TCONS_00016453 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016453
Unique NameTCONS_00016453
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2112

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016453 ID=TCONS_00016453|Name=TCONS_00016453|organism=Clytia hemisphaerica|type=transcript|length=2112bp
AAACAATTGACGAGAGGTCAGAAGAAGCAATCAAGTTTAgaagaagaaaa
gtttgaagagaGACAATTGTCAACGAAAgtgttttacaaaaaatgaaaac
gatGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGGTGCGTTAA
TTGATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATGTTCAGTAC
AATTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATCAATCTCAA
GCATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTACGTATAGTG
TCAGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAAAAGGAGAT
TGTAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAATGTGAAAT
TCTGGGAACTGACATTTACAAATCTAGAAATAATATTGTACCTGCAAATG
ATTCAATTCACTCTTTGATTTCTAATGGATGTTTGAAAAACCCTTGCAAG
AAATCAGAAGTATGCTTCCCTAATTACGCAGATAACACATATCAATGTCT
TTTTTCTACATTTGCATTTGAAAGCGGAGACGTATATTTAACAACGCCAG
AAGAAGATTACTGTTTGGAACCTGAGACAAAGAGTTGTGATTTTGTGGAC
AATACTACCCTTGTCTATAGAACAaccagtaaacattgcaatcaaAAATA
TGCAGTCTTCAATTACGACCTCCTATCAAGAAAGCTTATTCATAAATGTA
GCAAGAAAGAAGTATGCGGTCAATCTCTTCTAGGTAATGGTGCTCCCTTG
GTTTTGAATTCGTCATGCACAGATCAGCAGAAGGATGGAAGATTTTTGAG
AACTCTTTATAATTCCATCCAATTCCATGCCTTTTGCTTGAGTCCTACTT
CTAGCATTCCTCTGAATGATGGCCCGAAAGTTATGGCGCTCCGATCAAAT
ACAGGGGGCTGTGCCATTCAAGAGAGCAAACTATTGATGCATCCGAGTCC
AGCccaaaaaaaggtcaaaatttcaatgttttattACTACGCTACATCAA
TCGCAAGAGCAAATGCCTACCCTAATTATCCACAATCACCAGATTACATC
GGATATGCAGATAATTTTGATATGGGTAGAAACTTCAGAGATGGTTATTT
CGCGCGTCTTCAAGCATATTTCATTGCTCCACAATCCGGTTTATACAGAT
TTGTAGTAGCCTGTGACGATGCAGGGGATTTGTATATTTCAAACAACAAG
ACGGACGAGGTCAATAAACAAAAGATTGCTTATCAGACAAATTATGTCGA
TTACAACGCTTGGGATTGgCGAATAGGACAAGAATCTGATCCGATTGCTT
TGGAATCTGGAGAAGTCTATTATTTGGAAGGTTTATTGTTGGAGTTTGGT
GGAGGTGAGCACTTTCAAGTTGGAGTACATTTACCAGACGGAACTTCGCT
ACTTCCAATCACAAATGAATACCTCCAACGATTTGTCTAAAATCAATTCG
CAAGTGTTCGTCTTTTTTATACCCTGTGGAAAGATTGTAGTCATAATCAC
AGTTGTATCCACGAGAGTGGTTTCCACTGGAAAAAAGTGCACTAATACGA
GGGTCTCCAACAAGAAATACCAAAGCAGTAATTACCCGTAAAATGTTACT
TAGTCACCACGTGGCGTTTTAAAATTGAAGGCACTGATTTCTTCAAACAG
CAAAACACTGACACATTAAGGCatatggatattcttataacttTTGAGAA
AGAGATTCAGAACAAGATCTATACGCTGCTGAAAGTTATTGTCAAATGCG
TGTCAGTTGTCTTCCCTGTCGTGAAATAAGGGTCTTCTTATTCTCACTCT
CAACtgcaagaataaataaatatattttttcaaggttggatattttttat
tttttcaacaattttctatcgtgtattttttaggGAAAAGTTGTAATGTT
TTAAAaggtttttgtcaattttttttttaattcttaattcatttgtgtaa
aactcaaattttgagTTGAGGGGTGTGCTCTCAAATTGTGTTTACTTTTT
GGCGATTTCGAACTTTATTGAAGTTCTCTTgtacaaagaaaatatttatg
aCATAATTCATC
Run BLAST on NCBI

protein sequence of TCONS_00016453-protein

>TCONS_00016453-protein ID=TCONS_00016453-protein|Name=TCONS_00016453-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
