TCONS_00015734 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015734
Unique NameTCONS_00015734
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length348

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015734 ID=TCONS_00015734|Name=TCONS_00015734|organism=Clytia hemisphaerica|type=transcript|length=348bp
GTGAAAATATAATTACCTAGTAATTATTACATGATAGCCTGATAATAGat
aaattttcacatttttctaaGTACTTCATATAACTAATAAAATAACTTAG
CATCTACACGCCAAGCTTAAAGTATATACACAACAAACATTAGGttataa
agtttaaaaatgtcaaatagcCTAGCgattgtgtatttttttaacCTGGC
CACTGCACACTGGTATAGCAAAATCAATAGAGAAAAATTAAGTTAAGAAG
TTAATCCCGGGCTTTCGTGTGGAAAGGTCTATACCGTAACTTTGTGTAAT
GTCGACATGCATTGTCTAATTCCGTTgtagcaactatctggtctgcaa
Run BLAST on NCBI

transcript from alignment at sc0000215:249758..250105

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015734 ID=TCONS_00015734|Name=TCONS_00015734|organism=Clytia hemisphaerica|type=transcript|length=348bp|location=Sequence derived from alignment at sc0000215:249758..250105 (Clytia hemisphaerica)
ttgcagaccagatagttgctacAACGGAATTAGACAATGCATGTCGACAT
TACACAAAGTTACGGTATAGACCTTTCCACACGAAAGCCCGGGATTAACT
TCTTAACTTAATTTTTCTCTATTGATTTTGCTATACCAGTGTGCAGTGGC
CAGgttaaaaaaatacacaatcGCTAGgctatttgacatttttaaacttt
ataaCCTAATGTTTGTTGTGTATATACTTTAAGCTTGGCGTGTAGATGCT
AAGTTATTTTATTAGTTATATGAAGTACttagaaaaatgtgaaaatttat
CTATTATCAGGCTATCATGTAATAATTACTAGGTAATTATATTTTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008788XLOC_008788Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015734-exon-sc0000215-1491911889:249758..250105TCONS_00015734-exon-sc0000215-1491911889:249758..250105Clytia hemisphaericaexon
TCONS_00015734-exon-sc0000215-1510915933:249758..250105TCONS_00015734-exon-sc0000215-1510915933:249758..250105Clytia hemisphaericaexon
TCONS_00015734-exon-sc0000215-1575043694:249758..250105TCONS_00015734-exon-sc0000215-1575043694:249758..250105Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:249758..250105 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.255235	0	0	0	1.0326	0	1.31258	0	0.430163	0.79924	0.258587	0.33997	0.678995	0	0	0.622132	0	0.196388	0	0.567835	0	0	0.292647	0	2.19228	0	0.349978	0.373506	1.13316	0.577257
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015734 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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