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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015481 ID=TCONS_00015481|Name=TCONS_00015481|organism=Clytia hemisphaerica|type=transcript|length=1278bp
acggacggacggacatcggttaatttataggacctccgaggtaggtccaa
aaagagtgcacacttatcgtgaatagactttagagtAGTTACTCAGGTTG
CCGTATTTCCTCTATTTAGGCCCGCCCCCAAACAGTGACCGTCGTGGTGT
AAGAGCTGAAAAAATCGAACGAGCGTTATCATAAATTGACTTTCAATTCT
ATCCTATTGAACGGTTGTAAGAAGTTTAAGATATCGGAATAGATTCTTTT
ATTAGAATTATAGCAAAAACCGAAACTTTTGCAGTAAATTTTACGGATAT
CTGTTGAAGAGCACCTCGGCGCTAATTTGAGGAAATACAGTAatctaatt
cgaaaaaaaaaaagccaAGAATTCGTCGGAGGCAATACTTTGTAACGCTG
TTTGTTCTCGAAGTGAGCATTCATGGGGTCTggtatataatttttaaaaa
gaagaaaaatgggTGCATACATTATaaacaaaaagtataaaaagaaaatc
aaaaattcctaCGAAAATTTGTAcacgattttgaaaaaaagaaacaaaaa
cagcAACTTAAGATAGAGGATAAGAGATTAAAGATTTCCCTTTTAAATTT
TACACCGTTCAACTCTCATCACCCGATTCAATGAAACATACAAAACAAAG
AGAACCTCTACGGAGGACACCCAGTCAACTTTAGAACACCATGGGAGAGT
GCATCCGGTTCATGGTATAGGGGTGGTTGGTGGATAATTGTTGAATTGCA
CTCCCGTTTGCGCCCCTCCACTGTGCACTGAATGCGCGTCGCTCGACGAT
GGTGAAGTATTAGAGTTATTTAGAAAGTGAAACATCGAGCTTGTATTGCT
AAATTCATTTTGCCTCGCCCAGTCAATCGTTCCATTATGCTGCGCCATAT
AATTGTTGTCTATTAAGTGAGGCATGAAGGGTTGATGTTGAGTGTTTATA
GAATGATGGNGTTGTCTATTAAGTGAGGCATGAAGGGTTGATGTTGAGTG
TTTATAGAATGATGGTGGTGAAACATGTAATCTGAGGGCGGTGCAAGCGC
AACATTTGGCCCAACCATCTGTTCGTAAGTTTGGGCGCGCACCATGTTAT
GTCCACCACCGCCACCATGTTGTGCTATGTTGGGTGAAAATAGACTAGGT
GATTGTTGTTGTAAGTTTTCAGGGAGACGGTTTTGCTGCATGGGCGTTTG
GGCGTTCGTTTGATTGAAAGAGACTGGCGGAAGAAAAGAGAAGCGAGGTT
GCGGTGGAGGTTGTGTACTCATCATAGT Run BLAST on NCBI protein sequence of TCONS_00015481-protein >TCONS_00015481-protein ID=TCONS_00015481-protein|Name=TCONS_00015481-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
TMMSTQPPPQPRFSFLPPVSFNQTNAQTPMQQNRLPENLQQQSPSLFSPN
IAQHGGGGGHNMVRAQTYEQMVGPNVALAPPSDYMFHHHHSINTQHQPFM
PHLIDNXIIL Run BLAST on NCBI transcript from alignment at sc0000211:1..1278 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015481 ID=TCONS_00015481|Name=TCONS_00015481|organism=Clytia hemisphaerica|type=transcript|length=1278bp|location=Sequence derived from alignment at sc0000211:1..1278 (Clytia hemisphaerica)
ACTATGATGAGTACACAACCTCCACCGCAACCTCGCTTCTCTTTTCTTCC
GCCAGTCTCTTTCAATCAAACGAACGCCCAAACGCCCATGCAGCAAAACC
GTCTCCCTGAAAACTTACAACAACAATCACCTAGTCTATTTTCACCCAAC
ATAGCACAACATGGTGGCGGTGGTGGACATAACATGGTGCGCGCCCAAAC