MKTMKSLSFMHYFILFGALIDNVIFCRKEFSPNVQYNSPHPNASFNYSYI
NLKHLKGYKLDVTPLATYSVSSRSLCVKECVKTKGDCKSINTRQVANKLE
CEILGTDIYKSRNNIVPANDSIHSLISNGCLKNPCKKSEVCFPNYADNTY
QCLFSTFAFESGDVYLTTPEEDYCLEPETKSCDFVDNTTLVYRTTSKHCN
QKYAVFNYDLLSRKLIHKCSKKEVCGQSLLGNGAPLVLNSSCTDQQKDGR
FLRTLYNSIQFHAFCLSPTSSIPLNDGPKVMALRSNTGGCAIQESKLLMH
PSPAQKKVKISMFYYYATSIARANAYPNYPQSPDYIGYADNFDMGRNFRD
GYFARLQAYFIAPQSGLYRFVVACDDAGDLYISNNKTDEVNKQKIAYQTN
YVDYNAWDWRIGQESDPIALESGEVYYLEGLLLEFGGGEHFQVGVHLPDG
TSLLPITNEYLQRFV
Run BLAST on NCBI

transcript from alignment at sc0000240:36071..41558+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016453 ID=TCONS_00016453|Name=TCONS_00016453|organism=Clytia hemisphaerica|type=transcript|length=5488bp|location=Sequence derived from alignment at sc0000240:36071..41558+ (Clytia hemisphaerica)
AAACAATTGACGAGAGGTCAGAAGAAGCAATCAAGTTTAgaagaagaaaa
gtttgaagagaGACAATTGTCAACGAAAgtgttttacaaaaaatgaaaac
gatGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGGTGCGTTAA
TTGATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATGTTCAGTAC
AATTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATCAATCTCAA
GCATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTACGTATAGTG
TCAGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAAAAGGAGAT
TGTAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAATGTGAAAT
TCTGGGAACTGACATTTACAAATCTAGAAATAATATTGTACCTGCAAATG
ATTCAATTCACTCTTTGATTTCTGTAAGTTCCATTTTTAGTTCCATTTTT
AGTTGCATTTTTAGTTGAATTTGAGTTGCTTTGAAACAGGACTATTATAA
CAACATTTAGctccaaaaagttttatttttacacaagtgttcccgtttca
taccagACACATGTTTTATGTCAGGAAAGTCTGTTATAAtgtgttatatt
gtgctgatataagcaacaaaatatttttcttttcctctttctgaccaatc
ttgctccacatccaccGTGTCAATGCAATGTAAAAGAGCCCCCCCAAAAG
ATTTTCCAAGTCATGTTTAACtagttaaatttcctttctatcacAATCAC
ATTGATCCCGTCGGTTCctccgatcacgcaatcacgctcTTTAAAATCTT
AAGGGCtatgaccatagtcagaaaattgattttagtatttgaacataaaa
gttataagggcaattctttgttaaaagtgttaaagaacctaaaacctAAA
ACATAGATGTCTtcttaatcaaatcccttaagagtaattaagaatttaat
tgcaaaaatgacgttatgaactttaaaaagaccttcttttataaaaaatg
ccAAGTTTAAATGGGttttaattaacctttttgtttcNTTTTATAAAAAA
TGCCAAGTTTTAATGGGttttaattaacctttttgtttcgaagttttttt
aaactgtccgcaaagaattgaactgttttaggttttcggaaaatttttct
atattAAGGCATCAAAAGCTAttgctgtttttctatgaaagaattggatg
gaaaattggtcagaAAGCTCTATAAAtaaacttttagaaaaatttccagt
ttggtaaaagatacaccatctaccgcaaaaaaaaaattcaaaattttttt
tcttcgtcgaaaataagctcttcaaagttgaaatactcttcttcgcaaaa
gtcttcattttcttcttcattaaattttttcattgtgattcttaaatttt
cagaatcaaggataattggcctaacagaatatgtataacatgccacagtt
ttgtgggctacCTCAactagaaatttatattttgtacgtggcaaataata
aaaattcaCGAAATCACAAACTTGAAAATCACGCCATCGTGAAAACCACT
TGGGGCCtcataaaaaagcttgtaaattaaaattgtcgagtaagcaaacg
atatcactcttacttAAATATTTAGCTTTTGGAAGTTGAAGTAGGTTAAA
GAACATCCTAGAGCTTTTGAACGATTTAAACAATAGGACCTTTAGTTAGT
