TCONS_00015809 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00015809
Unique Name	TCONS_00015809
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1750

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000217:241298..247972+
coding sequence from alignment at sc0000217:241298..247972+

transcript sequence

>TCONS_00015809 ID=TCONS_00015809|Name=TCONS_00015809|organism=Clytia hemisphaerica|type=transcript|length=1750bp
ATATACACTCAAAATAGTTTGAAATtcagataggtagcttttttttGCTG
TGTTGAGTGTGGTGTTTGGTGTTGAATATACAATGTTTAAAATAATTCTC
ATGATATAGAAACAATAATTTTCAACTTTGTTAGATTATACTAAATGCTa
gatatgaaaatgaaaatctttccaAAACTTATAATTGGTATAACTATATG
CTTTCTTATGATTGGCTTTGGTAATCTcaatcaacaattttgtccaaTTT
TGCAGTCTTCACGTGAGGATATCAATTCAGACTTCTCCAGCCTGGGGATG
TTCTTAAATGGTCACTTAAAACCGTTTGGTTCTCACAGACCTCCAACAAA
GGTTGAAGAATTGAAATATATGATTTCgcctgaagatttttacatgaatt
ttgTTATCAAGCACAAGCCAGTTCTATTTAAAGGAGTAACAAAAAACTGG
CCAGCTTATACACAATGGAATGATGAATATTTGAGAGATCATTATGGCGA
TAATGAAATGAACATGGAAACAAAAGATGATGATAAATACAATCTTCCAA
CATCAAGAACATTCAAAGATTTTCTGAAAGTTTATAAAGATTCAAATATT
TATATGGTAGATGAGGTCTTACCAGAGATGAGAGAAGACATTATATTACC
CCATTGTTTACGTTGTGAAGAAATGGATcgctttttctttgtttcttatT
ATTGGCATTCGAATGGTAACACAATGTCAACGGTACACGTCGATACTGAT
GAAAATCTACTATGCGTCGTCACAGGTCATAAAAAGGTCATTTTAGTATC
ACCTTTGTACAGCCACGATCTTTACGCGAACGGTGCGCGTAGAATGGGCG
TTCTAGACTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCGAAAGTG
ATGAATGTTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATTGTGTTTA
CATTCCACAAATGTGGTGGCATCAAGTCTATTCGAGGAAGGAACGTCAGC
AAGCAGTCTCTTTGTGGTGGAAGTCAAAACCTTTTTGGAGGAAAGTCAAA
GACCAAAACCCGTCTCTATCTGGACCCATGTCCAATGaCGAAAAAGGCTT
TTCATATGCAGACGCACTCATCGATTATGAGAATTGGGTTCAAAATGTGT
CCGAATCGATTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGAATGAGC
CATTATGAATGGGAAACGGACAAAGATCCGAATGCACCGACAACGCTAGG
TGACGGCGGAGACTTTGAAGAGGTAGTCTGAGATTTcagaaataaaaagt
aataGTTGgcaaagatcaaaatttgactaaaaatgatttttagtttgatt
tGCGAAATTTTAGGCTCGGTCGAGCCcgaaaaaaacttaatttttttcag
tggtcaaagcaatatttttcttctgaaaagTCTTATATATCCTTggtctg
agacggaaaatgggTTTTGCACAGCAAATTAGCagatattcttgaaattt
tgatgaattaGGCAAATTTTTGAGACGGAAAACCTCATTATAAACTTCAC
TAAGACGGAAATCCGCAtacatgttttgtttttttataagcatacaaaaa
tccgaaaacaggctcagagatgcttaggtcgaaagcttaataaggctgaa
aaatgcttgaggggatgtttaaatctaaagcataaatttagggaaatact
gaaaatccgtaaaattccagccaaaaaaagccaaaatcaggaaaaaaaca

Run BLAST on NCBI

protein sequence of TCONS_00015809-protein

>TCONS_00015809-protein ID=TCONS_00015809-protein|Name=TCONS_00015809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
MLDMKMKIFPKLIIGITICFLMIGFGNLNQQFCPILQSSREDINSDFSSL
GMFLNGHLKPFGSHRPPTKVEELKYMISPEDFYMNFVIKHKPVLFKGVTK
NWPAYTQWNDEYLRDHYGDNEMNMETKDDDKYNLPTSRTFKDFLKVYKDS
NIYMVDEVLPEMREDIILPHCLRCEEMDRFFFVSYYWHSNGNTMSTVHVD
TDENLLCVVTGHKKVILVSPLYSHDLYANGARRMGVLDLNASAVDLERFP
KVMNVPYYEASVEEGDCVYIPQMWWHQVYSRKERQQAVSLWWKSKPFWRK
VKDQNPSLSGPMSNDEKGFSYADALIDYENWVQNVSESIVRIRCQEQDVR
MSHYEWETDKDPNAPTTLGDGGDFEEVV

