TCONS_00016477 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00016477
Unique Name	TCONS_00016477
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1668

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000240:227203..240636+

transcript sequence

>TCONS_00016477 ID=TCONS_00016477|Name=TCONS_00016477|organism=Clytia hemisphaerica|type=transcript|length=1668bp
AGACTTCAACACACAAATTAAAGAAGGCTATGAAGACTTTGCAAACTGCT
GCTCAAGGAAATGTTCAAAATGAGGTGACATATGCAGAAAGTATGGAAAA
GCTAGGGTCTGTTGCACTCTCCAGAGAAGCTGAAACTGGCATTGGTAGGT
ATCAAACCACTTATTGTGTGCTTAAGATANGCTAGGGTCTGTTGCACTCT
CCAGAGAAGCTGAAACTGGCATTGGAACTGCATTTCTGAAGCTCTCAGTA
ATTACAAAGGAGCTGGCCAACCATAGGAAAATCTTGtgtgaaaatttcaa
taacatGGTGCTGTTCCCAATCAACTCATTGCTGAAAGGAGATATGAATA
AAATTGGGGATATGAAAAGGCCGGTGGATGATGCTTGGAAAGAATACAAA
TCTAAAGGTATAAAGAAAGAGCAGCGCAAAAAGACATCAGAAATCATTCT
TTATCGCATTGACCAACCTGAGcaaactgCAGAAGGGTCAGAACGTGAAA
GAAGAACATTTATGTACCATACTAGTGAGTATTTGAGTAAAGCGAACGAC
ATCAAAATGAAGAAAGGTGTGGAGCTGGTTCAACATCTTATCGAACACTA
TCATGCACAACTAAGGTATTTCAACAGCGGTATCAAGCTATTAGAAGGAA
TGAGAAGTTATTTCGAAGGGCTAGCAGACGAACTACAAAAGaggaaATTG
GAGAAAGAGGAGGAAAAGAAGGAGCTTAGTGACATAAAGTCCAATCTAAA
AACTATTCTTCAGTTGGACTCAAAAGAGGTTGATAAAAGCAGTGGACGTC
AGAACTACAAGATTCATGGCCAACAAGGAGATAAAGTTTTCGGTGGTTCC
AAATCAGGACATCTTCACAAACGATCTGAAGGTGTACGGAAACAATGGCA
GAAGCGGTATTGCGTCATCAGCAATGGTCTATTCACACTGGCACATAATC
AGcaAAGTGCACCGACGGCAACACTACCACTGCTCACCTGCCAAGTCAAG
CCAATGGCTGAAAAGGACAAAAAGCTACAATTCGCTTTGGTAGCACACAA
CAGAACGTATTTGTTCCAAGCTGAAGATGAAGCAGATTATGAAGCTTGGA
TTTCAGTATTGAGCAACGCGAGGGAAGAAGCACTAAATAAAGCTTTCGGT
GAAGGCGAAGACGCGCTGTCCAAAGAACCAGTGAGCAGTATACAAGAGTT
AACGCAAGGTATCATATCGGAGGTGCGAAGGCTGCCGGGAAATAATCAAT
GTATCGACTGTAACGCTTATGATCCGACCTGGTTATCAACGAATCTTGGT
GTGGTAGTATGTATCGAATGTTCTGGTATTCATCGTGAGTTAGGTGTTCA
TGTCTCAAGAATTCGATCCTTGACGCTGGACAGACTGGGAACGGCTGAAC
TACTGCTGGCGCGAGCAGTAGGGAACAGTGACTTCAACGAAATTATGGAA
GCTAGCCTGGATCCTTCTCTCAAACCTACTGCTGGCAGTAATATGGATCA
ACGAAAAGAGTTTATCACGCAGAAGTATGTTCAGAAAGCCTTCATCAATC
CATCTGGCCACCAGCCCAACATTCTCATCGAGAGGCTACGAAAGAAATGG
ATGGTTGGAAAGTATCTCAAAATATCTCGAGTACTTCTATGAAAAAGAAC
TTTTAGCAAGATGGTGAT

Run BLAST on NCBI

transcript from alignment at sc0000240:227203..240636+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00016477 ID=TCONS_00016477|Name=TCONS_00016477|organism=Clytia hemisphaerica|type=transcript|length=13434bp|location=Sequence derived from alignment at sc0000240:227203..240636+ (Clytia hemisphaerica)
