTGCAAACATTGGTGTTGTCATTGTGT
CTTATTATCCACCCACTCAAGGTGATGACAATGGAAAAGACTGGCAAAAT
GTTTTCCCAATCTTGTTAAAGACTGCCAATGATTATGGAATCAAGGTCGG
CTTCCATATTGAGCCGTATAAGAATCGAAATCAAAACACAGTGAAGGATG
ATCTTATACATATTATTGATACCTATTCACATTATCCAGCGTTTTTCAGG
TATGACTATAACGGTAAATCTCTTCCCATGATTTATATTTACGATTCTTA
CCACACTAAACCTGACGAATGGAGTCAAGTTCTTTGGCCCAATGGGAAAA
ACTCTGTCCGAGGTACCAAGTATGATGCTTTTGTCATCGGTTTATGTGTT
AAGGAGAGTGACTTGCGAGAATTGAGACGTGGAGGATTCGATGGTTTTTA
TACATATTTCGCAGCAAACGGTTTCACCTATGGATCATCCAGAAGAAACT
GGCAAAATTTGCATGATTTTGCGAAGCGATTTAACATGATTTTTATCCCC
AGTGTTGGTCCTGGGTACGTGGACACCAGAATCAGACCGTGGAACGGTGA
AAACACAAGGAACCGTTTGAAAGGTACTTATTACAAAGACTCGTGGAAAA
CTGCTTTGAAGTTTCAGCCAAGAGTCATTTCGATCACTTCTTTCAACGAA
TGGCACGAGGGAACACAAATTGAGAGAGCCATACCTCACATGACAGGTGA
TTACCACTATAAAGACTATGAACCACATTCTTCTGACTATTATCTGGAAT
TGACCAAAAAATTCGCCAAGGAGTTCAAACAATGTGCAAATCCAGATTCG
GGATTGAGATTTTAATTTGTCATTGTTTACTTCATCGGTATAGTTTGAAG
TCTGATCTTTGAAGAAAGCTCAAATAAGTCCTTCAAAGTTTTTTGATTTT
TTTTCCTACAGAAAGATCCGATACGGATATTGTATAAGATTCAAATTCTA
AATTTCTCACCCTAATATAGAAATTTTTGGAAGCCCTACTTTTTTTCAAA
CTCCCCGTTTATTTGGAACCTAAAATACTAGTATTGTATGTACGAAAACC
TCACCAATTCTGCCCTGAATCTTATTTCTCATTTCATATATCTCATAATT
AATTCTCGTTCAGTTTTATAGAAAGTTTGTATATTTAATGCATTTTATTT
ATTCTATATACGCGTTGTGAAGTTTTATTTTGTTTTTAACTAATTAATAG
AGCATATTTTTTGAAGAAAGGGTTAAAGTATAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008635XLOC_008635Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015475-exon-sc0000211-1575043694:297010..297105TCONS_00015475-exon-sc0000211-1575043694:297010..297105Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1575043694:289598..290121TCONS_00015475-exon-sc0000211-1575043694:289598..290121Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1575043694:288490..289130TCONS_00015475-exon-sc0000211-1575043694:288490..289130Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1575043694:284920..288057TCONS_00015475-exon-sc0000211-1575043694:284920..288057Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1510915933:297010..297105TCONS_00015475-exon-sc0000211-1510915933:297010..297105Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1510915933:289598..290121TCONS_00015475-exon-sc0000211-1510915933:289598..290121Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1510915933:288490..289130TCONS_00015475-exon-sc0000211-1510915933:288490..289130Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1510915933:284920..288057TCONS_00015475-exon-sc0000211-1510915933:284920..288057Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1491911889:297010..297105TCONS_00015475-exon-sc0000211-1491911889:297010..297105Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1491911889:289598..290121TCONS_00015475-exon-sc0000211-1491911889:289598..290121Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1491911889:288490..289130TCONS_00015475-exon-sc0000211-1491911889:288490..289130Clytia hemisphaericaexon
TCONS_00015475-exon-sc0000211-1491911889:284920..288057TCONS_00015475-exon-sc0000211-1491911889:284920..288057Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:284920..297105 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0142116	0	2.63095e-09	0	0	0	0	0	0	0.287675	0	0
