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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016538 ID=TCONS_00016538|Name=TCONS_00016538|organism=Clytia hemisphaerica|type=transcript|length=5352bp
AGATCACGGAAATTTGACTTTATTACAGTAATGGGGCTTTACTTCAGTGC
TCTTGCTCTTTTTATCTTCAAAGTACCCTTTCAatatttgtttacattaa
tATGTTTTTGGTGAGGTATTGGAAGGACCCAGTTCTTAGATGCAGGAGAT
GTCTCTCCACTTTTGTTGTTCGAACTTTCCCTATCACACCGCTCAATATG
TTTTGACGCCAACTTGTTCGAGGGTTGGTTTTGAAGATATCGGTTTACCA
ATTACTCATATATAAAGAAATACACAGtctatcaaattttatttgaatgt
ACAGAATCTTCCTTATGGTTATCTGGagcttttgaaaatttaaccttTCA
CATATTTTTATTGACATCCATTTACTgcccagctagcacacaacgttgtt
tcaacgttcatctaacgttatatggacgttgtggacgttagataaacgtc
gaaaaaacgttgtggtGCCAGCTGGGTGNacacaacgttgtttcaacgtt
catctaacgttatatggacgttgtggacgttagataaacgtcgaaaaaac
gttgtggtGCCAGCTGGGTGATAACCTGGTATATTTGAACTAAGTATTCG
TAGTTCAGAACGTGCATTTTAACCTTTATCCTTTTAAACCTTAGAGGATT
TTCTAGTATTTACCaataatttaatgaattatTTCACTGTGGAAATAGAT
TTACGTAGCATTTAAAGGGGACCAAAGCGGTTTGtatgatggcgtgatta
gggtgttttttcttgcctgataGGGCAATTATTCTAGATGCGATGCCGGC
GATGCTTGATAATGACCGCTATTTTTGCGtgaataattaattaattttgt
caattttctaaGCTTCTGGCATCCTCTAATGGTTTTGTGCTCCCATACTA
CCTACGGTTTTGTAGATATCTGTGATTTTCGTAATCCTGATATCGTGATA
AGTGCAAAGAATTTAGGGGTGCGTGTTGAAGGGTGCCGTTGGGAAGTACC
GTGAGTATTAGAGTATTAAAGCTCCAATGAAATACCAATATTTTCTCTta
tgaaaacttggcctctggtaCCCAGGGTAGTTGTGAAGGGCaactatttt
gtaaattttaatttttcaccaCATTCCCGAGCAGCAACTTTTAGAAATCA
AGCGTGCgcataaaaaacaacaaaaaattttttgaacatATCTTTTACgt
tataattttctcaaaccctgattttctttcattttcgttGATTTCTTTTG
TAATGCGGGAATGCCATTATTTCCCGCGTGTACGCCACTTTCCGCACAAG
GGCGCGCGGGCGGTTTTCTGAATTGTTCATCAAATAAGAATGGCGTAGCT
AGCAAACAAAGAAATAATCTCGTGGTGGACTGAGTCGAAGTTAGTTCTAT
TCACGACTTGCTTAAAGAGATGGCGTTTTACTGGTCCAGGCAGTATAGTT
CTGATTTAAAGGTTTAATATTTTGGAATAGTAAAGAGCTTTCTTTTGTAT
TGGAAAATATTTATCTGTGCTTTATCAATTTGATAtggatttttaaaaag
agatttttggTTAATTAGTTGTTTTTTATCGGCTATTTTTCGGAATATTT
GGGGAATATTTAGACATTTGATACGAAGACTAGCATTTGATTGGCAGGCA
AGAAGATTAGAGTAATTTATCTTAGAGTtgtgttatttttaaaatatgtt
ttttaatcgatttgtaggcatttttttttttaattttaagtctGAACGTC
AGCGGAGATGTGTAGTTATTGTGCGCTTTAAAAGTGAACAAAATCGGGAG
TTAAAATCGAGaaattttccatattttctCGCTTCAGAAATTGATGCGAG
TTGCAGTAAAAATTTGTACAAGGTTCAAAAATTAATTGGATTGAGAAAAA
CTGCTATCGTACGTTTCAAAACATCACAAGAAATTGCTCAAAAAAATATC
GTTCAACTTTTCTTGTTTGATGAAtcgctgaaaaaaaatcagaccATATc
acaccactttcgttttctctctCGCGCCTGATTCAAcattatgacgtaat
gttttcgaatttttgatTGATGGTTCGACGCGCGCGAAAGAGAAAAACAT
TCCATTCAAAGTGGTATGATACGTCTGGTGGAACAAAGGTCGGTCGTGAA
TATTTTATGAGTTATTAAAGGGACATGGTTTCTATGAAACCCTATATGTT
TTGATTGTAAATAaagctttttgttttgttacatGGATAGATTTTTTAAT
ACAAAGTTGATTTATCTTCTTGGCTTTAGATTTTTAATAAATAtcataaa
