TCONS_00016199 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016199
Unique NameTCONS_00016199
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2378

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016199 ID=TCONS_00016199|Name=TCONS_00016199|organism=Clytia hemisphaerica|type=transcript|length=2378bp
CTATGATCAGATGATAACATTTTGAATCTCATAgagaaaaatgttaaaag
ttgctatctttttaagttttttggttCAGTTTTGTAGTTCAAATCATTTG
AAAGATGGAAATAATACATTTCGATTTGCCAATACGTTTGGTTCGAATAT
GGTATTGCAAAGAGCTCCTTTGAATTCAAAGTTATGGGGATTTGGTGAGG
AAGGTCAAACTGTTCAATTAAAGCTCGGAGAAAATACACAGACTTTCCGA
ACTACAGTTAAAAAAGATCAAAATGGGAATAGCACATGGAGCATCCAACT
ACCAGCAATGAAAGCGGGTGGTCCATATACAATCACAGCTATTTCGTTTA
TCAAAGGGTTTACTGTGACCATATCGATTgaaaatgtcttatttggtgaT
GTTTGGATGTGTGCAGGACAAAGCAATATGGAGCTGACAGTTCCCCAGGC
ATTTACAGGTGAGCTAGAATTGGCAGAATATGCAGATAACAGACCGAATA
TACGTATTTTCACCATCACACCAAAATACTCTTTGAAAGTACCGTTGGTT
GATTTTAACCAAGATGGAATTACGCAGAATTGGACTGTTGCTTCTAGAGA
GGCTCTTACTGGACCCGCATGGGCGTATTTCTCTGCAGTATGCTGGATGT
ACGGGCGCCGATTATATGACCAATACAAGATTCCGATTGGTTTGATACAG
GGAGACTGGGGTGGTACCTCTGCTGAGGCGTGGTCTTCACCAGATGCTTT
GCTTAAATGTGGATTAACCAAGACAGATGATAGTGTTAACTTAAGAagac
caaaaacaaaaaaaagcgaTAAACAAAGCAAAGAGAATAAAGAAATGGAT
GGCTCTGAGGATTTTTTATTGAAGCAAGTTTTCAAAGGATCCCATCTCGG
GGAGAGTTTCCCTGATTCAACAATGATGAGATTCTGGAAACGATTTGATG
AGAAAATTCATGACTCTANTCGGGGAGAGTTTCCCTGATTCAACAATGAT
GAAATTCTGGAAAcgaattgatgaaaaaattcatGACTCTAAAACTAAAC
TTAAAATGAAGAAAGACATTAAATCTTTTGTGTCAAAGACTAAAGGAATG
GTGTCTAAATTTCTGAATCGAGTCAAAAACGCGcatcagaattttcaaaa
aagaaagggTCAATTAAAACATAGGATTCCAAAACAGATTAAATCTATGA
TGGTATCAAAGGACTCCTTAAATGCACCAGGTCCTGAAAACAACCATTCA
GCATTATGGAATGGAATGATGGCTCCTTTCACCAGGTCCACAATCAAAGG
GGTCGTTTGGTATCAAGgtgaagaaaataattttgttaatCCTCATTTAT
ACGCATGTGTATTCCCAGAGATGATCAATGATTGGAGAAAGAAATGGTTT
GAAGGAACTAATGGTTCCACGGATCAAATGTTCCCTTTTGGTTTTGTGCA
GcTTGCTTCAATCACTGACCAAAAGTCTTTAGACAGCAAATATTTCCCTC
GCATCCGTTACGAGCAGACAGCAAATTATGGCTACGTCCCAAACCCTAAA
CAACAAAACGTATTTATGGCTGTTGCTATGGATCTCCCTGACGACAACTC
ACCTTTTGGTTCCATCCACCCACGTGATAAAGCAACAGTCGCTGATAGGT
TGATTTTAGGCGCACGTGCTACAGTTTATGGAGAGCCTGATGTTAATTAT
AGAGGACCTGCTATTGACAGATGTCTAATAACACGATACCAGGAGCAATC
TGTATTGAGGGTTGATTATAAACACCTTGCTGGTGGAATTTATCTAAAGA
GCTACAACGGTTTTGAAATTTTGACAACTGGCTCAATCGCATGGATTCCA