CGTTTTGGTAGTCTGAAAAATTGCTTACTGTATATACAACATCATCTTTC
AATTATCATTTTGTAAATGTTTCGTTGTTTTATAGAATGGATGTTTGAAA
AACCCTTGCAAGAAATCAGAAGTATGCTTCCCTAATTACGCAGATAACAC
ATATCAATGTCTTTTTTCTACATTTGCATTTGAAAGCGGAGGTTGGTCAA
AAGTTTATTTCAAATTCatcaatattcaaattttttaatggtttttaaaa
atacattcttAGAAGCATCCATGAAACTGTAAGTCTCAAAGTACCTTTGT
CTTGCTAGATATTGCTCTTATTTTGTTAGTCGAGCCTTTTCAAATGAGAT
GTTTTCTGTGTTGTGCTACATGACTGGCGATCTCAAGTCAATAAAATACA
CCTCCATTCTTTTTAGACGTATATTTAACAACGCCAGAAGAAGATTACTG
TTTGGAACCTGAGACAAAGAGTTGTGATTTTGTGGACAATACTACCCTTG
TCTATAGAACAaccagtaaacattgcaatcaaAAATATGCAGTCTTCAAT
TACGACCTCCTATCAAGAAAGCTTATTCATAAATGTAGCAAGAAAGAAGT
ATGCGGTCAATCTCTTCTAGGTAATGGTGCTCCCTTGGTTTTGAATTCGT
CATGCACAGATCAGCAGAAGGATGGAAGATTTTTGAGAACTCTTTGTAAG
TTTTTTTCTTATACCATTCTGTCATCACCAGATTTCTTCTTGGCTCAAGG
TTTTGTGACTGCTTCTTCAAAGCTAATTCCCTCTAAAACTCTATTCCACG
CGAGATACATTTCCCCGATAGTTTACATTGCGTTTTCAATAaagatgaga
tatgttttttataattaaGTTGTGAATTCTAAGTTNCTACATTGCGTTTT
AAATAaagatgagatatgttttttataatttaagTTGTGAATTTTAAGTT
GGATTATATTCGAGATTGCTGTTTGAAAGATTCGTAGTTTTAACTTGAAC
TCGCAAATTGTATCCACTTTCAGATAATTCCATCCAATTCCATGCCTTTT
GCTTGAGTCCTACTTCTAGCATTCCTCTGAATGATGGCCCGAAAGTTATG
GCGCTCCGATCAAATACAGGGGGCTGTGCCATTCAAGAGAGCAAACTATT
GATGCATCCGAGTCCAGGTAAGATGAATGAATTCTCGTGAAGAATCAATG
GAAATTAGATTCCGTATAAGGTTAGGGTCTCCATTCTCCCGCCAACAGAT
TGCCTCGAATTCATTCTTCTGTTCTTAACTCTTTTTCTGCATTGGATAAA
AATAGTATTTCATTGCATAGAATCTGAGGACGACGGTTACACAATACTTA
CCATCCTCGATATGCTCCTATCCATTTCAGTCACTGCCAGGTTTTAAAAG
ATTAGGTACAAACTTATTAATCAGAGCATGCACAAAATCACCATCTAATT
TGAATCTTTATGGCCTCTATCAAATAATTACAGCCTTTCTTGTATTCCTT
GCAGAGTATGATGTGAAGTTTAATAGCTGATTGTTTGCCGCGATCAAAAG
ATATCTTttgaataataatatttttattttctgtaCCAGCccaaaaaaag
gtcaaaatttcaatgttttattACTACGCTACATCAATCGCAAGAGCAAA
TGCCTACCCTAATTATCCACAATCACCAGATTACATCGGATATGCAGATA
ATTTTGATATGGGTAGAAACTTCAGAGATGGTTATTTCGCGCGTCTTCAA
GCATATTTCATTGCTCCACAATCCGGTTTATACAGATTTGTAGTAGCCTG
TGACGATGCAGGGGATTTGTATATTTCAAACAACAAGACGGACGAGGTCA
ATAAACAAAAGATTGCTTATCAGACAAATTATGTCGATTACAACGCTTGG
GATTGGTAAGTAACTTCAACCAACTAAAACACATTATTTCTGTTTCAAAG
CTCACATGAcaaaacacccctttctcaaaAACCTCTTTCCACTGGAAGTA
CgggcccggcggaagcggggaggcttttgagcaaatgagatatTTTTTCG
AATTCCACGCAAATTTAATCTCATTTTGAGCcctcagcctccccactttt
atggTGGTTCCGCCGGGGCCTGAAGCATCTTCCCCAGTGGTAAATTATAC
TCCGATTTTTGTCTTCgctgaaaatgatcaaataaacaaatcctcactgc
aaaatattcggctattttttttttttctatctccACTGAATATTTTGACT
TCGAAACAATGGAACTCAAATTCCTAGCCataaacatgggaatatcaatc
ccccgagtttcagtccgttgttCTTTACTGAAAAAACCCTaccgggtctg
cgagaaggggaTATCATTGGCATTCTGGATGGTATACTGACATCATTTTG
TCGCTTTAAACCAGTTGGGTAACAGGTGGATGTCTTAATCGAGCTTACAA
GTGCAAGTCTATAGATTTGTTCCTGGAAAATTTAACTAATGTTTTTCGTG
TCCTCTTTCTGAACAATCTTTCTCcgcatccgtgtcaattcaatgtgaga
aagcttgtgaattaaaattgatgagtaagtaaACGATGTcaacttattta
aaaaaacacaaTCTttaaaactagacggtgaaatagtttacagatTGGAT