aagttgaaattttttaatcagtgGAGCTGTTAATTAtccttttattttat
tgttttgaaaggGATTATATAGAAACCAGTCTTTAATAGACGGGAATTTC
CACATGTACATTTCATTGAGAAATCAGTCGATTAAATGGATCATAACAAA
AAGAGAGACTTGTAAGGGGAAAATGTTGAGATGTTACGATGGACTTTCGT
TCTCTCAAACCATGGAAAGATCGCTGATTTTGTAATTATATGATTGTTAT
CCTAATCCTAAATGAGATTCCAATACAATATTTTAGAATCAGGGTGTTTG
GTTGTCAATTAAAACCAGGTGTTTCAAGTCAGAATTTATgttatttttca
ggaaaaatatataaaaacgAAAACTCATTTGGGAGTATAAAACAAGCTGT
TATTCAAATTCACAACACACGGTGTATTAGAACACAATGTTATGCGACGA
TGTTCAATTATATCTTGTCCTCTTTTGTGGACTATTGTTATTGTTGAAAC
AAAAGCTTTGCCCCCGGATGAAAACACCTGCAGCATACAGTATAAATTCA
ATCACTCACCCATCATGCAATCATCAGAAACTTGAAGAACAAGAAGACAA
TCAGTCATCTAAATATCTTGATTACCTTGGACAACTCACTCTTGTTAGTA
AACTCAACTTTATccaagaaattttcacagtcaaATCTCAGAAATCATCA
TGATTGAAGTAAACAGTTGCAACGTGGAATACACCTCTGACGAGATCCAA
TCCAAATACATTTACCAAACGACCAAAGTCGAACGTCCAACACCTCAAAG
GATCACCGTCACACCTGTCGATGTTGAAGTTAAATTCAAAGTCCAACGAC
ATGTCCCTAAGGTTGGAGTCATGCTTGTGGGATGGGGTGGCAACAATGGT
ACCACTTTCACTGGAGCTTACCTTGCCAACAAACACAACATCTCATGGAA
CACCAAATCTGGTGAAAAGCAACCGAACTGGTTTGGATCCTTATTGCAAT
CATCTACAGTCAGTCTTGGCTTCAGTGAGCAAGGAGAAGAATTCGTTGCT
ATGAGAGACGTCTTACCAATGTTACAACCAGATGACCTCATTATCGATGG
ATGGGACATCTCCTCTCTCTCAATNGAGAAGAATTCGTTGCTATGAGAGA
CGTCTTACCAATGTTACAACCAGATGACCTCATTATCGATGGATGGGACA
TCTCCTCTCTCTCAATAACTGATGCCATGCAACGGGCTGAAGTCTTTGAT
TTCGACCTCCAACGAAAACTTGCTCCATACATGAACGACATGAAACCAAG
ACCTGCCGTCTATCGTCCAGACTTCATCGCAGCAAACCAATCGGACCGCG
CGGACAATGTCGTGCTTGGATCGGCCGAACAACAAATGACCACCATCCGC
AAGGATATCCGTGACTTCAAGGAGAAGAACAAACTGGATAAGGTGATCGT
GTTATGGACAGCAAACACTGAACGATTCTGTGACGTCATCCCTGGTGTTC
ATGACACTGCAGAAAACATCTTGGATGCCATCAAACGTGATGAAATTGAA
ATCTCAGCTTCATCAATCTACGCCTTGGCAAGTATTCTGGAAGGTTGCGC
GTACATCAATGGATCTCCACAGAACACCTTTGTTCCTGGTGTTATTCAAC
TGGCTGAAGAACGTAATGTTTTCCTCGGTGGTGACGACTTCAAATCTGGT
CAAACGAAAATCAAATCAGTACTGGTCGACTTTTTGGTTGGTGCAGGCAT
CAAACCAGTCTCGATTGCCAGTTACAACCACCTTGGAAACAACGATGGAA
AAAATCTCTCAGCACCAAAACAATTCCGTTCCAAAGAGATCTCCAAGAGC
AATGTCGTTGATGACATGGTTGAATCCAATCGTATCTTGTACAAAGAAGG
TGAAAAGCCGGATCATGTCGTCGTCATCAAGTACGTACCGACCGTCGCCG
ACAGTAAACGAGCGCTAGACGAATACACGTCCGAAATCATGATGCATGGT
ACGAACACCATCGTCCTTCATAACACCTGTGAAGACTCGCTTCTCGCGAC
ACCCATCATTCTTGATCTCGTCCTCTTAACCGAATTATGTCAACGAATCA
AAATGCGAGTAGGTACAGGTGAATATCAAACCTTCAATTCAGTTTTATCG
CTACTTTCTTACCTGTTGAAAGCTCCACTTGTCCCAAAAGGCACACCAGT
CGTTAACGCTCTCTTCAAGCAACGGTCTGCTATTGAAAACATTCTAAGAG
CTTGCCTAGCCTTACCTCCACAAAACCATATGACTTTGGAACACAAGCTT
ATGGACATGCAATCAGTTTACAATGAGATGAAGCCACAAGCTCTTATTTC
TTCAGACAAGAAAGGAGAACTGAACGAAAAATCATCACCACCAATGCGAA
CCAAATTAACGAACGGACATACAAACACACAGAAAGAAATTTCTATcatt
taaataaaaacattttgaaaaacgaaacaactgtattgaaaaatttttag
