TCONS_00015974 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015974
Unique NameTCONS_00015974
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1014

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015974 ID=TCONS_00015974|Name=TCONS_00015974|organism=Clytia hemisphaerica|type=transcript|length=1014bp
ctttaatACTCTTATATATGTAGGATCAGATGAATTCAATGATTTTAGCA
TTTGCGGTATAAGCAGATGCGGTAAAATATACAACCCAACTCGTCGTATT
ATCGGTGGAGTTGACGCGTCTGACGGAGAAATTCCATGGCAAGTGTCTTT
TCAGAGAAATGGAGAACATTTTTGCGGAGGGACTTTAATCAGTAAAAGAT
GGATTATAACAGCTGCTCATTGTCAAATTTGGCGGACTGATGAAGCTGTT
CTGGATGCATTTGACCTCGCTAATAAACATGATGGAACGAAGTTTTCCAT
CAAGACGGTAataaataaccaaaattatggTCAACCTTTACCGTTATCAT
ACGATATTGCGTTGGTTGAATTGTACAGAGACGTAACATTCAGCACAAAT
GTTCGACCTGCATGCTTGGTTGGCAGACACGAGTACCCTCATGTAGGAGA
AAAGGTTATCATTTCTGGTTGGGGGCTTAGACGACCAAAACCTTTCCCTC
CCTATTATCGCAAAAGGGTTCCAGATGTTCTCCGAGTAACCGAGGTATTC
GTTGACAGTGACAGTGTCTGTAGAGCCGCCCATAGCAGCTGGTTTCCGAT
TATCTATCAGCATTACACACAGTGGAATTATAATGAAAGAATTCATGATG
AATCAATGCTGTGTGCTTCTGGAACTTTCAACCATATTGATCCTGATTAC
GGTCCGCAAAATAAAGATTCTTGTCATGGAGATAGTGGCGGTCCACTTAT
GTATAACTTACATAGTAATCAACAGTATTATTTGGCTGGTATTGTCAGTT
GGGGAACATCTGGCTGTATGGACCCAAAACAAGAACCAACTATTTATACA
GATGTTGCCGCCTTAAGAGGCTGGATTGATAGAACATTAGCTGGCTATGG
TGTTTACCCAGCATTCTCGACTGCTTCAACGAGACGTACAACAGctagaa
ataacTGTGAAAGACCATCTATTTGGAGACCAGcgACAACACGACAACCA
GTCACACAACCACg
Run BLAST on NCBI

transcript from alignment at sc0000224:194170..212375+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015974 ID=TCONS_00015974|Name=TCONS_00015974|organism=Clytia hemisphaerica|type=transcript|length=18206bp|location=Sequence derived from alignment at sc0000224:194170..212375+ (Clytia hemisphaerica)
ctttaatACTCTTATATATGTAGGATCAGATGAATTCAATGATTTTAGCA
TTTGCGGTATAAGCAGATGCGGTAAAATATACAACCCAACTCGTCGTATT
ATCGGTGGAGTTGACGCGTCTGACGGAGAAATTCCATGGCAAGTGTCTTT
TCAGAGAAATGGAGAACATTTTTGCGGAGGGACTTTAATCAGTAAAAGAT
GGATTATAACAGCTGCTCATTGTCAAATTTGGCGGACTGATGAAGCTGTT
CTGGATGCATTTGACCTCGCTAATAAACATGATGGTAAATATTTTTAATC
TGTTCTTTTTCGTTTGGgatattttaagatatttgCATGATTAGTTAAAA
GGGAAGagtttggttttcaaatttgaaaattcaggaATAAGTGTATAACA
CGGCATATTTTGATTGGCTCGAAAATTCTCCGACGTTTTTGACCTAGTAC
TTCCCGATGGTTTTACTAATTATGCTAAACGCTTTCCTGAGTAGAAGTTG
GCCTGGAAGAATTTTCTCTTGACGAATTTAACCCCAGTTAAAAGATATTC
CAACTTTTGATGTGTATATTCctctttttataatttgatgaaaCGAGTGT
TATTATTGCCTGGAAACAAGCAATTTTACAGAGCCCAAAATTACCATTCT
GACTAGTATTAGATATAAGCatgaaatgtttttcttttcctttttctaac
caatcttgctccacatctgtgtcaatccaatgtgaaaaagcttgtgaatt
aaaattgatgagtaagcaaacgatatcactcttatttaaaaagaaaacca
ttaaagtcaaaatttcagCATGTAAACATCACTTTTTAGGAATTTCTCAA
AACACATTAATGCAATATTAAAAAgctatacaccgttggaaagatatttc
caagggAAATAATCTAATAGTTTAaagatttctgaaaaattgaaaaatga
agaagaaaaatgaagactttttctactggttcaaaaatcatttcattaAC
CAATATTTGAACCTTACAAATCTCTGTTcagattttttgttgtttttttt
ataaaaagttatagcACTGTGAAATTAGgtaatttttgctgtttttggta
attttcgCTGTTTTAAGCCTACATCAAAGGATTGTAAATTTTTATCCAAC