Run BLAST on NCBI

transcript from alignment at sc0000217:241298..247972+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00015809 ID=TCONS_00015809|Name=TCONS_00015809|organism=Clytia hemisphaerica|type=transcript|length=6675bp|location=Sequence derived from alignment at sc0000217:241298..247972+ (Clytia hemisphaerica)
ATATACACTCAAAATAGTTTGAAATtcagataggtagcttttttttGCTG
TGTTGAGTGTGGTGTTTGGTGTTGAATATACAATGTTTAAAATAATTCTC
ATGATATAGAAACAATAATTTTCAACTTTGTTAGATTATACTAAATGCTa
gatatgaaaatgaaaatctttccaAAACTTATAATTGGTATAACTATATG
CTTTCTTATGATTGGCTTTGGTAATCTcaatcaacaattttgtccaaTTT
TGCAGTCTTCACGTGAGGATATCAATTCAGACTTCTCCAGCCTGGGGATG
TTCTTAAATGGTTTGTTGCATGCTTTAATAAATCTTTAGCCATTCAGGat
ttcatgttgaataattaaaaactccagcattagAACAATTCCACGTAAAT
GAATTATCATTTTGTGTGCACAAATTTATTTCTTATCATTGTTTCGTTCT
GGagtttttattatttaaaatgATGTCTTTACTAGCAAAAGGTTTATTCT
TACGTTTTATAtgtatgaaattgaaaatattccctgtatttgaaaatttc
tatgcctgtcccttgaaaattgaattagaaaAAGTCAACCGTGGATCAGC
AACTGAACTCTATTTATAGTTATCCTTGTAAAAGTCTTTTATCTTCTAAT
AAGTATCtgacattttaagaaaatttattgaaaatttgtatcATGTATCT
TGTTTTGTTGAAATCATCAAAATGCTTTATAAATTatattctttttggac
ctaccccggtggggtagaggtcctataaattaaccgatgtccgtccgttc
gtccgtctgttcgtccgtccgtccgtctgttaacAGCTTTTCttaggatt
ggctcattagttttttttgatttttggcaccatgatgcaaaatggtaatg
cccaaaatgtgacggagccagattttcgaaaaaaatttatttccggccga
aaatgccggaaatatgccggaaaaaccggttttttggcattttctcaaga
tttcatcattagttttttctgaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttccg
gtcgaaaatgccggaagtatgccggaaatcgccatttttgcagattttca
tcggaatttttccttatatttcgttgtttttcacacaaaaacattattat
tagcGATTcccaccatgaagcatggttcaatcgtcaatagaactgagttt
tgaagccggaactttctaaaaatcgccggtgcagcccattttcgccggaA
AAACGGTATTTCTTGATTTTCTCGAGCTGTACTTTATATTTTTTTATGAa
atttttgcacactgatgcaaaatgataatacctaaaatgtgacggagccc
gattttggaaaaaaaaattttccgccggaaaaacaggttttttggcattt
tctcgagattttatcattagttttttctgattttttgctcaaagatgcgt
attaacaatgcccaaaacatggccgagtccgatttttgataaaaaatttt
ttcaggccgaaaatgccggaaatatgccggaaaaactgtttttttggtat
tttctcgagattttttcattagtttttgctgattttttgcttaaagatgc
gtattaacaatgcccaaatcattgtcgagtccgatttttgagaaaaagat
ttttccggccgaaaatgccggaaatatgccggaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNtaaaaaaattattgataacaataccaccatca
agcatgattcaattgtcaataaaacttttgcaattctgcaaccggaactt
tctatttctttttttcctaaacccctccccccccatcaacaatcaatgat
gacatttaatgcattttcgctaagcgctatattttcttaatgattgtttt
tctccttattgctatttaagtttcatcatcaggtaggtccattcagcatg
ttgcttgttttaacTAGGTCACTTAAAACCGTTTGGTTCTCACAGACCTC
CAACAAAGGTTGAAGAATTGAAATATATGATTTCgcctgaagatttttac
atgaattttgTTATCAAGCACAAGCCAGTTCTATTTAAAGGTATTTATTT
ATCATTACatgatttttctaaataaaGGAAATCTTGCCATATTTGAGTGA
ATTTAAGCCAAAATCGTTTGCATGTTTAAGGGAAGTTGTCTTCACTTGAC
AAAATGTTATCAGGTGAAATTTTAGGGCTTCTTGAGCCAAGGTTGTTTGA
AAAAGCTCTTttatattgggctcttccagaaaatgtccgtggTATATTGT
CCGGGgttagcgaaaaatcaaaatttgccttgtccggggggtaaatttgc
tctgtctgggggtaaaacccgttttccggggggcaaaaGTCACGACAaag
ggggtaaatcactgaaaattgttatatcctccacccccccccccccNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccccccc
cccatattcaattttttttctagaaaagccaATTGGTAATTTTTTAAATA
CGCATCAATTTATTTGAATTTCCATAAACTTATTCAGGAGTAACAAAAAA
CTGGCCAGCTTATACACAATGGAATGATGAATATTTGAGAGATCATTATG
GCGATAATGAAATGAACATGGAAACAAAAGATGATGATAAATACAATCTT
CCAACATCAAGAACATTCAAAGATTTTCTGAAAGTTTATAAAGATTCAAA
TATTTATATGGTAGATGAGGTAGTTACATGTCAGAATATtcattaaaaat
agaaaatgctaTATCATTTGTTATCTATGTGTTAAAGGTTAAGCGATGCT
TCAATAGTGCACTACAAGGTGAAGGAGCatgattttttcagaaaaaatac
acaatttgcTTCACATTACTTTTAAGTTTCATGTTAATACAATCATCAGA