AATCAAGGTTGCGGCAAAACTGTTAAGATAAACGGTTAAGTCAAACTGTT
CATGTAAGATGCTTTGGAAGTATTCCACCATAACTAAGTCATAAACCGTT
TGGTATTACTGACAGCCAGCGCAAGAAACGCATTTCTTTTACGATCACAG
TTTGCATTTCAAAGGAAGTCTAAGCTTTAGAACTTACGGTACTGAATCTT
TAAGCAGATGAGAGAAagaaattaagacaaaaaaatacGGAGGTCTGCTT
TAGAGTAGAGTCGTAAAgatcatttatattttttacttttacaggCGAAT
AGGACAAGAATCTGATCCGATTGCTTTGGAATCTGGAGAAGTCTATTATT
TGGAAGGTTTATTGTTGGAGTTTGGTGGAGGTGAGCACTTTCAAGTTGGA
GTACATTTACCAGACGGAACTTCGCTACTTCCAATCACAAATGAATACCT
CCAACGATTTGTCTAAAATCAATTCGCAAGTGTTCGTCTTTTTTATACCC
TGTGGAAAGATTGTAGTCATAATCACAGTTGTATCCACGAGAGTGGTTTC
CACTGGAAAAAAGTGCACTAATACGAGGGTCTCCAACAAGAAATACCAAA
GCAGTAATTACCCGTAAAATGTTACTTAGTCACCACGTGGCGTTTTAAAA
TTGAAGGCACTGATTTCTTCAAACAGCAAAACACTGACACATTAAGGCat
atggatattcttataacttTTGAGAAAGAGATTCAGAACAAGATCTATAC
GCTGCTGAAAGTTATTGTCAAATGCGTGTCAGTTGTCTTCCCTGTCGTGA
AATAAGGGTCTTCTTATTCTCACTCTCAACtgcaagaataaataaatata
ttttttcaaggttggatattttttattttttcaacaattttctatcgtgt
attttttaggGAAAAGTTGTAATGTTTTAAAaggtttttgtcaatttttt
ttttaattcttaattcatttgtgtaaaactcaaattttgagTTGAGGGGT
GTGCTCTCAAATTGTGTTTACTTTTTGGCGATTTCGAACTTTATTGAAGT
TCTCTTgtacaaagaaaatatttatgaCATAATTCATC

Coding sequence (CDS) from alignment at sc0000240:36071..41558+

>TCONS_00016453 ID=TCONS_00016453|Name=TCONS_00016453|organism=Clytia hemisphaerica|type=CDS|length=8388bp|location=Sequence derived from alignment at sc0000240:36071..41558+ (Clytia hemisphaerica)
atgaaaacgatGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGG
TGCGTTAATTGATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATG
TTCAGTACAATTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATC
AATCTCAAGCATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTAC
GTATAGTGTCAGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAA
AAGGAGATTGTAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAA
TGTGAAATTCTGGGAACTGACATTTACAAATCTAGAAATAATATTGTACC
TGCAAATGATTCAATTCACTCTTTGATTTCTAATGGATGTTTGAAAAACC
CTTGCAAGAAATCAGAAGTATGCTTCCCTAATTACGCAGATAACACATAT
CAATGTCTTTTTTCTACATTTGCATTTGAAAGCGGAGACGTATATTTAAC
AACGCCAGAAGAAGATTACTGTTTGGAACCTGAGACAAAGAGTTGTGATT
TTGTGGACAATACTACCCTTGTCTATAGAACAaccagtaaacattgcaat
caaAAATATGCAGTCTTCAATTACGACCTCCTATCAAGAAAGCTTATTCA
TAAATGTAGCAAGAAAGAAGTATGCGGTCAATCTCTTCTAGGTAATGGTG
CTCCCTTGGTTTTGAATTCGTCATGCACAGATCAGCAGAAGGATGGAAGA
TTTTTGAGAACTCTTTATAATTCCATCCAATTCCATGCCTTTTGCTTGAG
TCCTACTTCTAGCATTCCTCTGAATGATGGCCCGAAAGTTATGGCGCTCC
GATCAAATACAGGGGGCTGTGCCATTCAAGAGAGCAAACTATTGATGCAT
CCGAGTCCAGCccaaaaaaaggtcaaaatttcaatgttttattACTACGC
TACATCAATCGCAAGAGCAAATGCCTACCCTAATTATCCACAATCACCAG
ATTACATCGGATATGCAGATAATTTTGATATGGGTAGAAACTTCAGAGAT
GGTTATTTCGCGCGTCTTCAAGCATATTTCATTGCTCCACAATCCGGTTT
ATACAGATTTGTAGTAGCCTGTGACGATGCAGGGGATTTGTATATTTCAA
ACAACAAGACGGACGAGGTCAATAAACAAAAGATTGCTTATCAGACAAAT
