TCONS_00015754 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015754
Unique NameTCONS_00015754
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length461

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015754 ID=TCONS_00015754|Name=TCONS_00015754|organism=Clytia hemisphaerica|type=transcript|length=461bp
attgagaaaatTGTTGTTTGTCCAGTTTCGCCCCTCAAAATTCAGGGAAT
GTCTTCTGCAGAATCGGAAAAACTGGAAGAAAGTACTGTCTGAAGAGGTT
CAACTGTCATCCAATATTTCTTCAAACTGTCCAATCATGGTCTTCAAGCT
CTGCTATTCCTATCATCCATCAGTCACAACCGGAAAACGAGAAAAGTCCT
CAGTAAGCTGCTGTACAATATCTCCACGCAACTCTTGTGCAACAATTGGA
GGGCTTTTAGTCCAGCATCTACCTCAGTGAAATGCGCATGATGACGATGG
CTTTAACATAAACAAATCTTGCAATTCTTTCATTGATCACTCCTTCCTAT
CCACTAACTAGGTGAACGTGGAGACGGACCCACCCGATGTCTACCAAAAT
TGAGTATTTTACACAAGTTCCATTAACATATCGAGTCTGGAAGATGTAAC
CAAAGAATTCC
Run BLAST on NCBI

transcript from alignment at sc0000216:331289..349613+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015754 ID=TCONS_00015754|Name=TCONS_00015754|organism=Clytia hemisphaerica|type=transcript|length=18325bp|location=Sequence derived from alignment at sc0000216:331289..349613+ (Clytia hemisphaerica)
attgagaaaatTGTTGTTTGTCCAGTTTCGCCCCTCAAAATTCAGGGAAT
GTCTTCTGCAGAATCGGAAAAACTGGAAGAAAGTACTGTCTGAAGGTAAG
GAATTAATTTTACGAAATTGCTTGTGCTGTAAGGAAACAATACGTCTGAA
ACGTTTAAATTGGCTCTGAAATCTTTCGTCTTTGGACTATTTGATGCAAT
CCTCTGTAAAGTTGATAGGTGTATGAGAAATTTCACTATCGCAATGAGGC
TCGCTCAAAATTGATATAAAGTCTTCTCAATGAAAACAAGTggtactttt
atggacctacctggttatgcatttaacacatatataattgatatctacgt
gagcatgaccgttgaacaatcattcagaacacaaatagtgacgatctatt
aagattagttgtttgtttcttataaaacatgctgaatggacctacctgat
gatgaaagttagatagcaatgcgaaaagaaaaatgaaaaaatcagtcagc
acacatagaaatataaggaaaaaatccattgaaaatctgcaaaaacggcg
atttccagcattttcaaccggaaatttttttttctcaaaaatcgaactcg
gccatgttttgaacattgcgaatacgcatctttctgcaaaaaatcagaaa
aaactaaaaatgaaaattcgagaaaatgtcaaaaaatcgattttccgaca
tatttccggcattttcggccggaaaattttttttttgaaaatcgggctca
gtcacattttaggtattgtcatattgcatcagtgtatacaaaatttcata
aaaatataaagtacagcttgagATTCAAGAAATAGTGTtcttccggcgaa
aatcggctgttccggcgatttttagaaagttctggcttcaaaaatcaatt
ttattgaaaattgaaacatgcttgatggtggacattgctattaataatgt
ttttgaatgaaaaaaacaaccaataatatggaaaaagtctaatgaaaatc
cagaaaaacggcgatttccggcatatttccagcattttcggccggaaaaa
atttttctcaagaatcggactaggccatgttctgggcattgttaatacgc
atctttgagcaaaaaatcagaaaaactaatgatgaaatctcgagaaaatg
ccgaaaaaccagtttttccggcataattatttccgccatttttggccgaa
aatttttttttcgaaaatcgggctccgtcacattttgggcattaccattt