TGTACAAGACATtatatcattgatatcatttgTTATCTGTATAACAATCG
AGAAATGGTTATATCAGTTTTATGTGTGATTTTGTAATTTCAGCATAATT
TGAATATCTGCAGGTCTTACCAGAGATGAGAGAAGACATTATATTACCCC
ATTGTTTACGTTGTGAAGAAATGGATcgctttttctttgtttcttatTAT
TGGCATTCGAATGGTAACACAATGTCAACGGTACACGTCGATACTGATGA
AAATCTACTATGCGTCGTCACAGGTCATAAAAAGGTATTTAGAGTACGTT
TGTAAGATTTAGTATTGATAAAAAGAATCAGTACTTACAATCATGggcgt
aatatttgagaaaaagggaCATTCActgggaagttttgaaaccacaatcg
atttgtaagtgctctaaagtacttcggaagggtagagttttaacatgaga
cttaagacttgaactgaggatccaaaagttcaaaaatgatcCAATAAGGT
TCATAATATAGCCTCgaagtctataaacccgtgccaaattgaaatatgcg
attaaatttaagaaatggcccaaaatcgacCTTCTCGCCCGAAccccaaa
tttcgaaaaacgaggaaataagcctaattctcaatagatttcgaccatga
ttgtacaacGGAGTTTCGCTAATATTGAcgataaagtaaaaattttcata
aactaAAGAAACTTAGGGGTAAGAAGAAACTGTATTTTCAATTAACCCCT
TGATGTTCCTTAATGTTCGAACTGGATACATTTGAGTCTCTATTTTATAC
GAACCTCAATAATAATTCGAATGTCCCTTAAACTGGAACAAGATTGCTAC
TcgcttcagttaacaatgccatATAAACCTGTCTCCAATAAGAACAAGAA
ACTATATAAGAGGCTTCGAAgaccgaaatattaagaacacattaagaata
ttttaaggctttatggacaaaaatatacaacaaatggtgaaaatggtgaa
aataaaaccaTGTTTTGgcataaaacttaaaaagttaagaacatccaaag
gcttcaaaagttttggatgctcttataaaaaagtgtattgtcCAGAATGG
CGAAAATTTAATCAACTGATACGTTTTATTACAGGTCATTTTAGTATCAC
CTTTGTACAGCCACGATCTTTACGCGAACGGTGCGCGTAGAATGGGCGTT
CTAGACTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCGAAAGTGAT
GAATGTTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATTGTGTTTACA
TTCCACAAATGTGGTGGCATCAAGTCTATTCGAGGTACACATTTTTTTCC
ATTAGCAAATCCACTTTTCGGGTAGGCCATGGGGTCGcttagaatttttt
gaaaagtttgctTCACCtttagagaagaaattttcgcggaatttaatttc
gcggcgGAGAGGAAATTTGACCTACTctgccctaaaaagaccaattttat
agGTGATTTTTAAATCTTGAGAATGTTCATGTTTCGCGGATTTGTCataa
aaaaccgcgaaaatttgttctgcgaaaatttcttcccttaaggtaccccT
GTTATTATGGgtgccatccatatagtacgtacgcagtgaagtgGGGAGAG
GGGgatttagcaaaagcgtacatctattgtttaaatgacatcatttctat
tgttctctgcgtacaagggggagggggtatccaatttttggaaaatcttt
gcgtacgttctatatggacggccccatGTTATTCCTTTAGTGGATGAAAC
TAATATCATTGCAATTCGTTGACTCTTACTTTTTTACTATCTGGTATTTT
AACCAAATACTGAGACctaaaaatacaactttttcaCGTCCTTCAAtcta
aaaaataccccaaatTACTTTACAAGGTTTCGAAACAGCTTTTCACCGTC
TATTGTtagatattattattatattattattatacgGTGAATTTTGTGAA
CGTTGCAGACGTTTCATGCAATTTAGGCAATAACTTTATTTCTCATTCTG
CTCTAGGAAGGAACGTCAGCAAGCAGTCTCTTTGTGGTGGAAGTCAAAAC
CTTTTTGGAGGAAAGTCAAAGACCAAAACCCGTCTCTATCTGGACCCATG
TCCAATGGTAAATCAATACTTTAAGGGAACTAAGTTTGCAAAAATAAGTT
ATATTTCGCATAAATTGANATCAATACTTTAAGGGAACTAAGTTTGCAAA
AATAAGTTCTATTTCGCATAAATTGACACTGGGTGAAATAAGCGATTTCC
AATCCtgaaaatatcttaaaaatatGGTATTTTGGAAATACAGTATGATA
TTTCCAAAAGTTAGAAATATTTAGAAAATATGATGTTTCGATCctggaaa
tatcatgaaatatgatatttcctaaactttggaaatatagaaaagtcata
tttccatatttactaATGTTCATGGAAATATcacattttcaagatatttc
cagagTTGGAAATCTctttatttcgcccagtgtgaAAATCAGTTTCGAGC
TGAtctttgaaaatcattttgccaaaatttatcATTGGTCATATAATGCC
CTGTTATCTAGCCGAGAACCCTGAGACAAAGTtgctttcaaaattatttt
tgatattttcagaCGAAAAAGGCTTTTCATATGCAGACGCACTCATCGAT
TATGAGAATTGGGTTCAAAATGTGTCCGAATCGATTGTCCGAATTCGCTG
TCAAGAACAAGACGTCAGAATGAGCCATTATGAATGGGAAACGGACAAAG
ATCCGAATGCACCGACAACGCTAGGTGACGGCGGAGACTTTGAAGAGGTA
GTCTGAGATTTcagaaataaaaagtaataGTTGgcaaagatcaaaatttg
actaaaaatgatttttagtttgatttGCGAAATTTTAGGCTCGGTCGAGC
Ccgaaaaaaacttaatttttttcagtggtcaaagcaatatttttcttctg
aaaagTCTTATATATCCTTggtctgagacggaaaatgggTTTTGCACAGC
AAATTAGCagatattcttgaaattttgatgaattaGGCAAATTTTTGAGA
CGGAAAACCTCATTATAAACTTCACTAAGACGGAAATCCGCAtacatgtt
ttgtttttttataagcatacaaaaatccgaaaacaggctcagagatgctt
aggtcgaaagcttaataaggctgaaaaatgcttgaggggatgtttaaatc
taaagcataaatttagggaaatactgaaaatccgtaaaattccagccaaa
aaaagccaaaatcaggaaaaaaaca