GAAGATACGAAAAGTCCGTCAATaaacagttgacactctctaattcgata
ttcaaggggaattggataagGGAGGCTATCGGATAAGGAagtgtcgttta
tgagagtttcttgttgacggggactttaaatttcatcaaataagagagcc
tatcgaatagtagatcGTCGAATTAacgagcgtcaactgtatatcaCCGG
TGATCATTGAACATAACGAAAGGCTAATCAAAATCTGCTCAAGAACAGAT
CCTTTCATGTAATTCGGAGGTTACCCGAAAGGAAGGGGTACCATTCTGTC
TCACTAAACTACCCCATTACCCTTGAACCACCCTTCTTTATAATTGCTGA
GCGTCAAAGAGAAGGGTATCAATTACCATTTTGTACTAAGTACCAAGTCC
TTTGTCTGACCAAGCTGAGGATATTGAAACCACGATCTTTTGCACCGTAG
CCAAACGTCCTACTTAGTGACAGGCGCCGAGGCATCGGGGGGGAGGTTCG
GGCGGTGGCTGCCCTGCCTTGTTTAATAACGTTAAAACAAACCTGTTCTA
GGCAATCTATAAGGGCTAAAATTCTGAGATTTTCGCCCAATGGCGCCTCC
TTGGTCAGTATATCAtggccctatcactttcaaagtggagccATGGCCTC
TGAGTGAGctcaatcaaatcattttcatcattttcttcattACTTTCTAC
AAATTCTATATTATAGGAACGAAGTTTTCCATCAAGACGGTAataaataa
ccaaaattatggTCAACCTTTACCGTTATCATACGATATTGCGTTGGTTG
AATTGTACAGAGACGTAACATTCAGCACAAATGTTCGACCTGCATGCTTG
GTTGGCAGACACGAGTACCCTCATGTAGGAGAAAAGGTTATCATTTCTGG
TTGGGGGCTTAGACGACCAAAACCTTTCCCTCCCTATTATCGCAAAAGGG
TTCCAGATGTTCTCCGAGTAACCGAGGTAAGTTTTGTAATTCATAGTGtg
tcttttaaattttaaaatcaatttcaaatttgCTCTCACGGTTttctggt
ttttcctataaaaagctcGAAGAAAATTGCGACAAAGGGAACAATTTAGT
TCaaagttgaaaatgaatttCATATTATTATCAGGTGACTCAACAAGAAG
TTTGGACGTTTTTTGACCAACTTAGTTAAACcgaacaaaattttgattta
acccAAAGTTCTTTGCTAGAAATAGAAAGAGGATAGTTTAACTTTATTTT
CTAGGTATAACTTTTTATTACATTATAGTATTCAAATTCATActtcaaaa
agtgaaaaaagatgcgtatcaaaaagttataaacatcctaaggcttcatc
aattttggatgttctcataaaaaaaacgtgtatacgaACCATATATTTtc
tcatagtccgtataaaaacccCGGTCTAAaagctttttctttctttcaat
tGTTTCATACTTGAACatgcgttgagaaattagtttgttttgctaacttt
ttgatcatgtgattaaatcttaaaccaattcCAAGAGGAGTACTTGTAAC
GTGATcgaaaactgagcaaatcgattttcatcttttaataataacaaagg
aaaaactagcaaaaagttaaaacaataagtttaattttctattttttact
ccTTGAAAGGACGCTGTGAGCAGAACGGATAGCCCAGAAGTGTGTGAACG
ATAAGGGAAACCAGTGCATTAATTTTTGGCATTTGTTTATTGACTAACCA
CTCCTATACAAATAATTTTGGGGATAAAATATTTCCCATATTTGACAATA
ATTATAATTTATTGTCGaccccaaaaaaatatcagcgttttgattggtgg
agagcatcaagatatttgcaatattttatatttctctagtatggaaatat
gacccccttttgggggactgggtaagcagcgggagaaaaatcaaaacaaa
acagccgaaaagaactgactttcggagaaactgacttgggagtcaaatgg
aaaaacacaacaaaaatattttcagatgaccttttactttggagtttttc
cataaaagacactaaaatcaaatctgatgaactaagaaattattataaaa
ctacttgaccaaatattttcagctttcagTGTAAAATTCGTCCGTGTGTG
ATATCCAAACAGTTTTATATCAATACATAAGATGGCCGCCTGCAACCATG
CTCGCAAGCTTTGAAGGGAGGGAGgaaggtaaaaaaataattttctctgt
CTTCACTGTAAGACGAGCTTCTTTGCGAATGGAAAATCAGTGCTCGAAGT
CATAGCTCTAAACCACCTATAGATTCTACCGAAAGGAGCAAATGCAACGG
GCGCGTACTACCGGGCGCGTACTACGGGCGGACGGCCTACCAAAGCCACT
CTAGCTAAATGCGCTAAAGGGCGTGGCGtcgtaacaaaataaaagttaaa
ctaaaatttaacctcttaaattaccacttccagaccagtgttttttataa
ggactatgATTTTCTCTTATCAGGTATTCGTTGACAGTGACAGTGTCTGT
AGAGCCGCCCATAGCAGCTGGTTTCCGATTATCTATCAGCATTACACACA
GTGGAATTATAATGAAAGAATTCATGATGAATCAATGCTGTGTGCTTCTG
GAACTTTCAACCATATTGATCCTGATTACGGTCCGCAAAATAAAGATTCT
TGTCATGTACACTgtctgcaccccaaaatgtgtgtgaaccccaaaatgta
ggtttttggtttgacgtccactgaaattttttcaacGTGTTTGCAGCCAG
AAAACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAA
CAATGGTTTAAAATGGAATTATGCATTGGGAAAGAATCTTTAGGTGACAA
ATAAGTGTTATTAGGCTCATTTTTGTATTTCCAATGTTTATTTGAGGCgt
cagaaagaaaacaaaattcatcgacattttggggtgcagacagtgtaagt
gtacccagctggcacacaacgttgtttcaacgttaatccaacgttatatg
gacgttagggacgttagatggacgtcaaaacaacgttgtgtgccagctgg
gtagtaCTCTTTTATGCTTAATTGTAgagggggtggaataagcaggaGGT
TGGTACTCTGGGAGAAAATCCATAAATAGGGGGGGTCAATATTGagtgat
tttggggtgattttcctaAGAACCCGttggaaaatgaaggttttggcact
tttttggaaaatttcataaaattgggAGGGGGGGGTTATTATAAAATACT
ATGGGgtgattttttccgaaaaattgcaaagttcaATATACTTCAATATT
ATACTAAGCAGATATATGTTCAATAGCttaaagttggttattgagattta
ttaactcGAGGTGATGTAATACTCAACAAGGCGAAGCAGAGTTGAATGTA
CATCACCGAGGTTTTTACAAAAGTTTACGAGGTTTTTATATGTAAGAAGT
TAAGAGTGCTCTACCGAAGGCGTATAATATCAAGAAGTTTTACGAAGTTT
TTATGTATCATCACCCACTCTTTACAAAAATGACTACAGTAATTAAAGTC
ACGGAGCAAATTTAAACCTGATTTCTTCAAATGACTGTTAAAAGTAGCCT
GGTGAACCAAGCAACTTATTCTCAGTGTAATAAAAATGAAACCGCATGCG
TACAAAATCCGTAAATCATATAGCGCATCGTAGCCTTTAAAATCATTGTT
GATGTTTGAATGCGAaagcttaaagggacataacagtacttgcgaaattt
accacaacatacaaagttctaaaatcatagagcttggtctccctagagaa
tgaaagtgcaaacccatgtttcctagccaacccagggcagccaaacaaaa
attaatgaaaagcagccttacaaaatctaaaaccatttaaaacaccCAAA
GATTACAACAAAGTTCTTAAACAAGTTTATATCTATCATCATGACAAACc
gtgttttcttggaaaataaaattgcctctgttttcttctttttcatgttt
tcatgtaacagaaagctctatcttcgAAGTGAgggcaagcaagcggactg
cattctgaTTTGAGAAGGCAAATTTCGTGTCCCGAGCGCAGGGTTAGCAG
TGTCTTGTAAGCGTGGTAATTTCCCTATCCTAGGGTAGGTTTCTTTCCAG
GGATAGGGCCCATTCCGGATGATACAGAGGGTTCACTTCTCTCTCTCTTC
TCCCCTTTGAGAAATTTCATACCAAACAGGATAGCTTATTTTTGGCACAC
CCAGTTCGTTCATAAAAAAGCCCCGGTATTTTGGCCCGGGgtgcactcaa
ggtaaacgacctaccgtacgtgcaGCCCTTCAGGATCCTTTtttcaagct
tcccaaagtgcgcTGTGTAAGGAttgaaatgagcaaagatgagaaaaatt
gcactctaagggtgtaaaaccATGTTTGACCGTATTTTTAAAATAGTCCC
AAATCTTCAAGAAAATGGACCGTAATGCTTGATTTTTCGCCCAAAATTTG
GGTAAGGGTCCAATTTCAAAGGCCTTATTTTGGTTACAAATACGGTCGTT
TTTAAGTCGAGTGCCCCCCTCCTCCCGGGTTTTATgggaaatgaaagaaa
atatgaTTCAGATCGTGTCATTCCTCAAAGcatagaggtaataaaagttA
GATGGAGTAACAACTTTTTTGTAATAGCCAAAGAAGtcataaaatttaga
aatttctttcaaatcggcctcctttgattaccaatcattgatagcaaaaa
tcagtcaggATATAGATTATAAAAATTATAGTAAAGTTATTCTGTCCAAC
GAAACCTCGTATTTTTATTCCctgaacatttcaaattcgattttcTGTAC
TTATTTTTGTgaggttttcttatgttttatcaAGAAAAAGTGTCAAGAAA
Actgtcatcacacaatgaacaaattaaaaatgtagcatgattttattcaa
attctcttcgacTTAAGTATTCCCATAAGTGGCttcgtttagaccaactg
gcatttgtaacttggcatttgctcatgagggattcgattttaatagcttt
tccattgtattttctgtcatggcatttaagaaatcgtctttttagagtca
ttactgaaaaggtgatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNaagttcaactttgacagatcaaacaattaa
aagcatggaatttctcaaaaactgcagtcattaagactgaaactttttgc
cgtagggctaggctatggcaaatcttgcaaattttacaatctatagaaag
aactgaataaaaaacgtgcaaataatttaaaaaatcaaaaatgtcatttt
tttatctttgttttggttcctttgtttgatttgaaatgccagaaaagggg
attcctttgctcaatatggcatttcaaatgccaacgaaatgccaacacgc
tggcatcattaggcatttgacaaaccgaacaattgcgcggaacaatagaa
