TCONS_00015547 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015547
Unique NameTCONS_00015547
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1478

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015547 ID=TCONS_00015547|Name=TCONS_00015547|organism=Clytia hemisphaerica|type=transcript|length=1478bp
AGTCAGTCCATCAAAACAATATACCTATATGGCCAACTTTAGCATCTACA
ACATTGGGCGATACAAATTATACTTTAAATACCAACAAAATGAATTTAAC
TTGGCTCGAAACTCCGACGTAAGCCGCTCTATCACAACGGTGGGATCACG
TCAACCAGCACCTATAGGGCTCTACGTGAAAAGAGATGGAGACACGGCAA
GATTTTATTTCGTCTTGGATATTATGCCGACTCGTGAAGGAGCTCATTTC
AAAATTGTCATCGGCAATAATTTCGATTACTACCTTCCACgaagtttcaa
aatcaattACTTCAATTACGTGATCAATTCACCAGTCAACACTCGTCTCT
CAGTCGCCAAATCCACTCTTTCTTACGAATTCGTTACCAACCAACAACGT
CAAGATACACATATCTACATGGTGTACGCGAAACCAGAGCCTTCATTCAC
TGTTAATGGAGATTTCACGCAAAACGGTGCAAAGAAACCTTTGTTTGTCA
ATGGAAAACCTCAAGAGTTGATTGGTGTGACCGAGGATTTACTCTCCAAA
AATATTGATGTTCATTTATCCGGATTTAAACTTGGTCGTAAACGATTCTG
GGGCATCGTAGAAAACAAGATGGATTCTGAAATCATCTTACGTTGGGAAG
TCGATCAAACAATCCAACTTCAGCTAGAAACACCAGACAAAGAGAAATTC
TTCCCTGCTGAATCCACACAAAATACAATCTACTCATTCTGGAATTACCA
AGACATGAAGTATTTCTATTTAACAGCCTTTGACAAACGGACAGGAGAAG
CTCTAAGTATAAACGCAAGTCCGAAGTATCAATCACAATTGACAGATCAG
AGACCTGATCTGATACCAAGACTTGTCATCACTCCCCCTACTACTTACTA
TTATTTGGCATACAGTGTGACAAATGAGTTACCAGACACCGTTTATCTCC
AATGGATAATCAACCATGACAAGTTGCACTCGACATCCCCAAAACAGTAT
GAAATAAAACCCAACACTAAAGATCAAGTCATCAAAATAGTTCTCACAAG
TGAACGTCGTCTGACGGGTGAAGAATTGAAACAAGCTACTAGTCTAGTTA
CAGGAACAAGTTTTGATGGAGAAACACCCGTGTTTGTAAATGATGGAGAG
GTAGCTCGCGTACCGATCACTTCTCTCGGGGCACAACCATCCGAAATTCG
GTTTACCCAACATGtttctcaATACTACATCACAGTGGACATCGAGAACA
CTTTATCATCTCCAGTCACATTGAATCTCAAATCCAATATTGCTGACCTG
GACTACCAACAAAAACCATCCAAAATGTGGTACACCATCAGCCCATCTAT
TGATAGCCAAGTACTCAGTTTCACATTCTCAACTGCTTCAGAAAATGGCT
TCAAAGACGTCATCTCAAATTTTATTAGATTCCAAGGAGTTACAGATAAA
GGGGAAGTTCTGTTAAATAACGAAAAAT
Run BLAST on NCBI

protein sequence of TCONS_00015547-protein

>TCONS_00015547-protein ID=TCONS_00015547-protein|Name=TCONS_00015547-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
VSPSKQYTYMANFSIYNIGRYKLYFKYQQNEFNLARNSDVSRSITTVGSR
QPAPIGLYVKRDGDTARFYFVLDIMPTREGAHFKIVIGNNFDYYLPRSFK
INYFNYVINSPVNTRLSVAKSTLSYEFVTNQQRQDTHIYMVYAKPEPSFT
VNGDFTQNGAKKPLFVNGKPQELIGVTEDLLSKNIDVHLSGFKLGRKRFW
GIVENKMDSEIILRWEVDQTIQLQLETPDKEKFFPAESTQNTIYSFWNYQ
DMKYFYLTAFDKRTGEALSINASPKYQSQLTDQRPDLIPRLVITPPTTYY
YLAYSVTNELPDTVYLQWIINHDKLHSTSPKQYEIKPNTKDQVIKIVLTS
ERRLTGEELKQATSLVTGTSFDGETPVFVNDGEVARVPITSLGAQPSEIR