tgcatcattgtgcaaaaagttagaaaaaactaatgagccgatctcgagaa
aagctggtaactaacggacggacggacagacggacggacaaaggttaatt
tataggacctccaggtaggtccaaaagtgAATTTGCTATTACACAGCAAC
TAGAGTCTCCATTCCCCCTAATTTATTGATTcattcaattctgttttgat
tttcatttttacttttaCCTATAGAGGTTCAACTGTCATCCAATATTTCT
TCAAACTGTCCAATCATGGTCTTCAAGCTCTGCTATTCCTATCATCCATC
AGTCACAACCGGAAAACGAGAAAAGTCCTCAGTAAGCTGGTACGTTTCCA
TGGATGTTTTATAGATCATGATGTCTCTAGCTCTTATAGTGTCCTGTTTC
ATTTGATTTAAATGAATCAAACGAATAATCTTTTAGATACATCACCCCCG
GCTCCCATATTACAGGTTGCACTGACCTGTTTAAAATTATATCATCAAAA
GAACTATAAACTGCTCCTAAAAAAGTTGACAGCCTGCacattttgataaa
agtgaaaCCTCTGAGATGGAACTATCTAATTTGAAAGTTATCATTTTGTC
AGTAATATCTCTTGTCTTATTTTAGCTGTACAATATCTCCACGCAACTCT
TGTGCAACAATTGGAGGGCTTTTAGTCCAGCATCTACCTCAGTGAAATGC
GCATGATGACGATGGCTTTAACATAAACAAATCTTGCAATTCTTTCATTG
ATCACTCCTTCCTATCCACTAACTAGGTAGGAtaatatatttcctttaaa
ACTTCCTCTACTGGATAGGATAAGATCTACAGCAGTGTGATTGGTTCGAA
ATAGACTTTTTTTGAGAGAAGACCCGCGACATGTTGTTTGGGGTACCATA
CCTTTGAAGCGAACCGCGGCATGTTGTTGGGGGTACCATACCTTTGAAGC
GAACATAGATTGAGAGTAGTTTGCACcccctttgaaaaaaatatttttag
ggccTTTTTGCAAGGGGGAGGGGTATCAAAATCTGCCTAAAAACCTGGGG
GATGGGAATGTAACAGGGATAATATAAGGGGGTTGGACATTATGGTCAAT
TTAATCATATAAAAAATGGTCACAGTCTgttcaaaactaaaaatatcata
gtgtcctcccccccccccccttaaaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTAACCATATggggaaccgcaaaatcttcaaatagctgggggaat
tcaaaaaagaggggggaaccgaaaaactttgaaatatggtgggggaaata
atagaggggggaatggagaaaagttttgatttttagtggggggaaccaac
ccaggaggacactatgataaTATGTACCACCAAAACACAAattgtaccgg
gtgcgccacaaaaaagtttctctctttgaaactaattttctcgaaatcta
aaaattttaaaagaaccattcctttttcattgaaaagaagaaagataaac
ttgaATTTTTATGGGTCATTTgctaaattcgattcattagatcaaaagtt
atgctcaattgaatgaaaaagttactttcagaaagtgctcgaaatcgtta
aaaatcgacctatcaaattttcattttaaaattggcaataacaatagcct
ttacatgattaagagtatttttcagtaactaaacacataaattttgaaac
tgaagggtcgaaagggttttaaatcttcatcaaaatcactttaatttact
tttaccgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNgcctttttcgacgaattttcttcatttcattgaaattcaaccttcct
ttatacaacaaaaggtcatttagacagctaattataatttttaatgactg
aaatgaaaatactgatgtatcgtgtaattatgcttctgtttgatttgata
ggtcgacttttaacattttcaggcactttctgaaagtaacttttctattc
aattgagcataacttttgatctaatagatcaaatttaataaataacccat
caaaatttaagtctatctttcttctttccaatcaAATAGGaattggttct
tttaaaatttttagatttcgagagaattagtttcaaagagagaaactttt
ttgtggcgcacccggtatatcaTGTTGATAGAttatattgttttattttg
tgaaATCTTTGGCTTGTTACTCATAGCTTCAGCCTGCTTCAGCCTTCAGC
CCCCCctatttttttttggggggggggctaagaaatattttggcctttaa
agagcctgggggctaaaattaccaaaatatttgggggacctagattgttg
