TCONS_00016356 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00016356
Unique Name	TCONS_00016356
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	932

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000233:397221..410245+
coding sequence from alignment at sc0000233:397221..410245+

transcript sequence

>TCONS_00016356 ID=TCONS_00016356|Name=TCONS_00016356|organism=Clytia hemisphaerica|type=transcript|length=932bp
atacactttggtatctttatTCCGTCACagtgaaagGTATATCATACCAT
CTCGACCGACTCTTCAATGAAATCGTTGGAAGAAAAGCGAATCAAGTTGA
CAAGATGGAGAGTCTTAAGAGACATCATtgataaagaaaatttattaaGG
CTGGGAAACAGAAATATGAAGAGAGATTATTGGTTTTGGGCATTACTATT
GTGTTACATTAAGTCGCTAATATCCATTGAAGCTTCAAAATGTCAGAAGA
AAACACCGGAAAATCGACATGGTGTAAAACCTTTACTGATCATTGACgga
gAAATACAACCGTCAACAAACAACTACCTCACTACAATCCCAATCTTATC
AAGCGAATGGAAAATCACTTTGGACATAAAATACATTGGATCAAACCCTA
ACTGTTGCGGTACATCTACACTGTTTCTGAAGGATGATGATCAATACATC
CGACCAATCATCAATGGCTATGCAGGCACACACCAGATTCATGTATACCA
TAGAATTAATGGTGTAGACTCACCTATAGTGTATACAGTTCCTTTGAATC
AATACGTGCACGTGCAGCTCGAACAAATATACGTATCGAACGGCAACTAC
AGTTATACTGTAAAAGTCGATGATGTCAttgtgacgtcatcgattttAAG
CGATGCGAGACAATTGTACAATGTTAAAGTATATGCAGGACACCCACATC
TTAATGGCAGTCCAGCATTTATTAAACAAGttaaaatctttaatttcttG
TAATTAAGTCAAAGGAAAAGTaccacgtttttttataagaacatccaaaa
attttgaagccttcggttattcttaactttttgagttttaagcctaaaaa
tgttcttattatgTTCTTGTTTTCTCCATttcttgagtatttttgtccat
tttcctataaaattgggtgttttagagtctgc

Run BLAST on NCBI

protein sequence of TCONS_00016356-protein

>TCONS_00016356-protein ID=TCONS_00016356-protein|Name=TCONS_00016356-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MKSLEEKRIKLTRWRVLRDIIDKENLLRLGNRNMKRDYWFWALLLCYIKS
LISIEASKCQKKTPENRHGVKPLLIIDGEIQPSTNNYLTTIPILSSEWKI
TLDIKYIGSNPNCCGTSTLFLKDDDQYIRPIINGYAGTHQIHVYHRINGV
DSPIVYTVPLNQYVHVQLEQIYVSNGNYSYTVKVDDVIVTSSILSDARQL
YNVKVYAGHPHLNGSPAFIKQVKIFNFL

Run BLAST on NCBI

transcript from alignment at sc0000233:397221..410245+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00016356 ID=TCONS_00016356|Name=TCONS_00016356|organism=Clytia hemisphaerica|type=transcript|length=13025bp|location=Sequence derived from alignment at sc0000233:397221..410245+ (Clytia hemisphaerica)
atacactttggtatctttatTCCGTCACagtgaaaggtttgtttttattt
tagtttgtatctttgaaagaccccatcggcagggctgtcggatttaggac
cactcatggTACAGTCTTTAAACAGTTAAATGATGACAATTGAAAGCAGA
TGATTTGTTTCCAATGACCATCTCAATTCTCAAttgaacaaaaataacaa