Coding sequence (CDS) from alignment at sc0000217:241298..247972+

>TCONS_00015809 ID=TCONS_00015809|Name=TCONS_00015809|organism=Clytia hemisphaerica|type=CDS|length=7959bp|location=Sequence derived from alignment at sc0000217:241298..247972+ (Clytia hemisphaerica)
ATGCTagatatgaaaatgaaaatctttccaAAACTTATAATTGGTATAAC
TATATGCTTTCTTATGATTGGCTTTGGTAATCTcaatcaacaattttgtc
caaTTTTGCAGTCTTCACGTGAGGATATCAATTCAGACTTCTCCAGCCTG
GGGATGTTCTTAAATGGTCACTTAAAACCGTTTGGTTCTCACAGACCTCC
AACAAAGGTTGAAGAATTGAAATATATGATTTCgcctgaagatttttaca
tgaattttgTTATCAAGCACAAGCCAGTTCTATTTAAAGGAGTAACAAAA
AACTGGCCAGCTTATACACAATGGAATGATGAATATTTGAGAGATCATTA
TGGCGATAATGAAATGAACATGGAAACAAAAGATGATGATAAATACAATC
TTCCAACATCAAGAACATTCAAAGATTTTCTGAAAGTTTATAAAGATTCA
AATATTTATATGGTAGATGAGGTCTTACCAGAGATGAGAGAAGACATTAT
ATTACCCCATTGTTTACGTTGTGAAGAAATGGATcgctttttctttgttt
cttatTATTGGCATTCGAATGGTAACACAATGTCAACGGTACACGTCGAT
ACTGATGAAAATCTACTATGCGTCGTCACAGGTCATAAAAAGGTCATTTT
AGTATCACCTTTGTACAGCCACGATCTTTACGCGAACGGTGCGCGTAGAA
TGGGCGTTCTAGACTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCG
AAAGTGATGAATGTTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATTG
TGTTTACATTCCACAAATGTGGTGGCATCAAGTCTATTCGAGGAAGGAAC
GTCAGCAAGCAGTCTCTTTGTGGTGGAAGTCAAAACCTTTTTGGAGGAAA
GTCAAAGACCAAAACCCGTCTCTATCTGGACCCATGTCCAATGaCGAAAA
AGGCTTTTCATATGCAGACGCACTCATCGATTATGAGAATTGGGTTCAAA
ATGTGTCCGAATCGATTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGA
ATGAGCCATTATGAATGGGAAACGGACAAAGATCCGAATGCACCGACAAC
GCTAGGTGACGGCGGAGACTTTGAAGAGGTAGTCTGAATGCTagatatga
aaatgaaaatctttccaAAACTTATAATTGGTATAACTATATGCTTTCTT
ATGATTGGCTTTGGTAATCTcaatcaacaattttgtccaaTTTTGCAGTC
TTCACGTGAGGATATCAATTCAGACTTCTCCAGCCTGGGGATGTTCTTAA
ATGGTCACTTAAAACCGTTTGGTTCTCACAGACCTCCAACAAAGGTTGAA
GAATTGAAATATATGATTTCgcctgaagatttttacatgaattttgTTAT
CAAGCACAAGCCAGTTCTATTTAAAGGAGTAACAAAAAACTGGCCAGCTT
ATACACAATGGAATGATGAATATTTGAGAGATCATTATGGCGATAATGAA
ATGAACATGGAAACAAAAGATGATGATAAATACAATCTTCCAACATCAAG
AACATTCAAAGATTTTCTGAAAGTTTATAAAGATTCAAATATTTATATGG
TAGATGAGGTCTTACCAGAGATGAGAGAAGACATTATATTACCCCATTGT
TTACGTTGTGAAGAAATGGATcgctttttctttgtttcttatTATTGGCA
TTCGAATGGTAACACAATGTCAACGGTACACGTCGATACTGATGAAAATC
TACTATGCGTCGTCACAGGTCATAAAAAGGTCATTTTAGTATCACCTTTG
TACAGCCACGATCTTTACGCGAACGGTGCGCGTAGAATGGGCGTTCTAGA
CTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCGAAAGTGATGAATG
TTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATTGTGTTTACATTCCA
CAAATGTGGTGGCATCAAGTCTATTCGAGGAAGGAACGTCAGCAAGCAGT
CTCTTTGTGGTGGAAGTCAAAACCTTTTTGGAGGAAAGTCAAAGACCAAA
ACCCGTCTCTATCTGGACCCATGTCCAATGaCGAAAAAGGCTTTTCATAT
GCAGACGCACTCATCGATTATGAGAATTGGGTTCAAAATGTGTCCGAATC
GATTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGAATGAGCCATTATG
AATGGGAAACGGACAAAGATCCGAATGCACCGACAACGCTAGGTGACGGC
GGAGACTTTGAAGAGGTAGTCTGAATGCTagatatgaaaatgaaaatctt
tccaAAACTTATAATTGGTATAACTATATGCTTTCTTATGATTGGCTTTG
GTAATCTcaatcaacaattttgtccaaTTTTGCAGTCTTCACGTGAGGAT
ATCAATTCAGACTTCTCCAGCCTGGGGATGTTCTTAAATGGTCACTTAAA
ACCGTTTGGTTCTCACAGACCTCCAACAAAGGTTGAAGAATTGAAATATA
TGATTTCgcctgaagatttttacatgaattttgTTATCAAGCACAAGCCA
GTTCTATTTAAAGGAGTAACAAAAAACTGGCCAGCTTATACACAATGGAA
TGATGAATATTTGAGAGATCATTATGGCGATAATGAAATGAACATGGAAA
CAAAAGATGATGATAAATACAATCTTCCAACATCAAGAACATTCAAAGAT
TTTCTGAAAGTTTATAAAGATTCAAATATTTATATGGTAGATGAGGTCTT
ACCAGAGATGAGAGAAGACATTATATTACCCCATTGTTTACGTTGTGAAG
AAATGGATcgctttttctttgtttcttatTATTGGCATTCGAATGGTAAC
ACAATGTCAACGGTACACGTCGATACTGATGAAAATCTACTATGCGTCGT
CACAGGTCATAAAAAGGTCATTTTAGTATCACCTTTGTACAGCCACGATC
TTTACGCGAACGGTGCGCGTAGAATGGGCGTTCTAGACTTGAATGCCAGT
GCAGTTGACTTGGAGAGATTTCCGAAAGTGATGAATGTTCCTTACTATGA
AGCATCAGTTGAAGAAGGTGATTGTGTTTACATTCCACAAATGTGGTGGC
ATCAAGTCTATTCGAGGAAGGAACGTCAGCAAGCAGTCTCTTTGTGGTGG
AAGTCAAAACCTTTTTGGAGGAAAGTCAAAGACCAAAACCCGTCTCTATC
TGGACCCATGTCCAATGaCGAAAAAGGCTTTTCATATGCAGACGCACTCA
TCGATTATGAGAATTGGGTTCAAAATGTGTCCGAATCGATTGTCCGAATT
CGCTGTCAAGAACAAGACGTCAGAATGAGCCATTATGAATGGGAAACGGA
CAAAGATCCGAATGCACCGACAACGCTAGGTGACGGCGGAGACTTTGAAG
AGGTAGTCTGAATGCTagatatgaaaatgaaaatctttccaAAACTTATA
ATTGGTATAACTATATGCTTTCTTATGATTGGCTTTGGTAATCTcaatca
acaattttgtccaaTTTTGCAGTCTTCACGTGAGGATATCAATTCAGACT
TCTCCAGCCTGGGGATGTTCTTAAATGGTCACTTAAAACCGTTTGGTTCT
CACAGACCTCCAACAAAGGTTGAAGAATTGAAATATATGATTTCgcctga
agatttttacatgaattttgTTATCAAGCACAAGCCAGTTCTATTTAAAG
GAGTAACAAAAAACTGGCCAGCTTATACACAATGGAATGATGAATATTTG
AGAGATCATTATGGCGATAATGAAATGAACATGGAAACAAAAGATGATGA
TAAATACAATCTTCCAACATCAAGAACATTCAAAGATTTTCTGAAAGTTT
ATAAAGATTCAAATATTTATATGGTAGATGAGGTCTTACCAGAGATGAGA
GAAGACATTATATTACCCCATTGTTTACGTTGTGAAGAAATGGATcgctt
tttctttgtttcttatTATTGGCATTCGAATGGTAACACAATGTCAACGG
TACACGTCGATACTGATGAAAATCTACTATGCGTCGTCACAGGTCATAAA
AAGGTCATTTTAGTATCACCTTTGTACAGCCACGATCTTTACGCGAACGG