TTACGAACAGATGGTTGGGCCAAATGTTGCGCTTGCACCGCCCTCAGATT
ACATGTTTCACCACCATCATTCTATAAACACTCAACATCAACCCTTCATG
CCTCACTTAATAGACAACNCCATCATTCTATAAACACTCAACATCAACCC
TTCATGCCTCACTTAATAGACAACAATTATATGGCGCAGCATAATGGAAC
GATTGACTGGGCGAGGCAAAATGAATTTAGCAATACAAGCTCGATGTTTC
ACTTTCTAAATAACTCTAATACTTCACCATCGTCGAGCGACGCGCATTCA
GTGCACAGTGGAGGGGCGCAAACGGGAGTGCAATTCAACAATTATCCACC
AACCACCCCTATACCATGAACCGGATGCACTCTCCCATGGTGTTCTAAAG
TTGACTGGGTGTCCTCCGTAGAGGTTCTCTTTGTTTTGTATGTTTCATTG
AATCGGGTGATGAGAGTTGAACGGTGTAAAATTTAAAAGGGAAATCTTTA
ATCTCTTATCCTCTATCTTAAGTTgctgtttttgtttctttttttcaaaa
tcgtgTACAAATTTTCGtaggaatttttgattttctttttatactttttg
tttATAATGTATGCAcccatttttcttctttttaaaaattatataccAGA
CCCCATGAATGCTCACTTCGAGAACAAACAGCGTTACAAAGTATTGCCTC
CGACGAATTCTtggctttttttttttcgaattagatTACTGTATTTCCTC
AAATTAGCGCCGAGGTGCTCTTCAACAGATATCCGTAAAATTTACTGCAA
AAGTTTCGGTTTTTGCTATAATTCTAATAAAAGAATCTATTCCGATATCT
TAAACTTCTTACAACCGTTCAATAGGATAGAATTGAAAGTCAATTTATGA
TAACGCTCGTTCGATTTTTTCAGCTCTTACACCACGACGGTCACTGTTTG
GGGGCGGGCCTAAATAGAGGAAATACGGCAACCTGAGTAACTactctaaa
gtctattcacgataagtgtgcactctttttggacctacctcggaggtcct
ataaattaaccgatgtccgtccgtccgt Coding sequence (CDS) from alignment at sc0000211:1..1278 >TCONS_00015481 ID=TCONS_00015481|Name=TCONS_00015481|organism=Clytia hemisphaerica|type=CDS|length=333bp|location=Sequence derived from alignment at sc0000211:1..1278 (Clytia hemisphaerica)
ACTATGATGAGTACACAACCTCCACCGCAACCTCGCTTCTCTTTTCTTCC
GCCAGTCTCTTTCAATCAAACGAACGCCCAAACGCCCATGCAGCAAAACC
GTCTCCCTGAAAACTTACAACAACAATCACCTAGTCTATTTTCACCCAAC
ATAGCACAACATGGTGGCGGTGGTGGACATAACATGGTGCGCGCCCAAAC
TTACGAACAGATGGTTGGGCCAAATGTTGCGCTTGCACCGCCCTCAGATT
ACATGTTTCACCACCATCATTCTATAAACACTCAACATCAACCCTTCATG
CCTCACTTAATAGACAACNCCATCATTCTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015481-exon-sc0000211-1491911889:1..1278 | TCONS_00015481-exon-sc0000211-1491911889:1..1278 | Clytia hemisphaerica | exon |
| TCONS_00015481-exon-sc0000211-1510915933:1..1278 | TCONS_00015481-exon-sc0000211-1510915933:1..1278 | Clytia hemisphaerica | exon |
| TCONS_00015481-exon-sc0000211-1575043694:1..1278 | TCONS_00015481-exon-sc0000211-1575043694:1..1278 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000211 | supercontig | sc0000211:1..1278 . |
Blast
The following BLAST results are available for this feature:
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