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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015736 ID=TCONS_00015736|Name=TCONS_00015736|organism=Clytia hemisphaerica|type=transcript|length=1156bp
ctaattccttctagatcaggagatataagcccttaaagtttgaactagcg
attttttaaaaaaaacttagaaaaaaggaccctggcactcaaagggttaa
caaATATACtactaaaatttataatttaaaaatatttttcattgttgACT
TGACATAAAGAAATCAAGAATGTCATCGATATCTTGGTTTGCAAGATCAT
CTGCATCCGCACcagtactttcactttcattttcttgtGGTTGAAGTGAG
AAAATATCAGGGACAGCTTGTTGCTGTGTGACCATGGACGTTTGGGAGCC
TGGTAATTGTGGTAAATCACCAAGAATACTCGATTTTTGTGAGCGGACTG
GGGACAAGTCTTGGTCGGATGATTGGTTGTTCATTGGAATGTCTTGGTTA
GACGATTGACCAAGAGTGACATTCTGGTTTTCTATCAGAGCTGGAGATGC
AGGCTCTTGGTTGATGCTTGTGATCGATGTCTTGGATGCTTGCGTGGACA
TCTCAAGTAAAGATTTAGAATCATCAATGCTTGTATGGCTGTGTGAACGC
TCTCCTAAGCTGGATGAACTAACATTACCAAGATTATCATTTGAAGCTCT
CTTAGCCAATACTGTTGGTCCTCGCAATGGAGGTAAATCACCTAATAGTG
ATTTGCTGGAGGAAGTAAGTCGCAATGGTGGCAACTCCTTCTTGGAAGAT
TTCTtggtcttctttttctttttcttgtctTTCTTCTTTGATGATTTATC
ATTAGAATCAGAGCTGGTGTTCGAGCTGGATGAGCTGAAATAGAGATCCT
CAGAGGAAGAACCAGATACAGAATTGTCTGTTAAAGAGATATCAGATTCA
CTGGAACAAACGTCTTTGAGTAAATATTCAGAGCATGAATTCTTTGATGA
TCCAGAGTTAACTGGTTCGGTTGATCTCATACCTGGTGTGCTCTTCAAAC
TGACAGGTTTGTCCAATTGTTCAGAACCTGATTTGTGGGAGAGTTCAGAT
TCACTAGCAGAAGCGACTGATTCATCGCACATTTCACCGAGTTCTTCATC
AAGTGATTGTGCAACTCCACTCATGAAATTTTCACCCCAACGTCTTTTTG
GAATGGCAACATCTTCTTCCGCATCACTCACGTGTTTATCAAGAGGTTTG
GATCTA Run BLAST on NCBI protein sequence of TCONS_00015736-protein >TCONS_00015736-protein ID=TCONS_00015736-protein|Name=TCONS_00015736-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
RSKPLDKHVSDAEEDVAIPKRRWGENFMSGVAQSLDEELGEMCDESVASA
SESELSHKSGSEQLDKPVSLKSTPGMRSTEPVNSGSSKNSCSEYLLKDVC
SSESDISLTDNSVSGSSSEDLYFSSSSSNTSSDSNDKSSKKKDKKKKKKT
KKSSKKELPPLRLTSSSKSLLGDLPPLRGPTVLAKRASNDNLGNVSSSSL
GERSHSHTSIDDSKSLLEMSTQASKTSITSINQEPASPALIENQNVTLGQ
SSNQDIPMNNQSSDQDLSPVRSQKSSILGDLPQLPGSQTSMVTQQQAVPD
IFSLQPQENESESTGADADDLANQDIDDILDFFMSSQQ Run BLAST on NCBI transcript from alignment at sc0000215:280217..281372 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015736 ID=TCONS_00015736|Name=TCONS_00015736|organism=Clytia hemisphaerica|type=transcript|length=1156bp|location=Sequence derived from alignment at sc0000215:280217..281372 (Clytia hemisphaerica)
TAGATCCAAACCTCTTGATAAACACGTGAGTGATGCGGAAGAAGATGTTG
CCATTCCAAAAAGACGTTGGGGTGAAAATTTCATGAGTGGAGTTGCACAA
TCACTTGATGAAGAACTCGGTGAAATGTGCGATGAATCAGTCGCTTCTGC
TAGTGAATCTGAACTCTCCCACAAATCAGGTTCTGAACAATTGGACAAAC
CTGTCAGTTTGAAGAGCACACCAGGTATGAGATCAACCGAACCAGTTAAC
TCTGGATCATCAAAGAATTCATGCTCTGAATATTTACTCAAAGACGTTTG
TTCCAGTGAATCTGATATCTCTTTAACAGACAATTCTGTATCTGGTTCTT
CCTCTGAGGATCTCTATTTCAGCTCATCCAGCTCGAACACCAGCTCTGAT
TCTAATGATAAATCATCAAAGAAGAAagacaagaaaaagaaaaagaagac