AGACTTCAACACACAAATTAAAGAAGGCTATGAAGACTTTGCAAACTGCT
GCTCAAGGTTAGTTCAACTATTTTACTCAGTTTGGCAGTTGTACTGTTCT
GTAGCACCATGTCTCAAGATTTGTGACATAATTTTAAGGTGGTAGTcata
tggatttttgagaaaaattctcaaaattatcaaaattgagattttttgat
ATTTAAGAGCAGATGCAGCTAAGAATCAGAAGAGCTCAATATAAAGTGGG
ATCATGGGGGTCTTCAAATCTTCCTGAAATTTTGACACAAGGTCACATAT
CTTGGGTGGATcacacacaaaaaaattcaGCTCTCTAGCAACAACGGTTG
GTAAGTTATGCCCAATTTACGAaaatgtaatttacagaccagtaaTTTAC
TTACCAGAATTTAAAACTTTAATAACTAGGCCAATTTTGATCCGattaag
ctgaaattttgcacactggtAGATTTTGGTACTATCTTtcagtttttaat
gaaaaattttttttcgggtcAACAGGAATTccaccattttgatttttcaa
ttttccaaaaaatctttACCGGATGATTCTACTGTAGGCttgatttccca
aaaaaggggTCTTCAAATTTTCCACTTTTGTACCTTTTCGGAAAGCTGTA
CTTTCTGGATATAAAGAGATATTTATATAAATGgagatattttgtcaaat
tgaGAAAATGACCGCCCAAGTTCAGTTTTTCACTGATTTTAATTTTCCCT
CGTTTCCAGGCCCCCATATTTCAGAGTGAGAAGTCCCCCTAAAGCCCCTT
CTGGGTGAGAAAGAAGTGTCTGTAAGTTGCACCTTTTGGTTCATAGCTGA
TGTACTACATACATAATAACACAATATACCGAAAGAAACTTTCTCAGATA
GCTATACTTAAAGCAAAACCAAGCTAAAGTTTGAGAAATAACAGTAGATT
ACGACCTTTTACCAGATTACCAGATTTTAATGGTCTAAGTAGGGTTTTGG
TGTCCCTCtatattgattttgaattttacagTTCAATATGGTACTTTTTC
ATAAACGCAAGAAGCAGCTCAATGCTGACCTGacggaaattttaaatttt
ccggttTCCGCCCTTTCCGCCCTTTCTTTTCACACCCTAGTTTCGGGCGG
GATACAAATGCGTCAATACAAACACGGGCATATAAATTTTAAAGTGGGCG
TTGTAGTTATACGACTCTGCAAGAAACATCAAAtcatatcaaaatttcta
gttttttaatcaatttcttgataagatctCCAAAAATAAGTTACTTTTGA
CTTTAAAGCCGTTTTTCTCAAAACGCGCTCAAGGGGGTTTGCACATGCCT
TATCGGATATATCTCAggattgacaagtgctatggtcatgaaattttcag
gaaatgttCCTTATGTGATTTGGcagaggatataacaatttttcaaaaat
ctcatttcctcatttttaatctcaaaaaatcGTCTTTTTAGGTTCCAGAT
CCCCTGGTGAgagatttttaaaaacaattccATATATCCTCTAGCTTTCT
TAATTACAAACCTGTATGCCAAATTTTATTTGTCAATTATTTCTGGATCT
TAAGAAAAATATGATACCATATTTTTACCATACCTTACCCCCTGGACCGT
AAAACCCCCGTCtttgatattaaaaaaaaaattatatttttatttcttaa
taGTTTTGAAGTGAAATAATAAAAACTTCTCAAGTTATtgcaaaaagtgt
aaaaaaataaCATCCTCAAAAATCCATATGACTACCACCTTAAGGGTgca
ataaaaaatgttattcgAAATAATAAAGTATTTTAAGACATTTTGACTGA
TATCGGCTGCCTAGCAGACGTTAAATTCTAATTTGAAATCTTCAGAAAGA
GCTTGAAATAGTGAGCAAAACATAAACTGCTGCATCAAGTCCTATATTCA
AACGCACAAAGAATTTTCTTGGCTTTTTTTAATGTTATTTAAAGTTGAAG
TACATAGAAGTTCTTAAAATCTTGAATTTACTTGATTATCTAGTAAGTTA
TGTGGTTTAACTTTGTTACAGGAAATGTTCAAAATGAGGTGACATATGCA
GAAAGTATGGAAAAGCTAGGGTCTGTTGCACTCTCCAGAGAAGCTGAAAC