tttatttaagAATAGATTTGTTTTGAATCGTAACTAGTAATGTAAATATT
TAGATATAATGGTCAGGTAGGGTTGGAAATGAATTGAGCAttaatttaaa
aagatttttacacTCCGATAAAATCTATTTTAGGAAAGGAATCACTGTTA
GAGATCATAAaagcaaattattttgaaaataattcataGTAGATAGGAAT
ATGGTTTGATAGACATAGAAAGTATAATTAATAgctatttgatttatttt
tttgatattatgttttGTAGATTATTATTTTTGATAGCTCCCGGTGAGCA
CTATAATATCATGTAAATTCTATAACATTGTTAAAGACTATTTCGTCgaa
ccaaaattttgattttaaatttgtcTATTCTTTGATCCAAGTTTTCGGCC
TTCATACCGTTTCGGATTTTTGTTTTAGTAAAGTAACTTTACCatagcat
ggaggtataaagaaagacaggagatgaatttgtcggtaattggtcgttaa
agtcttttgatttcttttatgtaataaatcaaaagaaattctaggctcgc
cc Run BLAST on NCBI protein sequence of TCONS_00016538-protein >TCONS_00016538-protein ID=TCONS_00016538-protein|Name=TCONS_00016538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
MGHLLSLNXEEFVAMRDVLPMLQPDDLIIDGWDISSLSITDAMQRAEVFD
FDLQRKLAPYMNDMKPRPAVYRPDFIAANQSDRADNVVLGSAEQQMTTIR
KDIRDFKEKNKLDKVIVLWTANTERFCDVIPGVHDTAENILDAIKRDEIE
ISASSIYALASILEGCAYINGSPQNTFVPGVIQLAEERNVFLGGDDFKSG
QTKIKSVLVDFLVGAGIKPVSIASYNHLGNNDGKNLSAPKQFRSKEISKS
NVVDDMVESNRILYKEGEKPDHVVVIKYVPTVADSKRALDEYTSEIMMHG
TNTIVLHNTCEDSLLATPIILDLVLLTELCQRIKMRVGTGEYQTFNSVLS
LLSYLLKAPLVPKGTPVVNALFKQRSAIENILRACLALPPQNHMTLEHKL
MDMQSVYNEMKPQALISSDKKGELNEKSSPPMRTKLTNGHTNTQKEISII Run BLAST on NCBI transcript from alignment at sc0000241:275699..284097+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016538 ID=TCONS_00016538|Name=TCONS_00016538|organism=Clytia hemisphaerica|type=transcript|length=8399bp|location=Sequence derived from alignment at sc0000241:275699..284097+ (Clytia hemisphaerica)
AGATCACGGAAATTTGACTTTATTACAGTAATGGGGCTTTACTTCAGTGC
TCTTGCTCTTTTTATCTTCAAAGTACCCTTTCAatatttgtttacattaa
tATGTTTTTGGTGAGGTATTGGAAGGACCCAGTTCTTAGATGCAGGAGAT
GTCTCTCCACTTTTGTTGTTCGAACTTTCCCTATCACACCGCTCAATATG
TTTTGACGCCAACTTGTTCGAGGGTTGGTTTTGAAGATATCGGTTTACCA
ATTACTCATATATAAAGAAATACACAGtctatcaaattttatttgaatgt
ACAGAATCTTCCTTATGGTTATCTGGagcttttgaaaatttaaccttTCA
CATATTTTTATTGACATCCATTTACTgcccagctagcacacaacgttgtt
tcaacgttcatctaacgttatatggacgttgtggacgttagataaacgtc
gaaaaaacgttgtggtGCCAGCTGGGTGNacacaacgttgtttcaacgtt
catctaacgttatatggacgttgtggacgttagataaacgtcgaaaaaac
gttgtggtGCCAGCTGGGTGATAACCTGGTATATTTGAACTAAGTATTCG
TAGTTCAGAACGTGCATTTTAACCTTTATCCTTTTAAACCTTAGAGGATT
TTCTAGTATTTACCaataatttaatgaattatTTCACTGTGGAAATAGAT
TTACGTAGCATTTAAAGGGGACCAAAGCGGTTTGtatgatggcgtgatta
gggtgttttttcttgcctgataGGGCAATTATTCTAGATGCGATGCCGGC
GATGCTTGATAATGACCGCTATTTTTGCGtgaataattaattaattttgt
caattttctaaGCTTCTGGCATCCTCTAATGGTTTTGTGCTCCCATACTA
CCTACGGTTTTGTAGATATCTGTGATTTTCGTAATCCTGATATCGTGATA
AGTGCAAAGAATTTAGGGGTGCGTGTTGAAGGGTGCCGTTGGGAAGTACC