tcgaaccagtcaaacttAATCCAAGCAAGCGACCGATTGAGATTCTagtt
taggcgtacaaactttcgcaagcagaaacttACCGTACGTGAGGTAGAAT
TTCAGGAAAAACAGTGAAATACCCAactcttttagaaaaaaaataaaaga
acaaaaccTATATACCaaaagttggtctaatattgacatccctcatctaa
ttccgacaccctttttatcagctgaaattgatagaaaggtcaaaactatt
tttctttgtttagtggtcagagagcaataatcctttttcaatcggtgatt
caaactttcatattatttcttatattttctgTCTCTAAAGTcgtaaagaa
gggtgtcggaattggacaagggatgtcgatattagaccagcTTTCGGTAT
TTAATGTTCCAGTAACAACAGGaaaggcgctgtggtatagtgatcattga
ccttggttactgcacaggcgactgaggttcgattcccactcgcatcggtt
cacttggcaagtgaatgaaccttcgcccgggtcaacccatgcgatgtgag
gggaattgggtagtcagtccaaggtgctgacggggcgctcattgaaagcg
tctatagttgcgaaaataggcctcaaagcctcctgcaactcaaccaaata
gaaaaaaaaaacaaatccaGCAATATTAATTACAgcacttttttcatatt
tactcttcttccatcatcaagaaaacaaaaccaaaagtttTAGATCTTTC
TCTAGCCCcctttttgatggtttgattgTATGTCTCTTTGATGATGTGAA
AGATATAAGATTATTTATTTTGTCTCGCTCAATAAAATAAAACAGTTTGC
AACGTCCTTCACAGTTTTGACTTTCTTGTGAACTAAAACTGAAAGTGAAA
ACTCCTAACTGTTAGGCTGTTGTTTAGGaccttcttttttaaatcttttc
agGCCATCCCACGTCTTAACATAAAGTAAAATTAATTATCACTtcttcaa
attatataaacgAGGAAAATGCCATTGTTGTGTGGTGCCTCTTTGCAGGA
CTTGTAGCCAAGCCAAGGACACAAGGAGAGGTTTGACGAGTGCACTGCCA
ACTGCTTTGGTCAATCACGATTTCAGTTCGTGATCAAATCGTGACGAGAA
AGAAAGATGGCAGATCTTGATCATTCGAAATTTCCGTTAAGGGAGACATG
CCCCTAGTGCGTGATTTTGCAATATCGCAAAAGTACTGTAACGTGTAGTA
AGTGTAAGCATGGACGAGGAGGAGAGCGAGGCTGTGCAAGTGCGAGCCCA
GGGGGAGAGTACTTAGGCAAAGTGGGTGCCGGGGGCGatgcctacgtcat
gtgccgcgcttaagaatagtttttttttagcatcccaaaatgcactgtaa
gggtgttcTGTGGTATTGCACTGTAAGGATCGAATTTTACAATATTGTTA
ACCAGTTTTCAGCCAATATTAAATGATAACACTTGCTTGAGTTGACTGCA
GATAAGTAGTACCGttgtttcgaaatcgagtgcccccccccctgaaagcA
GCCATCGAGGGatttcttcaaaatatctgcTCTAAAGGCATGTTCCAGCT
GAAACTAGCGATCTGTTCTAAGAAAAACGGAAAAGTTGTCTACCTGGAAA
TTATTGATCTGTGCCGTGAAAATCATATATCGAcacgacgctgtgccgac
gaatcgagattctattcagagcgcaatcaacgaagataAAAGTagccatg
acgaccatccaaaatcttggatgaagttcaaagttgatatttttattccc
atcgttgaaaacacaactaaaaaagtctTCCATGCTTCTTAAAAAGactc
agtgatagagaatcgtaacataaagtctgtctattacttcgattcaatta
aaagtggcatttccataattaatagctTAGTAAtaactgttatacatttg
gggatcatgtaaaagatttctttcaaaagaaacttACTTCAATTAcaggg
gctcccccaggggctggcgtgacgcgtgaatgacccttttttctgtcgtg
aatacgtgaattggactttttcaacgcgtgaatacgtgaattgagatatc
cgcgtgaacgtgaaaataagataTTTCCATGTGTATTTTAACAACGAACA
TGTATAATTTGACAGTTAAAAGggacaaaatcgtgaaaatattgtcaccc
aatagtgccatctgcgaaattaagtccccacgAAATCTTATCATTTTGGG
GATGAGCTTAAGGTATGTTTCACCTTTTTTGACACAtgctctttaattga