ACTGAAATCATAACAGTCACAGAAGATAAACAAAGCGTGTTGGTAACTCT
ACCCAGTCCCCCAGACATTAAGATTCTTGGAGTGCGTTATGCTTGGGCTC
ATCATCCATGCGAGTATAAAAGTTGTGCTGTCTATTCAGTTAATAATGAC
TTACCAAGTCCACAAGATATTTGCTTCATTCCCTAATTCATAATATGTAC
CACTGCAAATTATGTAACtttcatgactttttgggttttttacgattctt
cttttataagaaccaataaaTGATTTGGTGAGGCTTGCCAGTTCTTATTT
TTTACCCTCTTTCGGTACTTTCTGCCCTAATTTTCCTAAAATTCTGTCTT
GTCACTCTCAgcattcttcttataaaaaaaatgtaatttacTTGGAGGGA
GGCAATCTTGTAAGAATCCTGCATTaactaaaaatatataaaaagaacga
cgaattttaaaaaaatatgagaatatttCAATCTAGCAAATGTTGAATTT
TAAGTTAGGGTTCCTTCGAAAAACCTTT
Run BLAST on NCBI

protein sequence of TCONS_00016199-protein

>TCONS_00016199-protein ID=TCONS_00016199-protein|Name=TCONS_00016199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MRKFMTLXGESFPDSTMMKFWKRIDEKIHDSKTKLKMKKDIKSFVSKTKG
MVSKFLNRVKNAHQNFQKRKGQLKHRIPKQIKSMMVSKDSLNAPGPENNH
SALWNGMMAPFTRSTIKGVVWYQGEENNFVNPHLYACVFPEMINDWRKKW
FEGTNGSTDQMFPFGFVQLASITDQKSLDSKYFPRIRYEQTANYGYVPNP
KQQNVFMAVAMDLPDDNSPFGSIHPRDKATVADRLILGARATVYGEPDVN
YRGPAIDRCLITRYQEQSVLRVDYKHLAGGIYLKSYNGFEILTTGSIAWI
PTEIITVTEDKQSVLVTLPSPPDIKILGVRYAWAHHPCEYKSCAVYSVNN
DLPSPQDICFIP
Run BLAST on NCBI

transcript from alignment at sc0000231:212819..217713+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016199 ID=TCONS_00016199|Name=TCONS_00016199|organism=Clytia hemisphaerica|type=transcript|length=4895bp|location=Sequence derived from alignment at sc0000231:212819..217713+ (Clytia hemisphaerica)
CTATGATCAGATGATAACATTTTGAATCTCATAgagaaaaatgttaaaag
ttgctatctttttaagttttttggttCAGTTTTGTAGTTCAAATCATTTG
AAAGATGGAAATAATACATTTCGATTTGCCAATACGTTTGGTTCGAATAT
GGTATTGCAAAGAGCTCCTTTGAATTCAAAGTTATGGGGATTTGGTGAGG
AAGGTCAAACTGTTCAATTAAAGCTCGGAGAAAATACACAGACTTTCCGA
ACTACAGTTAAAAAAGGTGAGAATTTTCAGCTAAGTAAAGATTAAGCCCG
ggaattttataaagttttgggATTAGGCTAATACATACACCCCTGGTTCA
CAACCCCGATGATTATTTTCCCAAATTTATCGGGATGAAGATTCTTTTGT
TCCTAAGTCGAAGAAAACACTTGGGATGGTGCAATTTTTCCCTTGAATGA
AATGGGGATGAAACCTAGTTCAATTTCCCAGTAGGGCTGAAATTTGCTGG
GGTCCCAGCCCCAGTGGATCTGTAACATAAGGAGGTATACATTAATGTCA
TATTCTTACGATTTTTAATCCTCAGAATTTTGTTNAGGAGGTATACATAA
ATGTCATATTCTTACGATTTTTAATCCTCAGAATTTTGTTAATCTTTAGA
TCAAAATGGGAATAGCACATGGAGCATCCAACTACCAGCAATGAAAGCGG
GTGGTCCATATACAATCACAGCTATTTCGTTTATCAAAGGGTTTACTGTG