gggggcctagatgatctgactgagactctgggggctgttcagctaatttc
aaaagatcCCTTATCTTacttaaatcaaatataaaaagcaaaagatattt
aaacatgaatattaatacaagtaaaatCATATAttctttattgacttctc
tctacgggggcgggacctgaagtgttaggggacctagcacaaggcaacTT
TTTTTGGGGGAGCCAAATTGTtgaccttactttgttgggggggagctaga
aacctggctgaagctatgtgTATAAATCTTGTACTCTTTGATCACATTGA
TGGTGCATAGAGCGAGTTTCCTCGAAGcaaattttctgtaaaacaggggg
gggggtataaTTTCATTACTGCGAAAGTCTACAGTTGAAGATTTAGAGAC
ACCCTGTGGGACAAGAGCTCTGTTGAACTTGTACTTGAATCATCTTTTAA
ATTGGACAAAGCTCTTCCTCCACGATTCTTGGTCTTACATTGCTGTTATA
TGATCGTTTTCCTCCAGACCAGTATCTTCTTGAATCAACGATGATGAACC
GTCTAACACGTCTTGGGACCTACATAGGTCAGTACACTTGCAGTCTTGCA
GGTCCGTCATGTTTTGCCGTATGATCAGCAAGAGCGAATGTTCGGCATCG
AACTACTTNTCATGTTTTGCCGTCATGTATGACCAACAAGAGCGAATGGT
CGGCATTGAACTACTTCGGATATCATCGGAAGTGATCAATAAACGAATGG
ATTCGTCTGGTGGTCTTTCCTCGATTGTAGACAGCACGGAGCATCTTGGT
GTAAAGATCGTCAAGATGTTTTGCTTTTGCGATATTCAGTGACCATGATT
AAGTTGCACCATGGAAGAaagttcaaattcaaattcaaaacttatttatt
cgcctgcatatcattaaaaatttacatatttaagtttgtataaattaggg
GAGGGGATGCAGGCCAGGagcaggcacgacggaagctttttatatctggt
acggcgaatgaggacatttaagcgattttatagcgagtttaccgacgaag
aggaaaacttcgggtatttttgtgaaaatctggtacggcggNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTATTCCAaataacaaagtaaaaa
aaaactcaacgtaactatcgacaaaaaaaaatatagttatataagtaatc
ttttgttttaataaatcaaattaGAGGATTGATTCATCACTGGCTTGAaa
aatttatgtgtttgtttgttttgagatGGGCGCCTTccatattttgaagt
cattaACGCGTTCAATCTCGATACCGTCTGACGAGTACAGTTTTGTGTCA
GTCCATGGATTCAGGTGCATGTATCCATTCTTCGTTGCGTTGAGAAATAG
CTCTACATCTTGACAAGCTCTTTCAACCTTTAAAAACAGACTTTGCGCTG
TTATTATCGTTTCCTCAAGACGGGTTATGTCGTCGTATACGTGGTATGCT
TTAGTCTAGATCTGGAAGACGTTCTGTTGGAAAACGTCTTCTTTTACGAC
GTTATAATGTCACtttgtagtctagcaagctagatgACTAATCAGACAta
atagaaataaagcaaaaagtaatggagggaacaattttagttagAATAAT
TTAGTTTAAATACAAACTacatcccgtaacaataatcgtattatcataca
ACTCCTATACTattgtattacacgcattataaacgactccagtctagtca
CTTTGTAAATTATAAGCGGTTCTTGAAAGGAGGATTCTGTTTCTTCCTCT
GGTATCATCACATGAACAGATGTATTGTCGTGCATAATTTGGATGGCGTT
TACAACTTGAGGAGGGATATCGTATATTTCGAGAATCAGAAACATTTTAC
TTCGGGCAATCGAGTCGAATGTTTTTCTGTCCATGAATGGTTTTACAGCA
GCTTGGTGATTTTTGAGTTCTTCAAGGATGCGACCAACAGCTAGAACATG
GGCTTTCTTGTGTGAACCTGTTTTGGTTTGGTCAAAGTACTTTATTATGA
ACAGGTTCGACACCGATTGTACACTGGGATAACGAGATACCACGATAGTT
GCCAGTCTCCCAAGTTTTAGGTCGATCTCCAAAGAAAGTTTGGCTATAGA
AACGGTGTAATTTTCTTTCATCAATGGTAGTTTCCAGAATTCAGGAGGGG
AACCGTCTAGACCAGGGCCGTTTCGAAGAATACAACACTGTGGGActaaa
aagttaattttgttGACCAAATCCCAGGCGTCTTTTGTGTTTGATGATAA