tcatatctttagaacaacaaatttttatatatcaaaagtctatatttttt
gaaagccaataatattatctttctaatggtaaaagtttcagctgaattta
aaaaaactgggcaggatataattaaaatcttaagaattttaaccttacct
acttcaaagaagttaaagtcacccatagcttttgaatttctatactatgt
tcccaatagattgaactaaaaaagtgtcttgggatttttttttgggattg
actctaactctttaaatcctaaattctgtaaaaatatcgataaaaaagta
aatttaaatgtgattttttcagcNNttaacgagatgattgctgtttattt
gagtaatcagtgaaatgtgtcaaaaatattactattcaatagaggtgaga
ataaacatcagctgaattctctcttttgtcttagttgtttccgaaagaga
caattatttgagtaaataatccatcataagacgaacttcgTTTTGATATT
TAAATGGTTATAACTCTGGATcaaaaaaagattttaagatcgcgatttta
ccaaaatgaaatccagtaacttttcttccactttgactgaaaaaaaattt
tttgacaaaaaattggaaaaaaggtgtacataCCATAACCACGGAATTCA
ATCCCCGCAAAAATCANNactttcacgactttttaattaagacgaaaagg
attgtgggattgattttcggtcaagtgttaaaagtaataattatgacgtt
tgcataacggTGTGCTATTAATTTTAACGTATGCTAGACGACTACGATTA
TACAACAAAACTTCTGTATTACACATTAACTCTTaaaaagggacataaaa
gtagtaaaatgtaaacactgcgcgaaccacgtgtcactaaagagaacaat
taaaatcacgtgtccaaaacaaagttgtaaaacaattgaacaatcaaaat
tagccatatttggtttgattttttattttgacatgtgacatttgttttga
ttttgaatccgctgcatacagttcgTTTACAAATTTTGCAAGTACTGTTA
TTTCCCTTTAAGTGACAcggttatttttttctattttttttaaagaaaat
tcgatgacgtcataaaaactaaaaattgaatttctcaagaatggtttatc
caattgtcttcaaactttaacCAAAAATGTATGtcactaaagtcgatcat
ttgaaaaaataattttttcaaaattttaattacgtcagcaaaaaatagca
tttttcgTTCTTTACGAATTTccgctgacgtcatcaaaatttcgaaaaaa
ttagtttttaaaatgatcgactttagtgagatacatctttgatgaaagtt
tgaagacgatTGGATTAACcattcttgagatattcaatgtttagttttta
tgacgtcatcgattatgacgtcattatcagtttttgcggtttttcgcgaa
aatcagggaaaaaacaattaggttacacatcaggttagaaactacatcat
agtacctttcattttcagtcatttgtttggtcattttctgtcgactaatg
cgatctaaaaattatggtaattttcagtttttgagacatgccataactta
cccgagttaTTCTTCACTGGAGACTAGAAAAATCGTTCCTGTTAATaaga
cattcgagttgtagaggttcgaaCTACGGAGATTCCATTGTATCTCATCC
GGATAAAAGAAAGATACCACGAATCTATATTTTCTTAGGTATATCATACC
ATCTCGACCGACTCTTCAATGAAATCGTTGGAAGAAAAGCGAATCAAGTT
GACAAGATGGAGAGTCTTAAGAGACATCATtgataaagaaaatttattaa
GGTAAGTCATATTTTCATTCGGTGAGTTTAAATTTATTACGGTTAGTCCA
AGCTTTACCTTGACAAATTCATACTTTCAGaccgaatttaataaaattgt
taatttaccGATTGAGAATCTTAAAGTATCATGTGAAATTCACATTTTAA
ATACCGGATGATTACCGTTCTGCAAAATAATCTTTGTTAGTGTTGTCAAA
AATGTTATTGACgaatttttcttctgaaaatccATACACGTtatcttcat
aaaaaaaaactatataagaacataaggcttcgatggccaaaaagttaaga
acattataaggcttTACAAACTCTAAAATGGCCAATTTCCCAAtttcttt
aaccctattcaacctaggcttttaggggcggttcagaactaggggggggg
gcttttcctgtaccaccccttaacttttgatctagtgggtctttttggat