FTQHVSQYYITVDIENTLSSPVTLNLKSNIADLDYQQKPSKMWYTISPSI
DSQVLSFTFSTASENGFKDVISNFIRFQGVTDKGEVLLNNEK
Run BLAST on NCBI

transcript from alignment at sc0000212:339835..343375-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015547 ID=TCONS_00015547|Name=TCONS_00015547|organism=Clytia hemisphaerica|type=transcript|length=3541bp|location=Sequence derived from alignment at sc0000212:339835..343375- (Clytia hemisphaerica)
AGTCAGTCCATCAAAACAATATACCTATATGGCCAACTTTAGCATCTACA ACATTGGGCGATACAAATTATACTTTAAATACCAACAAAATGAATTTAAC TTGGCTCGAAACTCCGACGTAAGCCGCTCTATCACAACGGTGGGATCACG TCAACCAGCACCTATAGGGCTCTACGTGAAAAGAGATGGAGACACGGCAA GATTTTATTTCGTCTTGGATATTATGCCGACTCGTGAAGGAGCTCATTTC AAAATTGTCATCGGCAATAATTGTAAGTGCGACTGCGATTTAAATCATTA TTAATCAATGACAGCGAATAAAATTAATTCATTTCGAATAGTAATGAACA TTAATTTCATAGATTTCACAATCAGGGAGATCTTTGAGTATGGATTTACC AATAGTCATGATCTTTAACTCGATCAGATCAATTTCTGGAGAGCCTAAAT TTTGAGCAATCTTGGTCTAATTAAACTGCTCAAGTTGCTCGGTATTAATC TTTTTAGTCATTGTCGACAATCTGTAAAAAATGTTCAATTTATTAATCTT TTCGGGTAACCTCGCCGACACGCCATTGCTCTAACGTGTCGCAAGAAAAA GGGTCACAATATCTAGCGCTATACTTTCCGTAACTGTAGCGTAGCTGTCC CTTGATAAAGCTTCTAAAAACCGTTCTACTTCGATCGTATGACTTCAATT GACTAAATTTTTCAATTTTCGTTTTCCAGTCGATTACTACCTTCCACGAA GTTTCAAAATCAATTACTTCAATTACGTGATCAATTCACCAGTCAACACT CGTCTCTCAGTCGCCAAATCCACTCTTTCTTACGAATTCGTTACCAACCA ACAACGTCAAGATACACATATCTACATGGTGTACGCGAAACCAGAGCCTT CATTCACTGTTAATGGAGATTTCACGCAAAACGGTGCAAAGAAACCTTTG TTTGTCAATGGAAAACCTCAAGAGTTGATTGGTGTGACCGAGGATTTACT CTCCAAAAATATTGATGTTCATTTATCCGGATTTAAACGTATGAAAAAGT TTTTTCATTGGTTCTCATGAGGGAATTTTACGATGACGGGAATATTTTTC TATTTGTCCATGCCAAAATTTTCTCAAATTTTCTTCTTTTTTCCCAAATT TTCCAAAAATAGGCACCCTACAAGGGACTGATTTTTCTATTTTGGTGTTT TTGCGACCCTACCTGGGACTCGTGGAGGTTAAAAANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCACGACCTGTAGGTAA TCTTTTGGTTTGTACCTGTGGAGATAAAATGAAGCCAGTAAAGATGGGAA ACTGCCATTTTTCATAAGTGGGTTTTCTTTTTTTTTTTAATTTCAACAGT ATCCAGTGCGAATCTCAAAATCTTAATTATCTTTGGCAGCGAGTATGAAC TTCTTGTCCAGTTTTTTATGAGAGGGAATTTCTGGCCATTTTTCTCAACT GATTTTTGGCTATTCTATAGGGGGGTACCTCCAGGATACGTGTCTGTGAC ACGAGGGTTATGGAAACGCAATAGACGATATCGGCTTAACGTGAAAACTC AGATTTGATCCCCGAATATTGCCCACAATGCTTTGTGCGGAAAAAATTTC ACCGTAAACTTTTTTCCGCGCAAAGCATTGTGGGCAATATTCGGGGATAA ATCTGAGTTTTCACGTTAAGCCGATATCGTCTATTCTTTTAGAACATAAG AAAGGAAACTCAAATAAAAAATGTAACGATATTTATCAAAGATGTTTAGG ATAATGACGGCTGATTGAAAGGAATTCTGAGGCCATCATGATATTGACGA ATATCATGATTATTGTGGCTTCCTACATAAGAACAACTTAGGAATACAAA