TCATGGAATTCCGAATGAATGTAGGATGTTGTCTATTCAATTGTCCTCAC
ATTTATCGTATGTTGTGCGCAGGTTGACTCGAGCAATTTCAATCTTTTTA
GTTGCGAATATCAGGGTAATTTTCCGGGTAGCAGTAACGTCGTGATGATC
GACTGAGTTTGATGGAGTGCTACTCGGTTTTCGGGAAAGTAACTAAACTT
TTCTCCAGCTTTGGTGGAAATGGCGACGAAGGTTGAGTAGTATTTCTCAG
TTTCAGGAAGATCATCAAACTGTTGTGAAATGGAGTTATCGATTCGACGG
GCGAGATTCTCGTTTAAGTACATTGATTGCCAAAACAACTTTTCCTTCGG
AAGAGATGGAGGTTGGCGTACGCTGAGTTTACCACTGGCAGTGACTATTC
AATGATCACTACCGATTGGGTTGGGGCTGGAATATGCCTGGCATTCGACA
CAAGATAAAGTCAATTTGGAAAAGTGTTCCGCTTGGGGAACGGTGCATCC
AGAGCTTAGGACGAGGTTTCTGGAAGTTAGTATTTCTAATGATCAGATTG
TGTTGATTGCTGAAGTCGAGAAGCAAGTTTCCTGTTTATGGAGTCATCTT
ACGAAAGGTGAGCAGAGATTTTGGCACTAAGAAGTATGGAGTGAGTGGGA
AACTCTTCGATAGTTCGAGAAAGTGTACTATAGAATATGTTAAACTTTCA
GTTTTAAAATTGTCGATCCATATTTGATGAATGTCACATTGGCTTAGATC
ATCCCAATccagttttcttttttctttcctttgtaGTATATCCGGGTGTT
TTGGTTACTGAGCGGTATATACCTGTAACGGGAAATTGCACTCATCTTGA
AATACTTTTTTCTCCACCATACGGGAATTTTGTGCAAACTTCTTGTAGAG
GGTTTCTGCCCGTTCAACTCTTCGTCCGCGTGTACCTTCGTTTATAGAAG
GTGCTTTCAAACGTTTAAATTATTTGATTCCTTTCGACTTAACCATTCAC
CTAACAGATCAgtcagaaatcttcaaaatcttgGCAATGTTGTTTGGGGT
CACATGCCAGTACCCGGTAAATCTTCTGTACGTTTGTTGTGAAGCCTGTC
GTGTTGGATACGCCAACGTAATGCGACGTCTTTTTAAagaagagtgatat
cgtttgcttactcgtcaattttaacttAAGCTGTTTGATATTGAATTCAT
AGAGGTGTGAAGCAAGATTGGTGAGAGAGAGGAGAAGataaacatgtgtc
tgatatgagacGGAGACTCTtatgtaaaactaaaaccttAACTCTAAGCG
TGAATCTAGTCAATTCTTAATATAGTTAAGTTAATAATTCATATAATCGA
CAAATGTGAGCTGTTGCATCTTGCGTTCTGATTCATCTATGTCGGTCTTA
TCGGAAAGTTTTGTTGCCTGTTAAGCTTGCGAATTTGCTAATGGTAGATT
TTGGGTGTTTTCTTCTTATAGGACGAGAGTTGACTGACGGTATTAATTAA
ATGAAGgtttacaatttttgatttgaagTTGACGTTGATTGAATTTCGGA
TGAGAGATCTTGTTTAATCTTCTCTTCAATGCTTATGTTCTCGATCATCA
AATGGTTATTGCTTTTGCTATCTAAGACAACCACTGATTGATAGCTGGAA
TGAGTTGTTTGTGGTGGTGTTGTTGTTGAATTTGCCAAAATGGCCAACAT
GTTGTTTGTGAACATCAGCCAAATGAAGGGCGTCCCTCCATAATGCCAAG
ACTTCAATCAGCACTAGTCAAGACTGATTCGAAGATTGATAGGCCGTTTA
CTTACTTCTTCTTACTTCTTCTTTAGCTCGTGTTCGCATATGCCAACATT
GAGTGGTTAGGGCGAAGGCCAACCAtatccttctttttctttttcttcaa
gacCTCTTTGTAGAACCCGTCTGCTGAACGACCATCAAGCACGTGATCTT
CGAGTGTTTTCATTGGTCGGCCTCTCTTCTTGTCAGCGTTGTCGTTGAAA
AGCAGTCTTTTGATGATGCTGGTGTTCTTTTGTCTTGCAATATGGCCAAG
ATAGTTTTGCTGCTGTTGTTTGATGTATTAAAGGATGACTTCAGTCTTGA
AGTATGCAGACGCGTAAAACATCTTCACTGGACATAACGAAGAGGAAAGT
TTCTTCATTGTTGTCATCGATTCTTCTTTCAAAGCCGCTTCTCGCCATCT
TACGAAGCATATTGATGTAGTTGGATCGCTGTTGTTGATGTTGTTTTGTT
GAGTGATATTCCACGTTTGACAGGAATATGTCAACTGACTGCGCACTTAT
TTTGAGCAAAAGCAATTCTTAGGTCAATCTCTGCATTTCATGTTGGAGGT