gaaatttggcacacaagatccttgtgacgtaaggtaacttttgacaaaaa
agttttttgatgacgtcactcatcatgcccaaagtgagcaaaaaccgaaa
atttcctttgttcttataaatagctattgtattctaagaaaggctttaga
aaaaagttgcttgagtttaaaatgcttattttaacctaaatattcaataa
attacggtttaaacgatatatttgacaatgaaaataaatttgtattggaa
aagtgtcaatttttgtgacaccttactgtcagaagtgtcatcatgctcaa
ggtgtgaaaatatctatgtgtcaaatttttttttattttgaagctaaata
aaagttaggaatttacagaaaatttcacggcaaaatctctattatttcag
gagctattagcaatttagtccgaatagggttaaaaaatGGACAAAGATGC
TCACAAAATAATGTAGGCCATCAAAAAGTGGTAGTCGAagaaaataaatt
agaatataCCTTCAATTTCCTCCAGTACAAACTGTGGGATAGGGTGTGGG
AACGCAGGGACGACTGGTAACTCCTAACGGGATCTTCTTTGCCTGTTCAT
AAAAAAGAATCAAGTAATTTCGGTTTCTTACActccatttttctaaaaac
taATATTTCATAAGAGTCAAAGGCTCAAATAAGAACACATTCAGTCCATA
TTATGGTCTCAAAGTGCTAAAAAAAGAGCAGCCAAACCTCAAGAAAAACT
CTGTCACTGAATCAAATTTCTAAGTAGATAATGACCACTCCGCGAATGGC
ACGTATTCACTAAAGGCAATATGTCCGTTGGAAGATTTTCCACAATTAAA
AGCCcactttgaagattttcatcAAGATCTTGGAAGAACATTGAAGGGCT
TTTGAGCGCGCTGATTGGCTGAAGTAAAACAATCACGTCAAAGCATTACG
TCAATCTTAACCCATCAACCTGCCCAAACCCAGCCACTTTCACATTCGTA
ACGTGGTTTTTATTGTTTGATTGTTGCAGGAGGCTCTGGAGCCAATTCTC
GTAACTATAGCTGCTTCGAGTAAGCATCTCGTCaccctggtaaaaattct
tgaaaagttcttgaaacctggtaaaaattcttgaaaagttcttgaaaaga
tcttatcaagaaactttacttattctttttcagtttcttactacGAACGT
GCCAAGATCTTACAAGATCTTTAACGATCTGATAAGACatttttataagt
tttgaaTAAGATTCTTGTCCCTTAAAGTGATTCAAGATCTTGACAGAATC
TTAAGTAAAAGTAAGTCTACGACCGTAgttctacccaaaggtagggtaGG
GCttcactctttctccctggattgctccacttacccttgatccttctctt
aattgctgagcatcaagcagagaggtatcaagtaccattttggatatttt
tgatatgacccgactgggggttgaacccacaatcATTCGCACCGTAggcg
gatgctctaccactacaCTGCAGTCGCTGACGAAATCTTACTACTATTCC
CCTTCACTTATTGAATAAGGGCCGAAAGCTTCGATCGAGTGACAGCATTT
AACTGATGACCTCGTGAATACTTCCCATTAATCAACTATTTCATTAATAC
AGTCAATGATAACAAACACACAAAAGAAAAACCACTCACCGTATTTCGAA
GCTAACCAAAAACTGATTCTTAAATACTATCCTAAGAGATTGCTCTCCTT
GAGTCTTAAAGACtccttcttatgaaaaacaatcataacaagaaatttac
ttgtttttaatattcttAACCCGAACTTGGTAAGAACCACTAAGAATCTT
AAAGTTTCTTTGCACATAATAGTTAgttaagatttggaaagtctctttat
aaaaTCTTTATAAGTTACGCAAAGAATCCTAAAATATTTTATGGCTCAAG
ATTTCGTAAGATTCTGCTTAAGAACTTAAtaagaaataataattttctta
ctATAAATATGCGGGAAGAATCTTGACAATTCCTAacaatttctttataa
gatctttaaagatctttttgttggaagaaattttcaagattgccTTAGAA
Tcgttgtaagatcttacaaagattttttaagattcttacttgttaaagat
cttgaaagatcttcaacgatcttttcagatcttatcaagaatttttacca
gggcAGCACTTTGAACTGACTACcaaattcccctcacatggcatgggttg
acccgggtgaaggttcattcacttgccaagtgaaccgttgttagtgggaa
