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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016490 ID=TCONS_00016490|Name=TCONS_00016490|organism=Clytia hemisphaerica|type=transcript|length=1026bp
ATCCAAAGACCAAACATCCAGCATCTGGCTTTAAGAGCTTTCAACACGTT
GTActaagaaaacaaaagttaaaatgaGTATAGCACTTGGCAGATTGGCT
GAAGAGCGAAAGGCATGGCGTAAAGATCATCCATTTGGTTTTGTTGCAAA
ACCTGTTAAAAATACTgatggaactttgaatttgaccAATTGGGAATGCA
CAATACCTGGTAAAAAAGGGACCATTTGGGAAGGAGGCTCTTACACTCTA
CGAATGTTATTCAAAGATGACTATCCTTCTTCGCCACCAAAGTGCAAGTT
TGAGCCGCCACTATTTCACCCCAATGTATATCCGTCGGGCACTGTGTGTT
TGTCACTCTTAGATGAAGATAAAGACTGGAGGCCTGCTATaacaatcaaa
caaatcttACTCGGCATTCAAGATTTATTAATAGCGCCCAATATCCGGGA
TCCTGCACAAGCTGAAGCTTACACGATATATTGTCAAGACAAAGCAGAAT
ATGAAAAGCGAGTGAAAGCCCAAGCTAAGAAGTTTGGTGCCAAGTGAGAC
ATGCTTTCGGTTCTTCTTCAGTTTTTAGCTAAAATTGTGATGTTTGTGCA
TGGAGCACAATTTAACAACATCCCATTAAAAAGAACTTGTAAATAAAATC
AATATCTTCTCATAAATCTAATTACTAGCATGTCTGGTATGTACCTGTCT
GAAAAGTGGGAGATTCATCACATTCACCCTTTtgcttatttcttttattt
aatttaaaattgtttaaaaattcgTGGAATGGTAGAAATTTCAATTGGTT
CACTTTATGAAATTAGGTCTATCTTGCAGATCATTTTGTAGATTTTAACC
ATATTTTTCATTCATCTATTACTTCTTAAACTGTTTCTCTGGGACAAATT
ATGGGTGGTTCTTAAAAGTgtttgttggaaagataatcaaaatcatattt
tcttGTTGAACTATAATCCTTTGAAATTTGTAGCATAGTGCCTTCTATAT
TGTCATGGTAGTGATGAATAAGTTCT Run BLAST on NCBI protein sequence of TCONS_00016490-protein >TCONS_00016490-protein ID=TCONS_00016490-protein|Name=TCONS_00016490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
MSIALGRLAEERKAWRKDHPFGFVAKPVKNTDGTLNLTNWECTIPGKKGT
IWEGGSYTLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEDK
DWRPAITIKQILLGIQDLLIAPNIRDPAQAEAYTIYCQDKAEYEKRVKAQ
AKKFGAK Run BLAST on NCBI transcript from alignment at sc0000240:130730..144895- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016490 ID=TCONS_00016490|Name=TCONS_00016490|organism=Clytia hemisphaerica|type=transcript|length=14166bp|location=Sequence derived from alignment at sc0000240:130730..144895- (Clytia hemisphaerica)
ATCCAAAGACCAAACATCCAGCATCTGGCTTTAAGAGCTTTCAACACGTT
GGTAAGTATCTAATGTCTCAATCCTAGGAGTGCCAGGAACTATAGTTAAG
TATCTTATGGTAGCTACATGTTTTATACTGGTCAGGGCTATCCCTATCGG
TTTGCTGCCAGAAGATGGGGATTTTGGATTTATGTATGTCTGGTGGTGTA