GTGAGTATTAGAGTATTAAAGCTCCAATGAAATACCAATATTTTCTCTta
tgaaaacttggcctctggtaCCCAGGGTAGTTGTGAAGGGCaactatttt
gtaaattttaatttttcaccaCATTCCCGAGCAGCAACTTTTAGAAATCA
AGCGTGCgcataaaaaacaacaaaaaattttttgaacatATCTTTTACgt
tataattttctcaaaccctgattttctttcattttcgttGATTTCTTTTG
TAATGCGGGAATGCCATTATTTCCCGCGTGTACGCCACTTTCCGCACAAG
GGCGCGCGGGCGGTTTTCTGAATTGTTCATCAAATAAGAATGGCGTAGCT
AGCAAACAAAGAAATAATCTCGTGGTGGACTGAGTCGAAGTTAGTTCTAT
TCACGACTTGCTTAAAGAGATGGCGTTTTACTGGTCCAGGCAGTATAGTT
CTGATTTAAAGGTTTAATATTTTGGAATAGTAAAGAGCTTTCTTTTGTAT
TGGAAAATATTTATCTGTGCTTTATCAATTTGATAtggatttttaaaaag
agatttttggTTAATTAGTTGTTTTTTATCGGCTATTTTTCGGAATATTT
GGGGAATATTTAGACATTTGATACGAAGACTAGCATTTGATTGGCAGGCA
AGAAGATTAGAGTAATTTATCTTAGAGTtgtgttatttttaaaatatgtt
ttttaatcgatttgtaggcatttttttttttaattttaagtctGAACGTC
AGCGGAGATGTGTAGTTATTGTGCGCTTTAAAAGTGAACAAAATCGGGAG
TTAAAATCGAGaaattttccatattttctCGCTTCAGAAATTGATGCGAG
TTGCAGTAAAAATTTGTACAAGGTTCAAAAATTAATTGGATTGAGAAAAA
CTGCTATCGTACGTTTCAAAACATCACAAGAAATTGCTCAAAAAAATATC
GTTCAACTTTTCTTGTTTGATGAAtcgctgaaaaaaaatcagaccATATc
acaccactttcgttttctctctCGCGCCTGATTCAAcattatgacgtaat
gttttcgaatttttgatTGATGGTTCGACGCGCGCGAAAGAGAAAAACAT
TCCATTCAAAGTGGTATGATACGTCTGGTGGAACAAAGGTCGGTCGTGAA
TATTTTATGAGTTATTAAAGGGACATGGTTTCTATGAAACCCTATATGTT
TTGATTGTAAATAaagctttttgttttgttacatGGATAGATTTTTTAAT
ACAAAGTTGATTTATCTTCTTGGCTTTAGATTTTTAATAAATAtcataaa
aagttgaaattttttaatcagtgGAGCTGTTAATTAtccttttattttat
tgttttgaaaggGATTATATAGAAACCAGTCTTTAATAGACGGGAATTTC
CACATGTACATTTCATTGAGAAATCAGTCGATTAAATGGATCATAACAAA
AAGAGAGACTTGTAAGGGGAAAATGTTGAGATGTTACGATGGACTTTCGT
TCTCTCAAACCATGGAAAGATCGCTGATTTTGTAATTATATGATTGTTAT
CCTAATCCTAAATGAGATTCCAATACAATATTTTAGAATCAGGGTGTTTG
GTTGTCAATTAAAACCAGGTGTTTCAAGTCAGAATTTATgttatttttca
ggaaaaatatataaaaacgAAAACTCATTTGGGAGTATAAAACAAGCTGT
TATTCAAATTCACAACACACGGTGTATTAGAACACAATGTTATGCGACGA
TGTTCAATTATATCTTGTCCTCTTTTGTGGACTATTGTTATTGTTGAAAC
AAAAGCTTTGCCCCCGGATGAAAACACCTGCAGCATACAGTATAAATTCA
ATCACTCACCCATCATGCAATCATCAGAAACTTGAAGAACAAGAAGACAA
TCAGTCATCTAAATATCTTGATTACCTTGGACAACTCACTCTTGTTAGTA
AACTCAACTTTATccaagaaattttcacagtcaaATCTCAGAGTAAGtta
tacttttttcattttttaacttttacagTTTTAGCCTAGTTAGACACTGT
TCTGGTAAAACACCCTGCCCTTTACTTACCTTTACACCACAATATCTGAA
TATAACACTTTACCACTTTTGATCTTTCAACATCACTAAGTTTATAACTT
ACAAAAGGgtatactcgtattacattatagCTTTTGGAAAAAGTATAGCA
ACGTTGACCAGAGGGGTCAGTACTAAGATCTAGTACATCATGATGTTTAG
TGACGTGGGTGGTATATTCAAAGaacattaaaatcattttagtaccgtaa
cttggtctaatagaccttttttcaaagaggccaccctgttgaataattat
gtagtccagcagaaaaacaatgataaaaccatgcataattattacaatat
gcatgatacagtaactatgcatggctctatcattgtttttatggctggac
taaataattattcaacaggacgtcctctttgaaaaaaggtctatgtcgac