tcgaaccttggtcgcctgtacaggaatcaagcTTGATGTCCATTGTTGAC
TaaacaaccaggtcagatcgtCTCCCTTTAGAGCAGAGTGTTGTGCGCGC
TGAATGGATGATCTGCTATCAGATTAAATTTGAGCAATCTCTAGTACacg
cccttctcacagacccgttgTTACcccctcccactggaaaaattagtcaa
aaaatcGTCCCAGTTGAAAATCATActcaatttttatccccgctgaaaat
aataaaaaaaaaccaaaTCCTCACTGTAAAAAAATTGTACTTTCTCTTTA
TTCCAATGGATCTTCTGATTTGGAAagcaatggaattcaaatcccaagCC
ATAATAAACATGGAAATATCTAGGCTGCTTGCACCCACTAACgaattcgt
gctccttatactactaattgcggttttgtagaggtctgcgattcagacta
gggaATATCGACCCCGTTCgaatttcagtccgttatttttacccccactg
gctgaaaaatcctaaGGGAGTGTtctaaattgtgaaaataaggtGCATTT
CcggatatatattttttcaattggtaGATGATGATATATGAATAAAACCC
AAAGAATTGGGAATGTTTGAATTTTCCGCTATGCATACATTTTTTACATT
ATACAGCTATTTTGATACATTTCCACTTTTTTACCCTTTTGTACTCTTTC
CATATCACACAGGCAAGTTTTATATTTTGTCGTAATTCCGATTGAGGATC
TAATTTGATTTAAAGTTAGTACTTTTAAACTTACCagcgaaaattttcaa
catttttatgaAATCCAAAATTGGTAtaaccaaagatttattatacactg
gatatacaagtaacagatttttgccgatttctcgtgtactagctatgtcc
gcagtaatgatattattgttcaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNtaattataagtcgttatgacgtttcaagctgt
gagagagatgcaaaagacgtgttgtgtataagaaatttaatgttgacacc
ggaaatttttaaacttcaacctcaaaaaaaccacttTGCCACCACGTgac
tccaaaggattttcataccacagtggatcCAAGACattcaagtcttatgt
atgttaatttagtctcttctggggacagtcttggaaagatatttgcaatt
gaaaatttcgtgtcactataagcattttgcgtgaatttcttgtctaatga
tgtttttctcacattacatttcacaaatgtatccagctcggAATGCTAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNgacaaagctagaacatcaattgttttctgaaacaatgaaaat
acaatgatcgctctccatcgttttatgagtcgtttatccagtgtataata
aatccttggtatAACAGCTTGCTAGTTGGAAAATGGTTTGAGTAACATTA
GAAAAGTATTTTTATGGtctttaggaaattttgaacgTTTATACACGTCA
CTAGTATTTGAAGATTTATTTCCGTGtttatttaagaaaaatttaaaaaa
atcaccggTAACCATTTCAatattgaaaattcaaattttaataaaaaatg
tcACATTATGGCAAAAACAAATCCGCTATGATTGTTCCAAAGCATAGTTG
ACATTCATTTGGAGAATTTCTCCCCTGCAGACTTATCGATTTATCAAATT
AATAATGAATTTCCTAAATAAATTCTAATTTTGGgagatttttaataaaa
aatgtcACATTATAGCGAAAATAAATCCAATATAATTGTTCTGGACCATA
GTTGACATTCATTCGAAGATTTTCTCCCCTGTACACTTACTGGTTTATCA
AATTAATAATGAATTTCCTAAATAATTTATACACGTCACGTCACGTCGTG
TTTGAAGAgaaagattaaaataatttttttattttcgtgtttaagaaaca
ttttaaaaaaatcaccgaaaaggcgaaaataaaaataagtagtgtttctg
gaaaccagccgggtgaaaaaaataattttctgacccggccgcagactatg
ggttcatctatacgAGTATTTAGGGCTCACTTTTATACtttgtttgtaca
taaaagttatctttataaagtttctacttcaatgattttaattatcaaaa
atagcaacaaaataaatttccggccggccgcatgagagcttttttctttc
acccgtattccggaaacactacatttttttattttcatctaatcatttca