GCTTATGTTATGCTATGCTATAATAGACAGGAACCCGTCTGCGTATTTTT
TTTAAATCTGATGAATACTTGACGGGTCAGAGCTGTGAGTCCGATTTCGG
CCTCAAAAAATTTACAGTGGGCCAGACATCCCCCCGCGCTCGATAGGATT
GATCATCGGAACGGCTCGATGGCGGATCGATATGTGATCAATGGATTACT
TAACGATCTGGATAGGAGATCGATAGAGGATCGATACTCAAGATTTCTTT
AAGCTTATGATTAGTTATCGATTATTTATCGATCTATCATCGATCTTTCA
TCGATCTTATCGACCCTCCTATTGACTCATACTCGATTTACGATCGATAA
CAAATCGATTAACGATCGATGACGAATCGCTTAACGATGGATGACGAATC
AATTAACGATCGATGACAAATCGATTAACGATCGATGACGAATCAATATA
CTCGGTTGAAAAACTAGCTCGATAATGGATCAACGAAGGATCGATACCCA
AGACTTTTTAATGGCTGAATCTTCCATCGATCTCCTATCCGGATTGTTAA
GTAATCCATCAGTTACATCAATATGCCTTCTTGTCTGTCTTTAAAAATAT
AAATAAAAGTAATCACGGAAAAGGACGCGAAAAAAAAAAGACATAAGTGT
GAGAACAGAGTAATCAAACTCGTTAGAAAAAGTACCANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAATGGTCAAGTTGAAACGAACGATA
AATGTATCAAGGTCTGTTTTATTTACCCCCTGGTGACTTAACAAAAGAGA
CTTAACTCGATGTTACGATCCAATTATTGAAAGTTTGTCTCGTCCTTTTT
ATAATGAGCGAGACATACGTTCTCTGATTACGCAATTTTCATATTGACAT
TTCTGAGGCATTTTGATGTAACTGTCCATCGATCACATATCGATCCGTCA
TCAAGCCGTCCCGATGATCGATCCTATCGAGCGCGGACGTCTGGAGTGGG
AAATTTGATTTAGCGCTCTGTCGTCCTCGCTTACTAAAATAAAAACCAAA
TTTCGGAACTTGCGCTTTCTTTAAGAAAGTGTGCCCAGTGAAACAATAAC
AGGATTTGATTGGCTGTGTTTGCCCGCCATGTGAAACTTTTCCAGATGGA
ATTGAAAAAAAAAAGCTGAAACACCAGCACGAATACTGACGAAGGACGAA
GTCTGGAAGTTTGTTTTGGTTGAACTTGAAGTCATTCCTTGTTAAGTACT
TTGTGTTTTACTTCAAATTTGGTTTGTGAACTTTCTGTTTTTTTTCTGTT
GTTTTTTCCTATCGCTAGATTTCACAAAATGTAGTCCTCCAAAACAAAAG
AATCACTAGATACAATCTGTCGTCATGATTCCGGTGCGTTCTATGCGGGT
TTTGGAAAATAAGTAGCTTCAATTTCTCTTGCCTGAGAAGGGTTAAAGAT
TCACCTCTAGCCCTTCGGGATTGAAACTCAACGGTCATCACGCCCAATCG
CGCTGCCTTTTTAGAGCCGAATGGATGATCGGCAATGATGTAGTAAAGCC
CGTCCAAAAGGCTAGCTAGACGGCATGCTTTTGCTGAAAAGTGTGTCGAA
TAAGTCACGTGACATTATAATAGAATAGACCTTTTTTCAAAGAGGACGTC
TTGTTGAATAATTATGTAGTCCAGCCATAAGAACAATGATAGAGCCATGC
ATAATTACTGTATCATGCATATTGTACCGTAGAGTCGTCTAATCTCGACA
TACGTCTTGCAATCTCGACATAGCTGTAGGCTGGTCTTCGAAATAAAAAA
TCAAACATAAACAAATACATACCAAAGTTATCAATCAATCACTAAAATGT
ACTCTCTCTCTATCACGTCACAGATTGTTGATATAATACCTTAAGGGAAG
AAATTTTCGCGGGAATTTAACTACGCGGTTGGTCAAATTATTTTTTTTCG
CAGGAATTTAATTTCGCGGTTGCAGGATATTTTTGGCCAAAAGCGTTATT
AAATAAGCAAAAAACCTGTTTTAAGGCTTGAAATAGTACGAATTCGGGGA