TGGCATTGGTAGGTATCAAACCACTTATTGTGTGCTTAAGATANGCTAGG
GTCTGTTGCACTCTCCAGAGAAGCTGAAACTGGCATTGGTAGGTATCAAA
CCACTTATTATTATGTGCTTAAGATAATTATTGGCGTGGTCTACCACAAT
CTGTTTTCAAAGGATGCATAATATTCTATTATGATTGCTAACTCATcctt
tgaaacaaaagaaaatctcaattcaacttcagttgagctagaagtTGACA
ATGTGTGTCAGTGTGttgcaaaaactttagggcagcctggagaccaaaaa
tggttggatttggctgaaatttgttccttgggtaaatatctagaggtgtt
ttttcttttcaaagattttgatttttggggcctcggGACTAGTTATTATT
TGAGCATCTCGTCttcagaatttgaaagatctttatCTAGTTAAAATTAT
ATCAAATAAGCAGCTAGCTAGCCTAAAACGGTCAAACATGGCATCTGTTA
CAAACCTTCAAActtaattttctcaaaactacaaaaatgaaCTTAGGATA
CTCTTATTCCGATGCAACGATTTATGTGATCTTTAATTTCTTTTAGCATC
AAGTTTGTTACTCACtgttaacttttttttcattatagGAACTGCATTTC
TGAAGCTCTCAGTAATTACAAAGGTAAAAAGCATTACTTATTTAAAATCT
GTCCCCAAAAAAAGCTGTCGCATGAACAAAATAAGGATGCAGACTTTTaa
agaatttgaattagatagaggttttgtactttttcaggagtggaatatta
taaaTGGTCTTAgaacatcatcactgtgaaaataattttcaaaaacttca
attcaatcaaaaatataACCCAAAGATTGTCGActttaaaatcttcaaag
aaCAACAAAAAAGTGTCCTTTTTCTAGTCTACCAGACAAAGgttattttt
tgactgaataaaatatcttttgaaaatgtGTGATGACGCTCTAAGATGGA
AGatttgtttgtttgaaaatagttcTCATCTTCATTCTTCAAAATTGTTC
CAGTTCTTTCTTTATGATAATACTACtcattatctttccaacaagcaCAG
AGTCGCTATCTAATTTGAATTCTATTGAAATTTAAAGCCTTTCATTAAAT
GCCACTTCAATTACTGTCCTCTCAACTCATATGGATGTTTCATAGCAGAG
CTCTAGAGGATGAAATCAACAATCTACATAAAAGATGCctgagaatcgtt
tactcagacTACAACTCATCATACGAAGATCTGTTGAACCATGATNTGAG
AATCGTTTACACAGACTACAACTCATCATACGAAGATCTGTTGAACCATG
ACAATGGTTCCACTTTTCATCAACGAGCAATTCAATCCTTATCCACAGag
ctatttaaatcaaaactcaatgaatcagaaaataaaatctttctcaaaaa
cCAATGTTCTCAAAACGAGAAAAAGGAATTCCTTTCGTCGTAGTAGAGTA
GTTGAAAGTGAAATAAATGGAAAATCGTCCTTAGCTTTCTTGCGACCTAA
AATCTGGGCTACCCTTCCCgattaatttaaaaattttaaaacctagatga
atttaaaaaataaatcaagcaATGGAGGCCAACTACTTGTCCTTTCCGAA
ACTGTCACACCTTTATCCATAGCGTTGGTTTTATcgattgaatttaaatt
aatttgtaaataataaTTGATCTTGAGTTTCAACCTTCTAGATAGATTTT
TGATTAAgagttgatattgattagcctcgagctaagtacacattgtacta
ctttacatcaactttaaagaaaagaaacataaacataaacatagcTGTAA
GGAAGTATAATATAAAAGAGGATTTATATTTACGATAATTATTGTATTCT
TTTAGAATTCGAACTGAGTACGGCCCGTTTCTATATCCCTAAATCGACAT
ATTATACTCAAGTAATGATGAAAAGGCAAAATAAAGTTCCAATTCGCATT
ATTAAAGTGGCTCATTTAATAAACGTAAagtaaattatttaataaacgcc
ccctctaataaacgcccctcctgaaaatcaaaaaatttaataaacgcacA
GGGCGTTTTTTCCAAGTAATACAGTTTATCGAGACAGACTTTTAAAAGCT
ATAATTGGAGTGAGAAGGTTCATTACGCAGAGAAGGCATGAAATCAGATA
AttgttcaaaataattgttaacaGAGCATGGTGTTGGCTCTCCTTCGCAA