ACCATATCGATTgaaaatgtcttatttggtgaTGTTTGGATGTGTGCAGG
ACAAAGCAATATGGAGCTGACAGTTCCCCAGGTAATAACTCGGGTAATAA
TACATATAATAAAATACCCATATCATACCAAGTCCAGTCATATATGGTGT
CAAAAAAGTTTCCCCAGTGGTTTCCATGATGGTTAGATTCGGCCATTTAT
TTTGCGTCATAGCATGATCTATAACTTCACAAGCTTTATAAGTGATAATA
TCTCGGATAATATTGTGGTGTGATAGTGTCATGGGAGAATTCTTCCGTCG
TGATGGCGTAGATAGAAGTTTCATGTGATGTGATCAGGGATTTAGGCTTG
GGGTGGGGCACTTCAAAACCTATGCTTTCACTTCCCTTTCGAGGTAGCAG
TACGGTCGTGCAATGTATTTACCTTGCAAAGAATTCCTATAATTGTACCA
TAGGCTGCTGGATCCTAAACAGACTTAACTATcagtggttttgtagaggt
ttgGGATTCACACTAGAAGCAACAAAGGCCTGTTCTGAGGCAAAACGATG
ATCTAGTATCTCAGgaataagttttcaattttcaattctttctATCTTAA
ATTGTTTTCAATCGTTTGTACTTTAGGCATTTACAGGTGAGCTAGAATTG
GCAGAATATGCAGATAACAGACCGAATATACGTATTTTCACCATCACACC
AAAATACTCTTTGAAAGTACCGTTGGTTGATTTTAACCAAGATGGAATTA
CGCAGAATTGGACTGTTGCTTCTAGAGGTATAAGGAAGATTTTATTTTAA
GTAACCTGTATGGTCTTACAGGTGTTATAAATCTGGCGGGGATTTTCATA
TATAGTGCCTTTCCTTAGttgggatttaatttttttttgattttttttaa
ttttttttttttttacatgaaacttGATATCTTTTATAATAAACGTACAA
TAAGGGCGATAAATTAGAGTAAATTATAGATTGGGATTTAAATTAGCGTA
GTTTTTCATTGGGATCGAATTTCCAGTGGGTCCATGAAGTACGGAGGCTC
AAAATTCTCTTAATTGTGAAATCTCGTGATATATCGGTAAAACCTAATCT
ATTACATTTATTTTCCATAACTATCCTAATTTTATTCGATATTACTCCAT
AGACTAATTGCgttgggaactaattttggtaaatttggcgAGTTTCATGT
CGAAATTAACCAAAATTAgtttcaccaaaatttgaaaaaattaatctgCT
TAAGTTAATATCGTCATCAAATTCATTCTTGTTCTGTTTGTAGAGGCTCT
TACTGGACCCGCATGGGCGTATTTCTCTGCAGTATGCTGGATGTACGGGC
GCCGATTATATGACCAATACAAGATTCCGATTGGTTTGATACAGGGAGAC
TGGGGTGGTACCTCTGCTGAGGCGTGGTCTTCACCAGATGCTTTGCTTAA
ATGTGGATTAACCAAGACAGATGATAGTGTTAACTTAAGAagaccaaaaa
caaaaaaaagcgaTAAACAAAGCAAAGAGAATAAAGAAATGGATGGCTCT
GAGGATTTTTTATTGAAGCAAGTTTTCAAAGGATCCCATCTCGGGGAGAG
TTTCCCTGATTCAACAATGATGAGATTCTGGAAACGATTTGATGAGAAAA
TTCATGACTCTANTCGGGGAGAGTTTCCCTGATTCAACAATGATGAAATT
CTGGAAAcgaattgatgaaaaaattcatGACTCTAAAACTAAACTTAAAA
TGAAGAAAGACATTAAATCTTTTGTGTCAAAGACTAAAGGAATGGTGTCT
AAATTTCTGAATCGAGTCAAAAACGCGcatcagaattttcaaaaaagaaa
gggTCAATTAAAACATAGGATTCCAAAACAGATTAAATCTATGATGGTAT
CAAAGGACTCCTTAAATGCACCAGGTCCTGAAAACAACCATTCAGCATTA
TGGAATGGAATGATGGCTCCTTTCACCAGGTCCACAATCAAAGGGGTCGT
TTGGTATCAAGgtgaagaaaataattttgttaatCCTCATTTATACGCAT
GTGTATTCCCAGAGATGATCAATGATTGGAGAAAGAAATGGTTTGAAGGA