CTGTTTTCTCCAAGCATTTGTTTAATGTATTTACTTCTTAATACAGTTGG TCGTAAACGATTCTGGGGCATCGTAGAAAACAAGATGGATTCTGAAATCA TCTTACGTTGGGAAGTCGATCAAACAATCCAACTTCAGCTAGAAACACCA GACAAAGAGAAATTCTTCCCTGCTGAATCCACACAAAATACAATCTACTC ATTCTGGAATTACCAAGACATGAAGTATTTCTATTTAACAGCCTTTGACA AACGGACAGGAGAAGCTCTAAGTATAAACGCAAGTCCGAAGTATCAATCA CAATTGACAGATCAGAGACCTGATCTGATACCAAGACTTGTCATCACTCC CCCTAGTAAGTGTTTTAACGTTCAAATTTTTTCTTTGAATTTATGCGAAA CTAGGAGGTGCTGGTGTACTAAGAAATTACGATTTCGACGGTAAAAATAT GAAAATCTAAGACTATAGTCATATACAGATGCCTCATCGACATTAAATTT CAACCAAAAACCACGTTACTTTATTGATTTTCCTTACAAATCTGCAGTCG ATGTGCATCAGTTGACCTGTGTTCTCTTATACTGTAATTGAAATTTAAAA CATCGTTTCTTCTTTCTAGCTACTTACTATTATTTGGCATACAGTGTGAC AAATGAGTTACCAGACACCGTTTATCTCCAATGGATAATCAACCATGACA AGTTGCACTCGACATCCCCAAAACAGTATGAAATAAAACCCAACACTAAA GATCAAGTCATCAAAATAGTTCTCACAAGTGAACGTCGTCTGACGGGTGA AGAATTGAAACAAGCTACTAGTCTAGTTACAGGAACAAGTTTTGATGGAG AAACACCCGTGTTTGTAAATGATGGAGAGGTAGCTCGCGTACCGATCACT TCTCTCGGGGCACAACCATCCGAAATTCGGTTTACCCAACATGGTAAGCT TACTTTTGATTTTGATTTCCGGTCTATCAATTATGAAAAATATAATTAAT TTATACTTAATAATATAGGTCAAGAAAGAAGGCCTTCAGTTTTATATATG AGCATCCGTTAAGATTATCCCTGAGCAGATCGTTTAGGTCATGACGTCAA TATAAATTAAGGTTATCCTAGATGGTTCGGCATCAATATGCAAGACTTGT TTATTAAGAACAACATAAGGTAAAAACTTGTTCTTGTAAGATTATCCATT CTACATAATCTTTCATTTTATTTTCAGTTTCTCAATACTACATCACAGTG GACATCGAGAACACTTTATCATCTCCAGTCACATTGAATCTCAAATCCAA TATTGCTGACCTGGACTACCAACAAAAACCATCCAAAATGTGGTACACCA TCAGCCCATCTATTGATAGCCAAGTACTCAGTTTCACATTCTCAACTGCT TCAGAAAATGGCTTCAAAGACGTCATCTCAAATTTTATTAGATTCCAAGG AGTTACAGATAAAGGGGAAGTTCTGTTAAATAACGAAAAAT

Coding sequence (CDS) from alignment at sc0000212:339835..343375-

>TCONS_00015547 ID=TCONS_00015547|Name=TCONS_00015547|organism=Clytia hemisphaerica|type=CDS|length=7380bp|location=Sequence derived from alignment at sc0000212:339835..343375- (Clytia hemisphaerica)
TTTCTCAATACTACATCACAGTGGACATCGAGAACACTTTATCATCTCCA
GTCACATTGAATCTCAAATCCAATATTGCTGACCTGGACTACCAACAAAA
ACCATCCAAAATGTGGTACACCATCAGCCCATCTATTGATAGCCAAGTAC
TCAGTTTCACATTCTCAACTGCTTCAGAAAATGGCTTCAAAGACGTCATC
TCAAATTTTATTAGATTCCAAGGAGTTACAGATAAAGGGGAAGTTCTGTT
AAATAACGAAAAACTACTTACTATTATTTGGCATACAGTGTGACAAATGA
GTTACCAGACACCGTTTATCTCCAATGGATAATCAACCATGACAAGTTGC
ACTCGACATCCCCAAAACAGTATGAAATAAAACCCAACACTAAAGATCAA
GTCATCAAAATAGTTCTCACAAGTGAACGTCGTCTGACGGGTGAAGAATT
GAAACAAGCTACTAGTCTAGTTACAGGAACAAGTTTTGATGGAGAAACAC
CCGTGTTTGTAAATGATGGAGAGGTAGCTCGCGTACCGATCACTTCTCTC
GGGGCACAACCATCCGAAATTCGGTTTACCCAACATGTTGGTCGTAAACG