acccctcctctaattccgacaccctttttattagctgatagaaagattga
aactgtttttctttgcttgtgGTCACATAGTAATNTAATTccacacatgt
aaatgggtcattgtttgatgtccggcaaaatttccgggaaacagcctatc
cggtggtgcgcggatctaggtgggttccgcctcccccgtagatctttttc
ttgcaaagttgatcttcaaattagttttgaaggttggcttggctcaaatt
ttttcatctatggctcaaattttaggcaatttctcatagtttttgaaaat
gttaatttcatcaaaaagcgccgggttattttttcatgactCCCTTTAGA
atttttgcggcgcatttttttgcttgagagtcaagtaaacgatatagcgc
tttcgcaccattaatctttgatacgcattttggcgggaagctagtgtgac
taactgacaaaAGGgtatactcgtattacattatagCTTTTGGAAAAAGT
ATAGCAACGTTGACCAGAGGGGTCAGTACTAAGATCTAGTACATCATGAT
GTTTAGTGACGTGGGTGGtatattcaaagaacataaaaatcattttagta
ccgtaacttggtctaatgtcgacacccctcctctaattccgacacccttt
ttattagctgatagaaagattgaaactgtttttctttgcttgtgGTCACA
TAGTAATAATCCTTTtccaatcagtgattcaagctttcatattattcctg
tctctaaagaagggtgtcggaattagacgagggatgtcgatattagacca
acttacggtactatGGGGTACTACACGTTCtgacgttgttttttttatta
gaacatccacaatgtttgaaattttcagatttttaccattttttgagcat
ttttgcccatttttctaagatacCGGCTGTATTAGAGTCggtaaaacctt
aaaatgttcttaacttttccaTAACATTtcggccattgaagccttatgtt
cttatatagtttgttcttataaaaaaaatgtgtaaaatacTTAAAAGGGT
GATTTCCAGtgggcaccccccccccccttccagGATTctgggggggggtt
ggaaatttttaaattttttaaatttttttttttaaaaaaaaaacttttaa
aatactTAAAAGGGTGATTTCCAgtgggcccccccccccccttccagGAT
TCTGGGGAGAGGttgacaattttcaaattttttaaatcgggTGGGGGTTG
AGTTGACGAaaaatttcaggtgggggtaaccctataCAAGTGGGGGTGGA
AATTTTCTCAGTTGGGGGTTGTGGAGTTTTTTTGAGTGTATCTTTCATTT
GTTGTGAGAATctagttgaaaaaaaaattgaaaaaacaatccaagaaaaa
aactaaaaaatatttattttttgtcctCCAATTTCTTCCTCATATTCATC
AGGGGACTTCACTGGTATTTTGAGCGTTCGCAGGCAAAATTCTTTCTCCT
TTCTTATCTTTTCTCTTATATTACTTaagaaaagaaagtaaaataacTTT
GATAACTCTGATTTTTAATATTCTACAGTCTGTCCTGGGtgtataaaata
aaattctaaaaatcttaaaatgaaatgaaatgaaaaataatcagTTCTTG
GTATAAAAGAAGATGAATGTAATGCTTAAGAAGATTCAAATTCTAGAATT
TGTCATAAAATCATAGTAATTTTACGAGATATCAAAGCAAATCTCctaaa
aataacatcaaaatgcaAGAATGCCAAAAATATTGCTCACTCTCCAACCT
GCTCCAACTACCATCTATTATTTGCAACACTTTGATTTCAATTCTCAATT
TTGGTTACACAGAGTAGATCATTTTTCTCACAACTGAAATGCACTTCTAA
TCTGCCTCACTGTTGTAAAAATCCTTTCTGATAAAAATTGGGATATTGTA
CAAGTTACCTACAGCACACCTCCTAGGCTAAATTTATCATATCTAATTTC
ATAcatttgtttactttgaaaattcaaactttATCCTTAAAAGGTCAAAG
AGCCCATTAAAAGGTCAAAATTCTGAGGAAATTCTTTTTTCGACTTTTat
aatttcatgcttttatatTGTATTACACTGTCATGTTGGGAAATTGCGAG
GCAACCCTTCTATGTGAATTGAAAGTCCTGTTGAAAGATCTGTACAACCT
GAAATAACAGGGTTTCATTTGAGCTCTCTTGCACAATAGCTTTAGTTTCG
AAAACTATAAAAGGTAGAAAATTTCTGATAAAATCTCACATAAAAAATTC
ACTTGGTTTAAAAGTTGAAAGAGAAAAGAGGAAAGGTAGACTTGACTTAT
CTAGAACATCTTTGAAGGTGTGTAcatgttttaaaaatatctGCATAGCT
TTGAGTATTTCACCTCGATAAGTTTTTGTATAAACTCTTTGGAATAGTCT
TAAATTTTCTAAGGACTTTTTGTGATTCTTACTTAcgaagttttttatat