ATGCATGAAATTAATTAAATTTCGCGGGAATTTAATTTTGCGGATTGACG
ATTTTGTAAAATTTCGCGGGAACTTAATTTCGCGGTTTTAGGCAAAATCC
GCGAAAACCGCAAAATTTTGTTCCCGGGAAAATTTCTTAAGGTATGAGAA
ATGTGAAGTGTTATTACTTATATTTGAAAAGAAAACTTTAACGATGTAGT
AATCGCTAAAAACTAATTAGCATACTTTCAACTGTCAACGAAGATGTCCA
AATCACAACAACGCAACATTTGCACGCGAGGAATTTTTTAGTAGACATTT
ATTTTTACCGTGAACCGAAAATAATAAAAAGAACCCGGTTTCCTTTTGAA
TTTAATGTGACCGCCATACTGGCAATCACGGCGTGCGGCCTGTTAGCGCC
TAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGATGGATGAACTTGT
TCGATAAGAATGATACCAAGAATTTCATTCAAGGTTTGTTTTGATTATTT
TACAGATCCGGTGTCGAGATTGCAAGACGTATGTTGAGATTAGACGACTC
TACGGTAATAATTATGCATGGTTTTATCATTATTTTTCTGCTGGACTACA
TAATTATTCAACAGGGTGGCCTCTTTGAAAAAAGGTCTATTTCAGCGCTT
GACCAATCAGAAACTTTGCAGATTTTTGGAAACAGTAGCAGAAATATTCT
TCCGATGTTCACTTTTTTTTGCTTGGAAGAGCCTTAAAGCACTCCATCTT
AAGGCACTCCCTTCGGGCTTTACAGAAATCTGTGATCGGCTGCCCGCTAT
ATAAAACGTAAAGGCCTTTTCAGACTTTGAGTAATCAACGTTAGCAGGTA
ATCGAGACAAGAGTTAGTATCGGAAAATAAAAGTTGGTAGGAAGGAAAAA
AAATGGTATCGAAAAAAAAGTTGGTGTCGAAAAAAAAAAGTTGGTGTCGA
AAAAAAAAAGTTGGTGTCGAAAAAAAAAAGTTGGTGTCAAAAAAAAGTTG
GTAATAAAAAGTAATTCGGCGCGCCATATTCCGGTGCGGAGATGCAAAAA
AAATCTGGGAAAAGCAATTTGTTCTTTTAAAGTACCGTAACTTGGTCTAA
TGTCGACATCCCTCGTCTAAATTCAACACCCTTTTCTAGAGCTGAAAAAT
AAAAAAAGGTCAAAATTATTTTTCTTTGCTTAGTGGTAAGGAAGGATAGA
TCTTTTTTCAATCACCGATTCCAACTTTTATATTATTCCTATCTCTAAAG
AAGGGTGTCGAAATTAGAAGACGGATGTCGAGATTAGACCAACTTACGGT
ATAGCTTTTTTCTCAATTGCTCTGACGACCATCGAAAAATTGTTTTAAAA
ATTGTTACTGGCGTGATTAAAAAAACCCGGGAGTGTTTTTGACCACCCGT
CCCCCCGCATGCATTTTTAACACTCGTTGCGACGCGAACAGAGCATTTTT
TTGATGACCGCCAAAGGGGTTACGCACAGAAAACAAGTTTCATTAATTTT
CTAGTGGGGGGCTGGGGCTCCACTGGATCTCCAAAGGGCTTCAAAATTCT
CACCCTCACCAATGATAATGAATGTGTATCATTAATGATTAATATATTAC
GACGGTGGAAAATGTAGAAAATACACGTCTCACCTGGATATGATCGTAAT
TGTGTTCCCATAAAAAATGAAAACTGAAACGAAAAAGAAAAAGAAGAAAT
TGTGAGAGAAAAATTTTTGTGATTCATCTAATCTAGACCACCGGAGAACT
AGAAATAAGCACGGAGTGTCAAAATTAGGATTCTGAAACACCGTTCTCTC
CACGATGCCCGTATTCTAAGTTTTGTATGTTCAGCATCGGAAAATCAAAA
GTATGGCCGCGCGCAGACAAATTCCTTTGCCACAAACTTACGGCTGTTAC
ATCACCATAGTGTTCTCCCCCCCTGGATTCAGGGGGGGATGGGTTTTGAG
GTCAAAAGGACGTATAGGGGGGAAAGAATTTTTTTTGAAGCCAGGGTGGG
GAAAAACGAGGGGGGGGGAATAGAAAATTTTCATTCTAGGCATGGGGGGG