ATTCTGGGGCATCGTAGAAAACAAGATGGATTCTGAAATCATCTTACGTT
GGGAAGTCGATCAAACAATCCAACTTCAGCTAGAAACACCAGACAAAGAG
AAATTCTTCCCTGCTGAATCCACACAAAATACAATCTACTCATTCTGGAA
TTACCAAGACATGAAGTATTTCTATTTAACAGCCTTTGACAAACGGACAG
GAGAAGCTCTAAGTATAAACGCAAGTCCGAAGTATCAATCACAATTGACA
GATCAGAGACCTGATCTGATACCAAGACTTGTCATCACTCCCCCTATCGA
TTACTACCTTCCACGAAGTTTCAAAATCAATTACTTCAATTACGTGATCA
ATTCACCAGTCAACACTCGTCTCTCAGTCGCCAAATCCACTCTTTCTTAC
GAATTCGTTACCAACCAACAACGTCAAGATACACATATCTACATGGTGTA
CGCGAAACCAGAGCCTTCATTCACTGTTAATGGAGATTTCACGCAAAACG
GTGCAAAGAAACCTTTGTTTGTCAATGGAAAACCTCAAGAGTTGATTGGT
GTGACCGAGGATTTACTCTCCAAAAATATTGATGTTCATTTATCCGGATT
TAAACGTCAGTCCATCAAAACAATATACCTATATGGCCAACTTTAGCATC
TACAACATTGGGCGATACAAATTATACTTTAAATACCAACAAAATGAATT
TAACTTGGCTCGAAACTCCGACGTAAGCCGCTCTATCACAACGGTGGGAT
CACGTCAACCAGCACCTATAGGGCTCTACGTGAAAAGAGATGGAGACACG
GCAAGATTTTATTTCGTCTTGGATATTATGCCGACTCGTGAAGGAGCTCA
TTTCAAAATTGTCATCGGCAATAATTTTTCTCAATACTACATCACAGTGG
ACATCGAGAACACTTTATCATCTCCAGTCACATTGAATCTCAAATCCAAT
ATTGCTGACCTGGACTACCAACAAAAACCATCCAAAATGTGGTACACCAT
CAGCCCATCTATTGATAGCCAAGTACTCAGTTTCACATTCTCAACTGCTT
CAGAAAATGGCTTCAAAGACGTCATCTCAAATTTTATTAGATTCCAAGGA
GTTACAGATAAAGGGGAAGTTCTGTTAAATAACGAAAAACTACTTACTAT
TATTTGGCATACAGTGTGACAAATGAGTTACCAGACACCGTTTATCTCCA
ATGGATAATCAACCATGACAAGTTGCACTCGACATCCCCAAAACAGTATG
AAATAAAACCCAACACTAAAGATCAAGTCATCAAAATAGTTCTCACAAGT
GAACGTCGTCTGACGGGTGAAGAATTGAAACAAGCTACTAGTCTAGTTAC
AGGAACAAGTTTTGATGGAGAAACACCCGTGTTTGTAAATGATGGAGAGG
TAGCTCGCGTACCGATCACTTCTCTCGGGGCACAACCATCCGAAATTCGG
TTTACCCAACATGTTGGTCGTAAACGATTCTGGGGCATCGTAGAAAACAA
GATGGATTCTGAAATCATCTTACGTTGGGAAGTCGATCAAACAATCCAAC
TTCAGCTAGAAACACCAGACAAAGAGAAATTCTTCCCTGCTGAATCCACA
CAAAATACAATCTACTCATTCTGGAATTACCAAGACATGAAGTATTTCTA
TTTAACAGCCTTTGACAAACGGACAGGAGAAGCTCTAAGTATAAACGCAA
GTCCGAAGTATCAATCACAATTGACAGATCAGAGACCTGATCTGATACCA
AGACTTGTCATCACTCCCCCTATCGATTACTACCTTCCACGAAGTTTCAA
AATCAATTACTTCAATTACGTGATCAATTCACCAGTCAACACTCGTCTCT
CAGTCGCCAAATCCACTCTTTCTTACGAATTCGTTACCAACCAACAACGT
CAAGATACACATATCTACATGGTGTACGCGAAACCAGAGCCTTCATTCAC
TGTTAATGGAGATTTCACGCAAAACGGTGCAAAGAAACCTTTGTTTGTCA
ATGGAAAACCTCAAGAGTTGATTGGTGTGACCGAGGATTTACTCTCCAAA
AATATTGATGTTCATTTATCCGGATTTAAACGTCAGTCCATCAAAACAAT
ATACCTATATGGCCAACTTTAGCATCTACAACATTGGGCGATACAAATTA
TACTTTAAATACCAACAAAATGAATTTAACTTGGCTCGAAACTCCGACGT
AAGCCGCTCTATCACAACGGTGGGATCACGTCAACCAGCACCTATAGGGC
TCTACGTGAAAAGAGATGGAGACACGGCAAGATTTTATTTCGTCTTGGAT
ATTATGCCGACTCGTGAAGGAGCTCATTTCAAAATTGTCATCGGCAATAA
