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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016649 ID=TCONS_00016649|Name=TCONS_00016649|organism=Clytia hemisphaerica|type=transcript|length=1191bp
ttatttttgGAAGGTTTCATTTCGAAGCCAAATCTAGGAAGAGATTTTTG
TGTTTGTGTAAAGCTTGTATGTTTGACACTTGTGTGCAGGCTAAGAGCAG
TGGTTCTACACACGAAGGTATTAGAAGTTCCAATGTTGATATTTCTACTG
GTTTTGTTTGCAGCATTTATCATAGCCGACACTGAAGGCTACAATGGATG
TATAGGAACAGATTTGAAGATTCATCGGGCTGGAGAAAcattcgatgaaa
tttacaaGCCAGAGATTAGAGAATGTTCAGGAAAATTGTGTGGTGAAAAT
GGTCAGATAACATTTTGGATTGagaaaaattgtaaaacaaaaacaagtaa
CAAACGCGTTCTTAATGATTATTTGGTCATTTTGATTTCTGCTGGTTGTA
TTTTTGTGTTTATGTTGGTTTGCCTTGTGTTCATTTTGTATCATCGCAAA
TGTAGAACACCGATCAACAATGAGACCGACCACGATAAAGCTGCATTGGT
GATTGGGAATCCGTACATTGTTCATGGTGCTTGAAGTGACCATAGCAACA
AAAGTCTTTATTTGAAATGGTATCGTCTATCGTTTTAAACCAAAGAAGAC
TTTGTTTCGCAGGTCCCGATAGGGTAAATCTTACaaacatttttcatatt
ttaaatATTCAACTGTACATACTATAAACTTTAAGTgacgattttcattt
tttcatataTCAATTTATCAAGAGTACAAAGCCTTCCCCAAGAGTACTGA
CCTAGCAGCTTGGAAAGAAAGAAAGTCTACGCGGGATTCaaaatttcaga
agaaaaaagacCAACCAAGGAGACCAAGGAGATCATCAATTTCTTATTTA
CGTATTTTCTTCCGTTGCTTTATGCATTGTTTAATAGCTCTGTCCAATTA
TAGTGCCTGGTTTACTTTTCGAGTCCCAGAATAgaggattttcaaatttc
attatCAAATGTTATTATAAGATGCCCAGAACTATACTTTTTGTGATATG
GTTCTTCGGACTTCGAAAGTATCTGTAAAAAATCCAAAGCAGTGTAACAA
CACCatcaaaagaaaacattaaaatgTTGTTAAAAAGTCGACtatttttt
gtcaacttttggTATTTGCCAAGGGATATTtaaattactctccatgaatc
tCTGTACTGTAATAACAATTcaggaaataaaaaaagaaaaa Run BLAST on NCBI protein sequence of TCONS_00016649-protein >TCONS_00016649-protein ID=TCONS_00016649-protein|Name=TCONS_00016649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
LFLEGFISKPNLGRDFCVCVKLVCLTLVCRLRAVVLHTKVLEVPMLIFLL
VLFAAFIIADTEGYNGCIGTDLKIHRAGETFDEIYKPEIRECSGKLCGEN
GQITFWIEKNCKTKTSNKRVLNDYLVILISAGCIFVFMLVCLVFILYHRK
CRTPINNETDHDKAALVIGNPYIVHGA Run BLAST on NCBI transcript from alignment at sc0000246:264235..265457+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016649 ID=TCONS_00016649|Name=TCONS_00016649|organism=Clytia hemisphaerica|type=transcript|length=1223bp|location=Sequence derived from alignment at sc0000246:264235..265457+ (Clytia hemisphaerica)
ttatttttgGAAGGTTTCATTTCGAAGCCAAATCTAGGAAGAGATTTTTG
TGTTTGTGTAAAGCTTGTATGTTTGACACTTGTGTGCAGGCTAAGAGCAG
TGGTTCTACACACGAAGGTATTAGAAGTTCCATAATATAAGATTAACAGA
ATATAGTGGTTACAATGTTGATATTTCTACTGGTTTTGTTTGCAGCATTT
ATCATAGCCGACACTGAAGGCTACAATGGATGTATAGGAACAGATTTGAA
GATTCATCGGGCTGGAGAAAcattcgatgaaatttacaaGCCAGAGATTA
GAGAATGTTCAGGAAAATTGTGTGGTGAAAATGGTCAGATAACATTTTGG
ATTGagaaaaattgtaaaacaaaaacaagtaaCAAACGCGTTCTTAATGA
TTATTTGGTCATTTTGATTTCTGCTGGTTGTATTTTTGTGTTTATGTTGG
TTTGCCTTGTGTTCATTTTGTATCATCGCAAATGTAGAACACCGATCAAC
AATGAGACCGACCACGATAAAGCTGCATTGGTGATTGGGAATCCGTACAT
TGTTCATGGTGCTTGAAGTGACCATAGCAACAAAAGTCTTTATTTGAAAT
GGTATCGTCTATCGTTTTAAACCAAAGAAGACTTTGTTTCGCAGGTCCCG
ATAGGGTAAATCTTACaaacatttttcatattttaaatATTCAACTGTAC
ATACTATAAACTTTAAGTgacgattttcattttttcatataTCAATTTAT
CAAGAGTACAAAGCCTTCCCCAAGAGTACTGACCTAGCAGCTTGGAAAGA