AACTCACCAAAATCAATTCAAAATTGAAAAACATCTGGTTTTATGAGATG
ATATAGCATAGTGCTTAGTTTTATTAATATTATGGTTTAAAAACAACCAT
CCTTTCCATTTCTTCTTGAATTAGAACTACCATCAACCATAGGGAAAACA
ATAAGCGTTAAGTTCATCAAATTACAGCTTTTTAATTTTTTGCTTGAGGG
GGGGACAGAGAAATTTTTGGAGGCAGGGTGGGGAAAAATGAGGGGGGAAT
GGAAAATTTTCATTCTAGGCATGGGGGGGGGGGGGGACAGAGAAATTTTT
GGAGGCAGGGGGGGGAAAAATGAGGGGGGAATGGAAAATTTTCATTCTAG
GCATGGGGGGGGGGAAGAGACCCTGAAGGACACTCTGATCACAGCATAAG
AAGAACAATATTTTTTCCAAATCAAAATACAAAGACAATAAAAAATGATT
ACCTGGTACATCTTGTTGAATTTGATTCATCTCCTTAATATTGATTCTAA
ACAAAAAGACTGGTGTTAATTGATTGTAAAACTATTGCAAAATCTTAAAT
TTTCTGATTTTCCACCCCGTGCAAATGCACAAAGTTCCAAAAAACCAGTG
TATTTACACCGGGTTTTCGCGCTACTTTCCTATTTGAATACATTCCCAAA
GCTTCGTAAAGCTAAAAGTAAAGGAATTGCTATAGTACGGTCCTGTCTTC
TTTGTTTGAGTGAGAGTATATCTTGTATTTTTCTATCTTTGATCTGGAGT
TTCCTGGAGTTTCTTAACCTTTAGGATGTTTCTAAGTTGGACTTTATACT
CAATTTTTTCAATTTTGATATTTTGAAATTTGCTAAATTTGAGAAATTTG
CCAAATTTGAGTTCCGGATGGGATTCGATCTAATCCACGCATGAAAAATA
CCCTTGGTTCCTTGGTTCAGAAGCTCCGTAGGCTAGACCACGAAGCCACG
GCACAAATTTGAATTCACAATCTACTTTTAGTGTACGTCTTTTACAGACC
TGTATATAAACTGTAGCGGTATCCCTACTATGTATTACCAAGGCCTAGAG
CTCTATATTTACCTACCAATGCCACTCCCAACCCTATTTTTATTCAATGA
TTTTTTACAGCACTTTTCTAACTCTCGTTCATATATTTTTATTTTTCAAA
CTATTTTAGATAGATATATATTTTCACTGTATGATAGGCATTTTAAGAAG
ATTCTGAGTTGTTTTAATTAACAAATTTTATTGCCTTTTAAGCCAATCTA
AGGGGTAGAAAATCTGAAAATTTTCTGGCCTTTGGCCTAAACCATGGTGG
GGCCTGCGGGTATCACTATATACCAAAATATTATTATTATTATTATTATT
ATTATACAGTATACAAGTTCACAGGCCCGAGGTGGGCCTCTACGAACCGG
TTTGATTACACTTCTAATTTGTTAAATATCTAAGTTTGTGTCTTTTCCAC
GCTTCATTAAGGTTTTGTTTAAACAAGTGAATGGAGGTCGACTCGACGAC
AAATCGTGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCTTTGTAAACGCTCCTC
ATAGTGGAGATTACGATACTGCGGAATCAGTCTTGTTGCCCGTCTTTGGA
CCCCTTCAATCAGATTAACGCTGCGGCGTAATTTCAGCTGCCATACTGAT
TGTGCATATTCTAGATGCGGTCTGACAAAGGTCGTATACAATGTGCAAGA
TGCCGAAGGACTCAGGTCACTAAAGCTTCTTTGGATGACTCCTAAGATAG
AATTCGCTTTATTGACTTGTCTAGAGATATGTTCCTCAAAAGATAATTCA
GAGTCAATCAAGATGGCTAGGTCTTTTTCTTCAAAAACATGTTCAAGTTC
GTTACCTCCAAGTTGGTATCTGTGTGCATGCTTAAAGGGATAATCAGATG
GTCTGAGATATTTTGCTTGCAGATAGCTTCTAGGATTTTAGGAAAAACCT
CTAAATTTTTCGGTGTACTTATTTTCCTAACTCAAGTTATGCCAATTTGA
AATCTCGAAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGAAAATAAGTACACCAAAAA
ATTTAGAAATTTTTCCTAAAATCCTAGAAGCTATCTATAGGCAAAATATC
TCAAACCATCTGATCATCCCTTTAATATTAGCAAATTTACCTATAGTCAA
GACATGGCATTTGTCAGAATGAAACTTTAGTAACCAATCTCAGGACCACT
TTTCCGATTCACAGATATCTTTTTGAACAACTAGAGAGTCTCTAATAGAA
TTGATTATTTTCACTATCTTCGTATCGTTGGCAAAGAGAAATGCATCGGA
GACTACCTTTTCTGGCAAATCGTTTATGTAGATAACAAAGAGCAGAGGCC
CAAGTACGCTTCCTTGAGGAATTCCACTTATGACATGGTCAGTAGTTGAT
TTAGCTGAGTTAACCTTGACTAGCTGCTTGCGGTCTGATAAAAACGCTAT
AATCCATTTTAACAGGTTTCCGCTGATCCCGTAACATTCTAGTTTCTTCT
AATATCTCTATCAACGTACAACGAATTTTCCGTCTCACAGAAAAAAACTG
CTTTGACCACTGTGCAATTGTGGTAAGAAATCCTACTACAATTGAGGGAG
TTCCTTGACTGTATGGTGTATGGGATGAGTGCGGTGCAGTGCTGGCAAGA
GCTGATTTTTGAAAGTCTGAAATTGCACTAAAATTTGATTGAAAGGTCCA
AAAAGGCAGTGCTGACTTCCTTGTACAGGTGAAAGTAGGTTTTTTTGTTA
TTCAATCTGTACGGATGAAAATTGTTTATACCAGTTAGGGTCAGGTTCAA
AATAGGGTTGAGAGAAGCATTGGTTGGAAAATATAGGGCTCAAGTCCCCA
GTCGGGGTACCCCTAGGGTTTGGGCTAACCCTGGTATGTTAATATGTTAT
ATAAAGGTCTGTAAAATACACACTATAAGTATATTGTGAATTTGGTTGGG
TTGTGGCTTTGTGGTCTAGTGGTAGCGTACAGAGTTTCTGAACTGAAGGT
ACTTTTCATGTGTGGGTTCTATGTTTATTCAAATATATAAAATAAAAATT
ATTAAAAAATAAAATATCTTTGTCAACAGAGAAATCTGCAAAATGTTAAG
TCACTAAATGTATAGTTGAATTAAGACCAGAAAATTCTGAAGTGACTCAG
AAATTTGGACAAAAAACTCAGACCTCTGAAGAAAAAAAAAATCAAACAAA
ATCTTTAAATGAACTTATCTATGACTCCAAATAAGAGCACCATGATAACT
TGGTAGAAGATCAATTTTCACATGCTATTAAATTTTTATGTTAATGTGTT
TTTAAAACAATGTGTCTACATACTTGGCACAAGTACACAGTTTTGCTGAA
TTTTGCCTCTAGGATTTCTTGGCCTGTCAATAGTATGAGTGAAAAATATT
TAAATCAAAAGAGTCGTATGTAATTTAATAACCTTTGTTCCTCCCTTCAT
TAGTTTGTCTGTTCATCTGTTACCAGCTTTTCTTGGAATTGACCCTAGTT
TATTAATACTCTTTTGCACAGTGATGTAAAATGACACTACCCAAAATGCA
AAAAGTACTGATGAGCCTGATTTTTGAAAACATAAATTTTTGGGCAAATT
TGAGCCAAAAATGCCTAAAAATAGGGTGTTTTTTTTGGTAAATGTGATTC
CTTATTGAAATGTAGGATTTGACTATTTTCAAAAGAAAATCTGTAGGCAA
ATTTTGGCCAAATTTGGATTTGTGGAAGTGGTTTCATTAGATTTTATCTA
TAAAGAGATATAGAGTTATCTTTACAGAAAAGAAATAGTAGGGGGAATTT
TGTTCGATTTTTTGGAATCACTCGAATGTTTTGTTAGAAGCACTTGTTAT
ACATTTTTGGAAAGCTAAGGGGTAGGGGAATCAAAATTACAATGTTTCCA
ATTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAATATGACGGTCTC
AGGCAAAAATCATAGGGTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGAAACAGCTATTTTGTCCAGTTTTTGCGCTTTTTGAAGCTCAATATCT
CGAGTTAGGTACTAAAATCACCTATACTTGCAATATATCTATAATCTTAA
