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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015834 ID=TCONS_00015834|Name=TCONS_00015834|organism=Clytia hemisphaerica|type=transcript|length=3333bp TTTTTAATGTCATTTCATTGAGAGtcaAAAACGAACTACTAAAGATCAAT GGAAGTACACAATCCTGTTGAATACCATCATGGACCAACCATGGAGAGAC CATATTCAACACGTCACGAATCTTACTACTCAAGTCGACTCACAATGGAT GATTCCGAAATTATCACACTTCATCCTCTAATCATTGGAAAAGACATTGT TGTCTGTATGCCAGAAGTTAATAAAGTGTTACGTAATGTATACCAAGTCT TATCACAAGCCAATTACTATTTATCTAAGCATGGGATTACATCTCGACGA TATACAGGCGCCCAGTTGATCCGGATCAAAATGTTGGGCATTTTAGGACA TGAAGccaaagtttgttcttatattttgcAAAGAGATGCTGAGAGGATTT TCGATAGTTTTGACGTCAGTGGAGACAGCCGTAAATCCACCCGTATCCAG TGGATGGAGCCCGTATTATTAGATGAAAAACCGATGCCTCAATCTACGAC CCGTAGCAATTCATCCACGAATAGCAAGAACGATCAGCAGCAGGACGGCC CGGTCAAAGTTCATCTTTTTAAACTGAATGACGATATTATAGTCTGTGCA CCTGAAGTTCAAAAAGTAGTCCAGTCTAATTTCCACCAAGGTGCAACAGT CGGTTATTATTTCACCAAACTTGGTATTGTGCCTTACAAGTTTATCCATA CATCACATCTAGATAAGATAAAGGAACTAGGAATTGTGAAGAAATGCGCA GTCCATTGTACTTATATTTTGAAAGATGACGCATTAAGAGTCTTTGAAGC ATACGGTATGACACAAGATCAAATTGAAAATCATGTTGAATTCCTTGATG TGATGGTGTTAGCTGAAGGAACCTCCAGATCGtggaaaaataagaaagaa cGTTCATCACCGTCAACAAGTAGCCTAGAATCACCGCGCGGTGGAAACTG CTTATCACCAGCCAGCAACGTGTCTGACTACTCTGGCAAACATGATCTAG AGACCGAGGATTATGCTCAAGCCTCTGATAAAGATATGACtgttcatatt ttcattgtCGAAGGAAATGAAGTTGTCTGCATGCCTGATATccataaaat tgttcaaaatatcCACGGCAATTCCATCCAAGTCAATTACTACTTTAATA AACTCAAAGTTCAAAAACGCCGTTTTTGTTTTGCTCATTTACGTGAACTA AAGAGTCGTAATATTTTACAGAACAATGCAACGTATTGTACTTACGTGCC AAAATCAGATGCTGAGAAACTATTCCAGATTTACTGTTTGGTGGATGATC CAAAGTTGAAAGGAGTCCAATGGTCAGAACCAGTGAACTTGGATAACAAA ATCTCCAATTTAGCGTCACCGACACTATCAGAACCAGATACCAACGTTTT TGATGACAACGAAAAAGAATTAGTGGTACATACGTTTACAATGGAAAATA GTACCGTGGTAATTACAGTTCCGGATGTTCACCGGGTTGTAGATTTCCTT GATGAACAGAGCGCATCTCTTGATTACCATTTCCGGAAACTCGGTATCGC GAAATGTCGCTTTACATACGCTCAACTCCATCAATTACGCCGCCTCAACG TCATTAAACGTCCAACCGTATGTACGTACATTGCCAAACATGATGTTAAT CGCTTGTTGAAAATGTATGAGACCGAACGTAACAGACACCGGATGAATAA AGTCAAATTTTTACCACCGGTACAGCTAGTACGCGGAACTCCCCCTCAAC AACAAACCGGAAACCCGAAATACATCAAACGTGAAAAATCACCTCCTAAA ATCAAAACTAACGGTCGACAGTCGCCATCGCCCACCAAGGTGATGTCCCC CTACCACCAGCCCGCGTCTCCTACCACTGAACGAGCACCTACCAGTTTCA CCAAGCCACCTACCTCCTCCCCACCCAACCCACACCAAGAAGAAGACATG