ACTAATGGTTCCACGGATCAAATGTTCCCTTTTGGTTTTGTGCAGGTATG
ACTatgagaatttttattttcctgTCCTGGAGGGTAATTGTCTCAAAGAC
TTATTACAGGGTTGCGGTCAGGTGCCGATATCGATCGGTATGTCGATAAC
TAACGGAAAATATCGGAATAAGCTTACTGGATTTCTTAAACTATTGATAT
TTGAGAAGGAAAAacaactaccttatcggggaaaacttcgtcgggaaaTT
TTTCGTCGGGGGTAATTTTTGTTGgtggaaaaatattcgtcacttgctgg
tagttggtaaatgcattaaggccggggaaaattttcgtcggggaaaaata
ttcgtcacttggttAAAATTTCGCCACttttcccgataaggtattaaAAT
ATCGCAAGCTTACCCTACCCcacttaaaattttttaaaagcttATCAATT
CTCAATTCACTGATACACCTCTACGCCTCTTAATTTTCCACCGTACTATT
AGCTATTGCCTCAATACAACAGCTGCCTAAACAGCTCCCCAAAAAAAGGT
TCCCAGCTGGGAAAGCACAGTCTATAGATGGTGTCCGTCTGATATTGATA
TTActctcaaatttaatattttagcTTGCTTCAATCACTGACCAAAAGTC
TTTAGACAGCAAATATTTCCCTCGCATCCGTTACGAGCAGACAGCAAATT
ATGGCTACGTCCCAAACCCTAAACAACAAAACGTATTTATGGCTGTTGCT
ATGGATCTCCCTGACGACAACTCACCTTTTGGTTCCATCCACCCACGTGA
TAAAGCAACAGTCGCTGATAGGTTGATTTTAGGCGCACGTGCTACAGTTT
ATGGAGAGCCTGATGTTAATTATAGAGGACCTGCTATTGACAGATGTCTA
ATAACACGATACCAGGAGCAATCTGTATTGAGGGTTGATTATAAACACCT
TGCTGGTGGAATTTATCTAAAGAGCTACAACGGTTTTGAAGTAAGTATGC
AAACTTATGCTAGGGTAACTTTGTGTTAAAATCACACCCCCGTCTCTGAC
CAAATGAAAACGATTTCCTATTTCTATTGGGTAGGTATTTAAAATTCTAA
TGTCTACAGCTGAAAGGGCAAAAGTAAACTTTAAAAATGTCCACCTAAGT
CTACGACgattttggccaatttctccAATCGATAGGGTGTTCCACCGAGT
CTGCGCtactaccgagtttatgtatgtgtgtttttcagcgacggagacgg
tgaGGTtgtaatttgagtagatcctgaacaactgagaacgacggtaaatc
agcgctttaccgtcctcgattttgtgggTAGTGATTTAGCCCTCATGGGG
GGGGAGGTTCTCTGATGTAGAGAATGTTCAAAAAAACTTATGAGCAGCGG
GAGCTGCCGCTTATCTAGATAAACGATCGACAATTTAACAATTGCAACTC
TTGCTTATTTTAACTCTCTCTTATTTCCCCTTAGATTTTGACAACTGGCT
CAATCGCATGGATTCCAACTGAAATCATAACAGTCACAGAAGATAAACAA
AGCGTGTTGGTAACTCTACCCAGTCCCCCAGACATTAAGATTCTTGGAGT
GCGTTATGCTTGGGCTCATCATCCATGCGAGTATAAAAGTTGTGCTGTCT
ATTCAGTTAATAATGACTTACCAAGTCCACAAGATATTTGCTTCATTCCC
TAATTCATAATATGTACCACTGCAAATTATGTAACtttcatgactttttg
ggttttttacgattcttcttttataagaaccaataaaTGATTTGGTGAGG
CTTGCCAGTTCTTATTTTTTACCCTCTTTCGGTACTTTCTGCCCTAATTT
TCCTAAAATTCTGTCTTGTCACTCTCAgcattcttcttataaaaaaaatg
taatttacTTGGAGGGAGGCAATCTTGTAAGAATCCTGCATTaactaaaa
atatataaaaagaacgacgaattttaaaaaaatatgagaatatttCAATC
TAGCAAATGTTGAATTTTAAGTTAGGGTTCCTTCGAAAAACCTTT

Coding sequence (CDS) from alignment at sc0000231:212819..217713+