Blast
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BLAST of TCONS_00015475 vs. Swiss-Prot (Human)
Match: MANEA (Glycoprotein endo-alpha-1,2-mannosidase OS=Homo sapiens GN=MANEA PE=1 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 5.372e-132
Identity = 196/387 (50.65%), Postives = 274/387 (70.80%), Query Frame = 1 
Query: 2791 KIENVQIETE-KKVQPTQVLKEPIADKQMDLKEPKEKPCYHIHTFYYPWYGNPKFDKEYIHWNHQLLPHWNPQVAKHYPKGVHQPPDDIGSDFFPKLGAYSSRDPHVILSHMQQLSSANIGVVIVSYYPPTQGDDNGKDWQNVFPILLKTANDYGIKVGFHIEPYKNRNQNTVKDDLIHIIDTYSHYPAFFRYDY-NGKSLPMIYIYDSYHTKPDEWSQVLWPNGKNSVRGTKYDAFVIGLCVKESDLRELRRGGFDGFYTYFAANGFTYGSSRRNWQNLHDFAKRFNMIFIPSVGPGYVDTRIRPWNGENTRNRLKGTYYKDSWKTALKFQPRVISITSFNEWHEGTQIERAIPHMTGDYHYKDYEPHSSDYYLELTKKFAKEFKQ 3945
            K + +  ET  K ++  ++  +P    +++L E      Y +H FYY WYGNP+FD +YIHWNH +L HW+P++AK+YP+G H PPDDIGS F+P+LG+YSSRDP VI +HM+Q+ SA+IGV+ +S+YPP   D+NG+   N+ P +L  A+ Y +KV FHIEPY NR+   +  ++ +IID Y ++PAF+RY    G +LPM Y+YDSY TKP++W+ +L  +G  S+R + YD   I L V+E    ++ + GFDG YTYFA NGFTYGSS +NW +L  F  ++N+IFIPSVGPGY+DT IRPWN +NTRNR+ G YY+     AL+ +P +ISITSFNEWHEGTQIE+A+P  T +  Y DY PH    YLELT+K+++++ +
Sbjct:   63 KSDRINSETNTKNLKSVEITMKPSKASELNLDELPPLNNY-LHVFYYSWYGNPQFDGKYIHWNHPVLEHWDPRIAKNYPQGRHNPPDDIGSSFYPELGSYSSRDPSVIETHMRQMRSASIGVLALSWYPPDVNDENGEPTDNLVPTILDKAHKYNLKVTFHIEPYSNRDDQNMYKNVKYIIDKYGNHPAFYRYKTKTGNALPMFYVYDSYITKPEKWANLLTTSGSRSIRNSPYDGLFIALLVEEKHKYDILQSGFDGIYTYFATNGFTYGSSHQNWASLKLFCDKYNLIFIPSVGPGYIDTSIRPWNTQNTRNRINGKYYEIGLSAALQTRPSLISITSFNEWHEGTQIEKAVPKRTSNTVYLDYRPHKPGLYLELTRKWSEKYSK 448

HSP 2 Score: 396.356 bits (1017), Expect = 1.739e-123
Identity = 184/355 (51.83%), Postives = 254/355 (71.55%), Query Frame = 2 
Query: 1568 KIENVQIETE-KKVQPTQVLKEPIADKQMDLKEPKEKPCYHIHTFYYPWYGNPKFDKEYIHWNHQLLPHWNPQVAKHYPKGVHQPPDDIGSDFFPKLGAYSSRDPHVILSHMQQLSSANIGVVIVSYYPPTQGDDNGKDWQNVFPILLKTANDYGIKVGFHIEPYKNRNQNTVKDDLIHIIDTYSHYPAFFRYDY-NGKSLPMIYIYDSYHTKPDEWSQVLWPNGKNSVRGTKYDAFVIGLCVKESDLRELRRGGFDGFYTYFAANGFTYGSSRRNWQNLHDFAKRFNMIFIPSVGPGYVDTRIRPWNGENTRNRLKGTYYKDSWKTALKFQPRVISITSFNEWHEGTQIERAIP 2626
            K + +  ET  K ++  ++  +P    +++L E      Y +H FYY WYGNP+FD +YIHWNH +L HW+P++AK+YP+G H PPDDIGS F+P+LG+YSSRDP VI +HM+Q+ SA+IGV+ +S+YPP   D+NG+   N+ P +L  A+ Y +KV FHIEPY NR+   +  ++ +IID Y ++PAF+RY    G +LPM Y+YDSY TKP++W+ +L  +G  S+R + YD   I L V+E    ++ + GFDG YTYFA NGFTYGSS +NW +L  F  ++N+IFIPSVGPGY+DT IRPWN +NTRNR+ G YY+     AL+ +P +ISITSFNEWHEGTQIE+A+P
Sbjct:   63 KSDRINSETNTKNLKSVEITMKPSKASELNLDELPPLNNY-LHVFYYSWYGNPQFDGKYIHWNHPVLEHWDPRIAKNYPQGRHNPPDDIGSSFYPELGSYSSRDPSVIETHMRQMRSASIGVLALSWYPPDVNDENGEPTDNLVPTILDKAHKYNLKVTFHIEPYSNRDDQNMYKNVKYIIDKYGNHPAFYRYKTKTGNALPMFYVYDSYITKPEKWANLLTTSGSRSIRNSPYDGLFIALLVEEKHKYDILQSGFDGIYTYFATNGFTYGSSHQNWASLKLFCDKYNLIFIPSVGPGYIDTSIRPWNTQNTRNRINGKYYEIGLSAALQTRPSLISITSFNEWHEGTQIEKAVP 416
The following BLAST results are available for this feature:
BLAST of TCONS_00015475 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MANEA5.372e-13250.65Glycoprotein endo-alpha-1,2-mannosidase OS=Homo sa... [more]
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