|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016087 ID=TCONS_00016087|Name=TCONS_00016087|organism=Clytia hemisphaerica|type=transcript|length=1076bp
aaaacaaaagtgcTAGCAGGGTACGATTATTATGCTTGAGACAAgcaaga
tacgagttttgattttttattgtttcaagtttttgaaggaaaaaaattct
ttaaaatNtaattttgaataaaaaacaaaagtgcTAGCAGGGTACGATTA
TTATGCTTGAGACAAgcaagatacgagttttgattttttattgtttcaag
tttttgaaggaaaaaaattctttactgtaaaatggcaataaaattttttt
gggtcaccAGGTTgcgaggtagggtcggtcgggtgacggcaaaccaacaa
ttttttaagtccagcctgaaCGGAGGGCTTAACTAGGTTATATCTCGAAG
GCTTTGCTGGTTGCAAATGATAAAAACAGCTCTAAAAATTTAAAGCAAAA
CTTTCTCTAGGAAAAAGGGAGCtcatttttcctttgttttggttGTTTGT
TTTAAACTCTCTTTTgactggtctatgaatttgatttttcagcCCGGGCA
AACTACCACATGACCATAAACAAATTCAACAGGACAGCCGCGTAGCGCTG
AATCTAATTTGTGCATCCTATCCACTGAGTGTATCTTCTTCTATATGCAA
GCACCTGGCAGTGTGAATGTTGTACATTTGCAGCACTGCaatccaaaaac
attttttcagatGGAGTTATGGCTTTCTTTCTCTGAAATTTGAAACAGGT
CATTTTAATGACAGGGGCAACATGGAAAAACAAACCAGATTGGAGCTTTT
TTTAATCCGAAAAAAAGGATAGTGAATAAGTATGTTTGCAATCAACCCAT
TTTTTCCAGAGTTACAACATTGACCATACATTCAGCAGAAAATTTGGCTT
CCAAAATTGGACCATAACAGTGGAAAAATAAACCAAGAATTTGACACCCT
TTAAAGTGCAGAAATCCATAACTTACTTAGTCGTATTTTTAATTTAGACT
ACCTGATTTTAGGCCCTCAGGGGTACCTGCTCTGCTATGTCAGTGAATTT
CAACTTGATAATTTCAATGAGAGTGGATGGAAAAAACCTTAAACGGACAC
AATGTGAGTGAAGTAAACGAAAACTT Run BLAST on NCBI transcript from alignment at sc0000225:411132..412207 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016087 ID=TCONS_00016087|Name=TCONS_00016087|organism=Clytia hemisphaerica|type=transcript|length=1076bp|location=Sequence derived from alignment at sc0000225:411132..412207 (Clytia hemisphaerica)
AAGTTTTCGTTTACTTCACTCACATTGTGTCCGTTTAAGGTTTTTTCCAT
CCACTCTCATTGAAATTATCAAGTTGAAATTCACTGACATAGCAGAGCAG
GTACCCCTGAGGGCCTAAAATCAGGTAGTCTAAATTAAAAATACGACTAA
GTAAGTTATGGATTTCTGCACTTTAAAGGGTGTCAAATTCTTGGTTTATT
TTTCCACTGTTATGGTCCAATTTTGGAAGCCAAATTTTCTGCTGAATGTA
TGGTCAATGTTGTAACTCTGGAAAAAATGGGTTGATTGCAAACATACTTA
TTCACTATCCTTTTTTTCGGATTAAAAAAAGCTCCAATCTGGTTTGTTTT
TCCATGTTGCCCCTGTCATTAAAATGACCTGTTTCAAATTTCAGAGAAAG
AAAGCCATAACTCCatctgaaaaaatgtttttggattGCAGTGCTGCAAA
TGTACAACATTCACACTGCCAGGTGCTTGCATATAGAAGAAGATACACTC
AGTGGATAGGATGCACAAATTAGATTCAGCGCTACGCGGCTGTCCTGTTG
AATTTGTTTATGGTCATGTGGTAGTTTGCCCGGgctgaaaaatcaaattc
atagaccagtcAAAAGAGAGTTTAAAACAAACaaccaaaacaaaggaaaa
atgaGCTCCCTTTTTCCTAGAGAAAGTTTTGCTTTAAATTTTTAGAGCTG
TTTTTATCATTTGCAACCAGCAAAGCCTTCGAGATATAACCTAGTTAAGC
CCTCCGttcaggctggacttaaaaaattgttggtttgccgtcacccgacc
gaccctacctcgcAACCTggtgacccaaaaaaattttattgccattttac
agtaaagaatttttttccttcaaaaacttgaaacaataaaaaatcaaaac
tcgtatcttgcTTGTCTCAAGCATAATAATCGTACCCTGCTAgcactttt
gttttttattcaaaattaNattttaaagaatttttttccttcaaaaactt
gaaacaataaaaaatcaaaactcgtatcttgcTTGTCTCAAGCATAATAA
TCGTACCCTGCTAgcacttttgtttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016087-exon-sc0000225-1491911889:411132..412207 | TCONS_00016087-exon-sc0000225-1491911889:411132..412207 | Clytia hemisphaerica | exon |
| TCONS_00016087-exon-sc0000225-1510915933:411132..412207 | TCONS_00016087-exon-sc0000225-1510915933:411132..412207 | Clytia hemisphaerica | exon |
| TCONS_00016087-exon-sc0000225-1575043694:411132..412207 | TCONS_00016087-exon-sc0000225-1575043694:411132..412207 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000225 | supercontig | sc0000225:411132..412207 . |
Blast
The following BLAST results are available for this feature:
|