TGATTGAAGTGTATGTCGTCTCCAAGATATCTTAACACTTCAACATTTTC
GATGACTTGATCATTAAGCGTGGCGAAAGATTTGGGATATTCACCTTGGT
TTTGGGACTTAAAATTTATTATCATCGTTTTATTTGGAGGTGAAAACGAA
GAAATGttttattgagaattttcaGCCCTGTAAATATTAATAATTTAAAT
ACAAGTTCTAAGTCGTCAGTGTAACCAGCCCAGTGACCAGTATGTTTACC
GTAATAGCCTTTGGCTCTTTCATCTCTGGTTGTAGCGGTGGCACGAATTC
TGTACTTCAGTTTAAGAAATTTAACCTTGTTCTCTTCACAGTTTTGCATA
AGCACACGCATGACAAAATCCATGTACGGGTTGTATAGTGGTGGGGATTC
TGCCCCTCCCCTTGGCGAACGCCAAGTAGATGCTCGTAAACACCATCTGG
AGTTTGTGCTAATGATGTTGTTGTTTTATGATACAATGATTCGAGAAGAT
TAATCAGAGTAGGCTCGACTTCCTCGGGAAATCTCAGGTAGATAGATTCG
AAGAGCCAATTTTGCACAACGTGGTCGAACGCTGAGCTTAAATTGACGAA
TGGGAGAAAGAATGGTTTTTTTGTTCTGTCCGAAATTTGTCACATATATG
CCGTCTGCGGTTCCTCTACCCCGTCGTCTAAATCCTTGCTGCTGGTCGAG
CAGTTGTTCGTTATGCCAGTCTTCAAGATTATTATCACCATATTATTATC
ATTTACAAAAACTCAATCCTATTTGTAAACCTCTGTGCGATGCCGAgtgt
tttgcaatttttttagcTTCTCCTTTCCATAAGGCAATGAGCTTCGAATG
ACCCCGTGACGACGGTATAGATTTTCTCGTCCATATTTGAAGAAGTAGCG
ATTCGAGCTCTGATAGTAGCGCGTTTGATGCGACTGCACACTTGAAGAAT
TCTGCAGGAAGATCGTTTGATGATTTACCATTCTTTAAAGATTTGAGGGT
AGATacaatttcgttcttttttggaGGGTCAATATTGATGAACTCGCAGG
TATTTTGTTGCAATACAGCAATATAATTTGGTATATCAATCATCAATGgg
ttttatttcattatttataCTGCCAGtgaaatgtttttcgaaatatgttt
tCAATTTCTCTGGGTCACACTCGGATTTTTGTCTCATAGATTTGAATGTT
GAACCGTCGGACTTAATGGTTTTGAAGCTTCTTCTTGCATTTTGAGATTT
CTCAATTGGCGCAAACGTTTTTCAATTCTCTTGGAGTGCTTTTTGTATGA
CTGTCCATATCGTGTCGTATCGGATCGATCACAGAGCAGAGAATTCAGTT
CTTCATCGTTTTTCCAGAGTTTTTTGCTGGTCACTGACTGGTCGCTAGCA
AACTAGACGACTAATTAGACAtggtagaaataaagcaaaaagtaatggag
ggaacaattttagtcgtctagaaacctttgtgcactaactccaaacaaaa
gaaaagtgtcaatattacaatcataattttttcccgttcaaaaaaaattt
tgaaaaaaaaatgtgtgtggatttgtgtgttgaaaaatttttcatttgag
ttggttttgttttgagagtttgtcgttgcttgataaattgttttctccct
acgcaagtttctgcgtagctagctgGGGATTCTATAAgccggaacaccgg
attcttccattCTTCGTTTATACAAaacttaataataataataataataa
taataatgtatacaagttcaaggcacacgagggcctctgagaaccggatc
ttgattacaattgtcttgtctcGAATCTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NCAAAAACATGTTCAAGCTGATTTCCATCCAAACAATATGGATAGGCATG
TTTGATGTCAGAGAATTTGCCAATAGTTAGTACGTGACATTTGTCGGgat
ggaaattttggaaatcccgtaacaattatcgtaaCAAGTATTATATTATC
TCGTATTATCATGTagcgcctatactactgtattacacgcattataaacg
acccCAGTCTACCTCGTTTGCAGCTTCCtcaacagtttttgaaaaattct
gtgAAAATACATTTACGTCTTCATCGAACGGACGATTCGCTTCAAGCTTT
CGATTCAGATTCCCAACACACAATGTTTTATCTAACTGTAGGTATTGGTA
GAGACTTAACATGACGTTTCGGTTCGTTTGGTGTTTTGTTGTATCTTCTT
CGAGCAATTCTGGTTGGGTGAGTACATAGGGTTGCTTTGAGAAGTCGGTG
GTCTGTGTCAATACCTCGAAGTAGCATCTTTTATTTCAAATGGAATTCGG