AAGTTCTTTTTCAGTTTATAAAATCTAGACTATATATACCCTTTAATAAT
CACTTAAATTTTTCAGGAGCTGGCCAACCATAGGAAAATCTTGGTAAGTT
TTTTTACTTAAACAAAGTTATAAAACCCTATCTCATGGACATCATATCCC
CTTTTATCAGCGTCTTGAATAAAGAATGAGGTTGTATTAAGATTTCTTTG
GAGacacaattttatacacaaatgaatatttctgacatagtagctaaatt
tcttgggaattggATGACCACATGGTTAAGGACCCTTTTAGggtaatgtt
tttgaaaaatctttcactTTAAATTTagtgtgaaaatttcaataacatGG
TGCTGTTCCCAATCAACTCATTGCTGAAAGGAGATATGAATAAAATTGGG
GTAAGTATTCAGAATTTAATCATTCTATTTCAAGAGAAAACTGCTAATTT
CAGAGTAAAAAAGTAGAGGGGTAGCTAATTCTTTTTGTCAATGTAGCAGC
TTCAAGGTCTTACCCCTTGCCAGCACGATATACTACCTAGTAGCCAACAT
CATTACTCTCTCtggttttttttaaatgtggTTTTTAAAATCAAGCTGTT
AAGAGCTATGGCGGTCTCTATTTTGGCATTATGCTGAAACACTAATTTGA
GACTTGAAAGGTTTGTTTGTGATAATTCtgttaatcgcacgatgagttat
tttttcttttttggcgcgccttcaaagagagcaattaatcgttaattgca
tcatgTAGAGAGCAATTGATTGTTAACCCTTCGATGCGGCgccaattttt
acaaaattgattttattgttttttcttacattttttttcatcgaacgttt
taattgcattcgaaattcctTTTGAGAGAAAGATAATCAATAAGCAACAA
TTAAAGAAAAACatagagagaagagaaaaatatgaaattttcaatgtaat
ttactttcctaacggggaaaaaagtagtgaaacccattgtgcgattagtT
CGTAAatacataataactcgtacaattcgaaaattgcactcgtgattttt
tgtTTAGAATTTTTCTCGTCCTTTCaggtcctttcggactcggaaaatta
ataacaaaaaaatcactcgtgcaattattctcgaattgcactcgttatca
tgtgatgcgttagttaccagcttttctcgagattggctcatttgattttt
tgcataaaggtgcataactataaaccctcgaatgtgacaaaaccggaatt
ttcgaaaaaatatttttgggagcAAACTCCCACTTTGGATNGGctcattt
gattttttgcataaaggtgcataactataaaccctcgaatgtgacaaaac
cggaattttcgaaaaaatatttttgggagcAAATTCCCACTTTGGATCAT
AATTTTTCCTGACTTTTTGcttgaaagtagggtaccaacagcagattttc
actaaaaaactttttcgccTTAGAAATTGAATCTTTTTCGCCTTAGAaat
tgaatcttttttttttattgaatatttttacAGGATAACGCAGACAGTTA
TACAAAAAAATGATATTACTAACTATGTTGGTCCTGActtaaaataaaca
ataaatttataaaaTGATTTATATAAGTGtcctttaaaataaaataatta
aaataattgaCTGCTTGATATTATGAGATGAAGATGGCAAAAACTGACTA
TAAAATATTGTTTGCAAATACTTGGTTCTCTGCGTTATACGAAAATCTCA
GGTAGATTTATAGAAAAATCGCTAAGATTAGAGACGATTAAGACCAATGA
TGATGACTAGAAATGGATATGaaatataatatttgaaaattattaagTGT
AAAACCGAAAACAAATGACAGAAAAGATACCGATACtatcactcgttccg
gattttccgtatattttcctcgcctaaaggctcggaaaatattgtacgga
aaaatctcgaaactcgtaaaatatttctcatattgtactcgcaactgtcc
gataactattacatatcaTGAGCTTCACACTTTTggattattttcttatt
ttcttttacgcatatactttatgagaataaaatcaatcaataactATTGA
TAGAGGGCTGTAGAGGGTAATATACCCTTaggttattagttcttacaaag
taaacacgGGCTGGCGCAAAATATgagtatatttattttctttaaagcaT
CTGCTTTATAacaattaaatcaataactcttgatggCGGGTAATATACCC
TtcagttattagttcttacaaagtaaaaaagGGATGGGCACAATATCCAC