ttcaaaagaatactgcaagcaattacaaatgctaggctggtctaaacgca
gccagtgaaagcaaaattaatggccTTTCTCCCAAACcaacaaagcaaca
gtttgctatcaatGATATAATACAATAGTAGAAGTGATATCTCCATccat
atttttattacctccatgctcaaagtacagggtgtcccgaaaaaaagtat
ggagctcgaacatgattctgagtagatggctgttgctcgtgtttaacaaa
atataagaaaatatataccaacacaataatCTTTTTACAACAGTCAACAG
ATTTAGTGAAAcgcacacaagaactttctttctatagaagtggtacgact
cgatactttttttccggacaccttGTAGATTATTATTTTCCAATGTTGTC
GTACTCACCGTtctctagcctggatatccaagctcaaaattttagaaaaa
aaaaaattacctcaacatacaaagttctaaaattatagagcttggtctct
ctagagaaagaaagtgcaaacccatgtttcctagtcaacccagggcagca
aaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTtcttatttttcatgttttcatgtaacagaaag
ccctatcttcactagcaactggaggactatcctatttttgctttagaatt
gctccgcgCTGTGTAGATTGACCCTTACGGCTTTAgtgaagtgagcgcaa
gcaagcagactgcattctcttaaagagaatgcatatcgctctagggagac
caggctgtaaaccagaacataaaaatatcaaaaactagactgtgaaatag
tttacagcctggatatccagactaaCCGTTCTCATGATATTGAAAAGTTC
CTAATATCTAGCAACCACGTGATAATGATAAAGCACATTCACGATTCTTG
AAAATGTAAAGATAGCGGTTATAAAGACCAATCATTTATTTTATAGGGAG
ATAGTGGCGGTCCACTTATGTATAACTTACATAGTAATCAACAGTATTAT
TTGGCTGGTATTGTCAGTTGGGGAACATCTGGCTGTATGGACCCAAAACA
AGAACCAACTATTTATACAGATGTTGCCGCCTTAAGAGGCTGGATTGATA
GAACATTAGCTGGCTATGGTGGTAAGTGAGTCACATAACAtgtccaaaaa
aaaatgaagtagtcaaggttctaagctaatagtataattttgacttttca
aaaaaagatgtgTACACATTGTACTATATTAGCTTAGTTGCAAACTAACT
CGGTAAAAACATTATCGCCTTTGCCGAAGACTTTTCGTATTCCCAAgtca
atcaaaatattttgttatcaaaggcaaaaataataaaatttatattattc
cCATGAGAGCAATTAAAGATGACAGTCTTTTTCTCTTTGCTTTGAACGcg
ttattttatcaaaacaatcagaaacGATAAATTGCCGTGTAAGTGCTGTG
TAATTAATCGTAATGCAGGTTTTTGGGCTAAAACTTATTATGGCCAGTAA
GTGTATTGacactgaaagttttaaaggggcataaaagtagtaaaatgtaa
acatagcgcgaaccacgtgtaattaaagagaacaattaaaatcccgtgtc
caaaacaaacttgtaaaacaagcTAACggccttaaagggacataacagta
cttgcgaaatttgtaaacaaactgtatgcagcggatacaaaatcaaaaca
aatttcacatgtcaaaataaaaaatcaaaccNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNcaattgttttacaagtttgtttt
ggacacgtgattttaattgttctctttaatgacacgtggttcgcgcaatg
tttacattttactactttaatgtccctttaacgtgtttaaattataaaaa
tggTTTGCACTTTCTTCTTTGATAATATCTTTGATAGATTTGAAAGCAAA
CTTACCACATGATAGTGACAAACTTTTGCTATTCAAACTTTTATTAgtgg
gaaatttttatcaaCATTTATGCAATAATAATCGTTTTGTTTGTCATCAT
AGTTTACCCAGCATTCTCGACTGCTTCAACGAGACGTACAACAGGTGGGT
ATCACTATTATTAATCTCAtattaacctgataacagatgttcgtaatttt
cttacgcgcacggtaaacctctgaaggcgcttgaaaatcatacatctgag
gaaaatagtcctcccgcggaaaattctacaacaagaatcttgttgtgcgc
cggagagttaaaaactgatacggcgccctattcataaacacaatcacgca
actttgttgtcgttcctagtccttttagtagaacgcggtccttacgattt
cgagattgcatattcgtcagattgttatgttttcacacatccctttagag
cctcagcgtggtgtgcagaaaacattcacaatctgaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNcaattgttttacaagtttgttttggacacgtgattttaattgtt
ctctttaatgacacgtggttcgcgcaatgtttacattttactactttaat
gtccctttaacgtgtttaaattataaaaatggTTTGCACTTTCTTCTTTG
ACAATATCTTTGATAGATTTGAAAGCAAACTTACCACATGATAGTGACAA
ACTTTTGCTATTCAAACTTTTATTAgtgggaaatttttatcaaCATTTAT