GAGTAgaaatgtcattttttgtttgttttcggGGGCATTGGAGGTAAAGA
GTAAGAAGGATTTAATATTACTTTCTCGTTCGcaatttcaaatcaattga
TAGTTGTACTGCGCTATCTCGAACGAAATACGTTTTGGAAACTCTTGGCA
TCCAGCCAGAGGTTGGGTGAgcattaaagggacattaaagtagtaaaatg
taaacattgcgcgaaccacgtgtcattaaagagaacaattaaaatcacgt
gtccaaaacaaacttgtaaaacaattgaacaatcaaaattagccatattt
ggttagattttttattttgacatgtgacatttgttttgattttgtatagc
tgctgcatacagtttgtttacaaatttcgcaagtactgttatgtcccatT
AATGTCTATTGTCAATATATTGTACAATATCGCATGAGCGATAAGTGATG
TAGATGATTGTAGTAATCAACCCCACTTGCTTGGACTCGGTTACCACAAG
GCCCAATGTTTCCCATCTTGAAAATGATATTAGGTTCAAATCGAAGATAC
GTCTTGTCGATCATCCCGTTTTTCATTTACAAGTTttggaagcaaaaaaa
gtttGCAACGGAATGCTCGACGTATGTCTGATTCTCTCAATCTTGGAAAG
ATTGGCTAAGTACGTCCAATCACATTCCTGCTGTGGATGTAAAATACCAG
AGCTTGTGAGTGTACGTGTGTGTTACGTCCCAGGTCAGCCCTATTTAAGA
GGAGTCACTACTTTAAGGGAATTTCGAACGGCGGTTCGGTTCTCTCAGAA
ACTTCGACGGTCTTGTTTCACCCTATAAGTGTCTTTGAGATCGAGGTGTG
AGGTTATTGTGTGATATAGGTTTCATCGTCTCCTAGGGATTTTCTACGCT
CTATAGTTTAGTTACACTGTATTACTTTACGCTGAATttatttaattgaa
attttaggAGAATTTCAGGGTTACCTGGTTCTCGGATACCCAGGTGGTAG
TTAGATTTCAGTCGTTAATGTGTTGGGCTGGAAAGTTGTCAAGATCATCA
TAGTTTGTATTATATCGCAGGCTGAGTTCGTTTTCTAATAGACTATGGCA
GGTAGTTGCTTGGCTCACGTGGTACAGAGCAAGTTTTTCGTCACTACCTC
TCACAACGCTTAGTGCTTTGGTCGCGTGATGCAGGgacattttttttctg
taaatacTTCATTTCTAATGGTACTAGCTTTTATTGACAAGTAAGAATAT
CAATAGAACTACCGGTGGGTATAAAGTCGTTTGATTAATTTAGGTTTTAT
CATATTTAGGATTTATCAAATATAACTGTTTACTTGTAAAGTTATTTCCC
TTTTTATGTATTGTTATATAGTCTGTCTGCAACCACTGCCTTGTTTTGGG
GGTTCCTTCTGTTGGgactaaattttccccaaaactgatTATGGGTTAGT
CAAATATGTGACCGCTGAacgaaattaattgaaaaatgtCTTACTCTATT
CTTCTCTTCTCTACTTCCCTCCAACCAGCTGaacgaatttggaaattaaG
CAGAATGTTTGtattttagaaaaagtttttctgaaagtcaATTAGGGTTA
GTGAAGATTTCCCAAAAGTTATTTGGTTCTGAATTACAATTTTCTCTTCA
AAGTGAGAGGCTTTTAACATTGCTACAATTTTGTCGCGTACGGGACAAAT
TTTTAGCTGTAAAACCcgtggaaaaaaattgaaaacaggaAAACAGCCTA
TAAAGTGTGGTGAAACTATTTCTTAAAACCtgacaaaatacaaaaacacc
aaaagaagttaaatttttgaaagaaaaaaatgttgagaaTTTGTTGAGCC
TTTCGGAACAATTTCATGCAAATCACCCGATTGTCGCGAGTGAGTTTTAG
GTGGGTGAGTTGACGTTAACATAGATTGGTTCATTGTTTGGTTTCACATG
AGATCGTTATGTGCTAAGGGTTGATATCANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTTC
CTCTAATAAGATCGacgtggtctaaaaccgcctatgttCTTTTGATAAAG
TTCGCTGGGTGATTGGCGCGAAATTgttccaaaatgaaaaatggcaCGGT
TTTCCAAATATATTGTGTACTGTGAGATAAGGTAactttttttggcccaa
aaatagTGTAATGGGGTTGTTTCGCTGGAACAAGCAAAATTATTCTAGTA
TTCCCTTAAGTTGAACTCTTATTTATGTACTATGTTATGTAGGCTCTAAA
AGTTTTACCATACGTATCTTTCTTTTTCGGTATATTTCACACTTTGTGTG