TTTTTTGAGAGCTTTCCAAAAATATACAACAGATCTCCGTTTTCTTGAGC
TAAAATTTTCATTAATTTTTAACCCTATGATTTTTGCCTGAGACCGTCAT
ATTTGTCCGAAAATCACACCAAAGTGTCCAAAAAAAAATTGGAAACATTG
TAATTTCGATTCCCCTACCCCTTAACTTTCCAAAAATGTATAACAAGTGC
TTTGATCAAAACATTCGAGCGATTTTACAAAATGCCCTCTACTAAAAGGA
TTGTTTTTGCCCAAAACCTAGCATGGTTTGATTTCCATCTTATATGGGGC
TCCTTAGATCTAAAACACCAGCCTGTCAACCTCTCAACAAATATCACTTT
TTTTGTTGAATTAATTTCAAAACCTTGAGTTCTCCAAGTATTCAAGTTTC
AAAAAAGCTTTAAAATTTATGTCCAAAACTGAAAGATTTATGAGATTTAA
AAAATATCAAGAAATACTAGAGGTGTACTGCTTCATGTTAGGTCCAAAAA
ATGTTGTGCTCCTTTTTCTGGCAATTCACCTTGGAGCGGTTTGATTGAAA
GTTACTGGCACTAGGGTTATTGGGTTTATTTTCAGATTTGAAAAGCCCTG
AGTAAAGAAAGGTTGTGCAAACCTTCAATTTCTATTGCTAGGTAAGGGTG
GTTTTGCAACTACAAGTAATTTATCTTTGTCTAAAATTAAAATCACAATC
TAAATTTCTTTCTGTACTTTGTAATATAATTACTCTTTCAGTACTAAGAA
AACAAAAGTTAAAATGAGTATAGCACTTGGCAGATTGGCTGAAGAGCGAA
AGGCATGGCGTAAAGATCATCCATTTGGTTTTGTTGCAAAACCTGTTAAA
AATACTGATGGAACTTTGAATTTGACCAATTGGGAATGCACAATACCTGG
TAAAAAAGGGACCATTTGGGAAGGAGGCTCTTACACTCTACGAATGTTAT
TCAAAGATGACTATCCTTCTTCGCCACCAAAGTGCAAGTTTGAGCCGCCA
CTATTTCACCCCAATGTATATCCGTCGGGCACTGTGTGTTTGTCACTCTT
AGATGAAGATAAAGACTGGAGGCCTGCTATAACAATCAAACAAATCTTAC
TCGGCATTCAAGATTTATTAATAGCGCCCAATATCCGGGATCCTGCACAA
GCTGAAGCTTACACGATATATTGTCAAGACAAAGCAGAATATGAAAAGCG
AGTGAAAGCCCAAGCTAAGAAGTTTGGTGCCAAGTGAGACATGCTTTCGG
TTCTTCTTCAGTTTTTAGCTAAAATTGTGATGTTTGTGCATGGAGCACAA
TTTAACAACATCCCATTAAAAAGAACTTGTAAATAAAATCAATATCTTCT
CATAAATCTAATTACTAGCATGTCTGGTATGTACCTGTCTGAAAAGTGGG
AGATTCATCACATTCACCCTTTTGCTTATTTCTTTTATTTAATTTAAAAT
TGTTTAAAAATTCGTGGAATGGTAGAAATTTCAATTGGTTCACTTTATGA
AATTAGGTCTATCTTGCAGATCATTTTGTAGATTTTAACCATATTTTTCA
TTCATCTATTACTTCTTAAACTGTTTCTCTGGGACAAATTATGGGTGGTT
CTTAAAAGTGTTTGTTGGAAAGATAATCAAAATCATATTTTCTTGTTGAA
CTATAATCCTTTGAAATTTGTAGCATAGTGCCTTCTATATTGTCATGGTA
GTGATGAATAAGTTCT Coding sequence (CDS) from alignment at sc0000240:130730..144895- >TCONS_00016490 ID=TCONS_00016490|Name=TCONS_00016490|organism=Clytia hemisphaerica|type=CDS|length=474bp|location=Sequence derived from alignment at sc0000240:130730..144895- (Clytia hemisphaerica)
ATGAGTATAGCACTTGGCAGATTGGCTGAAGAGCGAAAGGCATGGCGTAA
AGATCATCCATTTGGTTTTGTTGCAAAACCTGTTAAAAATACTGATGGAA