ACAATAATAATCGTTTTGTTTGTCATCATAGTTTACCCAGCATTCTCGAC
TGCTTCAACGAGACGTACAACAGGTGGGTATCACTATTATTAATCTCATA
TTAACCTGATAACAGATGTTCGTAATTTTCTTACGCGCACGGTAAACCTC
TGAAGGCGCTTGAAAATCATACATCTGAGGAAAATAGTCCTCCCGCGGAA
AATTCTACAACAAGAATCTTGTTGTGCGCCGGAGAGTTAAAAACTGATAC
GGCGCCCTATTCATAAACACAATCACGCAACTTTGTTGTCGTTCCTAGTC
CTTTTAGTAGAACGCGGTCCTTACGATTTCGAGATTGCATATTCGTCAGA
TTGTTATGTTTTCACACATCCCTTTAGAGCCTCAGCGTGGTGTGCAGAAA
ACATTCACAATCTGATCTCAGGTTATCTCATATTAGATGATCTATTCTGC
GCATGCCTTGCTTCAAAGGGATATGGCGAATATGAAAGTCTGATTTGGTT
GTCCAGCCGAAACATTCAAAACCGCCTTGCTTTTTACTTGAAAACTAAAA
GTGACAGCGACTCGgttttatgtttatgtttgcGATTGACTTTTGATTTT
GGTGCGATTGTTTACCTTCAGCCAATCAGCGCCTCCTCGACTCGTATTTA
CTTTACAAAAAACGTCAGGTCAGTGGGAAGAGTGtggaaattagcgtttt
ttgtGAAGAAGCCACAGTGTCAATCTTTtcacaaatttaaaaacccactt
gaaataattgacatttttttctttttttgggtCCCTTAGAACATTTGCTA
accgttgaccgcaaaaatttaataatttgcgaatttagtagggggccaag
cctggggtcccgtgacatcttttttgcGACCTGAtgattggaaaatgatt
gataccatctgaaagagcatgaaattctgagcaaaaatgTATTACATCAG
CTCTCTGACTCGAACGCAAAAAGAAATACAACCtcttgaagttcaaaaac
atatcaacgtcagtacgatcaagacaagatttgacgtcaaatcacaccag
tagagctgacagttagttggtcttaatACATGTATATATCTATACATTAC
TTAATCTTATAGTTTTCTTCTTTCGAGTTAGCAGTATTCAACTCTACAAT
TTCTCATCATGTTCAAGTCTTAGCAACGTTTTTCGGGTCGtgtcagtttt
tttttgtttttttttcttggcACCTCACTCACTTTCAAAANcttgaagtt
caaaaacatatcaacgtcagtacgatcaagacaagatttgacgtcaaatc
acaccagtagagctgacagttagttggtcttaaagcggctgtatttcctt
atgtgttttagtcagagagttgctgtaatacattttttggcTCAGAATTT
CACGCGCTTTCtaatggtaccaatcattttcgtttactttgacttttgaa
aatcagctattttCTACCCCTCATTTTCCctttgcagttttgcctatggc
gtcactattttggtcataaaaagttttcccgggcctaatccgcgtccccc
ctctcaaaaatatcttgtaatgtactgttctttggaatagactaaaaatg
gctcaATCGTAAAAAAGTTGTCACgggaccccaggcttggccccctacta
caatccgtgccataatatatttgcacttttggctaatttaccatttttcg
aaaattgaagttcgagcgagaatgtcaattttaggccctccacttgattt
catcgattatttcgatctgggagggatttattggtttctaggctatattt
caagccctactggaccatttttgaacttttggatcctcagatcctaaggt
cctaagtcttaagtctagcgttaaaactcagagttaaaactgtacccttc
gaacctactttagagcacttacaaatcgattgtggtttcaaaacaccccg
gtgaaattcccttttgtgccaagtattttgtccctgattgtaatTACGAC
AATCAATATTATAAAGAATTGAGAATCAGGCCCTGGGAACAAGGTTGATC
CTTAAGGTTCATCATTGCCAGCATTTTATTCACAAGAACCATCTTcacca
gcattacattcaccagaactatCAAATCCATCTTCAGAATCCAGCAGAAT
TAATGATATTTCTAGGTTGCAACAatcagggccaccattttcaaatattt
ttcagttttgttgtcattttttttagtttcgtcTTTAAAGATTAAAGGAG
AATCTAAATGGCACTAATGCTAATGGGCTTCCCATAGTGATCGATTTtgt
tttgatcaatttttgtCTTCTGTTGATCGATTTTTTTCGGTGATCATTTC
TTTTGGGCCTCAATATTTTTTGGGTATCTGGTATCAAAtttcataccctt
agagtgttTATCccgaaacacacccttacagtgcattttgggatgctgaa
aaactccacccttaagcgcggcacatgacgtaggccagatcatatgagtg
cccccccctcCCCGGTGTATTCATTCTTGGCACCAGGCGATCGATGCTTA
ACAAAGTAATTCCTTTCTTTAACTTACTTTTGGACTAAATCTGTTGGTAG
CATCAAACATTTGATTCAGAATTCGAAAAAATTGTTAGTACAGCaaaggg
ggacccttgatagATTCTATCGATTAACTGAAAATCGTTTCACTCAAAAA
ACTGCAGGAACTTCTACATCTTATtgggagcataatatcaaaaatttgcc
ctggtCTAAAGGGTGAGACAGTTCATTACTTCGGCCATTACCTTTCAAAC