>TCONS_00016199 ID=TCONS_00016199|Name=TCONS_00016199|organism=Clytia hemisphaerica|type=CDS|length=3267bp|location=Sequence derived from alignment at sc0000231:212819..217713+ (Clytia hemisphaerica)
ATGAGAAAATTCATGACTCTANTCGGGGAGAGTTTCCCTGATTCAACAAT
GATGAAATTCTGGAAAcgaattgatgaaaaaattcatGACTCTAAAACTA
AACTTAAAATGAAGAAAGACATTAAATCTTTTGTGTCAAAGACTAAAGGA
ATGGTGTCTAAATTTCTGAATCGAGTCAAAAACGCGcatcagaattttca
aaaaagaaagggTCAATTAAAACATAGGATTCCAAAACAGATTAAATCTA
TGATGGTATCAAAGGACTCCTTAAATGCACCAGGTCCTGAAAACAACCAT
TCAGCATTATGGAATGGAATGATGGCTCCTTTCACCAGGTCCACAATCAA
AGGGGTCGTTTGGTATCAAGgtgaagaaaataattttgttaatCCTCATT
TATACGCATGTGTATTCCCAGAGATGATCAATGATTGGAGAAAGAAATGG
TTTGAAGGAACTAATGGTTCCACGGATCAAATGTTCCCTTTTGGTTTTGT
GCAGcTTGCTTCAATCACTGACCAAAAGTCTTTAGACAGCAAATATTTCC
CTCGCATCCGTTACGAGCAGACAGCAAATTATGGCTACGTCCCAAACCCT
AAACAACAAAACGTATTTATGGCTGTTGCTATGGATCTCCCTGACGACAA
CTCACCTTTTGGTTCCATCCACCCACGTGATAAAGCAACAGTCGCTGATA
GGTTGATTTTAGGCGCACGTGCTACAGTTTATGGAGAGCCTGATGTTAAT
TATAGAGGACCTGCTATTGACAGATGTCTAATAACACGATACCAGGAGCA
ATCTGTATTGAGGGTTGATTATAAACACCTTGCTGGTGGAATTTATCTAA
AGAGCTACAACGGTTTTGAAATTTTGACAACTGGCTCAATCGCATGGATT
CCAACTGAAATCATAACAGTCACAGAAGATAAACAAAGCGTGTTGGTAAC
TCTACCCAGTCCCCCAGACATTAAGATTCTTGGAGTGCGTTATGCTTGGG
CTCATCATCCATGCGAGTATAAAAGTTGTGCTGTCTATTCAGTTAATAAT
GACTTACCAAGTCCACAAGATATTTGCTTCATTCCCTAAATGAGAAAATT
CATGACTCTANTCGGGGAGAGTTTCCCTGATTCAACAATGATGAAATTCT
GGAAAcgaattgatgaaaaaattcatGACTCTAAAACTAAACTTAAAATG
AAGAAAGACATTAAATCTTTTGTGTCAAAGACTAAAGGAATGGTGTCTAA
ATTTCTGAATCGAGTCAAAAACGCGcatcagaattttcaaaaaagaaagg
gTCAATTAAAACATAGGATTCCAAAACAGATTAAATCTATGATGGTATCA
AAGGACTCCTTAAATGCACCAGGTCCTGAAAACAACCATTCAGCATTATG
GAATGGAATGATGGCTCCTTTCACCAGGTCCACAATCAAAGGGGTCGTTT
GGTATCAAGgtgaagaaaataattttgttaatCCTCATTTATACGCATGT
GTATTCCCAGAGATGATCAATGATTGGAGAAAGAAATGGTTTGAAGGAAC
TAATGGTTCCACGGATCAAATGTTCCCTTTTGGTTTTGTGCAGcTTGCTT
CAATCACTGACCAAAAGTCTTTAGACAGCAAATATTTCCCTCGCATCCGT
TACGAGCAGACAGCAAATTATGGCTACGTCCCAAACCCTAAACAACAAAA
CGTATTTATGGCTGTTGCTATGGATCTCCCTGACGACAACTCACCTTTTG
GTTCCATCCACCCACGTGATAAAGCAACAGTCGCTGATAGGTTGATTTTA
GGCGCACGTGCTACAGTTTATGGAGAGCCTGATGTTAATTATAGAGGACC
TGCTATTGACAGATGTCTAATAACACGATACCAGGAGCAATCTGTATTGA
GGGTTGATTATAAACACCTTGCTGGTGGAATTTATCTAAAGAGCTACAAC
GGTTTTGAAATTTTGACAACTGGCTCAATCGCATGGATTCCAACTGAAAT