TCGCGTACGGGACAAAATTAGGATTTCCATTTGTCCTGTACgcgacaaaa
tttcaaaattcttaaaTTTAACGAGAAAATCCTATTTTGACCTAATCTTT
TATATTGATTAGTAATCCAAGATTTTTTAAGTTTGTTGTATAAATGAAAG
TCATCAAGGGTTAAAGAGTGATTTTTCCCCTACAGTACAATGGTGTATAC
CACAAATACCCCCATAGACTCTGATAGACCTATTTTAGAAAACGTTTTTC
TGAAAGTCAATTAGGGTTAGTGAAGATTTCCCAAAAGTTATTTGGTTCTG
AATTACAATTTTCTCTTCAAAGTGAGAGGCTTTTAACATTGCTACAATTT
TGTCGCGTACGGGACAGATTTTTAGCTGTAAACCcgtggaaaaaattgaa
aacaggaAAACAGCCTATAAAGTGTGGTGAAACTATTTCTTAAAACCtga
caaaatacaaaaacaccaaaagaagttaaatttttgaaagaaaaaaaaaa
ttgagaatttgtTCAGCCTTTCGGAACAATTTTATGCAAATCACCCAATT
GTCGCGAGTGAGTTTTAGGTGGGCGAGTTGACGTTAACATATATTGGTAC
ACTGTTTGGTTTCACATGAGATCGTTATGTACTAAGGGTTGATATCAAGG
GTTATGTCAAGAAAATATACAACTTTTAAGTTCGTTTCGGTGATAATCTT
CAACTTTTCCTAACCCCaagattttttggtttttgtagcccacaaaaagt
ttctttgaaTTCACATtgtcaataaaaatttaaaaattattggctaatgg
gcttttccagaaaaaaaccgtgcacccccttttgaggaggtccaaccttt
tgtgacctacccctttggaattccaggcaaatttaggatcatacccctct
ggaattccgaatttttacaaattttcaatcattacccccttggaatttcg
cttatttttgacggattttcgtctacccttatggaattccactgcatttc
aaaccttacccccttggaacggaaatggacctcctcaacagggggtgcac
gatttttttctggaaaagcccaattagaagttatcagcactttgaaattt
tgagttttaagtgattttagctgagttatgtcatgtttcacaataaagtc
ataaaacctgatctagaCGACCTATGAACCTAAAAATTtacacaagtact
cttaataagattttatcataatctaataatattttgaaacttCGGGCCTT
TCTTCAGAGTGGGTTGGTGTCTTTGTAACCAAACGAGCGATTCTCGGGGT
GTGAAAAGGGTATTCATTCCGCTCATGTACCCATTTTGCAGTGTTCACAG
TTTTacctagcctgttagacgaaaacggCTTTTTTATCGCcatttaaaac
aaagaaaaaattggtttgtgggaaggcacTGACTAGGTTTTACCGTCTCA
ATGAAGtattaaaaagaaacttttgctctccaccgtttaaggattaacaa
aaatttagcaaaatcttgaaaatattcttgTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggta
atttgaagacagatttttttaaattgatatcaatttcaacaacaaaaaag
aaactttaacagaTGAACATGTAAAATAAGAACCGATACTGACAAAAAGG
acaattttaacaagtttaaggtctatctacactgtaataaaatattgaat
tatacGAATTTTATTAgcggggggtcttaataagaacgggggggttggat
ttttttcttagcaattagcggggggacgtctattcgggagacaggagtag
cctgttagacgaaaaccgctttttatcgcgatttaaaacaaagaaaaaat
ttggtttgtgggaaggcacTGGCTAGGTTTTACCGTCTCAATGAAGTATT
CAAAGAAActttcgctctccaccgttttaaggattaacaaaaatttagca
aaatattgaaaatattcttgttGAGTTCATTTTCTGTCTGAGATGAAAAA
CTTTGCTTTGATACACAACAATACATGATACTTACGCTGTTCTCGATATT
CGATAAGATTCATATTCCGAAtgatacattaaaggaagaaatttttggcg
ggaagaaaatttggtggataagttaaattcccgccaaTTTTAAGTTACTC
TATTTATTACCCAAATGTGTCctttttcaggctttaaaacaggttttcct
tttttatagccttttttggacaaaaatgtccttcgtccgccaaattaaat
tcccaccaaatttaatttttcaagtatgccgtcaaattaaattccctctg