ACTAAAGTTGTATTCAATGAGCCTCAATCAATTATATTTTCCCTTTCTTT
TCATAcatttcagctagaaataacTGTGAAAGACCATCTATTTGGAGACC
AGGTAAAGATTTAatcatttaattattttaagTCCATTCGCTGTTAGTAT
GTTGAACTACTAACACATACGTATGTGTTTTCTGTTTAACtcttacatgt
ttttataagcattgcacgtataagcatatctaggctcagatatgacAAAA
ATTTAAGCTTATGCTAAGCATTACCTTGGGCATAAGAAAACTCTTTctga
ttttggttgtttttggcTGGGATTTTACCGTATTTTAGGAATTCCCCTAA
AATTTTGCCTTTGATATAAGCATCCTTATGTACTTTTCAGCCTTGTCAAG
CGCtcaaaaaacatgtatttacTACTGATTGGAAATTAGTAAAGGGATAC
ATACACTACATGGTATATTGTCAGGCGATAATATGGATACTTTTGTTGAG
TGCCGGCTTTAGAGTGTGGAATTATTAAAATGATGAACAGTCTACCAAAC
TTTGTACGGATGTCAACCAAATTTAGTAAAATCTCAATAAAAGATAGCTA
TTCAGTAGTCTGAATCGCCGACccctatagatatacttcctataagaaac
tcttttcaCTAGAGGATGAGCAGTCCAGCTATTGAGTAGTCTGAaccgca
gacctctacaaaaccgcatgtagtataggtctgcttaatgatttaccaac
cgctttccggttcgcaaaggaaatcttggtgagttaataccttaagggaa
gaaattttcgcggaagaaattttcgcggaatttaatttcgcgaatttggg
cgtaattcgcgaaattaaattccacgaaacacaccaaaattgttaattcg
cgaaattaaattccgcgaaattcgatttttcttcttcttcttttattttg
ttgtttttgaccaggtattacaAAAAAAGATGGACANcacgaaacacacc
aaaattgttaattcgcgaaattaaattccgcgaaattcgatttttcttct
tcttcttttattttgttgtttttgaccagatattacaaaaaaagatggac
aaattgatttttaagcattattacgtgtattttttatcaaatataaacaa
atataaacaactccgtgatgcttaaaagttaatctaagttgataaattct
tcttattcgcgaaattaaattccgtgaaatttgccattttgaaatttatt
ctcgcgaaaatttcttcccttaaccctttaagtgccgatgtcgtatatat
acgacatgggctatataggagggcgaagccctcctgtaatgcccagtttg
agttagaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNaattccttctagatcaggagatataagcccttaaa
gtttgaactagcgattttttaaaaaaaaacttagaaaaaaggaccctggc
actcaaagggttaaagtttgaactagcgattttttaaaaaaaacttagaa
aaaaggaccctggcactcaaagggttaaggtaatttgattgacattgatg
cgcccgcaaaaacgatcgtttcgaacgttttcaatggaatgtttcgaaat
tcgaatcccagaccagaaaaacaaaacagaaaaaagataaaaaacaatct
gatgcgcgcattatgtacagtctgtagatttttttttgacttttgctttt
ataagatatctggtctataaatttatcaaaacttttccatcagctcttcg
gtcgaaaaatatgaacaaatatgaacacaaaagtgaaagaaaacaaccag
aaacactccaatctcttcaaagaattgaagttaagtacctgaaaagatac
gaaggccacacagtattaaaaagtgaaatgccaaagctgaagaaaagttc
tttctttgttttaatatttaaaggcccttgttgaaggaacaacaactTTT
TTGTCCAtaagaagtaatgtcagaaatattcaatatcacccccaaaatga
aatgtatatacataactagaatacctggaaataatctgcaacatatctgt
agaactgacaaaacaattatctggagctaAAGTGATCAACGAACNAATGT
ACTTATCTTTTTATTGCTTTCTTCATTTATCTTTCATATCAACGCCAGGA
ACAAACACTGCAGACCTTTGCCGTAACAAAAACGATGGAACAAGACTCTC
AAATCCAAACAGTTGTTCGTCATATATTGTTTGCACGCACAGGCGAGCGA
CAATCATGAACTGTCCACCAAGAACATTGTATGATAGGAACTCTCGTAGA
TGTGATCATGAAAGACTCGTTCGATGCTCAGCACCAGGTAATTAATCTTA
TATTTGCGTGCTCGTTCAGATACACAAGTAAATGACACGAGTGTgacttt
tgagcaaatttaaTCACTTGATCCAATAGAGTTTTCACAGGACGACCTTT
CTTTGTATTATTGATTGGTTTAACTGGTTTGGGGGATTTAGGCCACATTG
ACTGTTTATTTTTCCTGAGAGTTGAGATTTCAATTAGGACAGNccttccg
cctactttttttacgaaattcaaatatattttccaatctatgatttgatg
cctcacagaaaatttaaacattacgttatgttatatttgtagacattcgc
cagctaaaaatgtctttagccgtatatcggctaaaggcggcaaatctctg
gacaNTGGACTATTATTTTAATTGATTCAGTTGTTTTCTTCCTTTATTTT