CCATCCTCACACTCAGTCGCTATCACGCACATTCAAAGCATCCATCCAAC CATTGATTGCCCGATTGTTATCCCGAACGGAGATTATGACCCGATGAAAG CTGGTCGGGATAACGGTGAAAGCGATCGCAAAAGATCACATGAGAACCCG GATTCACCTTCtaacaataaaaaattcaaatTTGGAGATGCAACTTATGA AAGTTTGGTCCGAGACAACTCGCGCAAAGAAGATGAACTCAGAATTTTGC ATGACGGTTATCAACGTGAAATCAAGGATGAACGAAGTAAACGACAAACG GCCGAGCGAGTTTTAAACGAGTTGAAAGACCAACACAAACGAGAGATGAC AGAACTACGAGAAGAATTACGAAAATTGAAAGAGGAGAAGTTAGACAGCA AATTGAAAATCTTCCATCGAGGAAATGTGGATGATCACGATTCGCCTTTA AGTAATGGCTTCCATGAAGATTGATCTGGATACCACTCTATGGTCCTTAT GTTGGTCATGTACTTTCGTTCGGCTAAGGAAAGATTTCATGCATAGAATC ACGGATTTAATAAAGGCCCTCTAAAAATTAAATCTATGACAGAATCAACC AGAAGTTCTAGCCATTCCTACAGTATGTCCAATTGATTTACAATCATTGA TAATGAAGGTACTGGCAGCACTATCGTTCATTACAATGGATTACATAGtc aataaaaacattgaaatatgaGCGATGGGACATTTGTATCCTCGACAATG CCAAGGTAATCGATGGGGATTGTTTTGACAGAATTCAACTACATGCACAA CAGTAGCGTGGTGGATCGACCAAAATTcgggcaaactggggaggcaattt cagaaaattttgattttggcgctctctatcaaatgaaaattattaTCTTT TTGATCGAAAACTGCCAGGTGTAAAGGTGTTTAAAagcaaaggggcgccg aaattagtaatAAGAGGCGTCgccctgcccccccccccatgccaccacgc tactgacaCAATATTTTTACCCATAAAAACGAAAACGTGGATTTTCTTTG AAGATTACGAAGAAAACCCAATTTCCAGGTCACCACTAGAATTAACTGCA ATGTTAGAACTTTCACATACCCATATATTTCTATAGTTTATAATATCGTA gttaaagtaatgaaaattattttttcaatactggcagtttcatgttttta caaacAATCCTCAGTTGAAAATAATTTTTTTCAAAAAATTATTTTCAACT GAGGATTGTTTGTAAAAACATGAAACTGccagtattgaaaaaataatttt cattactttaacTACGATATAACGCTTCTAACTTCGGTTGGTTAAGCACT CTTTTGATGGATGAAAGCATTGCTTCAACAAAT Run BLAST on NCBI transcript from alignment at sc0000217:97476..103930- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015834 ID=TCONS_00015834|Name=TCONS_00015834|organism=Clytia hemisphaerica|type=transcript|length=6455bp|location=Sequence derived from alignment at sc0000217:97476..103930- (Clytia hemisphaerica) TTTTTAATGTCATTTCATTGAGAGGTATTATTCTTTTGTTTATTAGCTCA
AATCTCCTTCAAAACTGTTATTTTTTTCAATGTTTATTTTTCTATATATC
TTGACTGTGTTTTCTTAAACAAATAACTAAAAAAATTGACTTTAGCATCA
TTCACTACCAAACTCCATTACTCTTGAGTCAATTTGATGTTATATGTTTG
TAAGAGATAGTATAGTTAGGTAATACATTACATACACAATATAATACAAT
GCATAGTACATAGTACAATACATAGGAGGTATTTGGTTAAATAAGGTATT
AGGTTATGGTATTGATTTATGCTATGAGTTTCAAAATTTTCTGATCCCTT
GTGATTGTGAGTTTTTGTTCAGCTTAACCACGCCTCCTTTGCAAGAATAT
TTGTTTTTTTCCATAATATTTGGGAAAATACTAAGTACTGATGCCATTGA
