TCONS_00015572 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015572
Unique NameTCONS_00015572
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length418

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015572 ID=TCONS_00015572|Name=TCONS_00015572|organism=Clytia hemisphaerica|type=transcript|length=418bp
tgctggagttaGTGGAGTCTTTAATTGTATTCAACTTGACATTGCGTTCT
TGAAGGGGCCATCAACAAGCCATTTTTAATTCTTAATGGCATTTGGCTGT
TAACGGGTGGAGCTTTCATACCCCATATGCTGCTAAGAAGATTTACAAAg
gtcaaaaatgtttttttttctataagcatgtATTTTTGATATccaaacaa
tggctctattgtttaatACAATGCAAACCTGATATAGGGGTACAGCAGGT
GGGAAAAACTGAGTGACAAGTGCTAAATAAAGACCCTAATTCTGTCTTGG
TCAAGCCTTGGTTGAGCTTTTTTAACATGGTTTTATTCGGTTTAATATTA
CAtcaagattttggaaaatttgggctTAAAACAGCCATAGTCAGTTTATT
CTATAAATATAGACTTGG
Run BLAST on NCBI

transcript from alignment at sc0000212:332091..332508

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015572 ID=TCONS_00015572|Name=TCONS_00015572|organism=Clytia hemisphaerica|type=transcript|length=418bp|location=Sequence derived from alignment at sc0000212:332091..332508 (Clytia hemisphaerica)
CCAAGTCTATATTTATAGAATAAACTGACTATGGCTGTTTTAagcccaaa
ttttccaaaatcttgaTGTAATATTAAACCGAATAAAACCATGTTAAAAA
AGCTCAACCAAGGCTTGACCAAGACAGAATTAGGGTCTTTATTTAGCACT
TGTCACTCAGTTTTTCCCACCTGCTGTACCCCTATATCAGGTTTGCATTG
TattaaacaatagagccattgtttggATATCAAAAATacatgcttataga
aaaaaaaacatttttgaccTTTGTAAATCTTCTTAGCAGCATATGGGGTA
TGAAAGCTCCACCCGTTAACAGCCAAATGCCATTAAGAATTAAAAATGGC
TTGTTGATGGCCCCTTCAAGAACGCAATGTCAAGTTGAATACAATTAAAG
ACTCCACtaactccagca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008699XLOC_008699Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015572-exon-sc0000212-1491911889:332091..332508TCONS_00015572-exon-sc0000212-1491911889:332091..332508Clytia hemisphaericaexon
TCONS_00015572-exon-sc0000212-1510915933:332091..332508TCONS_00015572-exon-sc0000212-1510915933:332091..332508Clytia hemisphaericaexon
TCONS_00015572-exon-sc0000212-1575043694:332091..332508TCONS_00015572-exon-sc0000212-1575043694:332091..332508Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:332091..332508 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.331066	1.3454	2.06841	0	0	0.21824	0.204314	0	0	0	0	0	0.117243	0.0963896	0	0	0.130612	0	0.188826	0	0.240162	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015572 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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