TATGTCGATTACAACGCTTGGGATTGgCGAATAGGACAAGAATCTGATCC
GATTGCTTTGGAATCTGGAGAAGTCTATTATTTGGAAGGTTTATTGTTGG
AGTTTGGTGGAGGTGAGCACTTTCAAGTTGGAGTACATTTACCAGACGGA
ACTTCGCTACTTCCAATCACAAATGAATACCTCCAACGATTTGTCTAAat
gaaaacgatGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGGTG
CGTTAATTGATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATGTT
CAGTACAATTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATCAA
TCTCAAGCATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTACGT
ATAGTGTCAGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAAAA
GGAGATTGTAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAATG
TGAAATTCTGGGAACTGACATTTACAAATCTAGAAATAATATTGTACCTG
CAAATGATTCAATTCACTCTTTGATTTCTAATGGATGTTTGAAAAACCCT
TGCAAGAAATCAGAAGTATGCTTCCCTAATTACGCAGATAACACATATCA
ATGTCTTTTTTCTACATTTGCATTTGAAAGCGGAGACGTATATTTAACAA
CGCCAGAAGAAGATTACTGTTTGGAACCTGAGACAAAGAGTTGTGATTTT
GTGGACAATACTACCCTTGTCTATAGAACAaccagtaaacattgcaatca
aAAATATGCAGTCTTCAATTACGACCTCCTATCAAGAAAGCTTATTCATA
AATGTAGCAAGAAAGAAGTATGCGGTCAATCTCTTCTAGGTAATGGTGCT
CCCTTGGTTTTGAATTCGTCATGCACAGATCAGCAGAAGGATGGAAGATT
TTTGAGAACTCTTTATAATTCCATCCAATTCCATGCCTTTTGCTTGAGTC
CTACTTCTAGCATTCCTCTGAATGATGGCCCGAAAGTTATGGCGCTCCGA
TCAAATACAGGGGGCTGTGCCATTCAAGAGAGCAAACTATTGATGCATCC
GAGTCCAGCccaaaaaaaggtcaaaatttcaatgttttattACTACGCTA
CATCAATCGCAAGAGCAAATGCCTACCCTAATTATCCACAATCACCAGAT
TACATCGGATATGCAGATAATTTTGATATGGGTAGAAACTTCAGAGATGG
TTATTTCGCGCGTCTTCAAGCATATTTCATTGCTCCACAATCCGGTTTAT
ACAGATTTGTAGTAGCCTGTGACGATGCAGGGGATTTGTATATTTCAAAC
AACAAGACGGACGAGGTCAATAAACAAAAGATTGCTTATCAGACAAATTA
TGTCGATTACAACGCTTGGGATTGgCGAATAGGACAAGAATCTGATCCGA
TTGCTTTGGAATCTGGAGAAGTCTATTATTTGGAAGGTTTATTGTTGGAG
TTTGGTGGAGGTGAGCACTTTCAAGTTGGAGTACATTTACCAGACGGAAC
TTCGCTACTTCCAATCACAAATGAATACCTCCAACGATTTGTCTAAatga
aaacgatGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGGTGCG
TTAATTGATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATGTTCA
GTACAATTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATCAATC
TCAAGCATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTACGTAT
AGTGTCAGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAAAAGG
AGATTGTAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAATGTG
AAATTCTGGGAACTGACATTTACAAATCTAGAAATAATATTGTACCTGCA
AATGATTCAATTCACTCTTTGATTTCTAATGGATGTTTGAAAAACCCTTG
CAAGAAATCAGAAGTATGCTTCCCTAATTACGCAGATAACACATATCAAT
GTCTTTTTTCTACATTTGCATTTGAAAGCGGAGACGTATATTTAACAACG
CCAGAAGAAGATTACTGTTTGGAACCTGAGACAAAGAGTTGTGATTTTGT
GGACAATACTACCCTTGTCTATAGAACAaccagtaaacattgcaatcaaA
AATATGCAGTCTTCAATTACGACCTCCTATCAAGAAAGCTTATTCATAAA
TGTAGCAAGAAAGAAGTATGCGGTCAATCTCTTCTAGGTAATGGTGCTCC
CTTGGTTTTGAATTCGTCATGCACAGATCAGCAGAAGGATGGAAGATTTT
TGAGAACTCTTTATAATTCCATCCAATTCCATGCCTTTTGCTTGAGTCCT
ACTTCTAGCATTCCTCTGAATGATGGCCCGAAAGTTATGGCGCTCCGATC