CTTGTTTTGCCTTAGGTTGATTTGTTTATCTGATGGTTGACAACTCGGGG
TTATGATTTATATACAGAAAATTGGCAAAGTAGTCAAAAATATTTGGAAA
ATAACTCTGAGGATCTAAAAAACTGCGAAATTTCCTCTCTAAGGTTCAAT
TTTCAATCATTTGCTCAGACATACCAATCACCTTGAAAACCTTGCACCCC
TCCTTGGCTTGAATGTACTAATTTGCACAATGTCATTTTCAATTCATTTT
TATTTTCAGTCAAAAACGAACTACTAAAGATCAATGGAAGTACACAATCC
TGTTGAATACCATCATGGACCAACCATGGAGAGACCATATTCAACACGTC
ACGAATCTTACTACTCAAGTCGACTCACAATGGATGATTCCGAAATTATC
ACACTTCATCCTCTAATCATTGGAAAAGACATTGTTGTCTGTATGCCAGA
AGTTAATAAAGTGTTACGTAATGTATACCAAGTCTTATCACAAGCCAATT
ACTATTTATCTAAGCATGGGATTACATCTCGACGATATACAGGCGCCCAG
TTGATCCGGATCAAAATGTTGGGCATTTTAGGACATGAAGCCAAAGTTTG
TTCTTATATTTTGCAAAGAGATGCTGAGAGGATTTTCGATAGTTTTGACG
TCAGTGGAGACAGCCGTAAATCCACCCGTATCCAGTGGATGGAGCCCGTA
TTATTAGATGAAAAACCGATGCCTCAATCTACGACCCGTAGCAATTCATC
CACGAATAGCAAGAACGATCAGCAGCAGGACGGCCCGGTCAAAGTTCATC
TTTTTAAACTGAATGACGATATTATAGTCTGTGCACCTGAAGTTCAAAAA
GTAGTCCAGTCTAATTTCCACCAAGGTGCAACAGTCGGTTATTATTTCAC
CAAACTTGGTATTGTGCCTTACAAGTTTATCCATACATCACATCTAGATA
AGATAAAGGAACTAGGAATTGTGAAGAAATGCGCAGTCCATTGTACTTAT
ATTTTGAAAGATGACGCATTAAGAGTCTTTGAAGCATACGGTATGACACA
AGATCAAATTGAAAATCATGTTGAATTCCTTGATGTGATGGTGTTAGCTG
AAGGAACCTCCAGATCGTGGAAAAATAAGAAAGAACGTTCATCACCGTCA
ACAAGTAGCCTAGAATCACCGCGCGGTGGAAACTGCTTATCACCAGCCAG
CAACGTGTCTGACTACTCTGGCAAACATGATCTAGAGACCGAGGATTATG
CTCAAGCCTCTGATAAAGATATGACTGTTCATATTTTCATTGTCGAAGGA
AATGAAGTTGTCTGCATGCCTGATATCCATAAAATTGTTCAAAATATCCA
CGGCAATTCCATCCAAGTCAATTACTACTTTAATAAACTCAAAGTTCAAA
AACGCCGTTTTTGTTTTGCTCATTTACGTGAACTAAAGAGTCGTAATATT
TTACAGAACAATGCAACGTATTGTACTTACGTGCCAAAATCAGATGCTGA
GAAACTATTCCAGATTTACTGTTTGGTGGATGATCCAAAGTTGAAAGGAG
TCCAATGGTCAGAACCAGTGAACTTGGATAACAAAATCTCCAATTTAGCG
TCACCGACACTATCAGAACCAGATACCAACGTTTTTGATGACAACGAAAA
AGAATTAGTGGTACATACGTTTACAATGGAAAATAGTACCGTGGTAATTA
CAGTTCCGGATGTTCACCGGGTTGTAGATTTCCTTGATGAACAGAGCGCA
TCTCTTGATTACCATTTCCGGAAACTCGGTATCGCGAAATGTCGCTTTAC
ATACGCTCAACTCCATCAATTACGCCGCCTCAACGTCATTAAACGTCCAA
CCGTATGTACGTACATTGCCAAACATGATGTTAATCGCTTGTTGAAAATG
TATGAGACCGAACGTAACAGACACCGGATGAATAAAGTCAAATTTTTACC
ACCGGTACAGCTAGTACGCGGAACTCCCCCTCAACAACAAACCGGAAACC
CGAAATACATCAAACGTGAAAAATCACCTCCTAAAATCAAAACTAACGGT
CGACAGTCGCCATCGCCCACCAAGGTGATGTCCCCCTACCACCAGCCCGC
GTCTCCTACCACTGAACGAGCACCTACCAGTTTCACCAAGCCACCTACCT