AGCAAGAGGTCGACAACCAGTCACGCAGCCACGTAAATACTTTATTCATC
TCATTGCCTAACTTTAAGCGGAGGAAAGTACCGGTAGATATTGACCGAGT
CTGTTCATTGGCACGTTACAATTGGTTGCAAGGGAATAGTTTTGATAGTC
TTTTTTGTTTAGCGCAGGTTTTCGTACATGGGATCGTTTTCCCTTATTCC
CTGgtctgaattgcagacctctacaaGACCGCAGAAGCACGAAACGGTTA
GTGTATGCCAGTAGCCTACTTCATCCCATAAAATTCTTTTGAGCCTGTTG
aaacagaaaagagaaaaaaacatacTTGAAAATCGACATTAAGAAATGCT
GAATTTACAGACGGGTTGGGCTACGGGAACTCAAAAAGGAATTGATGGTC
ATTTTTGAGCAACTCCTTTTTGTCTTTACAGTCTCAAGTGATTTAAAATT
TGATCTCTAACATAGATTTAAAGGTAAACAATTCCGTCTTCAGAAAACCG
CCAGATAGAAGCGATTAAATTCAAACCATAGCTACAGGTATTATCCTCAT
CAATCAAATGATAATGATATGGATCCTGGGAATAAAGTTAATAGGGTTTT
AATAGCATTTAAGGTATCTCCTGATTATTTCTCGAGTTTGACCAATCCGC
CAAGAAGGTTTTTTTCATAATGTACCTAACATTCCATTTGCTTTAGTGTG
CACAAATATCTGTTTTTTCCCCCACAATGCTTGCATATTTTAAACATAAT
ATATgctgttgaaaagataattcagagcaNAGGTTTTCGGCCAGattgag
ttttttattttccctGAGAGTTGAGATAATTAGGACAGTGAATCAATGTT
TCagttgttttctttctttttttagcgACAACACGACAACCAGTCACACA
ACCACg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008925XLOC_008925Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015974-exon-sc0000224-1491911889:194170..194453TCONS_00015974-exon-sc0000224-1491911889:194170..194453Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1510915933:194170..194453TCONS_00015974-exon-sc0000224-1510915933:194170..194453Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1575043694:194170..194453TCONS_00015974-exon-sc0000224-1575043694:194170..194453Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1491911889:196036..196295TCONS_00015974-exon-sc0000224-1491911889:196036..196295Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1510915933:196036..196295TCONS_00015974-exon-sc0000224-1510915933:196036..196295Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1575043694:196036..196295TCONS_00015974-exon-sc0000224-1575043694:196036..196295Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1491911889:197843..198025TCONS_00015974-exon-sc0000224-1491911889:197843..198025Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1510915933:197843..198025TCONS_00015974-exon-sc0000224-1510915933:197843..198025Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1575043694:197843..198025TCONS_00015974-exon-sc0000224-1575043694:197843..198025Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1491911889:202566..202740TCONS_00015974-exon-sc0000224-1491911889:202566..202740Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1510915933:202566..202740TCONS_00015974-exon-sc0000224-1510915933:202566..202740Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1575043694:202566..202740TCONS_00015974-exon-sc0000224-1575043694:202566..202740Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1491911889:203772..203813TCONS_00015974-exon-sc0000224-1491911889:203772..203813Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1510915933:203772..203813TCONS_00015974-exon-sc0000224-