AAATACAGGGGGCTGTGCCATTCAAGAGAGCAAACTATTGATGCATCCGA
GTCCAGCccaaaaaaaggtcaaaatttcaatgttttattACTACGCTACA
TCAATCGCAAGAGCAAATGCCTACCCTAATTATCCACAATCACCAGATTA
CATCGGATATGCAGATAATTTTGATATGGGTAGAAACTTCAGAGATGGTT
ATTTCGCGCGTCTTCAAGCATATTTCATTGCTCCACAATCCGGTTTATAC
AGATTTGTAGTAGCCTGTGACGATGCAGGGGATTTGTATATTTCAAACAA
CAAGACGGACGAGGTCAATAAACAAAAGATTGCTTATCAGACAAATTATG
TCGATTACAACGCTTGGGATTGgCGAATAGGACAAGAATCTGATCCGATT
GCTTTGGAATCTGGAGAAGTCTATTATTTGGAAGGTTTATTGTTGGAGTT
TGGTGGAGGTGAGCACTTTCAAGTTGGAGTACATTTACCAGACGGAACTT
CGCTACTTCCAATCACAAATGAATACCTCCAACGATTTGTCTAAatgaaa
acgatGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGGTGCGTT
AATTGATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATGTTCAGT
ACAATTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATCAATCTC
AAGCATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTACGTATAG
TGTCAGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAAAAGGAG
ATTGTAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAATGTGAA
ATTCTGGGAACTGACATTTACAAATCTAGAAATAATATTGTACCTGCAAA
TGATTCAATTCACTCTTTGATTTCTAATGGATGTTTGAAAAACCCTTGCA
AGAAATCAGAAGTATGCTTCCCTAATTACGCAGATAACACATATCAATGT
CTTTTTTCTACATTTGCATTTGAAAGCGGAGACGTATATTTAACAACGCC
AGAAGAAGATTACTGTTTGGAACCTGAGACAAAGAGTTGTGATTTTGTGG
ACAATACTACCCTTGTCTATAGAACAaccagtaaacattgcaatcaaAAA
TATGCAGTCTTCAATTACGACCTCCTATCAAGAAAGCTTATTCATAAATG
TAGCAAGAAAGAAGTATGCGGTCAATCTCTTCTAGGTAATGGTGCTCCCT
TGGTTTTGAATTCGTCATGCACAGATCAGCAGAAGGATGGAAGATTTTTG
AGAACTCTTTATAATTCCATCCAATTCCATGCCTTTTGCTTGAGTCCTAC
TTCTAGCATTCCTCTGAATGATGGCCCGAAAGTTATGGCGCTCCGATCAA
ATACAGGGGGCTGTGCCATTCAAGAGAGCAAACTATTGATGCATCCGAGT
CCAGCccaaaaaaaggtcaaaatttcaatgttttattACTACGCTACATC
AATCGCAAGAGCAAATGCCTACCCTAATTATCCACAATCACCAGATTACA
TCGGATATGCAGATAATTTTGATATGGGTAGAAACTTCAGAGATGGTTAT
TTCGCGCGTCTTCAAGCATATTTCATTGCTCCACAATCCGGTTTATACAG
ATTTGTAGTAGCCTGTGACGATGCAGGGGATTTGTATATTTCAAACAACA
AGACGGACGAGGTCAATAAACAAAAGATTGCTTATCAGACAAATTATGTC
GATTACAACGCTTGGGATTGgCGAATAGGACAAGAATCTGATCCGATTGC
TTTGGAATCTGGAGAAGTCTATTATTTGGAAGGTTTATTGTTGGAGTTTG
GTGGAGGTGAGCACTTTCAAGTTGGAGTACATTTACCAGACGGAACTTCG
CTACTTCCAATCACAAATGAATACCTCCAACGATTTGTCTAAatgaaaac
gatGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGGTGCGTTAA
TTGATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATGTTCAGTAC
AATTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATCAATCTCAA
GCATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTACGTATAGTG
TCAGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAAAAGGAGAT
TGTAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAATGTGAAAT
TCTGGGAACTGACATTTACAAATCTAGAAATAATATTGTACCTGCAAATG
ATTCAATTCACTCTTTGATTTCTAATGGATGTTTGAAAAACCCTTGCAAG
AAATCAGAAGTATGCTTCCCTAATTACGCAGATAACACATATCAATGTCT
TTTTTCTACATTTGCATTTGAAAGCGGAGACGTATATTTAACAACGCCAG