aaaaaactttttcggccaccagccaaattaaattcccaccaaaatttctt
cttttaatgtGTTTTCCTATTATAGGTGAACGTGGAGACGGACCCACCCG
ATGTCTACCAAAATTGAGTATTTTACACAAGTTCCATTAACATATCGAGT
CTGGAAGATGTAACCAAAGAATTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008800XLOC_008800Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015754-exon-sc0000216-1491911889:331289..331383TCONS_00015754-exon-sc0000216-1491911889:331289..331383Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1510915933:331289..331383TCONS_00015754-exon-sc0000216-1510915933:331289..331383Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1575043694:331289..331383TCONS_00015754-exon-sc0000216-1575043694:331289..331383Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1491911889:332763..332877TCONS_00015754-exon-sc0000216-1491911889:332763..332877Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1510915933:332763..332877TCONS_00015754-exon-sc0000216-1510915933:332763..332877Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1575043694:332763..332877TCONS_00015754-exon-sc0000216-1575043694:332763..332877Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1491911889:333164..333314TCONS_00015754-exon-sc0000216-1491911889:333164..333314Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1510915933:333164..333314TCONS_00015754-exon-sc0000216-1510915933:333164..333314Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1575043694:333164..333314TCONS_00015754-exon-sc0000216-1575043694:333164..333314Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1491911889:349514..349613TCONS_00015754-exon-sc0000216-1491911889:349514..349613Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1510915933:349514..349613TCONS_00015754-exon-sc0000216-1510915933:349514..349613Clytia hemisphaericaexon
TCONS_00015754-exon-sc0000216-1575043694:349514..349613TCONS_00015754-exon-sc0000216-1575043694:349514..349613Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000216supercontigsc0000216:331289..349613 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.28861	2.58574	0.993264	0.467855	4.33319	5.55175	4.93117	4.67837	2.34996	4.54714	2.96702	3.97718	1.62725	0	2.05105	4.04567	2.83697	3.32241	3.21423	1.36085	2.38088	0	2.49658	4.45354	5.00883	4.35676	3.35497	0	1.35785	3.6998
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015754 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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