CATAACAGTCACAGAAGATAAACAAAGCGTGTTGGTAACTCTACCCAGTC
CCCCAGACATTAAGATTCTTGGAGTGCGTTATGCTTGGGCTCATCATCCA
TGCGAGTATAAAAGTTGTGCTGTCTATTCAGTTAATAATGACTTACCAAG
TCCACAAGATATTTGCTTCATTCCCTAAATGAGAAAATTCATGACTCTAN
TCGGGGAGAGTTTCCCTGATTCAACAATGATGAAATTCTGGAAAcgaatt
gatgaaaaaattcatGACTCTAAAACTAAACTTAAAATGAAGAAAGACAT
TAAATCTTTTGTGTCAAAGACTAAAGGAATGGTGTCTAAATTTCTGAATC
GAGTCAAAAACGCGcatcagaattttcaaaaaagaaagggTCAATTAAAA
CATAGGATTCCAAAACAGATTAAATCTATGATGGTATCAAAGGACTCCTT
AAATGCACCAGGTCCTGAAAACAACCATTCAGCATTATGGAATGGAATGA
TGGCTCCTTTCACCAGGTCCACAATCAAAGGGGTCGTTTGGTATCAAGgt
gaagaaaataattttgttaatCCTCATTTATACGCATGTGTATTCCCAGA
GATGATCAATGATTGGAGAAAGAAATGGTTTGAAGGAACTAATGGTTCCA
CGGATCAAATGTTCCCTTTTGGTTTTGTGCAGcTTGCTTCAATCACTGAC
CAAAAGTCTTTAGACAGCAAATATTTCCCTCGCATCCGTTACGAGCAGAC
AGCAAATTATGGCTACGTCCCAAACCCTAAACAACAAAACGTATTTATGG
CTGTTGCTATGGATCTCCCTGACGACAACTCACCTTTTGGTTCCATCCAC
CCACGTGATAAAGCAACAGTCGCTGATAGGTTGATTTTAGGCGCACGTGC
TACAGTTTATGGAGAGCCTGATGTTAATTATAGAGGACCTGCTATTGACA
GATGTCTAATAACACGATACCAGGAGCAATCTGTATTGAGGGTTGATTAT
AAACACCTTGCTGGTGGAATTTATCTAAAGAGCTACAACGGTTTTGAAAT
TTTGACAACTGGCTCAATCGCATGGATTCCAACTGAAATCATAACAGTCA
CAGAAGATAAACAAAGCGTGTTGGTAACTCTACCCAGTCCCCCAGACATT
AAGATTCTTGGAGTGCGTTATGCTTGGGCTCATCATCCATGCGAGTATAA
AAGTTGTGCTGTCTATTCAGTTAATAATGACTTACCAAGTCCACAAGATA
TTTGCTTCATTCCCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009053XLOC_009053Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016199-proteinTCONS_00016199-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016199-exon-sc0000231-1491911889:212819..213084TCONS_00016199-exon-sc0000231-1491911889:212819..213084Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1510915933:212819..213084TCONS_00016199-exon-sc0000231-1510915933:212819..213084Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1575043694:212819..213084TCONS_00016199-exon-sc0000231-1575043694:212819..213084Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1491911889:213468..213649TCONS_00016199-exon-sc0000231-1491911889:213468..213649Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1510915933:213468..213649TCONS_00016199-exon-sc0000231-1510915933:213468..213649Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