atattgaaaattcaaattttaataaaaaatgtcACATTATGGCGAAAACA
AATCCAATATAATTGTTCTGATTTGTCAAATCAATaatataaattcaaat
tttgggagattataaattataaatacacattgaaaaaaaagtaaaaatta
gaaacgaatttcaagatttttgcaTTCACACAACAATAATGTCTAAAATT
CGGTTTAAAAATACTCCAGTGAAGTGAATTTGTTTTGTAcctattttttg
cttaaatttgtataaaaaagggTATAAAATGAAATAGACCTGGAAAGTTT
ATATTATTGAATgcaccttttcgaccatagtCGCCAATTGCTGCATGGGc
atttttttgttcgttttaccaccctaaaaccatcccagtctttttttcgc
gcctaaagacaatagagaaaagtgtaaaaaaaggattggatcgaatttag
ggtggtaaattaaataataaaatggtcaaaaagatgtattttacATTACA
AGTTGGTcaactatttgaaatttttagcatTCCTTTTTAGGCTGGGAAAC
AGAAATATGAAGAGAGATTATTGGTTTTGGGCATTACTATTGTGTTACAT
TAAGTCGCTAATATCCATTGAAGCTTCAAAATGTCAGGTGAGTGgaagtt
tttgttccttttaAATCGTATACAATGGAGACAATGGGCTATTCCTGCGC
ACTCCTTAAGTTAGGAAGGTCTTTTATGGAAAGGTAAACCccctggattt
tcaaaaaaaataattttagaactcccttggattttttctcactttttttg
agCCGGATTTCCGATTTCGTTTTACTGGCACCCTGGATTTCCAACCTCAT
TCTcgtgaccaccctggatttttacactcaaAAAACAGTTCCGCTGGATT
Ttaattttccagaccaccctggacgtcacacctcctcaacatagggggta
gacgatcctatcgtctacacaagatcactaaaaaaaggaatagtttagga
gaggcgtgatcaattcgggtggagtaagctgggcggagatgtttacagtt
cCAAAATTCTACCGCcacccgtaaaccgccctgacgccctaactctttcc
cgcgtttactgacctttaaacggacgatagcatcagCCCACTTAAAGAAG
ACATCGTAAAAGAAAGCAAAATACATACAACATTTTCTCTCCACTACCAA
GGTCTCTGGAgacatggatttattatagagactctggataaacatcaaat
gaaacggtggagagcgaagtattgtatttccattgtttcagaaaacaatc
gatgtacaatcgatgtacaggctttgtccgcaaaggacgactgtcatggc
ggctcgaaggactctgattttggaaaatgattaatactcttatttctaaa
aagttctctaactttttctattcgtaggccaaaagtttaaaaataaatgc
tagaataccaaacgaatacatttatgaaattagGTGTGAGAACAAAATCA
TCAGaggagtaaaatcaaacaaaatgcttataatgacacgaaattttgaa
tcgggaatatctttccaatatttctccgagaagaACTGAGATTGACATAT
GTTAGACGTGAGTCTAATaactccactgtggtatgaaaatcttttggtgg
cacgatGGTTTTTTTAAGGTTGAAGTTATatggtgtcaatattcaatttc
ttatacatgtATGTTTTTTGCATTATTCTCGCaatataaaacgtcataac
gacatatcattagcaattaactagctgagtttgaatctcggaggaaagct
taaagtctcttttgggaaatGGATGAGTGCTCTTTGATGAGGAACCTGca
aaaaaatactacaaaaaatcatttaatggtggaATATGTGGTGAACAATA
ATGTAATTACTGCGGACAATTCTTGTACAttagaaattggaaaaaatcag
CTAGTTGTTTTttagtgtctataataattccttgaTAAATCTAGTACCCC
GATGTATGTTCATTTTGTTTGATAGAAGTTCTTTATTGTTCTTCCTTTTG
TAGAAGAAAACACCGGAAAATCGACATGGTGTAAAACCTTTACTGATCAT
TGACggaggtaaaaaaaattactttctttCGGAATTAGATTGCGATTTTG
TGATTGTTCGTTATCTAGACTAGTAAATCTATTCGTTGTATTTTGACTGC
AGCTTACCCTTGCATTTGGCTCACTACATGTGCTGGATATACGCTTTTCA
AACCATTATTCAAAGGGAATTCATCTTTTTTATCAGAACTCTTAATAAAC