TTTTTCTCAATACTACATCACAGTGGACATCGAGAACACTTTATCATCTC
CAGTCACATTGAATCTCAAATCCAATATTGCTGACCTGGACTACCAACAA
AAACCATCCAAAATGTGGTACACCATCAGCCCATCTATTGATAGCCAAGT
ACTCAGTTTCACATTCTCAACTGCTTCAGAAAATGGCTTCAAAGACGTCA
TCTCAAATTTTATTAGATTCCAAGGAGTTACAGATAAAGGGGAAGTTCTG
TTAAATAACGAAAAACTACTTACTATTATTTGGCATACAGTGTGACAAAT
GAGTTACCAGACACCGTTTATCTCCAATGGATAATCAACCATGACAAGTT
GCACTCGACATCCCCAAAACAGTATGAAATAAAACCCAACACTAAAGATC
AAGTCATCAAAATAGTTCTCACAAGTGAACGTCGTCTGACGGGTGAAGAA
TTGAAACAAGCTACTAGTCTAGTTACAGGAACAAGTTTTGATGGAGAAAC
ACCCGTGTTTGTAAATGATGGAGAGGTAGCTCGCGTACCGATCACTTCTC
TCGGGGCACAACCATCCGAAATTCGGTTTACCCAACATGTTGGTCGTAAA
CGATTCTGGGGCATCGTAGAAAACAAGATGGATTCTGAAATCATCTTACG
TTGGGAAGTCGATCAAACAATCCAACTTCAGCTAGAAACACCAGACAAAG
AGAAATTCTTCCCTGCTGAATCCACACAAAATACAATCTACTCATTCTGG
AATTACCAAGACATGAAGTATTTCTATTTAACAGCCTTTGACAAACGGAC
AGGAGAAGCTCTAAGTATAAACGCAAGTCCGAAGTATCAATCACAATTGA
CAGATCAGAGACCTGATCTGATACCAAGACTTGTCATCACTCCCCCTATC
GATTACTACCTTCCACGAAGTTTCAAAATCAATTACTTCAATTACGTGAT
CAATTCACCAGTCAACACTCGTCTCTCAGTCGCCAAATCCACTCTTTCTT
ACGAATTCGTTACCAACCAACAACGTCAAGATACACATATCTACATGGTG
TACGCGAAACCAGAGCCTTCATTCACTGTTAATGGAGATTTCACGCAAAA
CGGTGCAAAGAAACCTTTGTTTGTCAATGGAAAACCTCAAGAGTTGATTG
GTGTGACCGAGGATTTACTCTCCAAAAATATTGATGTTCATTTATCCGGA
TTTAAACGTCAGTCCATCAAAACAATATACCTATATGGCCAACTTTAGCA
TCTACAACATTGGGCGATACAAATTATACTTTAAATACCAACAAAATGAA
TTTAACTTGGCTCGAAACTCCGACGTAAGCCGCTCTATCACAACGGTGGG
ATCACGTCAACCAGCACCTATAGGGCTCTACGTGAAAAGAGATGGAGACA
CGGCAAGATTTTATTTCGTCTTGGATATTATGCCGACTCGTGAAGGAGCT
CATTTCAAAATTGTCATCGGCAATAATTTTTCTCAATACTACATCACAGT
GGACATCGAGAACACTTTATCATCTCCAGTCACATTGAATCTCAAATCCA
ATATTGCTGACCTGGACTACCAACAAAAACCATCCAAAATGTGGTACACC
ATCAGCCCATCTATTGATAGCCAAGTACTCAGTTTCACATTCTCAACTGC
TTCAGAAAATGGCTTCAAAGACGTCATCTCAAATTTTATTAGATTCCAAG
GAGTTACAGATAAAGGGGAAGTTCTGTTAAATAACGAAAAACTACTTACT
ATTATTTGGCATACAGTGTGACAAATGAGTTACCAGACACCGTTTATCTC
CAATGGATAATCAACCATGACAAGTTGCACTCGACATCCCCAAAACAGTA
TGAAATAAAACCCAACACTAAAGATCAAGTCATCAAAATAGTTCTCACAA
GTGAACGTCGTCTGACGGGTGAAGAATTGAAACAAGCTACTAGTCTAGTT
ACAGGAACAAGTTTTGATGGAGAAACACCCGTGTTTGTAAATGATGGAGA
GGTAGCTCGCGTACCGATCACTTCTCTCGGGGCACAACCATCCGAAATTC
GGTTTACCCAACATGTTGGTCGTAAACGATTCTGGGGCATCGTAGAAAAC
AAGATGGATTCTGAAATCATCTTACGTTGGGAAGTCGATCAAACAATCCA
ACTTCAGCTAGAAACACCAGACAAAGAGAAATTCTTCCCTGCTGAATCCA
CACAAAATACAATCTACTCATTCTGGAATTACCAAGACATGAAGTATTTC
TATTTAACAGCCTTTGACAAACGGACAGGAGAAGCTCTAAGTATAAACGC
AAGTCCGAAGTATCAATCACAATTGACAGATCAGAGACCTGATCTGATAC