CCTCCCCACCCAACCCACACCAAGAAGAAGACATGCCATCCTCACACTCA
GTCGCTATCACGCACATTCAAAGCATCCATCCAACCATTGATTGCCCGAT
TGTTATCCCGAACGGAGATTATGACCCGATGAAAGCTGGTCGGGATAACG
GTGAAAGCGATCGCAAAAGATCACATGAGAACCCGGATTCACCTTCTAAC
AATAAAAAATTCAAATGTACGTAAAAGATTTGTTAATTTAACAATTTTGT
GCATAATGAATATGGATACTCTTAGGTGCCAAATAAACGCCCCCCCTGCT
TGTTAATTTTTCGAAAGTTTTTCAACCCCCCGGACCTTATTAGGACCACC
CCCTCTTTATTAATTATTACAAGAATATTTTCAGTTGGCAAAAAGAAGTC
CCTTATTTTGCTTTTACTTATGTACCATTTAAAGTGCTTTCGCGGTCGTA
TTGGGTCTAATCATCAGCAAGATATCTGTTAACAACGTCATCTAATTCAA
AATCAACCTTGTGTAATCGAACAGGCTACATCGGTTATTTCAAAAAATTT
TACTTTATTTTTTTAGTTGGAGATGCAACTTATGAAAGTTTGGTCCGAGA
AAACTCACGCAAAGAAGATGAACTCAGAATTTTGCATGGTATGTGATCTT
GTCATTGATTTTATTCGACAATGATATTGTCCGTAAAGATCAGTTAATAT
TCATGATATACACCCTCCCACTGGCCTATATTGACACCTTTTTAACTTTT
AGCCGCTATCTCTGATCGGAGTTTCTACAAATTGGCCCTTTCATGGTCGG
NAATGTCACGTAATCTTAGGCCAACTTACTTATGTACCATTTAAAGTGCT
TTCGCCGTCGTATTGGGTCTAATCATCAGCAAGATATCTGTTAACAACAT
TGTCTAATCGGTTATTTTAGAAAATTTTACTTCATTTTTTTAGTTGGAGA
TGCAACTTATGAAAGTTTGGTCCGAGACAACTCGCGCAAAGAAGATGAAC
TCAGAATTTTGCATGGTATGTTTGCTGTGATCTTGTCATTGATTTTATTC
GACAATGATATTGTCCGTAAAGATCAGTTAATATTCATAATTTACACCCT
CCCGCTAACCTATATTGACTCCTTTTTAACCTTTTTAACCGCTATCTCTG
ATCGGAGTTTCTACAAATAGGCCCTTTCATGGTCGGAAGGAATCATAGGT
AGTCAATACCACCGTGCTCTAATAACGACTTTCTATTGGGCCAAAATTGC
CGTTTTGGGAGTGCAGTTAGTCCTTATTACCCATGATTCATTTAAACCGT
GAAATGGTCTGGTGTTGCATTTGGTGGGTGTAGGTACATTTTCCCATCAC
ATTTAGGCAGCACTAACATTGAGAAGTGTCTTTTTCAAAGAATTCCTGTC
AAAGATTTTATTTTGGTTGGCTGGGATTTAGATAAATCTTAGTGTATTTA
CTACTAGAGGGTACAACTCATTTTTTTTTCTGTTGTAGACGGTTATCAAC
GTGAAATCAAGGATGAACGAAGTAAACGACAAACGGCCGAGCGAGTTTTA
AACGAGTTGAAAGGTAAGAATGACGTAATCTTTCGGAAACACCAAAAGCA
CCGCTATAAGGTAGTCCGAAAATCTATTTAAAATCCGGAGGCTGACTTTT
CGAAAATGACGTCCTCAACAGGATGGAGCCGGATAAAGAGTTTCCTTTTT
TTATTAATTCTATATAATTGTGGTCTTCTATTCATGATATTCATGACGTA
ATGTTTTTTACGGAAATACCCCGATTTTAGCCAGTTGTGGTAAATTTAAA
CTAGACAAAAGTTGTATAGAATTTTCCACAACTGGCAAAAACCGGAGTCT
TTCTGTAGAAAACATTACGTCATGAATATCATGAATTGATAAGCTTGTAC
CAAGACAGCTGTTCTCAAAGCTGTTCTGATGCTCATTTTTTTCGACGTAC
AATATGCATAACCATTATAAAAACAGGAAACGATAATGGGGGCTATTAAT
ATTAACTAAATGGGTTGTCAAATTTGTATTTGTTTGTCTCTGACGCGAAG
AAAATTTCTGGGTCACGAATTAGACACTTTCTCGCCGACGATGATAATAT
TTTAGCTATTTCGGACATAAAATGAAATAAGAGTTCTTAGAATTCAGAAT