ACTATTACTGTGTTCTTGTATCTCTGGAAAGCCAGTCGCTTGCAAGTCTA
GGTAATATCATGTGAAAAAATAAAGTGACCCATTAACAGGTCCCAGATTC
TTTTCAAAACCCGTATATGTTTTTTTCtgtaagcataacgtttataagca
caaGCAGGCttagtttttggtacctaaacaaggCCCAATGGCTAAGCACA
ATGCGAGcctgataaaaaaaaaacatttataatTTTTCCTTCAGAAATAC
AACCGTCAACAAACAACTACCTCACTACAATCCCAATCTTATCAAGCGAA
TGGAAAATCACTTTGGACATAAAATACATTGGATCAAACCCTAACTGTTG
CGGTACATCTACACTGTTTCTGAAGGATGATGATCAATACATCCGACCAA
TCATCAATGGCTATGCAGGCACACACCAGATTCATGTATACCATAGAATT
AATGGTGTAGACTCACCTATAGTGTATACAGTTCCTTTGAATCAATACGT
GCACGTGCAGCTCGAACAAATATACGTATCGAACGGCAACTACAGTTATA
CTGTAAAAGTCGATGATGTCAttgtgacgtcatcgattttAAGCGATGCG
AGACAATTGTACAATGTTAAAGTATATGCAGGACACCCACATCTTAATGG
CAGTCCAGCATTTATTAAACAAGttaaaatctttaatttcttGTAATTAA
GTCAAAGGAAAAGTaccacgtttttttataagaacatccaaaaattttga
agccttcggttattcttaactttttgagttttaagcctaaaaatgttctt
attatgTTCTTGTTTTCTCCATttcttgagtatttttgtccattttccta
taaaattgggtgttttagagtctgc

Coding sequence (CDS) from alignment at sc0000233:397221..410245+

>TCONS_00016356 ID=TCONS_00016356|Name=TCONS_00016356|organism=Clytia hemisphaerica|type=CDS|length=2748bp|location=Sequence derived from alignment at sc0000233:397221..410245+ (Clytia hemisphaerica)
ATGAAATCGTTGGAAGAAAAGCGAATCAAGTTGACAAGATGGAGAGTCTT
AAGAGACATCATtgataaagaaaatttattaaGGCTGGGAAACAGAAATA
TGAAGAGAGATTATTGGTTTTGGGCATTACTATTGTGTTACATTAAGTCG
CTAATATCCATTGAAGCTTCAAAATGTCAGAAGAAAACACCGGAAAATCG
ACATGGTGTAAAACCTTTACTGATCATTGACggagAAATACAACCGTCAA
CAAACAACTACCTCACTACAATCCCAATCTTATCAAGCGAATGGAAAATC
ACTTTGGACATAAAATACATTGGATCAAACCCTAACTGTTGCGGTACATC
TACACTGTTTCTGAAGGATGATGATCAATACATCCGACCAATCATCAATG
GCTATGCAGGCACACACCAGATTCATGTATACCATAGAATTAATGGTGTA
GACTCACCTATAGTGTATACAGTTCCTTTGAATCAATACGTGCACGTGCA
GCTCGAACAAATATACGTATCGAACGGCAACTACAGTTATACTGTAAAAG
TCGATGATGTCAttgtgacgtcatcgattttAAGCGATGCGAGACAATTG
TACAATGTTAAAGTATATGCAGGACACCCACATCTTAATGGCAGTCCAGC
ATTTATTAAACAAGttaaaatctttaatttcttGTAAATGAAATCGTTGG
AAGAAAAGCGAATCAAGTTGACAAGATGGAGAGTCTTAAGAGACATCATt
gataaagaaaatttattaaGGCTGGGAAACAGAAATATGAAGAGAGATTA
TTGGTTTTGGGCATTACTATTGTGTTACATTAAGTCGCTAATATCCATTG
AAGCTTCAAAATGTCAGAAGAAAACACCGGAAAATCGACATGGTGTAAAA
CCTTTACTGATCATTGACggagAAATACAACCGTCAACAAACAACTACCT
CACTACAATCCCAATCTTATCAAGCGAATGGAAAATCACTTTGGACATAA
AATACATTGGATCAAACCCTAACTGTTGCGGTACATCTACACTGTTTCTG
AAGGATGATGATCAATACATCCGACCAATCATCAATGGCTATGCAGGCAC
ACACCAGATTCATGTATACCATAGAATTAATGGTGTAGACTCACCTATAG
TGTATACAGTTCCTTTGAATCAATACGTGCACGTGCAGCTCGAACAAATA