CAAGACTTGTCATCACTCCCCCTATCGATTACTACCTTCCACGAAGTTTC
AAAATCAATTACTTCAATTACGTGATCAATTCACCAGTCAACACTCGTCT
CTCAGTCGCCAAATCCACTCTTTCTTACGAATTCGTTACCAACCAACAAC
GTCAAGATACACATATCTACATGGTGTACGCGAAACCAGAGCCTTCATTC
ACTGTTAATGGAGATTTCACGCAAAACGGTGCAAAGAAACCTTTGTTTGT
CAATGGAAAACCTCAAGAGTTGATTGGTGTGACCGAGGATTTACTCTCCA
AAAATATTGATGTTCATTTATCCGGATTTAAACGTCAGTCCATCAAAACA
ATATACCTATATGGCCAACTTTAGCATCTACAACATTGGGCGATACAAAT
TATACTTTAAATACCAACAAAATGAATTTAACTTGGCTCGAAACTCCGAC
GTAAGCCGCTCTATCACAACGGTGGGATCACGTCAACCAGCACCTATAGG
GCTCTACGTGAAAAGAGATGGAGACACGGCAAGATTTTATTTCGTCTTGG
ATATTATGCCGACTCGTGAAGGAGCTCATTTCAAAATTGTCATCGGCAAT
AATTTTTCTCAATACTACATCACAGTGGACATCGAGAACACTTTATCATC
TCCAGTCACATTGAATCTCAAATCCAATATTGCTGACCTGGACTACCAAC
AAAAACCATCCAAAATGTGGTACACCATCAGCCCATCTATTGATAGCCAA
GTACTCAGTTTCACATTCTCAACTGCTTCAGAAAATGGCTTCAAAGACGT
CATCTCAAATTTTATTAGATTCCAAGGAGTTACAGATAAAGGGGAAGTTC
TGTTAAATAACGAAAAACTACTTACTATTATTTGGCATACAGTGTGACAA
ATGAGTTACCAGACACCGTTTATCTCCAATGGATAATCAACCATGACAAG
TTGCACTCGACATCCCCAAAACAGTATGAAATAAAACCCAACACTAAAGA
TCAAGTCATCAAAATAGTTCTCACAAGTGAACGTCGTCTGACGGGTGAAG
AATTGAAACAAGCTACTAGTCTAGTTACAGGAACAAGTTTTGATGGAGAA
ACACCCGTGTTTGTAAATGATGGAGAGGTAGCTCGCGTACCGATCACTTC
TCTCGGGGCACAACCATCCGAAATTCGGTTTACCCAACATGTTGGTCGTA
AACGATTCTGGGGCATCGTAGAAAACAAGATGGATTCTGAAATCATCTTA
CGTTGGGAAGTCGATCAAACAATCCAACTTCAGCTAGAAACACCAGACAA
AGAGAAATTCTTCCCTGCTGAATCCACACAAAATACAATCTACTCATTCT
GGAATTACCAAGACATGAAGTATTTCTATTTAACAGCCTTTGACAAACGG
ACAGGAGAAGCTCTAAGTATAAACGCAAGTCCGAAGTATCAATCACAATT
GACAGATCAGAGACCTGATCTGATACCAAGACTTGTCATCACTCCCCCTA
TCGATTACTACCTTCCACGAAGTTTCAAAATCAATTACTTCAATTACGTG
ATCAATTCACCAGTCAACACTCGTCTCTCAGTCGCCAAATCCACTCTTTC
TTACGAATTCGTTACCAACCAACAACGTCAAGATACACATATCTACATGG
TGTACGCGAAACCAGAGCCTTCATTCACTGTTAATGGAGATTTCACGCAA
AACGGTGCAAAGAAACCTTTGTTTGTCAATGGAAAACCTCAAGAGTTGAT
TGGTGTGACCGAGGATTTACTCTCCAAAAATATTGATGTTCATTTATCCG
GATTTAAACGTCAGTCCATCAAAACAATATACCTATATGGCCAACTTTAG
CATCTACAACATTGGGCGATACAAATTATACTTTAAATACCAACAAAATG
AATTTAACTTGGCTCGAAACTCCGACGTAAGCCGCTCTATCACAACGGTG
GGATCACGTCAACCAGCACCTATAGGGCTCTACGTGAAAAGAGATGGAGA
CACGGCAAGATTTTATTTCGTCTTGGATATTATGCCGACTCGTGAAGGAG