AAGAAAGTCTACGCGGGATTCaaaatttcagaagaaaaaagacCAACCAA
GGAGACCAAGGAGATCATCAATTTCTTATTTACGTATTTTCTTCCGTTGC
TTTATGCATTGTTTAATAGCTCTGTCCAATTATAGTGCCTGGTTTACTTT
TCGAGTCCCAGAATAgaggattttcaaatttcattatCAAATGTTATTAT
AAGATGCCCAGAACTATACTTTTTGTGATATGGTTCTTCGGACTTCGAAA
GTATCTGTAAAAAATCCAAAGCAGTGTAACAACACCatcaaaagaaaaca
ttaaaatgTTGTTAAAAAGTCGACtattttttgtcaacttttggTATTTG
CCAAGGGATATTtaaattactctccatgaatctCTGTACTGTAATAACAA
TTcaggaaataaaaaaagaaaaa Coding sequence (CDS) from alignment at sc0000246:264235..265457+ >TCONS_00016649 ID=TCONS_00016649|Name=TCONS_00016649|organism=Clytia hemisphaerica|type=CDS|length=1068bp|location=Sequence derived from alignment at sc0000246:264235..265457+ (Clytia hemisphaerica)
ttatttttgGAAGGTTTCATTTCGAAGCCAAATCTAGGAAGAGATTTTTG
TGTTTGTGTAAAGCTTGTATGTTTGACACTTGTGTGCAGGCTAAGAGCAG
TGGTTCTACACACGAAGGTATTAGAAGTTCCAATGTTGATATTTCTACTG
GTTTTGTTTGCAGCATTTATCATAGCCGACACTGAAGGCTACAATGGATG
TATAGGAACAGATTTGAAGATTCATCGGGCTGGAGAAAcattcgatgaaa
tttacaaGCCAGAGATTAGAGAATGTTCAGGAAAATTGTGTGGTGAAAAT
GGTCAGATAACATTTTGGATTGagaaaaattgtaaaacaaaaacaagtaa
CAAACGCGTTCTTAATGATTATTTGGTCATTTTGATTTCTGCTGGTTGTA
TTTTTGTGTTTATGTTGGTTTGCCTTGTGTTCATTTTGTATCATCGCAAA
TGTAGAACACCGATCAACAATGAGACCGACCACGATAAAGCTGCATTGGT
GATTGGGAATCCGTACATTGTTCATGGTGCTTGAttatttttgGAAGGTT
TCATTTCGAAGCCAAATCTAGGAAGAGATTTTTGTGTTTGTGTAAAGCTT
GTATGTTTGACACTTGTGTGCAGGCTAAGAGCAGTGGTTCTACACACGAA
GGTATTAGAAGTTCCAATGTTGATATTTCTACTGGTTTTGTTTGCAGCAT
TTATCATAGCCGACACTGAAGGCTACAATGGATGTATAGGAACAGATTTG
AAGATTCATCGGGCTGGAGAAAcattcgatgaaatttacaaGCCAGAGAT
TAGAGAATGTTCAGGAAAATTGTGTGGTGAAAATGGTCAGATAACATTTT
GGATTGagaaaaattgtaaaacaaaaacaagtaaCAAACGCGTTCTTAAT
GATTATTTGGTCATTTTGATTTCTGCTGGTTGTATTTTTGTGTTTATGTT
GGTTTGCCTTGTGTTCATTTTGTATCATCGCAAATGTAGAACACCGATCA
ACAATGAGACCGACCACGATAAAGCTGCATTGGTGATTGGGAATCCGTAC
ATTGTTCATGGTGCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016649-exon-sc0000246-1491911889:264235..264365 | TCONS_00016649-exon-sc0000246-1491911889:264235..264365 | Clytia hemisphaerica | exon |
| TCONS_00016649-exon-sc0000246-1510915933:264235..264365 | TCONS_00016649-exon-sc0000246-1510915933:264235..264365 | Clytia hemisphaerica | exon |
| TCONS_00016649-exon-sc0000246-1575043694:264235..264365 | TCONS_00016649-exon-sc0000246-1575043694:264235..264365 | Clytia hemisphaerica | exon |
| TCONS_00016649-exon-sc0000246-1491911889:264398..265457 | TCONS_00016649-exon-sc0000246-1491911889:264398..265457 | Clytia hemisphaerica | exon |
| TCONS_00016649-exon-sc0000246-1510915933:264398..265457 | TCONS_00016649-exon-sc0000246-1510915933:264398..265457 | Clytia hemisphaerica | exon |
| TCONS_00016649-exon-sc0000246-1575043694:264398..265457 | TCONS_00016649-exon-sc0000246-1575043694:264398..265457 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000246 | supercontig | sc0000246:264235..265457 + |
Blast
The following BLAST results are available for this feature:
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