tttcaatacCTAAcctagtttttctttttttctctacaGAATCATCATGA
TTGAAGTAAACAGTTGCAACGTGGAATACACCTCTGACGAGATCCAATCC
AAATACATTTACCAAACGACCAAAGTCGAACGTCCAACACCTCAAAGGAT
CACCGTCACACCTGTCGATGTTGAAGTTAAATTCAAAGTCCAACGACATG
TCCCTAAGGTTGGAGTCATGCTTGTGGGATGGGGTGGCAACAATGGTACC
ACTTTCACTGGAGCTTACCTTGCCAACAAACACAACATCTCATGGAACAC
CAAATCTGGTGAAAAGCAACCGAACTGGTTTGGATCCTTATTGCAATCAT
CTACAGTCAGTCTTGGCTTCAGTGAGCAAGGAGAAGAATTCGTTGCTATG
AGAGACGTCTTACCAATGTTACAACCAGATGACCTCATTATCGATGGATG
GGACATCTCCTCTCTCTCAATNGAGAAGAATTCGTTGCTATGAGAGACGT
CTTACCAATGTTACAACCAGATGACCTCATTATCGATGGATGGGACATCT
CCTCTCTCTCAATAACTGATGCCATGCAACGGGCTGAAGTCTTTGATTTC
GACCTCCAACGAAAACTTGCTCCATACATGAACGACATGAAACCAAGACC
TGCCGTCTATCGTCCAGACTTCATCGCAGCAAACCAATCGGACCGCGCGG
ACAATGTCGTGCTTGGATCGGCCGAACAACAAATGACCACCATCCGCAAG
GATATCCGTGACTTCAAGGAGAAGAACAAACTGGATAAGGTGATCGTGTT
ATGGACAGCAAACACTGAACGATTCTGTGACGTCATCCCTGGTGTTCATG
ACACTGCAGAAAACATCTTGGATGCCATCAAACGTGATGAAATTGAAATC
TCAGCTTCATCAATCTACGCCTTGGCAAGTATTCTGGAAGGTTGCGCGTA
CATCAATGGATCTCCACAGAACACCTTTGTTCCTGGTGTTATTCAACTGG
CTGAAGAACGTAATGTTTTCCTCGGTGGTGACGACTTCAAATCTGGTCAA
ACGAAAATCAAATCAGTACTGGTCGACTTTTTGGTTGGTGCAGGCATCAA
ACCAGTCTCGATTGCCAGTTACAACCACCTTGGAAACAACGATGGAAAAA
ATCTCTCAGCACCAAAACAATTCCGTTCCAAAGAGATCTCCAAGAGCAAT
GTCGTTGATGACATGGTTGAATCCAATCGTATCTTGTACAAAGAAGGTGA
AAAGCCGGATCATGTCGTCGTCATCAAGTACGTACCGACCGTCGCCGACA
GTAAACGAGCGCTAGACGAATACACGTCCGAAATCATGATGCATGGTACG
AACACCATCGTCCTTCATAACACCTGTGAAGACTCGCTTCTCGCGACACC
CATCATTCTTGATCTCGTCCTCTTAACCGAATTATGTCAACGAATCAAAA
TGCGAGTAGGTACAGGTGAATATCAAACCTTCAATTCAGTTTTATCGCTA
CTTTCTTACCTGTTGAAAGCTCCACTTGTCCCAAAAGGCACACCAGTCGT
TAACGCTCTCTTCAAGCAACGGTCTGCTATTGAAAACATTCTAAGAGCTT
GCCTAGCCTTACCTCCACAAAACCATATGACTTTGGAACACAAGCTTATG
GACATGCAATCAGTTTACAATGAGATGAAGCCACAAGCTCTTATTTCTTC
AGACAAGAAAGGAGAACTGAACGAAAAATCATCACCACCAATGCGAACCA
AATTAACGAACGGACATACAAACACACAGAAAGAAATTTCTATcatttaa
ataaaaacattttgaaaaacgaaacaactgtattgaaaaatttttagttt
atttaagAATAGATTTGTTTTGAATCGTAACTAGTAATGTAAATATTTAG
ATATAATGGTCAGGTAGGGTTGGAAATGAATTGAGCAttaatttaaaaag
atttttacacTCCGATAAAATCTATTTTAGGAAAGGAATCACTGTTAGAG
ATCATAAaagcaaattattttgaaaataattcataGTAGATAGGAATATG
GTTTGATAGACATAGAAAGTATAATTAATAgctatttgatttattttttt
gatattatgttttGTAGATTATTATTTTTGATAGCTCCCGGTGAGCACTA
TAATATCATGTAAATTCTATAACATTGTTAAAGACTATTTCGTCgaacca
aaattttgattttaaatttgtcTATTCTTTGATCCAAGTTTTCGGCCTTC
ATACCGTTTCGGATTTTTGTTTTAGTAAAGTAACTTTACCatagcatgga
ggtataaagaaagacaggagatgaatttgtcggtaattggtcgttaaagt