1575043694:213468..213649TCONS_00016199-exon-sc0000231-1575043694:213468..213649Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1491911889:214195..214345TCONS_00016199-exon-sc0000231-1491911889:214195..214345Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1510915933:214195..214345TCONS_00016199-exon-sc0000231-1510915933:214195..214345Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1575043694:214195..214345TCONS_00016199-exon-sc0000231-1575043694:214195..214345Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1491911889:214862..215713TCONS_00016199-exon-sc0000231-1491911889:214862..215713Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1510915933:214862..215713TCONS_00016199-exon-sc0000231-1510915933:214862..215713Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1575043694:214862..215713TCONS_00016199-exon-sc0000231-1575043694:214862..215713Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1491911889:216293..216658TCONS_00016199-exon-sc0000231-1491911889:216293..216658Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1510915933:216293..216658TCONS_00016199-exon-sc0000231-1510915933:216293..216658Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1575043694:216293..216658TCONS_00016199-exon-sc0000231-1575043694:216293..216658Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1491911889:217153..217713TCONS_00016199-exon-sc0000231-1491911889:217153..217713Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1510915933:217153..217713TCONS_00016199-exon-sc0000231-1510915933:217153..217713Clytia hemisphaericaexon
TCONS_00016199-exon-sc0000231-1575043694:217153..217713TCONS_00016199-exon-sc0000231-1575043694:217153..217713Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000231supercontigsc0000231:212819..217713 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.41632	5.1027	2.55575	1.94568	0.242638	0.104583	7.38123	6.71335	5.94937	6.57792	6.42398	2.99571	7.18543	7.8629	13.9253	16.5824	19.5074	23.2336	10.7065	11.4856	15.3663	15.9406	13.6138	16.6198	14.9975	13.2752	2.35497	3.03287	37.5152	33.2031
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013830SGNH_hydro
Blast
[Close]
BLAST of TCONS_00016199 vs. Swiss-Prot (Human)