AAGAAGATTACTGTTTGGAACCTGAGACAAAGAGTTGTGATTTTGTGGAC
AATACTACCCTTGTCTATAGAACAaccagtaaacattgcaatcaaAAATA
TGCAGTCTTCAATTACGACCTCCTATCAAGAAAGCTTATTCATAAATGTA
GCAAGAAAGAAGTATGCGGTCAATCTCTTCTAGGTAATGGTGCTCCCTTG
GTTTTGAATTCGTCATGCACAGATCAGCAGAAGGATGGAAGATTTTTGAG
AACTCTTTATAATTCCATCCAATTCCATGCCTTTTGCTTGAGTCCTACTT
CTAGCATTCCTCTGAATGATGGCCCGAAAGTTATGGCGCTCCGATCAAAT
ACAGGGGGCTGTGCCATTCAAGAGAGCAAACTATTGATGCATCCGAGTCC
AGCccaaaaaaaggtcaaaatttcaatgttttattACTACGCTACATCAA
TCGCAAGAGCAAATGCCTACCCTAATTATCCACAATCACCAGATTACATC
GGATATGCAGATAATTTTGATATGGGTAGAAACTTCAGAGATGGTTATTT
CGCGCGTCTTCAAGCATATTTCATTGCTCCACAATCCGGTTTATACAGAT
TTGTAGTAGCCTGTGACGATGCAGGGGATTTGTATATTTCAAACAACAAG
ACGGACGAGGTCAATAAACAAAAGATTGCTTATCAGACAAATTATGTCGA
TTACAACGCTTGGGATTGgCGAATAGGACAAGAATCTGATCCGATTGCTT
TGGAATCTGGAGAAGTCTATTATTTGGAAGGTTTATTGTTGGAGTTTGGT
GGAGGTGAGCACTTTCAAGTTGGAGTACATTTACCAGACGGAACTTCGCT
ACTTCCAATCACAAATGAATACCTCCAACGATTTGTCTAAatgaaaacga
tGAAATCATTAAGTTTTATGCATTACTTTATTTTATTTGGTGCGTTAATT
GATAATGTAATATTTTGTCGGAAAGAATTCTCGCCAAATGTTCAGTACAA
TTCGCCACACCCGAACGCCTCCTTCAATTACAGTTACATCAATCTCAAGC
ATTTGAAAGGGTATAAATTGGACGTCACACCTCTGGCTACGTATAGTGTC
AGCAGTAGATCACTTTGTGTGAAAGAATGTGTCAAAACAAAAGGAGATTG
TAAGAGCATCAATACTCGACAAGTGGCCAATAAGTTAGAATGTGAAATTC
TGGGAACTGACATTTACAAATCTAGAAATAATATTGTACCTGCAAATGAT
TCAATTCACTCTTTGATTTCTAATGGATGTTTGAAAAACCCTTGCAAGAA
ATCAGAAGTATGCTTCCCTAATTACGCAGATAACACATATCAATGTCTTT
TTTCTACATTTGCATTTGAAAGCGGAGACGTATATTTAACAACGCCAGAA
GAAGATTACTGTTTGGAACCTGAGACAAAGAGTTGTGATTTTGTGGACAA
TACTACCCTTGTCTATAGAACAaccagtaaacattgcaatcaaAAATATG
CAGTCTTCAATTACGACCTCCTATCAAGAAAGCTTATTCATAAATGTAGC
AAGAAAGAAGTATGCGGTCAATCTCTTCTAGGTAATGGTGCTCCCTTGGT
TTTGAATTCGTCATGCACAGATCAGCAGAAGGATGGAAGATTTTTGAGAA
CTCTTTATAATTCCATCCAATTCCATGCCTTTTGCTTGAGTCCTACTTCT
AGCATTCCTCTGAATGATGGCCCGAAAGTTATGGCGCTCCGATCAAATAC
AGGGGGCTGTGCCATTCAAGAGAGCAAACTATTGATGCATCCGAGTCCAG
CccaaaaaaaggtcaaaatttcaatgttttattACTACGCTACATCAATC
GCAAGAGCAAATGCCTACCCTAATTATCCACAATCACCAGATTACATCGG
ATATGCAGATAATTTTGATATGGGTAGAAACTTCAGAGATGGTTATTTCG
CGCGTCTTCAAGCATATTTCATTGCTCCACAATCCGGTTTATACAGATTT
GTAGTAGCCTGTGACGATGCAGGGGATTTGTATATTTCAAACAACAAGAC
GGACGAGGTCAATAAACAAAAGATTGCTTATCAGACAAATTATGTCGATT
ACAACGCTTGGGATTGgCGAATAGGACAAGAATCTGATCCGATTGCTTTG
GAATCTGGAGAAGTCTATTATTTGGAAGGTTTATTGTTGGAGTTTGGTGG
AGGTGAGCACTTTCAAGTTGGAGTACATTTACCAGACGGAACTTCGCTAC
TTCCAATCACAAATGAATACCTCCAACGATTTGTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009190XLOC_009190Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016453-proteinTCONS_00016453-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016453-exon-sc0000240-1491911889:36071..36543TCONS_00016453-exon-sc0000240-1491911889:36071..36543Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1510915933:36071..36543TCONS_00016453-exon