TTTATAAAAATCCCATGCTACAACCCATGCCGCGAGTTGAATAACACGAA
AATAAATTACTAAGGTGATATTTTTGAGTTGAGAAGTTCGACCAATAAAG
CTATAATTATACTCGATTATCTTTCTCAAACCTTTAAACAACTTTTTTGT
CATCTAATTTTCGCATATTTACGCATATTATTCTCCtcctttccaaaaaa
aggcaagtTTGAGTCATAATTTACACTTCTAAAATGGATAATTTATTTAA
GAGAGGGACCTTCCTTCGGGAGAGTTGCAGAACATTTTATAAAACATTAC
CTGTTTCTGTTGAAAAATGATGGTTCTTCTAGTTGGTATTAAgtggaaaa
aagtaaaaatcagaGGATAAAATTTGACGAAAGATAACGAAAGACTTGTT
AACAAATACCTAAAACATATTTTCATCTGAAATTTGTCATGTTAACAGTT
TGATTGAAAAACGAGAAATGAAGTGTTTCATGTTGATGCGacgatttttt
gaattttagaagtatgtttctttgtttacatttttctatcTTCCTGTTTC
TGTTTTgaagtagactggagtcgtttataatgcgtgtaatactaataata
ccaatactaataatgataataatacgggatttagtttgtataaacgactg
gaagaatccggtgttccagccttaaagataccccggctagctacgcagaa
acttgcgtagagagaaaacaatttatcaagcaacaacaaactctcaaaac
gaaatcaactcaaatgaaaaactttNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNgttagtgcacaaaggtttctagacgacta
aaattgttccattcattactttttgctttatttctactatgtataaatta
gtcgtctagcttgctagactagtttTGAAGAAATCAAACCTTCCTAAACC
GGCAGATCTTCCCGTTCGACTAGTCTATCCTGAATAAATTACTCTTAACA
GATAGTTACATACCATCGTGCAGATTAAACACGAGCGTTGgatatatttt
ttccttttgatgCAACCAAAAAAATCTACCGAAATTTGGTAAATGAGTCC
CTGACTCGAGTCGCATCCATGAAGATCTTATTGAATTTGTATATGGATTG
CATTTATTGAAAGTGAAATAAAGTAAATATCTATAGGCTGTGTTAATCAA
TATATCCCTTACTTAATTTATGACCAAAAACTCTCAATCTTTTCTTTGTA
GTAGTAGATTTTGAGTTAGCTTCCATCTCAACTACTTGTTTTTCCCATGC
ACTCTAAATATTAGGCGtcttgtttatgtttctttttaatGTAAAGCTCT
ATGAACTTCTTTCTGTTTGTAGGATATGAAAAGGCCGGTGGATGATGCTT
GGAAAGAATACAAATCTAAAGGGTAAGCAGACAATTGTctgttcattttc
aaaaatatcacgCAAAAACGACTTTCTGAAAAAGTTTATATATAAGATAA
CTTGACTGCAGTGTGATGTTTCAATAATGAACCCTAAATGAGATATTTAT
GCTATTTTCACTTTAGTATAAAGAAAGAGCAGCGCAAAAAGACATCAGAA
ATCATTCTTTATCGCATTGACCAACCTGAGGTAAAACTAATATTCTCACT
TGCTGGaaatgaaaactttaaaaatttagctcatttttagatttttgacg
atgttgatgaaatttaaaaaagtgcaATTTTGAAAGCATTTTCTTCTACA
ATTACTAGTCTTCTGTTGTGATTGGCCAGCAGAAAGTAGTTACTCCTTCT
gtttcttttttaagcaaactgCAGAAGGGTCAGAACGTGAAAGAAGAACA
TTTATGTACCATACTAGTGAGGTTAGTTCATCCGATTACAGTAGTTAAAC
AAATCAATACTACAGGTCGTAATTTTTTGAACACTTTTTATCATTCTTCA
GTTTATCCACTTTATTTGCAATCCAGTAATAGATAAAGTTTTCAATTTAA
CCCAAAAAATAATCTTTGATCTACTAACAACAGCATTTTGCAGGTATATC
ActcataaaattatattatggTTCATGAAAAGGAGGctgtctttgtttta
ttgtgTTGCTTTTTGTATATTGCTTCAAAATCTACTCGCTTATATaagtt
tgttgtttgtgttgTTGTTTGTTTATGTTGTGTTGCTCCCAAGGATAAAC
CAAAAGGAGCGTTGTTCATTATCATAAGTTCACAATATTTAAATTATAAT
