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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016452 ID=TCONS_00016452|Name=TCONS_00016452|organism=Clytia hemisphaerica|type=transcript|length=1594bp
CTAGAATGTTCATCAGGGTGTGAGAGGTTGAGTGACCTTTTCGAAAGCCA
AATTGTCGTGCATAAATTTGGTtaaattggttgaaaaattcaataACTCG
AGAATACATAATTTTCTCatatattttttcgatattGGACAAGAGAGAAA
TAGGGCGATAATTTGATACTTCTAGTGGAGATCCTTTATTTTTGAAGACT
GGAATTACTTTAGAAATTTTTAGTACATTGGGAAAAATTCCAGTTGTGTA
GGATTGATTTATTAAAACAGAGAGAGGTTTAGAGATTTTATCTTGAAGTA
ATTTTAGGATTTTTATTGGAATACTGTTTGGTCCAGATGACTTAGAGGAA
GAAAAGGACCCAATTATCTTAGCAACCTCATCAGAAGATGTAGGCCTAAG
AAATATGGAGTTTTGGTTTCTGTGTTTAAGGaaattggaaaagttttgaa
aagatgGAGGAATTTTTTCTCTGATATTATCAGCAATGGACGTAAAGAAA
TTGTTGAAGTGATTAGCAACTTTGTCAGGGCTAGAGTGGACCTGACCATC
AATTGAAATagagattttagaatttttttggtccttcgTTGAAATGACAC
TACTGGAACGAAAAGCATTCGTCGTGGACACACGAACGGTCAGTCATTCG
TCACGAACGGTCTATCCGTTCGCCACGAATGCTTTTCGAGCGAGTTTCTt
ttaaagcgttcgtcacaAACGCTTTCTAGATTTCGACTCATtcgtgacga
acgctttaaCAGGGAGGCGTTTGTCACGAATGCTTTATGATTTATAACGN
NNNNNNNNNNNNNNNNNTTCACGACGAACGCTTTGCTTTTAAGCGAAAGT
CTAAGCGTTCATGACGAATGCTTGTGCATTTTTCACGAACGCTTTTCAAA
TAGGGTCAAATCCAAACCGTTCGTGACGAATGGTTTGGTTCAAGGGGTTC
GTGGCGAATGGCAAAAAGAGGTAGACTATGTTTTAAGTGTTCGTCACAGT
TGCTTTGTTGTTTATTACAAATTATATAATAAGGAGCTCCAGCACAAAGT
CAATTGCCTGGAAGCgaaataaatatttcataatttgttTTATCACACGA
GCCTTTCACTAGTTAGATCTCGATAAAGCGAACAgggaatataattttgt
ttgaataAAACATCCCTTTATCACagaaacaaagaaacaaaaatttactt
gaATTTCAAACTACCatcatccactaaatatttgagacaaaggagagttc
ccggtgtaattttgaacaccacaattgatttttaagcgcctcaaacgaca
gttggaaagtagagttttaactctgagttttaacacgagATTTAggtctt
aggaccttaggatctcaggatttaaaagctcaaatttgctcaaatgaggc
ttggaatatagcctagaagccaccaaacccctctaaaatcaaaatattca
atggaagaaagtcgaagtgctaaaatagcaattcttgcccgaactttaaa
ttctgaaaaacgttaaaatacactaaaatctcaatatatttcgagggtGA
TTGTAGcgacaatagaatttcaaaccTCACTTGTCTAAAGCAGG Run BLAST on NCBI transcript from alignment at sc0000237:313044..314637 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016452 ID=TCONS_00016452|Name=TCONS_00016452|organism=Clytia hemisphaerica|type=transcript|length=1594bp|location=Sequence derived from alignment at sc0000237:313044..314637 (Clytia hemisphaerica)
CCTGCTTTAGACAAGTGAggtttgaaattctattgtcgCTACAATCaccc
tcgaaatatattgagattttagtgtattttaacgtttttcagaatttaaa
gttcgggcaagaattgctattttagcacttcgactttcttccattgaata
ttttgattttagaggggtttggtggcttctaggctatattccaagcctca
tttgagcaaatttgagcttttaaatcctgagatcctaaggtcctaagacc
TAAATctcgtgttaaaactcagagttaaaactctactttccaactgtcgt
ttgaggcgcttaaaaatcaattgtggtgttcaaaattacaccgggaactc
tcctttgtctcaaatatttagtggatgatGGTAGTTTGAAATtcaagtaa
atttttgtttctttgtttctGTGATAAAGGGATGTTTtattcaaacaaaa
ttatattcccTGTTCGCTTTATCGAGATCTAACTAGTGAAAGGCTCGTGT
GATAAaacaaattatgaaatatttatttcGCTTCCAGGCAATTGACTTTG
TGCTGGAGCTCCTTATTATATAATTTGTAATAAACAACAAAGCAACTGTG
ACGAACACTTAAAACATAGTCTACCTCTTTTTGCCATTCGCCACGAACCC
CTTGAACCAAACCATTCGTCACGAACGGTTTGGATTTGACCCTATTTGAA
AAGCGTTCGTGAAAAATGCACAAGCATTCGTCATGAACGCTTAGACTTTC
GCTTAAAAGCAAAGCGTTCGTCGTGAANNNNNNNNNNNNNNNNNNCGTTA
TAAATCATAAAGCATTCGTGACAAACGCCTCCCTGttaaagcgttcgtca
cgaATGAGTCGAAATCTAGAAAGCGTTtgtgacgaacgctttaaaAGAAA
CTCGCTCGAAAAGCATTCGTGGCGAACGGATAGACCGTTCGTGACGAATG
ACTGACCGTTCGTGTGTCCACGACGAATGCTTTTCGTTCCAGTAGTGTCA
TTTCAAcgaaggaccaaaaaaattctaaaatctctATTTCAATTGATGGT
CAGGTCCACTCTAGCCCTGACAAAGTTGCTAATCACTTCAACAATTTCTT
TACGTCCATTGCTGATAATATCAGAGAAAAAATTCCTCcatcttttcaaa
acttttccaatttCCTTAAACACAGAAACCAAAACTCCATATTTCTTAGG
CCTACATCTTCTGATGAGGTTGCTAAGATAATTGGGTCCTTTTCTTCCTC
TAAGTCATCTGGACCAAACAGTATTCCAATAAAAATCCTAAAATTACTTC
AAGATAAAATCTCTAAACCTCTCTCTGTTTTAATAAATCAATCCTACACA
ACTGGAATTTTTCCCAATGTACTAAAAATTTCTAAAGTAATTCCAGTCTT
CAAAAATAAAGGATCTCCACTAGAAGTATCAAATTATCGCCCTATTTCTC
TCTTGTCCaatatcgaaaaaatatatGAGAAAATTATGTATTCTCGAGTt
attgaatttttcaaccaatttaACCAAATTTATGCACGACAATTTGGCTT
TCGAAAAGGTCACTCAACCTCTCACACCCTGATGAACATTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016452-exon-sc0000237-1491911889:313044..314637 | TCONS_00016452-exon-sc0000237-1491911889:313044..314637 | Clytia hemisphaerica | exon |
| TCONS_00016452-exon-sc0000237-1510915933:313044..314637 | TCONS_00016452-exon-sc0000237-1510915933:313044..314637 | Clytia hemisphaerica | exon |
| TCONS_00016452-exon-sc0000237-1575043694:313044..314637 | TCONS_00016452-exon-sc0000237-1575043694:313044..314637 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000237 | supercontig | sc0000237:313044..314637 . |
Blast
The following BLAST results are available for this feature:
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