CTAGTGGCAACGAGGGATTGGATTTCTTACAGGGGAAGATTTTTGAGTCG
TTTTTTATTCAATAGAAATCCTACCGGGGTCTATGGCAAAAAGGGTTTAG
TGATATCCTACACTGAAAAAACAAGAGTACTATGTAACTATATATTATTT
GAATCTCTTTAGACCAACACAAACGAGAGATGACAGAACTACGAGAAGAA
TTACGAAAATTGAAAGAGGAGAAGTTAGACAGCAAATTGAAAATCTTCCA
TCGAGGAAATGTGGATGATCACGATTCGCCTTTAAGTAATGGTAAGTGTC
TTCACCACAAGTCTTCCCATTAGAACGTCCAGACAGCGTCCATAATGCCA
TGGCCCCCCCCCCACTTTTTTGCTAAGAAAAAAAAACCAACCAACCATGG
TGGCGCCTCCTTAGACACTTACTATTTGGCCCCTCCACTTTCAAAATTGA
TTCGCCGGCCCTGGCCATAGGGGTGTGACGAATGTGACAATCTGACCTGG
TCAAAACATTTAAAACCAGTCTCAAAGTCCTTCTAACGTTTATAAAATCC
GTTAAACATTAATCTCATAACAGATCACCCATTTTACTCACACCACGCTC
TGCTCTAAAGAGATATGGCAAATGTGACGATCTAAGCAGGATGTTTAGCT
AAAACAATCATATAAACCACTAGTTCCTTACCCATTTGAAATGCAAGCCT
ATCATACCATCACCATGGATAAAAAACTGTATTTTTTTATAACTTTTTGT
AAAACTTTCTTTTTCTTCATTATGTGTAGGCTTCCATGAAGATTGATCTG
GATACCACTCTATGGTCCTTATGTTGGTCATGTACTTTCGTTCGGCTAAG
GAAAGATTTCATGCATAGAATCACGGATTTAATAAAGGCCCTCTAAAAAT
TAAATCTATGACAGAATCAACCAGAAGTTCTAGCCATTCCTACAGTATGT
CCAATTGATTTACAATCATTGATAATGAAGGTACTGGCAGCACTATCGTT
CATTACAATGGATTACATAGTCAATAAAAACATTGAAATATGAGCGATGG
GACATTTGTATCCTCGACAATGCCAAGGTAATCGATGGGGATTGTTTTGA
CAGAATTCAACTACATGCACAACAGTAGCGTGGTGGATCGACCAAAATTC
GGGCAAACTGGGGAGGCAATTTCAGAAAATTTTGATTTTGGCGCTCTCTA
TCAAATGAAAATTATTATCTTTTTGATCGAAAACTGCCAGGTGTAAAGGT
GTTTAAAAGCAAAGGGGCGCCGAAATTAGTAATAAGAGGCGTCGCCCTGC
CCCCCCCCCCATGCCACCACGCTACTGACACAATATTTTTACCCATAAAA
ACGAAAACGTGGATTTTCTTTGAAGATTACGAAGAAAACCCAATTTCCAG
GTCACCACTAGAATTAACTGCAATGTTAGAACTTTCACATACCCATATAT
TTCTATAGTTTATAATATCGTAGTTAAAGTAATGAAAATTATTTTTTCAA
TACTGGCAGTTTCATGTTTTTACAAACAATCCTCAGTTGAAAATAATTTT
TTTCAAAAAATTATTTTCAACTGAGGATTGTTTGTAAAAACATGAAACTG
CCAGTATTGAAAAAATAATTTTCATTACTTTAACTACGATATAACGCTTC
TAACTTCGGTTGGTTAAGCACTCTTTTGATGGATGAAAGCATTGCTTCAA
CAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00015834-exon-sc0000217-1575043694:103907..103930 | TCONS_00015834-exon-sc0000217-1575043694:103907..103930 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1575043694:101115..103221 | TCONS_00015834-exon-sc0000217-1575043694:101115..103221 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1575043694:100316..100387 | TCONS_00015834-exon-sc0000217-1575043694:100316..100387 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1575043694:99768..99842 | TCONS_00015834-exon-sc0000217-1575043694:99768..99842 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1575043694:98890..99018 | TCONS_00015834-exon-sc0000217-1575043694:98890..99018 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1575043694:97476..98401 | TCONS_00015834-exon-sc0000217-1575043694:97476..98401 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1510915933:103907..103930 | TCONS_00015834-exon-sc0000217-1510915933:103907..103930 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1510915933:101115..103221 | TCONS_00015834-exon-sc0000217-1510915933:101115..103221 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1510915933:100316..100387 | TCONS_00015834-exon-sc0000217-1510915933:100316..100387 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1510915933:99768..99842 | TCONS_00015834-exon-sc0000217-1510915933:99768..99842 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1510915933:98890..99018 | TCONS_00015834-exon-sc0000217-1510915933:98890..99018 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1510915933:97476..98401 | TCONS_00015834-exon-sc0000217-1510915933:97476..98401 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1491911889:103907..103930 | TCONS_00015834-exon-sc0000217-1491911889:103907..103930 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1491911889:101115..103221 | TCONS_00015834-exon-sc0000217-1491911889:101115..103221 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1491911889:100316..100387 | TCONS_00015834-exon-sc0000217-1491911889:100316..100387 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1491911889:99768..99842 | TCONS_00015834-exon-sc0000217-1491911889:99768..99842 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1491911889:98890..99018 | TCONS_00015834-exon-sc0000217-1491911889:98890..99018 | Clytia hemisphaerica | exon |
TCONS_00015834-exon-sc0000217-1491911889:97476..98401 | TCONS_00015834-exon-sc0000217-1491911889:97476..98401 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000217 | supercontig | sc0000217:97476..103930 - |
Blast
The following BLAST results are available for this feature:
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