ATTCTTCTTCCCAGTATTTGAGTAAAGCGAACGACATCAAAATGAAGAAA
GGTGTGGAGCTGGTTCAACATCTTATCGAACACTATCATGCACAACTAAG
GTATGATTGCAGTAATGAATCACCCTTCCTATTCTCTATTCTCTTTGACA
ATGTAGTGCTCACATTTTTAAAGATGTTAGCCTTAGCAGCCTGggataaa
gattttttcctaaTTAAGGCaaaatatcttttgaattttattgcaaaaga
attcaaattgATTTCATGTGATATAGATCTAGTAGCAAGTAGCACAAACA
TATTATTTGGTCATTAAAGCCAACCTCATCAGATGTCAAAAGGGTTTTGG
GTGCCAGCTGCATCATCCCATTTGCCCCTCATAATCTCCATAGGTATTTC
AACAGCGGTATCAAGCTATTAGAAGGAATGAGAAGTTATTTCGAAGGGCT
AGCAGACGAACTACAAAAGGTAACAATAAGTTCATGTTATATTTTGTGTC
CGTGTTATTGATGAATGAGAGATCATCTACTTTCCTATTTTAGTTAATCA
GTAATCTTTTATTCATTTCAATATGACCCAAAAAGCAAAGGTGTGGGTTA
GCCCTGTCTTATGCCTACGTAAAGGAAATTGTTTTTCTAACAAACAAAGC
TAACATTTTTCATGTCTCAATCAAttgtaatcaatttttttttcagagga
aATTGGAGAAAGAGGAGGAAAAGAAGGAGCTTAGTGACATAAAGTCCAAT
CTAAAAACTATTCTTCAGTTGGACTCAAAAGAGGTAAATTCTTTAATCCT
TGTCATAGACGAGAAATCTTTTTTGCGTATCTAATTTAAGAGATTTGATA
TTAATGTGGGATTTCGAAACAATAAAGCCAATTAAGTGTTTAAAGGATAT
TGTGTCAATTTCTATATTTGTGTTGGAGCTTTAGATTAgtacattttgat
tttaaacaaATGATTCACCTTATGAAAACTGATGTCATTTGTTACTAACA
CAGTTCAACAAACgtgttgagttttcaaattccTTCCTTGTTCCATACAA
GACACGTTTGTTCCAAAACATTGGACACAATTCTTAAAGAAAGTTCAGTC
AAGGATATAATGATAGATGAGGACGATGGTGGGTACACCAGCATTGACGC
GTAGAATCGATGCTTTGTATTTGGGTGAGCACTCTCACAAAATGGTAACG
GTAGCTATGAACAGTCCTCGCTATCAACGTCGCTTATTGACAGTAAGTAG
TTGACGTGCACCATACAAACCTTCGCAGACAACTTTGTGTCATAACTGTC
ATAAGAATTCAAcgtaattttttgttcattacAGGTTGATAAAAGCAGTG
GACGTCAGAACTACAAGATTCATGGCCAACAAGGAGATAAAGTTTTCGGT
GGTTCCAAATCAGGACATCTTCACAAACGATCTGAAGGGTAATTTTCTGC
TGTCTATTTATCTCCTCTCTCTCAATTTATCCTTTCAAATTCtataattt
aaataaaataagGTTGCATTTCAGAAGAAGTGcttattttgatttctttc
tttttcatttcattcagTGTACGGAAACAATGGCAGAAGCGGTATTGCGT
CATCAGCAATGGTCTATTCACACTGGCACATAATCAGGTTCGTATGATAG
TTCTTCTGATGGAAAGTTAACATTTTATACCCTTTCTCATATCAGTCTTT
TCTGACGTGAAAGGAAACTAACGTCAtgagttttgttgtttttttcagca
AAGTGCACCGACGGCAACACTACCACTGCTCACCTGCCAAGTCAAGGTAA
AAGTAACTCCAATTGTCGTGGgtcaagttaaaaaaaagttgaactaatTC
AATCAACTTCAAAATATCttctttaaaaacataaaagtaATTACTTACTG
TATATTTCAATGCGTACAAGACAAAACTCTCTTTTCAATTTGATTGGCCG
ATCCAAAAACATTGATTCTCAatacttatttttttcacttcgtTTAGCCA
ATGGCTGAAAAGGACAAAAAGCTACAATTCGCTTTGGTAGCACGTAAGTA
TAATTGTATTTTCAAGAAATGATCAACTACGAATCTCGTACAAACCAGGT
GTTAACATTAAGAGACAGCATATAAAAAAACTGATATGAACTGACCATGT
GTTACCAACCATCCGTAACGTCCAGTTTACATTCTTCAATATGAGTGAGC
AATGCTTTTGTCAGCCAATCCCGAAGAATGAATGAATCTTGAGGCCGTGT