TGCGCGTAGAATGGGCGTTCTAGACTTGAATGCCAGTGCAGTTGACTTGG
AGAGATTTCCGAAAGTGATGAATGTTCCTTACTATGAAGCATCAGTTGAA
GAAGGTGATTGTGTTTACATTCCACAAATGTGGTGGCATCAAGTCTATTC
GAGGAAGGAACGTCAGCAAGCAGTCTCTTTGTGGTGGAAGTCAAAACCTT
TTTGGAGGAAAGTCAAAGACCAAAACCCGTCTCTATCTGGACCCATGTCC
AATGaCGAAAAAGGCTTTTCATATGCAGACGCACTCATCGATTATGAGAA
TTGGGTTCAAAATGTGTCCGAATCGATTGTCCGAATTCGCTGTCAAGAAC
AAGACGTCAGAATGAGCCATTATGAATGGGAAACGGACAAAGATCCGAAT
GCACCGACAACGCTAGGTGACGGCGGAGACTTTGAAGAGGTAGTCTGAAT
GCTagatatgaaaatgaaaatctttccaAAACTTATAATTGGTATAACTA
TATGCTTTCTTATGATTGGCTTTGGTAATCTcaatcaacaattttgtcca
aTTTTGCAGTCTTCACGTGAGGATATCAATTCAGACTTCTCCAGCCTGGG
GATGTTCTTAAATGGTCACTTAAAACCGTTTGGTTCTCACAGACCTCCAA
CAAAGGTTGAAGAATTGAAATATATGATTTCgcctgaagatttttacatg
aattttgTTATCAAGCACAAGCCAGTTCTATTTAAAGGAGTAACAAAAAA
CTGGCCAGCTTATACACAATGGAATGATGAATATTTGAGAGATCATTATG
GCGATAATGAAATGAACATGGAAACAAAAGATGATGATAAATACAATCTT
CCAACATCAAGAACATTCAAAGATTTTCTGAAAGTTTATAAAGATTCAAA
TATTTATATGGTAGATGAGGTCTTACCAGAGATGAGAGAAGACATTATAT
TACCCCATTGTTTACGTTGTGAAGAAATGGATcgctttttctttgtttct
tatTATTGGCATTCGAATGGTAACACAATGTCAACGGTACACGTCGATAC
TGATGAAAATCTACTATGCGTCGTCACAGGTCATAAAAAGGTCATTTTAG
TATCACCTTTGTACAGCCACGATCTTTACGCGAACGGTGCGCGTAGAATG
GGCGTTCTAGACTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCGAA
AGTGATGAATGTTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATTGTG
TTTACATTCCACAAATGTGGTGGCATCAAGTCTATTCGAGGAAGGAACGT
CAGCAAGCAGTCTCTTTGTGGTGGAAGTCAAAACCTTTTTGGAGGAAAGT
CAAAGACCAAAACCCGTCTCTATCTGGACCCATGTCCAATGaCGAAAAAG
GCTTTTCATATGCAGACGCACTCATCGATTATGAGAATTGGGTTCAAAAT
GTGTCCGAATCGATTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGAAT
GAGCCATTATGAATGGGAAACGGACAAAGATCCGAATGCACCGACAACGC
TAGGTGACGGCGGAGACTTTGAAGAGGTAGTCTGAATGCTagatatgaaa
atgaaaatctttccaAAACTTATAATTGGTATAACTATATGCTTTCTTAT
GATTGGCTTTGGTAATCTcaatcaacaattttgtccaaTTTTGCAGTCTT
CACGTGAGGATATCAATTCAGACTTCTCCAGCCTGGGGATGTTCTTAAAT
GGTCACTTAAAACCGTTTGGTTCTCACAGACCTCCAACAAAGGTTGAAGA
ATTGAAATATATGATTTCgcctgaagatttttacatgaattttgTTATCA
AGCACAAGCCAGTTCTATTTAAAGGAGTAACAAAAAACTGGCCAGCTTAT
ACACAATGGAATGATGAATATTTGAGAGATCATTATGGCGATAATGAAAT
GAACATGGAAACAAAAGATGATGATAAATACAATCTTCCAACATCAAGAA
CATTCAAAGATTTTCTGAAAGTTTATAAAGATTCAAATATTTATATGGTA
GATGAGGTCTTACCAGAGATGAGAGAAGACATTATATTACCCCATTGTTT
ACGTTGTGAAGAAATGGATcgctttttctttgtttcttatTATTGGCATT
CGAATGGTAACACAATGTCAACGGTACACGTCGATACTGATGAAAATCTA