cttttgatttcttttatgtaataaatcaaaagaaattctaggctcgccc Coding sequence (CDS) from alignment at sc0000241:275699..284097+ >TCONS_00016538 ID=TCONS_00016538|Name=TCONS_00016538|organism=Clytia hemisphaerica|type=CDS|length=1353bp|location=Sequence derived from alignment at sc0000241:275699..284097+ (Clytia hemisphaerica)
ATGGGACATCTCCTCTCTCTCAATNGAGAAGAATTCGTTGCTATGAGAGA
CGTCTTACCAATGTTACAACCAGATGACCTCATTATCGATGGATGGGACA
TCTCCTCTCTCTCAATAACTGATGCCATGCAACGGGCTGAAGTCTTTGAT
TTCGACCTCCAACGAAAACTTGCTCCATACATGAACGACATGAAACCAAG
ACCTGCCGTCTATCGTCCAGACTTCATCGCAGCAAACCAATCGGACCGCG
CGGACAATGTCGTGCTTGGATCGGCCGAACAACAAATGACCACCATCCGC
AAGGATATCCGTGACTTCAAGGAGAAGAACAAACTGGATAAGGTGATCGT
GTTATGGACAGCAAACACTGAACGATTCTGTGACGTCATCCCTGGTGTTC
ATGACACTGCAGAAAACATCTTGGATGCCATCAAACGTGATGAAATTGAA
ATCTCAGCTTCATCAATCTACGCCTTGGCAAGTATTCTGGAAGGTTGCGC
GTACATCAATGGATCTCCACAGAACACCTTTGTTCCTGGTGTTATTCAAC
TGGCTGAAGAACGTAATGTTTTCCTCGGTGGTGACGACTTCAAATCTGGT
CAAACGAAAATCAAATCAGTACTGGTCGACTTTTTGGTTGGTGCAGGCAT
CAAACCAGTCTCGATTGCCAGTTACAACCACCTTGGAAACAACGATGGAA
AAAATCTCTCAGCACCAAAACAATTCCGTTCCAAAGAGATCTCCAAGAGC
AATGTCGTTGATGACATGGTTGAATCCAATCGTATCTTGTACAAAGAAGG
TGAAAAGCCGGATCATGTCGTCGTCATCAAGTACGTACCGACCGTCGCCG
ACAGTAAACGAGCGCTAGACGAATACACGTCCGAAATCATGATGCATGGT
ACGAACACCATCGTCCTTCATAACACCTGTGAAGACTCGCTTCTCGCGAC
ACCCATCATTCTTGATCTCGTCCTCTTAACCGAATTATGTCAACGAATCA
AAATGCGAGTAGGTACAGGTGAATATCAAACCTTCAATTCAGTTTTATCG
CTACTTTCTTACCTGTTGAAAGCTCCACTTGTCCCAAAAGGCACACCAGT
CGTTAACGCTCTCTTCAAGCAACGGTCTGCTATTGAAAACATTCTAAGAG
CTTGCCTAGCCTTACCTCCACAAAACCATATGACTTTGGAACACAAGCTT
ATGGACATGCAATCAGTTTACAATGAGATGAAGCCACAAGCTCTTATTTC
TTCAGACAAGAAAGGAGAACTGAACGAAAAATCATCACCACCAATGCGAA
CCAAATTAACGAACGGACATACAAACACACAGAAAGAAATTTCTATcatt
taa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016538-exon-sc0000241-1491911889:275699..278690 | TCONS_00016538-exon-sc0000241-1491911889:275699..278690 | Clytia hemisphaerica | exon |
| TCONS_00016538-exon-sc0000241-1510915933:275699..278690 | TCONS_00016538-exon-sc0000241-1510915933:275699..278690 | Clytia hemisphaerica | exon |
| TCONS_00016538-exon-sc0000241-1575043694:275699..278690 | TCONS_00016538-exon-sc0000241-1575043694:275699..278690 | Clytia hemisphaerica | exon |
| TCONS_00016538-exon-sc0000241-1491911889:281738..284097 | TCONS_00016538-exon-sc0000241-1491911889:281738..284097 | Clytia hemisphaerica | exon |
| TCONS_00016538-exon-sc0000241-1510915933:281738..284097 | TCONS_00016538-exon-sc0000241-1510915933:281738..284097 | Clytia hemisphaerica | exon |