CTCATTTCAAAATTGTCATCGGCAATAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008674XLOC_008674Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015547-exon-sc0000212-1575043694:343104..343375TCONS_00015547-exon-sc0000212-1575043694:343104..343375Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1575043694:342338..342646TCONS_00015547-exon-sc0000212-1575043694:342338..342646Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1575043694:340971..341279TCONS_00015547-exon-sc0000212-1575043694:340971..341279Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1575043694:340383..340706TCONS_00015547-exon-sc0000212-1575043694:340383..340706Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1575043694:339835..340098TCONS_00015547-exon-sc0000212-1575043694:339835..340098Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1510915933:343104..343375TCONS_00015547-exon-sc0000212-1510915933:343104..343375Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1510915933:342338..342646TCONS_00015547-exon-sc0000212-1510915933:342338..342646Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1510915933:340971..341279TCONS_00015547-exon-sc0000212-1510915933:340971..341279Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1510915933:340383..340706TCONS_00015547-exon-sc0000212-1510915933:340383..340706Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1510915933:339835..340098TCONS_00015547-exon-sc0000212-1510915933:339835..340098Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1491911889:343104..343375TCONS_00015547-exon-sc0000212-1491911889:343104..343375Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1491911889:342338..342646TCONS_00015547-exon-sc0000212-1491911889:342338..342646Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1491911889:340971..341279TCONS_00015547-exon-sc0000212-1491911889:340971..341279Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1491911889:340383..340706TCONS_00015547-exon-sc0000212-1491911889:340383..340706Clytia hemisphaericaexon
TCONS_00015547-exon-sc0000212-1491911889:339835..340098TCONS_00015547-exon-sc0000212-1491911889:339835..340098Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015547-proteinTCONS_00015547-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:339835..343375 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.111829 0.0888453 0 0.0929073 0.551229 0.391985 0.462677 0.661074 0.176095 0.0940668 0.0589001 0.102294 0.258392 0.129484 0.0826518 0.108179 0.276628 0.131276 0.121238 0.264151 1.21473 0.606182 0.0776244 0.228791 0.963301 0.501879 0.22363 0.484821 0.114366 0.267967
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015547 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top