1510915933:203772..203813Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1575043694:203772..203813TCONS_00015974-exon-sc0000224-1575043694:203772..203813Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1491911889:207733..207771TCONS_00015974-exon-sc0000224-1491911889:207733..207771Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1510915933:207733..207771TCONS_00015974-exon-sc0000224-1510915933:207733..207771Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1575043694:207733..207771TCONS_00015974-exon-sc0000224-1575043694:207733..207771Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1491911889:212345..212375TCONS_00015974-exon-sc0000224-1491911889:212345..212375Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1510915933:212345..212375TCONS_00015974-exon-sc0000224-1510915933:212345..212375Clytia hemisphaericaexon
TCONS_00015974-exon-sc0000224-1575043694:212345..212375TCONS_00015974-exon-sc0000224-1575043694:212345..212375Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000224supercontigsc0000224:194170..212375 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.484789	0.709119	0.374252	0.0488196	0.0594332	0.140895	0.368298	0.397841	0.0742768	0.138006	0.0446506	0.0146758	0.0439661	0.0608789	11.812	10.8633	3.24228	1.40729	0.0468492	0.0735365	0.0639166	0.0311763	0.530584	0.459407	0.0709768	0.0633451	0	0	0.12229	0.274108
Blast
[Close]
BLAST of TCONS_00015974 vs. Swiss-Prot (Human)
Match: PRS27 (Serine protease 27 OS=Homo sapiens GN=PRSS27 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.312e-34
Identity = 94/302 (31.13%), Postives = 136/302 (45.03%), Query Frame = 2 
Query:   23 GSDEFNDFSICGISRCGKIYNPTRRIIGGVDASDGEIPWQVSFQRNGEHFCGGTLISKRWIITAAHCQIWRTD----EAVLDAFDLANKHDGTKFS-IKTVINNQNYGQPLPLSYDIALVELYRDVTFSTNVRPACLVGRHEYPHVGEKVIISGWGLXXXXXXXXXXXXXVPDVLRVTEVFVDSDSVCRAAHSSWFPIIYQHYTQWNYNERIHDESMLCASGTFNHIDPDYGPQNKDSCHGDSGGPLMYNLHSNQQYYLAGIVSWGTSGCMDPKQEPTIYTDVAALRGWIDRTLAGYGVYPA 913
            GS      + CG  R         R++GG D  +GE PWQVS QRNG HFCGG+LI+++W++TAAHC    ++    + +L A  L        ++ ++ V +N  Y Q    S D+ALVEL   V F+  + P CL         G    ++GWG               P +L+   V +     C         ++Y   T++ Y  +     MLCA          +    KD+C GDSGGPL+  +   Q +  AG++SWG  GC   +  P +Y  V A   WI R +      PA
Sbjct:   16 GSQRAKAATACGRPRM------LNRMVGGQDTQEGEWPWQVSIQRNGSHFCGGSLIAEQWVLTAAHCFRNTSETSLYQVLLGARQLVQPGPHAMYARVRQVESNPLY-QGTASSADVALVELEAPVPFTNYILPVCLPDPSVIFETGMNCWVTGWG-----SPSEEDLLPEPRILQKLAVPIIDTPKCN--------LLYSKDTEFGYQPKTIKNDMLCAG---------FEEGKKDACKGDSGGPLVCLV--GQSWLQAGVISWG-EGCAR-QNRPGVYIRVTAHHNWIHRIIPKLQFQPA 284
The following BLAST results are available for this feature:
BLAST of TCONS_00015974 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS271.312e-3431.13Serine protease 27 OS=Homo sapiens GN=PRSS27 PE=1 ... [more]
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