TACGTATCGAACGGCAACTACAGTTATACTGTAAAAGTCGATGATGTCAt
tgtgacgtcatcgattttAAGCGATGCGAGACAATTGTACAATGTTAAAG
TATATGCAGGACACCCACATCTTAATGGCAGTCCAGCATTTATTAAACAA
GttaaaatctttaatttcttGTAAATGAAATCGTTGGAAGAAAAGCGAAT
CAAGTTGACAAGATGGAGAGTCTTAAGAGACATCATtgataaagaaaatt
tattaaGGCTGGGAAACAGAAATATGAAGAGAGATTATTGGTTTTGGGCA
TTACTATTGTGTTACATTAAGTCGCTAATATCCATTGAAGCTTCAAAATG
TCAGAAGAAAACACCGGAAAATCGACATGGTGTAAAACCTTTACTGATCA
TTGACggagAAATACAACCGTCAACAAACAACTACCTCACTACAATCCCA
ATCTTATCAAGCGAATGGAAAATCACTTTGGACATAAAATACATTGGATC
AAACCCTAACTGTTGCGGTACATCTACACTGTTTCTGAAGGATGATGATC
AATACATCCGACCAATCATCAATGGCTATGCAGGCACACACCAGATTCAT
GTATACCATAGAATTAATGGTGTAGACTCACCTATAGTGTATACAGTTCC
TTTGAATCAATACGTGCACGTGCAGCTCGAACAAATATACGTATCGAACG
GCAACTACAGTTATACTGTAAAAGTCGATGATGTCAttgtgacgtcatcg
attttAAGCGATGCGAGACAATTGTACAATGTTAAAGTATATGCAGGACA
CCCACATCTTAATGGCAGTCCAGCATTTATTAAACAAGttaaaatcttta
atttcttGTAAATGAAATCGTTGGAAGAAAAGCGAATCAAGTTGACAAGA
TGGAGAGTCTTAAGAGACATCATtgataaagaaaatttattaaGGCTGGG
AAACAGAAATATGAAGAGAGATTATTGGTTTTGGGCATTACTATTGTGTT
ACATTAAGTCGCTAATATCCATTGAAGCTTCAAAATGTCAGAAGAAAACA
CCGGAAAATCGACATGGTGTAAAACCTTTACTGATCATTGACggagAAAT
ACAACCGTCAACAAACAACTACCTCACTACAATCCCAATCTTATCAAGCG
AATGGAAAATCACTTTGGACATAAAATACATTGGATCAAACCCTAACTGT
TGCGGTACATCTACACTGTTTCTGAAGGATGATGATCAATACATCCGACC
AATCATCAATGGCTATGCAGGCACACACCAGATTCATGTATACCATAGAA
TTAATGGTGTAGACTCACCTATAGTGTATACAGTTCCTTTGAATCAATAC
GTGCACGTGCAGCTCGAACAAATATACGTATCGAACGGCAACTACAGTTA
TACTGTAAAAGTCGATGATGTCAttgtgacgtcatcgattttAAGCGATG
CGAGACAATTGTACAATGTTAAAGTATATGCAGGACACCCACATCTTAAT
GGCAGTCCAGCATTTATTAAACAAGttaaaatctttaatttcttGTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_009135	XLOC_009135	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00016356-protein	TCONS_00016356-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000233	supercontig	sc0000233:397221..410245 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.246209	0.574214	0.0923794	0.359142	0.132528	0.106331	0.127824	0.236291	0.165567	0.0512634	0.0497885	0.297264	11.9805	12.0092	3.71237	2.20987	2.3802	3.79902	14.6621	17.0282	9.88039	9.10644	3.27229	7.44015	8.16609	9.45633	0	0	0.0547386	0.22253

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00016356 vs. Swiss-Prot (Human)

BLAST of TCONS_00016356 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00016356 (transcript) - C. hemisphaerica