| TCONS_00016538-exon-sc0000241-1575043694:281738..284097 | TCONS_00016538-exon-sc0000241-1575043694:281738..284097 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000241 | supercontig | sc0000241:275699..284097 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004512 | inositol-3-phosphate synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008654 | phospholipid biosynthetic process |
| GO:0006021 | inositol biosynthetic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006021 |
inositol biosynthetic process |
| biological_process |
GO:0008654 |
phospholipid biosynthetic process |
| molecular_function |
GO:0004512 |
inositol-3-phosphate synthase activity |
Blast
BLAST of TCONS_00016538 vs. Swiss-Prot (Human)
Match: INO1 (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1) HSP 1 Score: 536.184 bits (1380), Expect = 7.001e-172 Identity = 271/434 (62.44%), Postives = 329/434 (75.81%), Query Frame = 2
Query: 3428 EEFVAMRDVLPMLQPDDLIIDGWDISSLSITDAMQRAEVFDFDLQRKLAPYMNDMKPRPAVYRPDFIAANQSDRADNVVLGSAEQQMTTIRKDIRDFKEKNKLDKVIVLWTANTERFCDVIPGVHDTAENILDAIKRDXXXXXXXXXXXXXXXXXGCAYINGSPQNTFVPGVIQLAEERNVFLGGDDFKSGQTKIKSVLVDFLVGAGIKPVSIASYNHLGNNDGKNLSAPKQFRSKEISKSNVVDDMVESNRILYKEGEKPDHVVVIKYVPTVADSKRALDEYTSEIMMHGTNTIVLHNTCEDSLLATPIILDLVLLTELCQRIKMRVGTG-EYQTFNXXXXXXXXXXKAPLVPKGTPVVNALFKQRSAIENILRACLALPPQNHMTLEHKLMDMQSVYNEMKPQALISSDKKGELNEKSSPPMRTKLTNGHTN 4726
E FV VLPM+ P+DL+ DGWDISSL++ +AM+RA+V D+ LQ +L P+M ++PRP+VY P+FIAANQS RADN++ GS QQ+ IR+DIRDF+ LDKVIVLWTANTERFC+VIPG++DTAEN+L I+ ++ + + GCA++NGSPQNT VPG ++LA + VF+GGDDFKSGQTK+KSVLVDFL+G+G+K +SI SYNHLGNNDG+NLSAP QFRSKE+SKSNVVDDMV+SN +LY GE+PDH VVIKYVP V DSKRALDEYTSE+M+ GTNT+VLHNTCEDSLLA PI+LDL LLTELCQR+ E QTF+ VLSLLS+L KAPLVP G+PVVNALF+QRS IENILRAC+ LPPQNHM LEHK+ + P A LN+K P T G N
Sbjct: 118 EVFVPFSAVLPMVAPNDLVFDGWDISSLNLAEAMRRAKVLDWGLQEQLWPHMEALRPRPSVYIPEFIAANQSARADNLIPGSRAQQLEQIRRDIRDFRSSAGLDKVIVLWTANTERFCEVIPGLNDTAENLLRTIELGLEVSPSTLFAVASILE-GCAFLNGSPQNTLVPGALELAWQHRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYTPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHKMERPGPSLKRVGPVAATYP----MLNKKGPVPAATNGCTGDAN 546 HSP 2 Score: 112.849 bits (281), Expect = 2.485e-25 Identity = 67/135 (49.63%), Postives = 91/135 (67.41%), Query Frame = 3
Query: 3009 VNSCNVEYTSDEIQSKYIYQTTKVERPTPQRITVTPVDVEVKFKVQRHVPKVGVMLVXXXXXXXXXXXXAYLANKHNISWNTKSGEKQPNWFGSLLQSSTVSLGFSEQGEE-FVAMRDVLPMLQPDDLIIDGWDI 3410
V S +V Y + I+++Y Y+TT+V R + V P F+ R VP++GVMLVGWGGNNG+T T A LAN+ +SW T+SG K+ N++GSL Q+ TVSLG +G+E FV VLPM+ P+DL+ DGWDI
Sbjct: 9 VESPDVVYGPEAIEAQYEYRTTRVSREG-GVLKVHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSAVLPMVAPNDLVFDGWDI 142
The following BLAST results are available for this feature:
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