GATTATCTGTGCATTTGATGTTAAATCACGAATGATTAGAAGAAAGTCAG
GTGTAAAACGTACTTCTCAACAATCTTTTTTTACAGACAACAGAACGTAT
TTGTTCCAAGCTGAAGATGAAGCAGATTATGAAGCGTTAGTAAACATTTC
ACCTGCCATTTTCCTATGTACCATCACATCCTAATGAAAGGGATCACATG
CATTCGTATAGGAAGAAATCTCAGCCAGTTATGCTGAATAGTTTTTATAT
GATTTCTTAAGATTTCAATGTGTATTTCACGTAtttcatgtttaaaaaaa
attatttggaacTGTTTTCTTTTAGTTGGATTTCAGTATTGAGCAACGCG
AGGGAAGAAGCACTAAATAAAGCTTTCGGTGAAGGCGAAGACGCGCTGGT
AAGTTCATATATCGCTTTAATATTATCCTCCTACACCCAGCTTCTTCCTT
ACTTTAATACATTTCTCTTTGAAACCGTAATGTACTCCAATCTCTTCTCC
NTCCTCCTACACCCAGCTTCTTCTTTACTTTTACATTTCTCTTTGAAACC
GTAATGTACTCCGATCTCTTCTCCTTTTTTTCCAGTCCAAAGAACCAGTG
AGCAGTATACAAGAGTTAACGCAAGGTATCATATCGGAGGTGCGAAGGCT
GCCGGGAAATAATCAATGTATCGACTGTAACGCTTATGGTAAGACTTCCA
TTTGAAAGTTTGataaaataattctttatcTACGTCCATTTAGATATTGT
ACACTCATAAATCAAGAAAGTGTTTGAAAAGCGAAAGGAGTTTACCCCAA
CAAAGCTGTTGTTTTCATATTCTAGATCCGACCTGGTTATCAACGAATCT
TGGTGTGGTAGTATGTATCGAATGTTCTGGTATTCATCGTGAGTTAGGTG
TTCATGTCTCAAGAATTCGATCCTTGACGCTGGACAGACTGGGAACGGCT
GAACTACTGGTACTTGTTGTAATCTTTGGTTTTATAATAACGCGTCTGCT
CCTCTTCCTCTTTTTATGTGAAATAGTATTTGGCGATGTGTTAATGATAC
CCTTACCGTCTGCCCCTACCAGTTTGGTTACTATTAAAGTGAATTCCTAC
TTATCCAGGATTTAATTTAAACGAATATCTTTGGAAGGCTTTTTGGTAAA
ATAGTATTTGGCGATGTATTAATGATATCTTTACCCATGTCCTCAAGTCA
GACCGTTCAagaccctcgaaagtctctcttTAGGTTCGCAAAAAGAAAGA
CGAGTCAAATAATTTAGTCTCTTCAATAACTTCCAAATTAAGTTGAAGTT
TCGGTCGTGCGCCCGGTCTGTGCCCAAGCCTGTCATTGAACCTGTTGGTA
TTTACTTTTGTTTCTGGTTATAGTTAAAgtcaaaacaaaggaaaagcTGA
GGGTGATGAACTAGGCTCGATAATGTAAAAGACTTTCATTTTTTAGCTGG
CGCGAGCAGTAGGGAACAGTGACTTCAACGAAATTATGGAAGCTAGCCTG
GATCCTTCTCTCAAACCTACTGCTGGCAGTAATATGTAAGTAATTTAAGT
CAGAATCAAATACCCCAAATAGCATATTGAAATACTTTAAAATAGGACAT
CTAATAGTGGTCTACACAACTTTCCACTTGTCAGTTTTTGTTTTATGCAT
GGTTCGAGTGAATTGTCTAATCTCAATCAACCACCATTGTTTTTCAAGGG
ATCAACGAAAAGAGTTTATCACGCAGAAGTATGTTCAGAAAGCCTTCATC
AATCCATCTGGCCACCAGCCCAACATTCTCATCGAGGTTTGCTTCTGTTT
TTCAGTTTAATGTCCTTTCTCTTTGCGCGTTTCTTAGCGTTTCTTGCATG
CTTTGGTAAATCAAGTATTTCCCCAGTAGATAAAAATCAATCTAATGAGC
CATTTAAAAATGCAGTTATTTAAAAGTTTGGCATTTCTTTCCGGACAGAG
GCTACGAAAGAAATGGATGGTTGGAAAGTATCTCAAAATATCTCGAGTAC
TTCTATGAAAAAGAACTTTTAGCAAGATGGTGAT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_009202	XLOC_009202	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000240	supercontig	sc0000240:227203..240636 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.958417	0.357253	10.4852	7.55435	6.74959	8.04108	1.84762	2.64112	0.896084	1.7294	4.64464	4.69353	0.708102	1.75525	3.87772	2.65687	2.13637	7.0556	0.901982	0.508995	0	0.0119204	1.78791	2.40889	0.685149	0	1.37685	2.04749