Match: SIAE (Sialate O-acetylesterase OS=Homo sapiens GN=SIAE PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.960e-61
Identity = 126/281 (44.84%), Postives = 167/281 (59.43%), Query Frame = 3 
Query: 1176 IPKQIKSMMVSKDSLNAPGPENNHSALWNGMMAPFTRSTIKGVVWYQGEENNFVNPHLYACVFPEMINDWRKKWFEGTNGSTDQMFPFGFVQLASITDQKSLDSKYFPRIRYEQTANYGYVPNPKQQNVFMAVAMDLPDDNSPFGSIHPRDKATVADRLILGARATVYGEPDVNYRGPAIDRCLITRYQEQSVLRVDYKHLAGGIYLKSYNGFEILTTGS--IAWIPTEIITVTEDKQSVLVTLPSPPDIKILGVRYAWAHHPCEYKSCAVYSVNNDLPSP 2012
            +PKQ     +  DS+  P   + HS LWN M+ P    T+KGVVWYQGE N   N  LY C FP +I DWR+ +  G+ G T++ FPFG VQL+S   +KS D   FP+IR+ QTA++GYVPNPK  N FMAVAMDL D +SPFGSIHPRDK TVA RL LGARA  YGE ++ + GP  ++  I     + +L + Y      +  K    FEI         W+P  + TV+   QS+ + + S     ++ +RYAW   PCEYK C +Y  ++ LP+P
Sbjct:  237 VPKQGS---IPYDSVTGP---SKHSVLWNAMIHPLCNMTLKGVVWYQGESNINYNTDLYNCTFPALIEDWRETFHRGSQGQTERFFPFGLVQLSSDLSKKSSDDG-FPQIRWHQTADFGYVPNPKMPNTFMAVAMDLCDRDSPFGSIHPRDKQTVAYRLHLGARALAYGEKNLTFEGPLPEK--IELLAHKGLLNLTYYQQI-QVQKKDNKIFEISCCSDHRCKWLPASMNTVS--TQSLTLAIDSCHG-TVVALRYAWTTWPCEYKQCPLYHPSSALPAP 504

HSP 2 Score: 167.162 bits (422), Expect = 5.891e-44
Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 2 
Query:  119 FRFANTFGSNMVLQRAPLNSKLWGFGEEGQTVQLKLGENTQTFRTTVKKDQNGNSTWSIQLPAMKAGGPYTITAISFIKGFTVTISIENVLFGDVWMCAGQSNMELTVPQAFTGELELAEYADNRPNIRIFTITPKYSLKVPLVDFNQDGITQNWTVASREALTGPAWAYFSAVCWMYGRRLYDQYKIPIGLIQGDWGGTSAEAWSSPDALLKCGLTK 772
            FRFA+   ++MVLQ+ P  + +WGFG  G TV + L +  +T    V   +  + TW + L  MK GGP+ + A   ++    T+ + +VLFGDVW+C+GQSNM++TV Q F    EL+  A  + ++RI +++P  + +  L D     +   W+  + E L    + Y SAVCW++GR LYD  + PIGLI   WGGT  EAWSS  +L  CG+ K
Sbjct:   26 FRFASYINNDMVLQKEPAGAVIWGFGTPGATVTVTLRQGQETIMKKVTSVKAHSDTWMVVLDPMKPGGPFEVMAQQTLEKINFTLRVHDVLFGDVWLCSGQSNMQMTVLQIFNATRELSNTAAYQ-SVRILSVSPIQA-EQELEDLV--AVDLQWSKPTSENLGHGYFKYMSAVCWLFGRHLYDTLQYPIGLIASSWGGTPIEAWSSGRSLKACGVPK 239
The following BLAST results are available for this feature:
BLAST of TCONS_00016199 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SIAE1.960e-6144.84Sialate O-acetylesterase OS=Homo sapiens GN=SIAE P... [more]
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