CTATGCGTCGTCACAGGTCATAAAAAGGTCATTTTAGTATCACCTTTGTA
CAGCCACGATCTTTACGCGAACGGTGCGCGTAGAATGGGCGTTCTAGACT
TGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCGAAAGTGATGAATGTT
CCTTACTATGAAGCATCAGTTGAAGAAGGTGATTGTGTTTACATTCCACA
AATGTGGTGGCATCAAGTCTATTCGAGGAAGGAACGTCAGCAAGCAGTCT
CTTTGTGGTGGAAGTCAAAACCTTTTTGGAGGAAAGTCAAAGACCAAAAC
CCGTCTCTATCTGGACCCATGTCCAATGaCGAAAAAGGCTTTTCATATGC
AGACGCACTCATCGATTATGAGAATTGGGTTCAAAATGTGTCCGAATCGA
TTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGAATGAGCCATTATGAA
TGGGAAACGGACAAAGATCCGAATGCACCGACAACGCTAGGTGACGGCGG
AGACTTTGAAGAGGTAGTCTGAATGCTagatatgaaaatgaaaatctttc
caAAACTTATAATTGGTATAACTATATGCTTTCTTATGATTGGCTTTGGT
AATCTcaatcaacaattttgtccaaTTTTGCAGTCTTCACGTGAGGATAT
CAATTCAGACTTCTCCAGCCTGGGGATGTTCTTAAATGGTCACTTAAAAC
CGTTTGGTTCTCACAGACCTCCAACAAAGGTTGAAGAATTGAAATATATG
ATTTCgcctgaagatttttacatgaattttgTTATCAAGCACAAGCCAGT
TCTATTTAAAGGAGTAACAAAAAACTGGCCAGCTTATACACAATGGAATG
ATGAATATTTGAGAGATCATTATGGCGATAATGAAATGAACATGGAAACA
AAAGATGATGATAAATACAATCTTCCAACATCAAGAACATTCAAAGATTT
TCTGAAAGTTTATAAAGATTCAAATATTTATATGGTAGATGAGGTCTTAC
CAGAGATGAGAGAAGACATTATATTACCCCATTGTTTACGTTGTGAAGAA
ATGGATcgctttttctttgtttcttatTATTGGCATTCGAATGGTAACAC
AATGTCAACGGTACACGTCGATACTGATGAAAATCTACTATGCGTCGTCA
CAGGTCATAAAAAGGTCATTTTAGTATCACCTTTGTACAGCCACGATCTT
TACGCGAACGGTGCGCGTAGAATGGGCGTTCTAGACTTGAATGCCAGTGC
AGTTGACTTGGAGAGATTTCCGAAAGTGATGAATGTTCCTTACTATGAAG
CATCAGTTGAAGAAGGTGATTGTGTTTACATTCCACAAATGTGGTGGCAT
CAAGTCTATTCGAGGAAGGAACGTCAGCAAGCAGTCTCTTTGTGGTGGAA
GTCAAAACCTTTTTGGAGGAAAGTCAAAGACCAAAACCCGTCTCTATCTG
GACCCATGTCCAATGaCGAAAAAGGCTTTTCATATGCAGACGCACTCATC
GATTATGAGAATTGGGTTCAAAATGTGTCCGAATCGATTGTCCGAATTCG
CTGTCAAGAACAAGACGTCAGAATGAGCCATTATGAATGGGAAACGGACA
AAGATCCGAATGCACCGACAACGCTAGGTGACGGCGGAGACTTTGAAGAG
GTAGTCTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008843	XLOC_008843	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00015809-protein	TCONS_00015809-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000217	supercontig	sc0000217:241298..247972 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.61262	1.69353	8.18873	9.75624	9.20072	7.00615	5.90088	5.22572	6.27197	5.95612	6.344	6.69184	3.61313	3.59846	4.71833	3.25043	5.02861	5.44051	4.08784	4.13964	3.23829	2.99174	2.56016	3.74995	2.39733	2.02069	3.40189	1.63376	2.75367	2.66528