CTTTGAATTTGACCAATTGGGAATGCACAATACCTGGTAAAAAAGGGACC
ATTTGGGAAGGAGGCTCTTACACTCTACGAATGTTATTCAAAGATGACTA
TCCTTCTTCGCCACCAAAGTGCAAGTTTGAGCCGCCACTATTTCACCCCA
ATGTATATCCGTCGGGCACTGTGTGTTTGTCACTCTTAGATGAAGATAAA
GACTGGAGGCCTGCTATAACAATCAAACAAATCTTACTCGGCATTCAAGA
TTTATTAATAGCGCCCAATATCCGGGATCCTGCACAAGCTGAAGCTTACA
CGATATATTGTCAAGACAAAGCAGAATATGAAAAGCGAGTGAAAGCCCAA
GCTAAGAAGTTTGGTGCCAAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016490-exon-sc0000240-1575043694:144845..144895 | TCONS_00016490-exon-sc0000240-1575043694:144845..144895 | Clytia hemisphaerica | exon |
| TCONS_00016490-exon-sc0000240-1575043694:130730..131704 | TCONS_00016490-exon-sc0000240-1575043694:130730..131704 | Clytia hemisphaerica | exon |
| TCONS_00016490-exon-sc0000240-1510915933:144845..144895 | TCONS_00016490-exon-sc0000240-1510915933:144845..144895 | Clytia hemisphaerica | exon |
| TCONS_00016490-exon-sc0000240-1510915933:130730..131704 | TCONS_00016490-exon-sc0000240-1510915933:130730..131704 | Clytia hemisphaerica | exon |
| TCONS_00016490-exon-sc0000240-1491911889:144845..144895 | TCONS_00016490-exon-sc0000240-1491911889:144845..144895 | Clytia hemisphaerica | exon |
| TCONS_00016490-exon-sc0000240-1491911889:130730..131704 | TCONS_00016490-exon-sc0000240-1491911889:130730..131704 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240 | supercontig | sc0000240:130730..144895 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00016490 vs. Swiss-Prot (Human)
Match: UBC9 (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 9.307e-94 Identity = 130/154 (84.42%), Postives = 140/154 (90.91%), Query Frame = 2
Query: 77 SIALGRLAEERKAWRKDHPFGFVAKPVKNTDGTLNLTNWECTIPGKKGTIWEGGSYTLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEDKDWRPAITIKQILLGIQDLLIAPNIRDPAQAEAYTIYCQDKAEYEKRVKAQAKKFG 538
IAL RLA+ERKAWRKDHPFGFVA P KN DGT+NL NWEC IPGKKGT WEGG + LRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS+L+EDKDWRPAITIKQILLGIQ+LL PNI+DPAQAEAYTIYCQ++ EYEKRV+AQAKKF
Sbjct: 3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
The following BLAST results are available for this feature:
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