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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016458 ID=TCONS_00016458|Name=TCONS_00016458|organism=Clytia hemisphaerica|type=transcript|length=570bp
TAGATATTCCGTTTGAATTTCCCTTAAAATAACGAAAAAAGgtataaaaa
ctcaaaaaacctAACATCAGCTATCAGATTGAACAGCACCTTCAAACACT
TACTGAAAAATCAAACAAGCACGTTTTTTCTGCAAAACATCGAAGCATCA
AACTTCTCCTTTCTTCCAAGAAACATTATGAAGACTTTCATCGTATTCGT
TGCACTCTGTATTGCTTTATCGACAGCTTATAGCGTACAAAGAGGAAATA
AACCGCCAAAAGGAGATGCATTTAGAAACCGTGTTAGAGATTACATTTTG
AAGAGAGCACTAAATTCGGTCAAGTTTGACGGCCAATGTTCTAATGAGCT
TAGTGAATGGGAATGTGCAATGGAACTCGAACTCGCAGGTGGAGATTGCA
ACACAACAGAGTTTCCTTTCGAAGCAAAATGTCGAAAATATTGTGAATTT
TGTTGataatatttttagtcaaagaCTTTATAAAATATATTCCCATtgag
tcaaaatatttttactttgaatCTTCGTGTTATTTTACCTGAATTATCTT
GAAAACAACGCAATGACAAC Run BLAST on NCBI transcript from alignment at sc0000240:60021..61168+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016458 ID=TCONS_00016458|Name=TCONS_00016458|organism=Clytia hemisphaerica|type=transcript|length=1148bp|location=Sequence derived from alignment at sc0000240:60021..61168+ (Clytia hemisphaerica)
TAGATATTCCGTTTGAATTTCCCTTAAAATAACGAAAAAAGgtataaaaa
ctcaaaaaacctAACATCAGCTATCAGATTGAACAGCACCTTCAAACACT
TACTGAAAAATCAAACAAGCACGTTTTTTCTGCAAAACATCGAAGCATCA
AACTTCTCCTTTCTTCCAAGAAACATTATGAAGACTTTCATCGTATTCGT
TGCACTCTGTATTGCTTTATCGACAGCTTGTAAGTATTCGACTTAAAAGT
AAACATTTGATAGTTTGGATTGGGATAGTGTTCTGGCCCATAGCTTACTT
CTTTCTATCTCAAAGCTCTcgcaaatgttgaaaataacaAATATCAAACT
CAATTCGTGCATTTGAATATGTAGGTAAAAgaaagataaatgaaaaaagt
acaccgattatttctttcttttccatAGATAGCGTACAAAGAGGAAATAA
ACCGCCAAAAGGAGATGCATTTAGAAACCGTGTTAGAGGTAAGTTTCTTT
TAAACAGTGCTTATTTTCCTATTCATTGCCGAGTGATGAGAGGATCCAGT
TTAATAGAACCTCGACTTATCGCAACCCAAACGGGAGCCTTCCCCTACTA
GGAAAAATGAgcgttgaaaatttcattcatatggcaaaagtttttgaaaa
ctccCTATCTTTGTGACATTGGAGAACAATTTTATTGCAGCTTTGAGAAT
CCCTAATCATTTTCACCGGATTGCTTAGGCAGGGGTGTGAGCGTAGGAGG
AGCTAGCAAAATTCGCTAAAAACCTTTAACTAAAGAACATTATTCTGACA
AACTTTTTCCTTTCCTAGTGGAGATTTTGGATCAACATATCAAATCATAT
TTTGATTTCCTTTGTAGATTACATTTTGAAGAGAGCACTAAATTCGGTCA
AGTTTGACGGCCAATGTTCTAATGAGCTTAGTGAATGGGAATGTGCAATG
GAACTCGAACTCGCAGGTGGAGATTGCAACACAACAGAGTTTCCTTTCGA
AGCAAAATGTCGAAAATATTGTGAATTTTGTTGataatatttttagtcaa
agaCTTTATAAAATATATTCCCATtgagtcaaaatatttttactttgaat
CTTCGTGTTATTTTACCTGAATTATCTTGAAAACAACGCAATGACAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016458-exon-sc0000240-1491911889:60021..60249 | TCONS_00016458-exon-sc0000240-1491911889:60021..60249 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1510915933:60021..60249 | TCONS_00016458-exon-sc0000240-1510915933:60021..60249 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1575043694:60021..60249 | TCONS_00016458-exon-sc0000240-1575043694:60021..60249 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1491911889:60449..60508 | TCONS_00016458-exon-sc0000240-1491911889:60449..60508 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1510915933:60449..60508 | TCONS_00016458-exon-sc0000240-1510915933:60449..60508 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1575043694:60449..60508 | TCONS_00016458-exon-sc0000240-1575043694:60449..60508 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1491911889:60888..61168 | TCONS_00016458-exon-sc0000240-1491911889:60888..61168 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1510915933:60888..61168 | TCONS_00016458-exon-sc0000240-1510915933:60888..61168 | Clytia hemisphaerica | exon |
| TCONS_00016458-exon-sc0000240-1575043694:60888..61168 | TCONS_00016458-exon-sc0000240-1575043694:60888..61168 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240 | supercontig | sc0000240:60021..61168 + |
Blast
The following BLAST results are available for this feature:
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