-sc0000240-1510915933:36071..36543Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1575043694:36071..36543TCONS_00016453-exon-sc0000240-1575043694:36071..36543Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1491911889:37906..38011TCONS_00016453-exon-sc0000240-1491911889:37906..38011Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1510915933:37906..38011TCONS_00016453-exon-sc0000240-1510915933:37906..38011Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1575043694:37906..38011TCONS_00016453-exon-sc0000240-1575043694:37906..38011Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1491911889:38237..38515TCONS_00016453-exon-sc0000240-1491911889:38237..38515Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1510915933:38237..38515TCONS_00016453-exon-sc0000240-1510915933:38237..38515Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1575043694:38237..38515TCONS_00016453-exon-sc0000240-1575043694:38237..38515Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1491911889:38844..38987TCONS_00016453-exon-sc0000240-1491911889:38844..38987Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1510915933:38844..38987TCONS_00016453-exon-sc0000240-1510915933:38844..38987Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1575043694:38844..38987TCONS_00016453-exon-sc0000240-1575043694:38844..38987Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1491911889:39410..39725TCONS_00016453-exon-sc0000240-1491911889:39410..39725Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1510915933:39410..39725TCONS_00016453-exon-sc0000240-1510915933:39410..39725Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1575043694:39410..39725TCONS_00016453-exon-sc0000240-1575043694:39410..39725Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1491911889:40765..41558TCONS_00016453-exon-sc0000240-1491911889:40765..41558Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1510915933:40765..41558TCONS_00016453-exon-sc0000240-1510915933:40765..41558Clytia hemisphaericaexon
TCONS_00016453-exon-sc0000240-1575043694:40765..41558TCONS_00016453-exon-sc0000240-1575043694:40765..41558Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000240supercontigsc0000240:36071..41558 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0545398	0.0422173	0	0.0251412	0.0198669	0.407466	0.448782	1.20968	0.797842	0.944396	0.931213	3.80647	4.15908	0.561066	0.670273	0.195934	0.358618	4.81577	5.55781	1.20769	0.712156	0.470267	1.12715	1.08088	2.05436	0.204507	0.109128	0.0413847	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011658PA14_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016453 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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