Blast

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BLAST of TCONS_00016477 vs. Swiss-Prot (Human)
Match: ASAP1 (Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=ASAP1 PE=1 SV=4)

HSP 1 Score: 412.535 bits (1059), Expect = 1.318e-130
Identity = 234/461 (50.76%), Postives = 324/461 (70.28%), Query Frame = 2

Query:  176 DXLGSVALSREAETGIGTAFLKLSVITKELANHRKILCENFNNMVLFPINSLLKGDMNKI-GDMKRPVDDAWKEYKSK--GIKKEQRKKTSEIILYRID-QPEQTAEGSERERRTFMYHTSEYLSKANDIKMKKGVELVQHLIEHYHAQLRYFNSGIKLLEGMRSYFEGLADXXXXXXXXXXXXXXXXSDIKSNLKTILQLDSKEVDKSSGRQNYKIHGQQGDKVFGGSKSGHLHKRSEGVRKQWQKRYCVISNGLFTLAHNQQSAPTATLPLLTCQVKPMAEKDKKLQFALVAHNRTYLFQAEDEADYEAWISVLSNAREEALNKAFGEGEDALSKEPVSSIQELTQGIISEVRRLPGNNQCIDCNAYDPTWLSTNLGVVVCIECSGIHRELGVHVSRIRSLTLDRLGTAELLLARAVGNSDFNEIMEASL-DPSLKPTAGSNMDQRKEFITQKYVQKAF 1543
            D  GS  LSR+    +GTAF+K S +TKEL+   K L +  ++ V+F ++SLLKGD+  + GD+K+P D AWK+Y++K   I+KE+R+   +  + R +    + AE  E+ERR F     EYL K N+IK KKGV+L+Q+LI++YHAQ  +F  G+K  + ++ Y E LA +L   K  ++EEKK+L+ ++  +K+ LQLD KE D  S +  Y +H  QG+K +G  K G+L K+S+G+RK WQ+R C + NG+ T++H   +   A L LLTCQVKP AE DKK  F L++HNRTY FQAEDE DY AWISVL+N++EEAL  AF  GE +  +   +S+++LT+ II +V+RLPGN+ C DC + +PTWLSTNLG++ CIECSGIHRE+GVH+SRI+SL LD+LGT+ELLLA+ VGN+ FN+IMEA+L  PS KPT  S+M  RKE+IT KYV   F
Sbjct:  100 DKFGSNFLSRD-NPDLGTAFVKFSTLTKELSTLLKNLLQGLSHNVIFTLDSLLKGDLKGVKGDLKKPFDKAWKDYETKFTKIEKEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKE-DSQSRQGGYSMHQLQGNKEYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNRQPAKLNLLTCQVKPNAE-DKK-SFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAF-RGEQSAGE---NSLEDLTKAIIEDVQRLPGNDICCDCGSSEPTWLSTNLGILTCIECSGIHREMGVHISRIQSLELDKLGTSELLLAKNVGNNSFNDIMEANLPSPSPKPTPSSDMTVRKEYITAKYVDHRF 552

The following BLAST results are available for this feature:

BLAST of TCONS_00016477 vs. Swiss-Prot (Human)

BLAST of TCONS_00016477 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ASAP1	1.318e-130	50.76	Arf-GAP with SH3 domain, ANK repeat and PH domain-...	[more]

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TCONS_00016477 (transcript) - C. hemisphaerica