caAGAAATCTTCCAAGAAGGAGTTGCCACCATTGCGACTTACTTCCTCCA
GCAAATCACTATTAGGTGATTTACCTCCATTGCGAGGACCAACAGTATTG
GCTAAGAGAGCTTCAAATGATAATCTTGGTAATGTTAGTTCATCCAGCTT
AGGAGAGCGTTCACACAGCCATACAAGCATTGATGATTCTAAATCTTTAC
TTGAGATGTCCACGCAAGCATCCAAGACATCGATCACAAGCATCAACCAA
GAGCCTGCATCTCCAGCTCTGATAGAAAACCAGAATGTCACTCTTGGTCA
ATCGTCTAACCAAGACATTCCAATGAACAACCAATCATCCGACCAAGACT
TGTCCCCAGTCCGCTCACAAAAATCGAGTATTCTTGGTGATTTACCACAA
TTACCAGGCTCCCAAACGTCCATGGTCACACAGCAACAAGCTGTCCCTGA
TATTTTCTCACTTCAACCacaagaaaatgaaagtgaaagtactgGTGCGG
ATGCAGATGATCTTGCAAACCAAGATATCGATGACATTCTTGATTTCTTT
ATGTCAAGTcaacaatgaaaaatatttttaaattataaattttagtaGTA
TATttgttaaccctttgagtgccagggtccttttttctaagtttttttta
aaaaatcgctagttcaaactttaagggcttatatctcctgatctagaagg
aattag Coding sequence (CDS) from alignment at sc0000215:280217..281372 >TCONS_00015736 ID=TCONS_00015736|Name=TCONS_00015736|organism=Clytia hemisphaerica|type=CDS|length=1017bp|location=Sequence derived from alignment at sc0000215:280217..281372 (Clytia hemisphaerica)
AGATCCAAACCTCTTGATAAACACGTGAGTGATGCGGAAGAAGATGTTGC
CATTCCAAAAAGACGTTGGGGTGAAAATTTCATGAGTGGAGTTGCACAAT
CACTTGATGAAGAACTCGGTGAAATGTGCGATGAATCAGTCGCTTCTGCT
AGTGAATCTGAACTCTCCCACAAATCAGGTTCTGAACAATTGGACAAACC
TGTCAGTTTGAAGAGCACACCAGGTATGAGATCAACCGAACCAGTTAACT
CTGGATCATCAAAGAATTCATGCTCTGAATATTTACTCAAAGACGTTTGT
TCCAGTGAATCTGATATCTCTTTAACAGACAATTCTGTATCTGGTTCTTC
CTCTGAGGATCTCTATTTCAGCTCATCCAGCTCGAACACCAGCTCTGATT
CTAATGATAAATCATCAAAGAAGAAagacaagaaaaagaaaaagaagacc
aAGAAATCTTCCAAGAAGGAGTTGCCACCATTGCGACTTACTTCCTCCAG
CAAATCACTATTAGGTGATTTACCTCCATTGCGAGGACCAACAGTATTGG
CTAAGAGAGCTTCAAATGATAATCTTGGTAATGTTAGTTCATCCAGCTTA
GGAGAGCGTTCACACAGCCATACAAGCATTGATGATTCTAAATCTTTACT
TGAGATGTCCACGCAAGCATCCAAGACATCGATCACAAGCATCAACCAAG
AGCCTGCATCTCCAGCTCTGATAGAAAACCAGAATGTCACTCTTGGTCAA
TCGTCTAACCAAGACATTCCAATGAACAACCAATCATCCGACCAAGACTT
GTCCCCAGTCCGCTCACAAAAATCGAGTATTCTTGGTGATTTACCACAAT
TACCAGGCTCCCAAACGTCCATGGTCACACAGCAACAAGCTGTCCCTGAT
ATTTTCTCACTTCAACCacaagaaaatgaaagtgaaagtactgGTGCGGA
TGCAGATGATCTTGCAAACCAAGATATCGATGACATTCTTGATTTCTTTA
TGTCAAGTcaacaatga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015736-exon-sc0000215-1491911889:280217..281372 | TCONS_00015736-exon-sc0000215-1491911889:280217..281372 | Clytia hemisphaerica | exon |
| TCONS_00015736-exon-sc0000215-1510915933:280217..281372 | TCONS_00015736-exon-sc0000215-1510915933:280217..281372 | Clytia hemisphaerica | exon |
| TCONS_00015736-exon-sc0000215-1575043694:280217..281372 | TCONS_00015736-exon-sc0000215-1575043694:280217..281372 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000215 | supercontig | sc0000215:280217..281372 . |
Blast
The following BLAST results are available for this feature:
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