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003347	JmjC_dom

Blast

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BLAST of TCONS_00015809 vs. Swiss-Prot (Human)
Match: KDM8 (Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.376e-18
Identity = 59/227 (25.99%), Postives = 106/227 (46.70%), Query Frame = 1

Query:  376 SPEDFYMNFVIKHKPVLFKGVTKNWPAYTQWNDEYLRDHYGDNEMNMETKD---DDKYNLPTSRTFKDFLKVY-----KDSNIYMVDEV---LPEMREDIILPHCLRCEEMDRFFFVSYYWHSNGNTMSTVHVDTDENLLCVVTGHKKVILVSPLYSHDLYANGARRM-GVLDLNASAVDLERFPKVMNVPYYEASVEEGDCVYIPQMWWHQVYSRKERQQAVSLWW 1020
            S + F   F++  +PV+ KGV  +WP   +W+ EY+++  G   + +E      D++++  T  T  +F+  Y     +D       ++   +PE+++DI +P      + +        W     T+S +H D  +N L  V G K + L SP  S  LY +    +     ++    DLE+FPK    P+    +  G+ ++IP  +WH V +  +   +VS WW
Sbjct:  191 SLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWS-QTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRAL-DLSFSVSFWW 415

The following BLAST results are available for this feature:

BLAST of TCONS_00015809 vs. Swiss-Prot (Human)

BLAST of TCONS_00015809 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KDM8	2.376e-18	25.99	Lysine-specific demethylase 8 OS=Homo sapiens GN=K...	[more]

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TCONS_00015809 (transcript) - C. hemisphaerica